Spreadsheet: 6866cddc-1ccb-4e13-abba-fa8e46f0a17e
Sheet: Unique SNPs, Sorted by Locus

Accession Number of Reference | Mutation Start | Mutation End | [NAME] | [NAME] | # Reads | % Reads Different | Query Strain | Annotation | Mutation ID
>gi|16082781|ref|NC_003134.1 | 87112 | 87112 | - | G | 15 | 1 | BA200901703 | integrase | 1
>gi|16120353|ref|NC_003143.1 | 195074 | 195074 | G | A | 13 | 1 | AS200901156 | [NAME] | 2
>gi|16120353|ref|NC_003143.1 | 195074 | 195074 | G | A | 13 | 0.92 | BA200901703 |  | 2
>gi|16120353|ref|NC_003143.1 | 284552 | 284552 | G | - | 12 | 1 | AS200901434 | hmuR - hemin receptor precursor | 3
>gi|16120353|ref|NC_003143.1 | 284552 | 284552 | G | - | 22 | 1 | AS200901509 |  | 3
>gi|16120353|ref|NC_003143.1 | 284552 | 284552 | G | - | 17 | 0.94 | AS200902147 |  | 3
>gi|16120353|ref|NC_003143.1 | 341011 | 341011 | C | T | 20 | 1 | BA200901990 | intergenic - ypo0331-rhaS, possible promoter region | 4
>gi|16120353|ref|NC_003143.1 | 341011 | 341011 | C | T | 12 | 1 | BA200902009 |  | 4
>gi|16120353|ref|NC_003143.1 | 666671 | 666671 | C | A | 13 | 0.92 | AS200901539 | intergenic | 5
>gi|16120353|ref|NC_003143.1 | 669885 | 669885 | C | T | 18 | 1 | BA200901990 | ypo0610 | 6
>gi|16120353|ref|NC_003143.1 | 669885 | 669885 | C | T | 11 | 1 | BA200902009 |  | 6
>gi|16120353|ref|NC_003143.1 | 681456 | 681456 | T | A | 14 | 1 | AS200901434 |  | 7
>gi|16120353|ref|NC_003143.1 | 681456 | 681456 | T | A | 9 | 1 | AS200901509 |  | 7
>gi|16120353|ref|NC_003143.1 | 681456 | 681456 | T | A | 12 | 1 | AS200902147 |  | 7
>gi|16120353|ref|NC_003143.1 | 707246 | 707246 | G | T | 17 | 1 | AS200901434 | Unique but hits many places | 8
>gi|16120353|ref|NC_003143.1 | 707246 | 707246 | G | T | 21 | 1 | AS200901509 |  | 8
>gi|16120353|ref|NC_003143.1 | 707246 | 707246 | G | T | 9 | 1 | AS200902147 |  | 8
>gi|16120353|ref|NC_003143.1 | 961274 | 961276 | TGA | - | 13 | 1 | AS200901539 |  | 9
>gi|16120353|ref|NC_003143.1 | 961273 | 961276 | TTGA | - | 27 | 0.96 | BA200901990 | intergenic | 9
>gi|16120353|ref|NC_003143.1 | 961273 | 961276 | TTGA | - | 17 | 1 | BA200902009 |  | 9
>gi|16120353|ref|NC_003143.1 | 1072960 | 1072960 | G | A | 22 | 1 | AS200901434 | ypo0969 - hypothetical protein | 10
>gi|16120353|ref|NC_003143.1 | 1072960 | 1072960 | G | A | 21 | 1 | AS200901509 |  | 10
>gi|16120353|ref|NC_003143.1 | 1072960 | 1072960 | G | A | 15 | 1 | AS200902147 |  | 10
>gi|16120353|ref|NC_003143.1 | 1288717 | 1288717 | C | A | 25 | 1 | BA200901990 | modF putative molybdenum transport protein | 11
>gi|16120353|ref|NC_003143.1 | 1288717 | 1288717 | C | A | 15 | 1 | BA200902009 |  | 11
>gi|16120353|ref|NC_003143.1 | 1336811 | 1336811 | C | T | 15 | 1 | AS200901434 | [NAME] putative substrate binding periplasmic protein | 12
>gi|16120353|ref|NC_003143.1 | 1336811 | 1336811 | C | T | 18 | 1 | AS200901509 |  | 12
>gi|16120353|ref|NC_003143.1 | 1336811 | 1336811 | C | T | 11 | 1 | AS200902147 |  | 12
>gi|16120353|ref|NC_003143.1 | 1391153 | 1391153 | C | T | 15 | 1 | AS200901156 | unannotated ORF, | 13
>gi|16120353|ref|NC_003143.1 | 1391153 | 1391153 | C | T | 13 | 1 | AS200901434 |  | 13
>gi|16120353|ref|NC_003143.1 | 1391153 | 1391153 | C | T | 12 | 1 | AS200901509 |  | 13
>gi|16120353|ref|NC_003143.1 | 1391153 | 1391153 | C | T | 13 | 1 | AS200901539 |  | 13
>gi|16120353|ref|NC_003143.1 | 1391153 | 1391153 | C | T | 7 | 1 | BA200901703 |  | 13
>gi|16120353|ref|NC_003143.1 | 1391153 | 1391153 | C | T | 29 | 1 | BA200901990 |  | 13
>gi|16120353|ref|NC_003143.1 | 1391153 | 1391153 | C | T | 19 | 1 | BA200902009 |  | 13
>gi|16120353|ref|NC_003143.1 | 1391153 | 1391153 | C | T | 17 | 1 | AS200902147 |  | 13
>gi|16120353|ref|NC_003143.1 | 1558606 | 1558606 | C | T | 12 | 1 | AS200901434 | pfl - pyruvate formate acetyltransferase | 14
>gi|16120353|ref|NC_003143.1 | 1558606 | 1558606 | C | T | 16 | 1 | AS200901509 |  | 14
>gi|16120353|ref|NC_003143.1 | 1558606 | 1558606 | C | T | 17 | 1 | AS200902147 |  | 14
>gi|16120353|ref|NC_003143.1 | 1564799 | 1564799 | C | T | 20 | 1 | AS200901434 | ansB - L-asparaginase II | 15
>gi|16120353|ref|NC_003143.1 | 1564799 | 1564799 | C | T | 13 | 1 | AS200901509 |  | 15
>gi|16120353|ref|NC_003143.1 | 1564799 | 1564799 | C | T | 11 | 1 | AS200902147 |  | 15
>gi|16120353|ref|NC_003143.1 | 1738860 | 1738860 | T | A | 10 | 1 | AS200901539 | Ferric iron reductase protein FhuF | 16
>gi|16120353|ref|NC_003143.1 | 1878012 | 1878012 | C | A | 25 | 1 | BA200901990 | ylaC - hypothetical protein | 17
>gi|16120353|ref|NC_003143.1 | 1878012 | 1878012 | C | A | 10 | 1 | BA200902009 |  | 17
>gi|16120353|ref|NC_003143.1 | 1885569 | 1885569 | - | CCAA | 18 | 1 | BA200901990 | cheM, repeat expansion | 18
>gi|16120353|ref|NC_003143.1 | 1885569 | 1885569 | - | CCAA | 15 | 0.93 | BA200902009 |  | 18
>gi|16120353|ref|NC_003143.1 | 1971625 | 1971625 | C | T | 15 | 1 | AS200901156 | intergenic | 19
>gi|16120353|ref|NC_003143.1 | 1971625 | 1971625 | C | T | 9 | 1 | AS200901434 |  | 19
>gi|16120353|ref|NC_003143.1 | 1971625 | 1971625 | C | T | 11 | 1 | AS200901509 |  | 19
>gi|16120353|ref|NC_003143.1 | 1971625 | 1971625 | C | T | 12 | 1 | AS200901539 |  | 19
>gi|16120353|ref|NC_003143.1 | 1971625 | 1971625 | C | T | 12 | 1 | BA200901703 |  | 19
>gi|16120353|ref|NC_003143.1 | 1971625 | 1971625 | C | T | 25 | 0.96 | BA200901990 |  | 19
>gi|16120353|ref|NC_003143.1 | 1971625 | 1971625 | C | T | 11 | 0.91 | BA200902009 |  | 19
>gi|16120353|ref|NC_003143.1 | 1971625 | 1971625 | C | T | 9 | 1 | AS200902147 |  | 19
>gi|16120353|ref|NC_003143.1 | 2060795 | 2060795 | C | A | 24 | 0.96 | AS200901156 | YPO1813 - putative sugar binding periplasmic protein | 20
>gi|16120353|ref|NC_003143.1 | 2060795 | 2060795 | C | A | 17 | 0.94 | AS200901434 |  | 20
>gi|16120353|ref|NC_003143.1 | 2060795 | 2060795 | C | A | 8 | 0.87 | AS200901509 |  | 20
>gi|16120353|ref|NC_003143.1 | 2060795 | 2060795 | C | A | 14 | 0.93 | AS200901539 |  | 20
>gi|16120353|ref|NC_003143.1 | 2060795 | 2060795 | C | A | 9 | 1 | BA200901703 |  | 20
>gi|16120353|ref|NC_003143.1 | 2060795 | 2060795 | C | A | 21 | 1 | BA200901990 |  | 20
>gi|16120353|ref|NC_003143.1 | 2060795 | 2060795 | C | A | 12 | 0.92 | BA200902009 |  | 20
>gi|16120353|ref|NC_003143.1 | 2060795 | 2060795 | C | A | 16 | 0.81 | AS200902147 |  | 20
>gi|16120353|ref|NC_003143.1 | 2184694 | 2184694 | C | A | 18 | 1 | BA200901990 | YPO1926 - putative 4-hydroxybutyrate coenzyme A transferase | 21
>gi|16120353|ref|NC_003143.1 | 2184694 | 2184694 | C | A | 15 | 1 | BA200902009 |  | 21
>gi|16120353|ref|NC_003143.1 | 2238568 | 2238568 | A | - | 11 | 1 | AS200901434 |  | 22
>gi|16120353|ref|NC_003143.1 | 2238568 | 2238568 | A | - | 9 | 1 | AS200901509 |  | 22
>gi|16120353|ref|NC_003143.1 | 2238568 | 2238568 | A | - | 18 | 1 | BA200901990 |  | 22
>gi|16120353|ref|NC_003143.1 | 2238568 | 2238568 | A | C | 10 | 0.8 | BA200902009 |  | 22
>gi|16120353|ref|NC_003143.1 | 2285006 | 2285006 | C | T | 12 | 0.83 | AS200901539 | ribose phosphate phsophokinase | 23
>gi|16120353|ref|NC_003143.1 | 2418892 | 2418892 | A | G | 7 | 1 | BA200901703 | ypo2149 - hypothetical | 24
>gi|16120353|ref|NC_003143.1 | 2450171 | 2450171 | T | C | 13 | 1 | AS200901434 | near IS element - possible rearrangement? | 25
>gi|16120353|ref|NC_003143.1 | 2450171 | 2450171 | T | C | 17 | 1 | AS200901509 |  | 25
>gi|16120353|ref|NC_003143.1 | 2450171 | 2450171 | T | C | 17 | 1 | AS200902147 |  | 25
>gi|16120353|ref|NC_003143.1 | 2594121 | 2594121 | C | A | 15 | 1 | AS200901539 | YPO2306 - putative amino acid transporter | 26
>gi|16120353|ref|NC_003143.1 | 2635664 | 2635664 | G | A | 25 | 1 | BA200901799 | YPO2341 - putative mandelate racemase/muconate | 27
>gi|16120353|ref|NC_003143.1 | 2645036 | 2645036 | A | G | 12 | 1 | AS200901434 | putative mandelate racemase / muconate lactonizing protein | 28
>gi|16120353|ref|NC_003143.1 | 2645036 | 2645036 | A | G | 13 | 1 | AS200901509 |  | 28
>gi|16120353|ref|NC_003143.1 | 2645036 | 2645036 | A | G | 12 | 1 | AS200902147 |  | 28
>gi|16120353|ref|NC_003143.1 | 2842886 | 2842886 | G | A | 23 | 1 | AS200901156 | edd - phosphogluconate dehydratase | 29
>gi|16120353|ref|NC_003143.1 | 2842886 | 2842886 | G | A | 12 | 1 | BA200901703 |  | 29
>gi|16120353|ref|NC_003143.1 | 2871000 | 2871000 | G | A | 22 | 1 | AS200901539 | intergenic | 30
>gi|16120353|ref|NC_003143.1 | 2916182 | 2916182 | - | TATCACCAAC | 12 | 0.83 | AS200901509 | intergenic | 31
>gi|16120353|ref|NC_003143.1 | 3224054 | 3224054 | G | A | 23 | 1 | BA200901799 | yapA - putative autotransporter protein | 32
>gi|16120353|ref|NC_003143.1 | 3229957 | 3229957 | G | C | 10 | 1 | AS200901434 | yapB | 33
>gi|16120353|ref|NC_003143.1 | 3229957 | 3229957 | G | C | 11 | 1 | AS200901509 |  | 33
>gi|16120353|ref|NC_003143.1 | 3229957 | 3229957 | G | C | 7 | 1 | AS200902147 |  | 33
>gi|16120353|ref|NC_003143.1 | 3348820 | 3348820 | A | - | 13 | 1 | AS200901434 | YPO2998 putative 2-component system response regulator | 34
>gi|16120353|ref|NC_003143.1 | 3348820 | 3348820 | A | - | 18 | 1 | AS200901509 |  | 34
>gi|16120353|ref|NC_003143.1 | 3348820 | 3348820 | A | - | 11 | 1 | AS200902147 |  | 34
>gi|16120353|ref|NC_003143.1 | 3406528 | 3406528 | G | A | 14 | 1 | AS200901434 | YPO 3049putative binding protein-dependent transport system, inner-membrane component | 35
>gi|16120353|ref|NC_003143.1 | 3406528 | 3406528 | G | A | 15 | 1 | AS200901509 |  | 35
>gi|16120353|ref|NC_003143.1 | 3406528 | 3406528 | G | A | 19 | 1 | BA200901990 |  | 35
>gi|16120353|ref|NC_003143.1 | 3406528 | 3406528 | G | A | 17 | 1 | BA200902009 |  | 35
>gi|16120353|ref|NC_003143.1 | 3406528 | 3406528 | G | A | 12 | 1 | AS200902147 |  | 35
>gi|16120353|ref|NC_003143.1 | 3478912 | 3478912 | G | A | 12 | 1 | AS200901434 | dnaX - DNA pol III subunits gamma & tau | 36
>gi|16120353|ref|NC_003143.1 | 3478912 | 3478912 | G | A | 10 | 1 | AS200901509 |  | 36
>gi|16120353|ref|NC_003143.1 | 3478912 | 3478912 | G | A | 9 | 1 | AS200902147 |  | 36
>gi|16120353|ref|NC_003143.1 | 3479165 | 3479165 | C | T | 15 | 1 | AS200901539 | dnaX - DNA pol III subunits gamma & tau | 37
>gi|16120353|ref|NC_003143.1 | 3588680 | 3588680 | G | A | 17 | 1 | AS200901539 | frsA - fermentation/respiration switch protein | 38
>gi|16120353|ref|NC_003143.1 | 4081854 | 4081854 | G | T | 17 | 1 | AS200901434 | putative sulfite oxidase subunit YedZ | 39
>gi|16120353|ref|NC_003143.1 | 4081854 | 4081854 | G | T | 13 | 1 | AS200901509 |  | 39
>gi|16120353|ref|NC_003143.1 | 4081854 | 4081854 | G | T | 15 | 1 | AS200902147 |  | 39