Spreadsheet: 4d3ddbaa-66b0-4b26-b5f3-518158064ef9
Sheet: Sheet1

Unnamed: 0 | Unnamed: 1 | Unnamed: 2 | Unnamed: 3 | Unnamed: 4 | Unnamed: 5 | Unnamed: 6 | Unnamed: 7 | Unnamed: 8 | PROTEIN FOUND IN PREVIOUS COMPUTATIONAL GENOMICS STUDIES | Unnamed: 10 | PROTEIN FOUND IN PREVIOUS PROTEOMICS STUDIES | Unnamed: 12 | Unnamed: 13 | PROTEIN SEEN IN PREVIOUS EXPRESSION STUDIES | Unnamed: 15 | Unnamed: 16
JGI v3 protein ID | Protein family (cluster) ID | Chlamy-domonas gene name | JGI Chlamydomonas browser defline | Manual annotation of molecular function | Protein associated with human disease + symptoms | Protein known to be in flagella (literature curation) | Protein known to be in BB (literature curation) | Expressed (JGI v3 frozen [NAME]) | Avidor-Reiss (via ciliome) | Li & Dutcher (via ciliome) | Chlamy Flagellar Proteome (High Confidence) | Human epithelial flagella (Ostrowki via ciliome) | Tetrahymena cilia (Smith via ciliome) | Upregulated after Deflagellation ([NAME], microarray) | Enriched in Mouse testis NOT sertoli cells ([NAME], SAGE) | Enriched in mouse testis(M) vs somatic (SAGE data)
Proteins in CiliaCut, but neither CentricCut nor MotileCut
24475 | 5705258 |  | (ARL6a ,  BBS3B) Most similar to mammalian ARL6, causative gene for Bardet-Biedl syndrome 3, member of the ARF/Sar1 GTPase family. The C. elegans ARL6 undergoes intraflagellar transport. Two ARL6 paralogs in Chlamydomonas (see ARL6b). | GTP-Binding | BBS | Y |  | Y | Y |  |  |  |  | Y
189076 | 5706101 | FAP47 |  | No data |  | Y |  | Y |  | Y | Y |  |  | Y
140113 | 5706980 | BBS8 | Tetratricopeptide repeat protein 8 (Bardet-Bield syndrome 8) similarity | Protein-protein interraction | BBS | Y |  | Y | Y | Y
130394 | 5708472 | D1bLIC | Cytoplasmic dynein 1b light intermediate chain (homologue of mammalian D2LIC/LIC3), the retrograde motor for intraflagellar transport. | Flagellar transport | BBS | Y |  | Y |  | Y | Y |  |  | Y
190054 | 5709103 | BBS7 | Simlar to Bardet-Biedl syndrome 7 | No data | BBS | Y |  | Y |  | Y
101137 | 5709290 | BBS9 | Bardet-Biedl syndrome 9 | No data | BBS |  |  |  |  | Y
182299 | 5709609 | [NAME] | Similar to Bardet-Biedl syndrome 5 | No data | BBS, [NAME] retraction syndrome 2 | Y |  | Y | Y | Y |  |  |  | Y
185788 | 5709716 | UNC119 | Signal transduction protein | Trafficking | Bone mineral density variability 3 |  | Y | Y | Y | Y
98915 | 5709897 | FBB17 |  | Protein metabolism |  |  |  |  | Y | Y
126758 | 5711323 | BBS2 |  | No data | BBS, C8 deficiency, type I | Y |  | Y |  | Y
192205 | 5705047 | IFT140 | Intraflagellar transport particle protein IFT140 | Flagellar transport | 1p36 deletion syndrome; Bone mineral density variability 3 | Y |  | Y |  | Y | Y |  |  | Y
182072 | 5705822 | IFT20 | Intraflagellar transport particle protein 20 | Flagellar transport | Bone mineral density variability 3 | Y |  | Y | Y |  | Y |  |  | Y
143468 | 5706244 | FAP66 |  | Protein-protein interraction |  | Y |  | Y | Y | Y | Y |  |  | Y
183240 | 5708965 | IFT172 | Intraflagellar transport protein 172 | Flagellar transport |  | Y |  | Y | Y | Y | Y | Y |  | Y
195385 | 5709351 | FAP118 | (FBB1)  In the flagellar basal body proteome as FBB1 | Protein-protein interraction |  | Y |  | Y | Y | Y | Y |  |  | Y
24171 | 5709540 | IFT80 | Intraflagellar transport particle protein 80 | Flagellar transport |  | Y |  | Y | Y | Y | Y | Y |  | Y
81760 | 5709994 | DYF13 | (FBB2)  [NAME] to protein required for ciliogenesis in C. elegans. | Protein-protein interraction | Thromboxane synthase deficiency | Y |  | Y | Y | Y |  | Y |  | Y
126867 | 5710863 | FAP60 |  | Protein-protein interraction |  | Y |  | Y |  | Y | Y |  |  | Y
195877 | 5708672 | FAP9 | Ortholog RABL5 in human, member of the [NAME] superfamily of GTPases but the GTP-specificity motif abrogated (ATPase?). | GTP-Binding |  | Y |  |  |  | Y |  | Y |  |  | Y | Y
194946 | 5710084 | PTP1 | Putative Protein Tyrosine Phosphatase 1; Dephosphorylates phosphotyrosine residues | Signalling |  |  |  | Y |  | Y |  |  |  |  | Y | Y
102300 | 5706231 | SSA1 |  | Signalling |  | Y |  |  |  |  | Y |  |  | Y
150669 | 5706961 | SSA2 |  | Protein metabolism |  |  |  |  |  | Y
150490 | 5709110 | SSA3 | Contains an engulfement and cell motility, ELM, domain (IPR006816) found in a number of eukaryotic proteins involved in the cytoskeletal rearrangements required for phagocytosis of apoptotic cells and cell motility. | Unclear |  |  |  |  |  | Y
107835 | 5709188 | SSA4 |  | No data | Deafness, autosomal dominant 2 |  |  |  | Y | Y |  |  |  |  | Y | Y
176942 | 5709323 | SSA5 |  | Signalling |  |  |  |  | new gene model in v3
176788 | 5709889 | SSA6 |  | No data |  |  |  |  | new gene model in v3
180447 | 5709065 | SSA7 |  | Protein-protein interraction |  |  |  |  | new gene model in v3
95290 | 5709079 | SSA8 |  | Metabolism |  |  |  |  |  | Y
172167 | 5707709 | SSA9 |  | RNA metabolism |  |  |  |  | new gene model in v3
172866 | 5709515 | SSA10 | Similar to copper type II, ascorbate-dependent monooxygenase ,  similar to dopamine beta-monooxygenase | Metabolism | Amyotrophic lateral sclerosis-4, juvenile dominant |  |  |  | Y | Y
118345 | 5708916 | SSA11 |  | [NAME] and Metabolism |  |  |  |  | Y | Y
Proteins in MotileCut but not CentricCut
169142 | 5705315 | MOT1 |  | Protein-protein interraction |  |  |  |  | new gene model in v3
171647 | 5706202 | RTN1 |  | No data |  |  |  |  | new gene model in v3
149708 | 5705337 | FAP44 |  | Protein-protein interraction |  | Y |  | Y | Y | Y | Y
194338 | 5709355 | FAP57 | Hypothetical protein contains WD40 repeats | Protein-protein interraction | Deafness, autosomal dominant 2 | Y |  | Y |  | Y | Y |  |  | Y
112249 | 5710479 | POC1 | Found in basal body proteome [PMID: 15964273]. | Protein-protein interaction |  |  | Y |  | Y |  |  |  |  |  | Y
169983 | 5710231 | MOT2 |  | Unclear |  |  |  |  | new gene model in v3
189109 | 5706889 | FAP59 |  | No data |  | Y |  |  |  |  | Y |  |  | Y
148926 | 5705281 | [NAME] |  | No data |  |  |  |  | Y | Y
144011 | 5705309 | [NAME] | (FAP61) | No data |  | Y |  | Y |  | Y | Y |  | Y | Y
134599 | 5705986 | [NAME] | Dynein heavy chain 6 (putative flagellar inner arm dynein heavy chain) | [NAME] |  | Y |  |  | Y | Y | Y | Y | Y
167096 | 5706093 | FAP74 |  | No data | 1p36 deletion syndrome; Bone mineral density variability 3 | Y |  |  |  | Y | Y
176821 | 5706137 | [NAME] |  | Unclear |  |  |  |  | new gene model in v3 |  |  |  |  |  | Y | Y
154904 | 5706505 | FAP263 |  | No data | C8 deficiency, type I | Y |  | Y |  | Y |  |  |  | Y
173632 | 5707289 | MOT5 | Alanine rich novel protein | No data |  | Y
145396 | 5707456 | FAP251 |  | Protein-protein interaction |  | Y |  | Y |  | Y | Y |  |  | Y
102649 | 5708715 | [NAME] |  | Signalling |  |  |  |  | Y | Y
146683 | 5708925 | MOT7 |  | No data |  |  |  |  |  |  |  |  |  | Y
142494 | 5709113 | FAP75 | Flagellar Associated P-Loop Containing Protein | No data |  | Y |  |  |  |  |  |  | Y
194218 | 5709378 | MOT8 |  | No data |  |  |  | Y | new gene model in v3
194403 | 5709602 | MOT9 |  | No data |  |  |  |  | new gene model in v3
190077 | 5709733 | FAP155 |  | Protein-protein interaction |  | Y |  | Y |  | Y | Y |  |  | Y
165974 | 5710024 | MOT10 |  | [NAME] |  |  |  |  | new gene model in v3
126569 | 5710065 | MOT11 |  | [NAME] and Metabolism |  |  |  | Y |  | Y
13542 | 5710242 | POC11 | Found in basal body proteome as POC11 [PMID: 15964273]. | No data | 1p36 deletion syndrome; Bone mineral density variability 3 |  | Y |  |  | Y
195529 | 5710730 | ARLP1 | (ARL13) Expressed Protein. ARF-like 13, a member of the ARF/Sar1 family of [NAME]-like GTPases.  C. elegans ortholog specifically expressed in flagellated cells | GTP-Binding |  | Y |  | Y | new gene model in v3
188246 | 5710879 | FAP69 |  | Protein-protein interaction |  | Y |  | Y |  |  | Y |  |  | Y | Y | Y
121332 | 5711016 | MOT12 |  | No data |  |  |  |  |  | Y
21780 | 5711546 | ARM1 | contains armadillo (Arm) repeat | Protein-protein interaction |  |  |  |  | new gene model in v3
146448 | 5711707 | FAP122 |  | Signalling |  | Y |  |  |  | Y | Y |  |  | Y
190653 | 5706159 | FAP94 |  | No data |  | Y |  | Y |  |  | Y |  |  | Y
103782 | 5706246 | PF16 | Central pair associated protein | [NAME] | Bone mineral density variability 3 | Y |  |  |  |  | Y | Y | Y | Y | Y | Y
177591 | 5706388 | FAP50 |  | Protein-protein interaction |  | Y |  |  |  |  | Y |  |  |  | Y
192295 | 5706575 | FAP184 |  | No data |  | Y |  | Y |  | Y | Y |  | Y | Y
105624 | 5708696 | FBB9 |  | No data |  |  |  |  |  | Y |  |  |  | Y
130542 | 5709331 | VFL3 |  | [NAME] | C8 deficiency, type I |  |  | Y |  | Y
119090 | 5709342 | FAP198 | Presence of a cyt-b5 -like domain in the N terminal part of the protein | Unclear | Blood group, [NAME] antigen; Blood group, [NAME] system; Bone mineral density variability 3 | Y |  |  | Y | Y | Y |  |  | Y
138013 | 5709708 | SPEF1 |  | Unclear |  | Y |  | Y |  | Y |  | Y | Y
116240 | 5709840 | HY3 | (HYD3) Similar to mouse hydrocephaly protein hydin HY3 | Unclear | [NAME]: Hydrocephaly | Y |  |  |  | Y | Y |  | Y | Y
141685 | 5710115 | MOT15 |  | Signalling |  |  |  | Y | new gene model in v3
101210 | 5710416 | PF20 | WD-repeat containing protein PF20 of the central pair of the flagella.  Associates with the intermicrotubule bridge. | [NAME] |  | Y |  |  |  | Y | Y |  |  | Y
193672 | 5710456 | MOT16 |  | Unclear |  |  |  | Y | new gene model in v3 |  |  |  |  | Y | Y | Y
188960 | 5710498 | FAP81 |  | Unclear |  | Y |  | Y |  |  | Y
193355 | 5710580 | FAP43 |  | Protein-protein interaction |  | Y |  | Y |  | Y | Y |  |  | Y
195517 | 5710628 | RAB23 |  | GTP-Binding |  |  |  | Y | Y
130324 | 5710955 | DHC2 | Dynein heavy chain 2 (putative flagellar inner arm dynein heavy chain) | [NAME] | [NAME] syndrome 1 | Y |  | Y |  | Y |  |  | Y
138046 | 5710963 | [NAME] | [NAME] radial spoke protein 3 ([NAME]). axonemal A-kinase anchoring protein KAP [PMID: 11309423; PMID: 16571668; PMID: 16267272; GI:134041]. Gene originally termed PF14 [PMID: 7204490; PMID: 2745550; PMID: 2377611] | [NAME] |  | Y |  | Y | Y | Y | Y | Y | Y | Y | Y | Y
192915 | 5711490 | MOT17 |  | Signalling | Rippling muscle disease-1 |  |  | Y |  |  |  |  |  | Y
172483 | 5711560 | FAP134 |  | Protein-protein interaction | Bone mineral density variability 3 | Y |  |  |  | Y | Y |  |  | Y
182960 | 5711716 | [NAME] | [NAME] radial spoke protein 9; A subunit in the radial spoke head; [NAME] originally termed pf17 [PMID: 7204490, PMID: 16507594; GI:83284713] | [NAME] |  | Y |  | Y |  | Y | Y | Y | Y | Y | Y | Y
177575 | 5708309 | MOT18 |  | RNA metabolism |  |  |  |  | new gene model in v3 |  |  |  |  |  | Y
173947 | 5710187 | MOT19 |  | [NAME] |  |  |  |  | new gene model in v3
192150 | 5709694 | MOT20 |  | [NAME] |  |  |  |  | new gene model in v3
135100 | 5709694 | MOT21 | putative phosphate/phosphoenolpyruvate translocator protein | [NAME] |  |  |  | Y | new gene model in v3
93765 | 5708783 | FAP240 |  | No data |  | Y |  |  |  |  | Y |  |  | Y
177375 | 5709293 | MOT22 |  | Signalling |  |  |  |  | new gene model in v3
173608 | 5710430 | MOT23 |  | Signalling |  |  |  |  | new gene model in v3
184899 | 5710794 | MOT24 |  | [NAME] |  | Y |  | Y | Y |  |  |  |  | Y
192442 | 5711802 | [NAME] |  | Unclear |  |  |  | Y |  | Y |  |  |  | Y
196807 | 5711862 | ELG34 | exostosin-like glycosyltransferase | Metabolism |  |  |  | Y | new gene model in v3
191232 | 5711862 | EGL12 | exostosin-like glycosyltransferase | Metabolism |  |  |  | Y | new gene model in v3
150998 | 5711866 | TEX9 | (FBB15) | No data | C8 deficiency, type I |  |  | Y |  | Y |  |  |  | Y
186414 | 5709707 | KLP1 | Kinesin-like protein 1; kinesin associated with one of the central pair microtubules of the flagellar axoneme | [NAME] | [NAME] syndrome 1 | Y |  | Y |  |  | Y |  |  | Y
189194 | 5711344 | FAP146 |  | No data | Deafness, autosomal dominant 2 | Y |  | Y |  | Y | Y | Y |  | Y
136082 | 5711457 | UNI3 | Delta tubulin (TUD)[gi:7441381]  Required for assembly of the basal body/centriole and localizes to the basal body | [NAME] |  |  | Y |  | new gene model in v3
117499 | 5709647 | MOT26 |  | No data | Myasthenia gravis, neonatal transient |  |  |  |  | Y
168675 | 5707372 | [NAME] |  | No data |  |  |  |  | new gene model in v3 |  |  |  |  | Y
150732 | 5710991 | SSMT | SET domain-containing methyltransferase; catalyzes methylation of the N-terminal alpha-amino group of the processed form of  RuBisCO small subunit prior to holoenzyme assembly | Protein-protein interraction |  |  |  | Y | new gene model in v3
140873 | 5711553 | SMP10 | (PRP1) Predicted snRNP core protein; SMP10 name replaces previous PRP1 name | RNA metabolism |  |  |  |  | new gene model in v3
177784 | 5705352 | [NAME] |  | No data |  |  |  |  | new gene model in v3 |  |  |  |  |  | Y
181739 | 5709937 | MOT29 |  | No data |  |  |  |  | new gene model in v3
179771 | 5709937 | MOT30 |  | No data |  |  |  |  | new gene model in v3
151105 | 5710089 | [NAME] |  | Protein-protein interaction |  |  |  |  | new gene model in v3
109243 | 5710241 | MOT32 |  | No data
106614 | 5710241 | MOT33 |  | No data |  |  |  |  | new gene model in v3
107462 | 5710241 | MOT34 |  | No data | 1p36 deletion syndrome; Bone mineral density variability 3
141109 | 5710324 | FAP46 |  | No data |  | Y |  |  |  |  | Y
191879 | 5710410 | MOT35 |  | No data
187854 | 5710441 | FAP161 |  | No data |  | Y |  | Y |  |  | Y |  | Y |  | Y | Y
190937 | 5710532 | FBB5 |  | No data |  |  |  | Y |  | Y |  |  |  | Y
188180 | 5710541 | FAP111 |  | Protein-protein interaction |  | Y |  | Y |  | Y | Y |  |  | Y | Y
6466 | 5710586 | POC18 | Found in basal body proteome [PMID: 15964273] | Protein-protein interaction | Epilepsy, myoclonic, benign adult familial; Macular dystrophy, atypical vitelliform |  | Y |  | Y | Y
180607 | 5710673 | MOT36 |  | No data
146778 | 5711548 | MOT37 |  | Protein-protein interaction | 1p36 deletion syndrome; Bone mineral density variability 3 |  |  |  |  | Y
151348 | 5711741 | [NAME] |  | No data |  |  |  |  |  | Y
173581 | 5710018 | MOT39 |  | Protein turnover | Triphalangeal thumb-polysyndactyly syndrome |  |  |  |  | Y |  |  |  |  | Y | Y
188195 | 5710277 | [NAME] | Epsilon tubulin (TUE) [gi:20514387, PMID: 12429830] | [NAME] |  |  | Y | Y | new gene model in v3
189500 | 5710403 | MOT40 |  | No data |  |  |  | Y | new gene model in v3 |  |  |  |  | Y
142470 | 5710516 | MOT41 | This gene is in the location of Probe 2 used in PMID: 11805055. | No data |  |  |  | Y |  | Y |  |  |  | Y
152883 | 5705024 | MOT42 |  | Protein turnover |  |  |  | Y | new gene model in v3
179158 | 5710249 | FAD5b | Fatty acid desaturase like, similar to Arabidopsis putative FAD5 | Membrane synthesis/differentiation |  |  |  |  | new gene model in v3
122385 | 5710249 | FAD5D |  | Membrane synthesis/differentiation |  |  |  |  | new gene model in v3
153533 | 5710249 | FAD5C |  | Membrane synthesis/differentiation |  |  |  |  | new gene model in v3
94516 | 5710642 | MOT13 |  | DNA Binding |  |  |  |  | new gene model in v3
43319 | 5705234 | MOT14 |  | Unclear | 1p36 deletion syndrome; Bone mineral density variability 3 |  |  |  |  |  |  |  |  | Y
134605 | 5711269 | CDJ2 |  | Chaperone |  |  |  | Y | new gene model in v3
Proteins in both CentricCut and MotileCut
107408 | 5707103 | MOT47 |  | Protein-protein interraction | Epilepsy, myoclonic, benign adult familial; Macular dystrophy, atypical vitelliform |  |  |  |  | Y |  |  |  | Y
196793 | 5708194 | FAP45 | Identified in Chlamydomonas basal body proteome as BUG28 [[NAME] et al., 2005; PMID: 15964273]. Weakly similar to nasopharyngeal epithelium-specific protein 1 | No data | Leukemia, acute pre-B-cell; Atherosclerosis, susceptibility to | Y |  | Y | Y |  |  | Y
129295 | 5708315 | KIF6 |  | Trafficking |  |  |  | Y |  |  |  |  |  | Y
180221 | 5708949 | NDK7 | ([NAME]) in basal body proteome as [NAME] [PMID: 15964273]. | Metabolism |  | Y |  |  |  |  | Y | Y | Y | Y
126286 | 5709885 | Rib72 | novel component of the ribbon compartment of flagellar microtubules. | [NAME] |  | Y |  | Y |  | Y | Y | Y | Y | Y
143267 | 5710023 | MOT48 |  | No data | C8 deficiency, type I |  |  | Y |  | Y
182403 | 5709730 | C1 | RNA-binding protein with three KH domains and a protein-protein interaction domain (WW) at the C-terminus  [NAME] of the circadian RNA-binding protein CHLAMY 1 (Zhao et al., Euk. Cell, in press) | RNA metabolism |  |  |  | Y |  | Y
186669 | 5707578 | DLC1 | [NAME] outer dynein arm light chain 1 | [NAME] |  | Y |  | Y | Y | Y | Y |  |  | Y
115671 | 5706503 | ECH1 |  | Membrane synthesis/differentiation |  |  |  |  | new gene model in v3
107386 | 5706608 | MOT50 |  | Protein metabolism
192170 | 5706578 | MB02 | Move backward only mutant defective in the production of the ciliary waveform.  Mbo2p is a novel coiled-coil protein. | Protein-protein interraction | Aneurysm, intracranial berry | Y |  | Y |  | Y | Y |  | Y
106450 | 5709417 | FAP250 |  | No data |  | Y |  |  |  | Y | Y |  |  | Y
169559 | 5709521 | FBB15 |  | Signalling |  | Y |  |  |  | Y | Y |  |  | Y
137793 | 5710049 | NKRN1 | (FAP106) | Signalling | Bone mineral density variability 3 | Y |  | Y |  | Y | Y |  |  | Y
168908 | 5708554 | MOT51 |  | Unclear |  |  |  |  |  | Y
135463 | 5705051 | FBB4 |  | Signalling | Retinitis pigmentosa-10 | Y |  | Y |  | Y |  |  |  | Y
186878 | 5705821 | FAP100 |  | No data | Renal cell carcinoma; Glaucoma 1C, primary open angle | Y |  | Y |  | Y | Y |  |  | Y
121413 | 5709547 | FAP73 |  | No data | Blood group, [NAME] antigen; Blood group, [NAME] system; Bone mineral density variability 3 | Y |  |  |  | Y | Y |  |  | Y
132719 | 5709873 | ODA1 | [NAME] outer dynein arm-docking complex subunit 2 (ODA-DC 2) | [NAME] |  | Y |  | Y | Y | Y | Y |  | Y | Y | Y
132143 | 5710434 | CTO59 | (FBB5) Similar to C21orf59 (CTO59) | No data |  |  |  | Y | Y | Y |  |  |  | Y | Y | Y
192441 | 5705837 | RABL2A | Expressed Protein. Distantly similar to a class of Rab-like proteins from mammals. | GTP-Binding |  |  |  | Y |  |  |  |  |  | Y
3686 | 5705975 | RJL1 | Expressed Protein. Member of the RJL family in the [NAME] superfamily of GTPases (Nepomuceno-Silva et al. 2004, [NAME]) | GTP-Binding |  |  |  | Y
77703 | 5708336 | RIB43a | Coiled-coil protein associated with protofilament ribbons of flagellar microtubules (PMID 10637302). | [NAME] |  | Y |  | Y | Y | Y | Y | Y |  | Y
192763 | 5709569 | MOT52 |  | [NAME] and Metabolism | Bone mineral density variability 3 |  |  | Y |  | Y
24252 | 5709882 | ODA4 | Flagellar outer dynein arm heavy chain beta | [NAME] | Blood group, [NAME] antigen; Blood group, [NAME] system; Bone mineral density variability 3 | Y |  | Y |  | Y | Y | Y |  | Y
188612 | 5709886 | ODA6 | Flagellar outer dynein arm intermediate chain 2, IC2, ODA-IC2, IC69, IC70 | [NAME] |  | Y |  | Y | Y | Y | Y | Y | Y | Y
149002 | 5710454 | MOT53 |  | Protein-protein interraction |  |  |  |  | new gene model in v3
188421 | 5710529 | MOT54 |  | Protein-protein interraction |  | Y |  |  |  |  |  |  |  | Y
144241 | 5710529 | FAP264 |  | Protein-protein interraction |  |  |  | Y |  |  |  |  |  | Y
145799 | 5711409 | [NAME] |  | Unclear |  |  |  |  | new gene model in v3
189445 | 5711409 | [NAME] |  | Unclear |  |  |  | Y | new gene model in v3 |  | Y
142227 | 5708384 | MOT44 |  | [NAME] | C8 deficiency, type I |  |  |  |  | Y
160148 | 5705956 | FBB11 |  | No data |  |  |  | Y |  | Y
175396 | 5711057 | MOT45 |  | No data |  |  |  |  | new gene model in v3
195180 | 5706594 | MOT46 |  | RNA metabolism | Hypotrichosis, [NAME] type; Schizophrenia |  |  | Y
129193 | 5709938 | FAP156 | Expressed Protein. Rab-type GTPase distantly related to Rab-like proteins from mammals. | GTP-Binding |  | Y |  | Y |  |  | Y | Y |  | Y | Y
116664 | 5709999 | MOT49 |  | Protein-protein interaction |  |  |  |  | Y |  |  |  |  | Y | Y | Y
151144 | 5706167 | PF2 | Component of dynein regulatory complex (DRC) of flagellar axoneme; has similarity to mammalian growth-arrest specific gene product (Gas11/Gas8), trypanin related, PMID: 10969087 PMID: 11864997 | [NAME] |  | Y |  | Y | Y | Y | Y | Y | Y | Y
Proteins in CentricCut but not MotileCut
128114 | 5706542 | FAP52 | (BUG14) in basal body proteome as BUG14 [PMID: 15964273]. | Protein-protein interraction | Blood group, [NAME] antigen; Blood group, [NAME] system; Bone mineral density variability 3 | Y |  | Y | Y |  | Y |  |  | Y
131284 | 5708587 | DIP13 | Similar to [NAME]'s syndrome nuclear autoantigen 1. | [NAME] and Metabolism | Amyotrophic lateral sclerosis-4, juvenile dominant; [NAME], T-cell acute lymphoblastic | Y | Y | Y |  | Y | Y |  |  | Y |  | Y
195496 | 5709491 | SSA12 |  | Unclear |  |  |  | Y | Y
100760 | 5710578 | FAP267 |  | [NAME] and Metabolism |  | Y |  |  |  | Y
127720 | 5706974 | SSA13 |  | Signalling | Epilepsy, myoclonic, benign adult familial; Macular dystrophy, atypical vitelliform |  |  | Y | Y | Y
171688 | 5709575 | SSA14 | Some similarities with flavoprotein monooxygenases | Metabolism |  |  |  |  | new gene model in v3
3897 | 5709171 | DPY30 | (FBB12) Desc Chromatin modifying protein complex member, identified by mutations in C. elegans defective in male sensory behavior. | Protein-protein interaction |  | Y |  | Y |  | Y |  | Y | Y
97201 | 5705256 | PACRG1 | (BUG21) in basal body proteome as BUG21 [PMID: 15964273]. Homologous to mammalian PACRG parkin co-regulated gene. | No data |  | Y | Y |  | Y | Y | Y |  | Y | Y | Y | Y
191923 | 5709909 | SSA15 |  | Protein-protein interraction |  |  |  | Y | new gene model in v3
192420 | 5705900 | FAP22 | Similar to D. rerio cystic kidney disease gene qilin | No data | 1p36 deletion syndrome; Bone mineral density variability 3 | Y |  | Y | Y | Y | Y | Y |  | Y
128761 | 5708192 | [NAME] | (ARL3)  [NAME]. Similar to the ARLC-type GTPases. ,  ARF-like 3, a member of the ARF/Sar1 GTPase family. Experimental evidence and presence only in organisms with flagella suggest a function in the flagellum/basal body. | [NAME] and Metabolism |  | Y |  | Y | Y |  | Y
132451 | 5709415 | IDA4 | Flagellar inner arm dynein light chain p28 | [NAME] | Deafness, autosomal dominant 2 | Y |  | Y | Y | Y | Y | Y | Y | Y |  | Y
24116 | 5709496 | BLD1 | (IFT52) Intraflagellar transport protein [NAME]. 2001. 11(20):1591-4.  The C. elegans homologue is osm-6. | Flagellar transport |  | Y |  | Y | Y | Y | Y | Y |  | Y
185392 | 5709600 | FAP116 | Similar to Microtubule Interacting TNF Receptor-Associated Factor 3 Interacting Protein 1 | Trafficking |  | Y |  | Y | new gene model in v3 |  | Y |  |  | Y
108954 | 5709902 | FAP32 |  | No data |  | Y |  |  | Y | Y | Y | Y |  | Y
98642 | 5710979 | IFT57 | Intraflagellar transport particle protein 57 | Flagellar transport |  | Y |  |  | Y | Y | Y | Y |  | Y
128801 | 5711212 | TPR5 | (FAP259) Desc TPR protein with similarity to human FLJ30990. similar to dyf-1 (C. elegans) | Protein-protein interraction | Duane retraction syndrome 2 | Y |  | Y | Y | Y |  | Y |  | Y
24421 | 5705296 | IFT88 | Intraflagellar transport particle protein 88 | Flagellar transport | Bone mineral density variability 3; [NAME] model: PKD, RP | Y |  | Y | Y | Y | Y | Y |  | Y
147682 | 5706286 | [NAME] |  | No data | Deafness, autosomal dominant 2 |  |  | Y
182554 | 5707722 | KAP | Kinesin-associated protein; probable non-motor subunit of kinesin-II, the anterograde motor for intraflagellar transport. | Flagellar transport |  | Y |  | Y | Y | Y |  |  |  | Y
138649 | 5707942 | IFT81 | Desc Intraflagellar Transport Protein 81 | Flagellar transport |  | Y |  | Y |  | Y | Y | Y |  | Y
136521 | 5708482 | IFT74/72 | Intraflagellar transport particle protein 74/72 | Flagellar transport |  | Y |  | Y |  | Y | Y |  |  | Y
32880 | 5708502 | NPH4 | Found in basal body proteome as POC10 [PMID: 15964273]. Mammalian homolog is NPHP-4, also known as nephroretinin, gene mutated in Senior-Loken syndrome. | No data | Senior-Loken syndrome |  | Y | Y |  | Y
130473 | 5709311 | MKS1 | Ortholog of the human Meckel Syndrome 1 gene | No data | Meckel Syndrome, Bone mineral density variability 3 |  | Y | Y | Y | Y |  |  |  |  | Y
169948 | 5706569 | IRK1 | putative inward rectifier K+ channel  TC# 1.A.2 | [NAME] | Bone mineral density variability 3 |  |  |  |  | Y
192430 | 5709753 | SSA16 |  | Signalling | Bone mineral density variability 3 |  |  | Y |  | Y |  |  |  | Y
129433 | 5710308 | ODA9 | Flagellar outer dynein arm intermediate chain 1, IC1, ODA-IC1, IC78 | [NAME] |  | Y |  | Y | Y | Y | Y | Y | Y | Y | Y | Y
169222 | 5706998 | SSA17 |  | Protein-protein interaction |  |  |  |  | new gene model in v3
111541 | 5707143 | [NAME] |  | RNA metabolism |  |  |  |  |  | Y
147671 | 5705982 | SSA19 |  | Protein metabolism |  |  |  |  |  | Y
143218 | 5709875 | SSA20 |  | Protein metabolism |  |  |  |  |  | Y |  |  |  |  | Y
TOTAL NUMBERS IN EACH COLUMN |  |  |  |  |  | 88 | 10 | 102 | 47 | 106 | 68 | 28 | 21 | 85 | 24 | 17
TOTAL GENES IN DATASET THAT MAP TO v3: |  |  |  |  |  |  |  |  | 187 | 687 | 331 | 138 | 73 | 146 | 318 | 126