Spreadsheet: 4af68891-c485-4244-afbc-6a14d5733a1a
Sheet: Sheet1

Table S16. SiRNAs clustered within S. japonicum predicted mRNAs | Unnamed: 1 | Unnamed: 2 | Unnamed: 3 | Unnamed: 4 | Unnamed: 5 | Unnamed: 6 | Unnamed: 7 | Unnamed: 8 | Unnamed: 9 | Unnamed: 10 | Unnamed: 11 | Unnamed: 12 | Unnamed: 13 | Unnamed: 14 | Unnamed: 15
mRNA | Class | Sense |  | Antisense |  | Blastx  KEGG |  |  |  |  |  | Interpro | GO
 |  | # of Clusters | Clusters | # of Clusters | Clusters | Best hits | Identity | Score | E-value | Annotation | [NAME] |  | Molecular Function | Cellular Component | Biological Process
CNUS0000095466.1 | Sense | 1 | [NAME] |  |  | [NAME] | 27 | 96.7 | 7e-19 | universal minicircle sequence binding protein (UMSBP) ; K09250 cellular nucleic acid-binding protein | |Protein Families; Genetic Information Processing; Transcriptionfactors [BR:ko03000]; | |%IPR001878:Zinc finger, CCHC-type :%IPR013084:Zinc finger, CCHC retroviral-type | |GO:0003676:nucleic acid binding|GO:0008270:zinc ion binding
CNUS0000095475.1 | Sense | 1 | 132_236_+_105_44_8.87 |  |  | api:100161763 | 62 | 82 | 7e-15 | similar to 60S acidic ribosomal protein P1-like protein |  | |%IPR001813:Ribosomal protein 60S : | |GO:0003735:structural constituent of ribosome | |GO:0005622:intracellular|GO:0005840:ribosome | |GO:0006414:translational elongation
CNUS0000095508.1 | Sense | 1 | 62_166_+_105_207_42.86 |  |  | rno:63865 | 43 | 335 | 4e-90 | [NAME]; legumain (EC:3.4.22.34); [NAME] [EC:3.4.22.34] | |Cellular Processes; Immune System; Antigen processing andpresentation [[NAME]:[NAME]:ko04612];|Protein Families; Metabolism; Peptidases [BR:ko01002]; | |%IPR001096:[NAME], legumain : | |GO:0001509:legumain [NAME]:cysteine-type endopeptidase activity |  | |GO:0006508:proteolysis
CNUS0000095525.1 | Sense | 1 | 314_426_+_113_50_9.14 |  |  | tca:656063 | 54 | 114 | 2e-24 | similar to CG5654-PA |  | |%IPR002059:Cold-shock protein, DNA-binding :%IPR011129:Cold shock protein | |GO:0003676:nucleic acid binding|GO:0003677:DNA binding |  | |GO:0006355:regulation of transcription, DNA-dependent
CNUS0000095615.1 | Sense | 3 | 1_121_+_121_420_78|1038_1158_+_121_72_12.76|1526_1643_+_118_144_27 |  |  | gga:415296 | 97 | 731 | 0 | RCJMB04_1h13, ACTG1; actin, gamma 1 ; K05692 actin beta/gamma 1 | |Cellular Processes; Cell Communication; Adherens junction[PATH:[NAME]:ko04520];|Cellular Processes; Cell Communication; Focal adhesion[PATH:ko04510-Map:ko04510];|Cellular Processes; Cell Communication; Tight junction[PATH:ko04530-Map:ko04530];|Cellular Processes; Cell Motility; Regulation of actin cytoskeleton[PATH:[NAME]:ko04810];|Cellular Processes; Immune System; [NAME] transendothelialmigration [[NAME]:[NAME]:ko04670];|Human [NAME]; Infectious Diseases; [NAME] infection[PATH:[NAME]:ko05110];|Protein Families; Cellular Processes and Signaling; Cytoskeletonproteins [BR:ko04812];|Protein Families; Genetic Information Processing; Chromosome[BR:[NAME] | |%IPR004000:[NAME]/actin-like :%IPR004001:Actin | |GO:0005515:protein binding|GO:0005524:ATP binding
CNUS0000095795.1 | Sense | 2 | 184_288_+_105_81_16.57|307_426_+_120_150_26.9 |  |  | nve:NEMVE_v1g188669 | 96 | 855 | 0 | predicted protein ; [NAME] | |Cellular Processes; Cell Communication; Gap junction [[NAME]:ko04540-Map:ko04540];|Protein Families; Cellular Processes and Signaling; Cytoskeletonproteins [BR:[NAME] | |%IPR000217:Tubulin :%IPR002452:Alpha tubulin | |GO:0003924:GTPase activity|GO:0005198:structural molecule activity|GO:0005525:GTP binding | |GO:0005874:microtubule|GO:0043234:protein complex | |GO:0007017:microtubule-based process|GO:0007018:microtubule-based movement|GO:0051258:protein polymerization
CNUS0000095812.1 | Sense | 1 | 65_179_+_115_375_72.19 |  |  | dgr:Dgri_GH15313 | 47 | 91.3 | 1e-17 | GH15313 gene product from transcript GH15313-RA |  | |%IPR000463:Cytosolic fatty-acid binding :%IPR000566:Lipocalin-related protein and Bos/Can/Equ allergen | |GO:0005215:transporter activity|GO:0005488:binding|GO:0008289:lipid binding |  | |GO:0006810:transport
CNUS0000095943.1 | Sense | 1 | 64_182_+_119_293_52.32
CNUS0000096138.1 | Sense | 1 | 734_845_+_112_63_11.97 |  |  | tad:TRIADDRAFT_63119 | 55 | 368 | 1e-100 | expressed hypothetical protein ; K01363 cathepsin B [EC:3.4.22.1] | |Cellular Processes; Immune System; Antigen processing andpresentation [[NAME]:[NAME]:ko04612];|Protein Families; Metabolism; Peptidases [BR:ko01002]; | |%IPR000169:Peptidase, cysteine peptidase active site :%IPR000668:Peptidase C1A, papain C-terminal | |GO:0004197:cysteine-type endopeptidase activity|GO:0008234:cysteine-type peptidase activity |  | |GO:0006508:proteolysis|GO:0050790:regulation of catalytic activity
CNUS0000096264.1 | Sense | 1 | 246_359_+_114_78_14.44 |  |  | xtr:549444 | 71 | 248 | 7e-65 | hypothetical protein LOC549444 |  | |%IPR002670:Ribosomal protein L18ae : | |GO:0003735:structural constituent of ribosome | |GO:0005622:intracellular|GO:0005840:ribosome | |GO:0006412:translation
CNUS0000096361.1 | Sense | 3 | 553_667_+_115_33_6.18|1406_1521_+_116_121_22.35|1592_1765_+_174_119_15.16 |  |  | dre:378848 | 63 | 770 | 0 | hspa5; heat shock protein 5 |  | |%IPR000886:Endoplasmic reticulum targeting sequence :%IPR001023:Heat shock protein Hsp70 | |GO:0005524:ATP binding | |GO:0005783:endoplasmic reticulum
CNUS0000096495.1 | Sense | 1 | 262_365_+_104_45_9.2 |  |  | [NAME] | 69 | 191 | 1e-47 | zgc:77708 ; K02155 V-type H+-transporting ATPase 16kDa proteolipid subunit [EC:3.6.3.14] | |Human [NAME]; Infectious Diseases; Epithelial cell signaling inHelicobacter pylori infection [[NAME]:ko05120-Map:ko05120];|Human Diseases; Infectious Diseases; [NAME] infection[PATH:[NAME]:ko05110];|Metabolism; Energy Metabolism; Oxidative phosphorylation[PATH:ko00190-Map:ko00190]; | |%IPR000245:ATPase, V0 complex, proteolipid subunit C, :%IPR000454:ATPase, F0 complex, subunit C | |GO:0046933:hydrogen ion transporting ATP synthase activity, rotational mechanism|GO:0046961:hydrogen ion transporting ATPase activity, rotational mechanism | |GO:0016020:membrane|GO:0016021:integral to membrane|GO:0016469:proton-transporting two-sector ATPase complex | |GO:0015986:ATP synthesis coupled proton transport
CNUS0000096516.1 | Sense | 1 | 622_757_+_136_24_3.75 |  |  | oaa:100079389 | 28 | 250 | 5e-64 | similar to lethal giant larvae homolog 1 |  | |%IPR011046:WD40 repeat-like :%IPR013577:Lethal giant larvae homologue 2
CNUS0000096571.1 | Sense | 1 | 1100_1218_+_119_86_15.77 |  |  | ecb:100063156 | 34 | 421 | 1e-116 | similar to cell division cycle and apoptosis regulator 1 |  | |%IPR003034:DNA-binding SAP : | |GO:0003676:nucleic acid binding
CNUS0000096580.1 | Sense | 1 | 1342_1457_+_116_23_4.45 |  |  | xla:446712 | 71 | 1252 | 0 | eft-2; translation elongation factor 2 |  | |%IPR000640:Translation elongation factor EFG/EF2, C-terminal :%IPR000795:Protein synthesis factor, GTP-binding | |GO:0003924:GTPase activity|GO:0005525:GTP binding
CNUS0000096640.1 | Sense | 1 | 1839_1938_+_100_285_55.69 |  |  | dre:30116 | 53 | 147 | 2e-33 | [NAME]; [NAME] ; K11594 ATP-dependent RNA helicase bel [EC:3.6.1.-] | |Protein Families; Genetic Information Processing; Chromosome[BR:[NAME] | |%IPR000504:RNA recognition motif, RNP-1 :%IPR001650:DNA/RNA helicase, C-terminal | |GO:0000166:nucleotide binding|GO:0003676:nucleic acid [NAME]:helicase activity|GO:0005524:ATP binding
CNUS0000096794.1 | Sense | 1 | 123_246_+_124_171_31.64 |  |  | nfi:NFIA_070490 | 70 | 138 | 7e-32 | hypothetical protein ; [NAME] large subunit ribosomal protein L37e | |Genetic Information Processing; Translation; Ribosome [[NAME]:[NAME]:ko03010];|Protein Families; Genetic Information Processing; Ribosome[BR:ko03011]; | |%IPR001569:Ribosomal protein L37e :%IPR011331:Ribosomal protein L37ae/L37e, core | |GO:0003735:structural constituent of ribosome | |GO:0005622:intracellular|GO:0005840:ribosome | |GO:0006412:translation
CNUS0000096900.1 | Sense | 1 | 123_299_+_177_153_18.84 |  |  | xtr:549623 | 100 | 162 | 4e-39 | TGas006m08.1; hypothetical protein LOC549623 ; K11254 histone H4 | |Human [NAME]; [NAME]; Systemic lupus erythematosus[PATH:[NAME]:ko05322];|Protein Families; Genetic Information Processing; Chromosome[BR:[NAME] | |%IPR001951:Histone H4 :%IPR004823:TATA box binding protein associated factor (TAF) | |GO:0003677:DNA binding|GO:0016986:transcription initiation factor activity | |GO:0000786:nucleosome|GO:0005634:nucleus | |GO:0006334:nucleosome assembly|GO:0006352:transcription initiation|GO:0007001:chromosome organization and biogenesis (sensu Eukaryota)
CNUS0000096940.1 | Sense | 1 | 196_365_+_170_7150_821.5
CNUS0000097145.1 | Sense | 1 | 3177_3293_+_117_839_139.26 |  |  | bta:508334 | 27 | 102 | 2e-19 | hypothetical protein LOC508334
CNUS0000097149.1 | Sense | 1 | 190_303_+_114_66_13.15 |  |  | aag:AaeL_AAEL002761 | 51 | 154 | 1e-36 | tropomyosin invertebrate |  | |%IPR000533:Tropomyosin :
CNUS0000097201.1 | AntiSense |  |  | 1 | 1707_1806_-_100_86_16.92 | xtr:100125069 | 61 | 418 | 1e-115 | hypothetical protein LOC100125069 ; K04557 peanut-like protein 1 (cell division control related protein 1) | |Human [NAME]; Neurodegenerative Diseases; Parkinson's disease[PATH:ko05012-Map:[NAME] | |%IPR000038:Cell division/GTP binding protein : | |GO:0005525:GTP binding |  | |GO:0007049:cell cycle
CNUS0000097332.1 | Sense | 1 | 800_904_+_105_43_8.98 |  |  | xla:447602 | 60 | 238 | 2e-61 | MGC84815 protein |  | |%IPR000504:RNA recognition motif, RNP-1 :%IPR012677:Nucleotide-binding, alpha-beta plait | |GO:0000166:nucleotide binding|GO:0003676:nucleic acid binding
CNUS0000097383.1 | Sense | 2 | 677_792_+_116_113_21.47|794_914_+_121_87_15.59 |  |  |  |  |  |  |  |  | |%IPR002068:Heat shock protein Hsp20 :%IPR008978:HSP20-like chaperone
CNUS0000097647.1 | Sense | 1 | 627_731_+_105_29_6.33
CNUS0000097764.1 | Sense | 2 | 322_426_+_105_95_19.68|428_541_+_114_66_12.73 |  |  | bmy:Bm1_27835 | 77 | 306 | 3e-82 | 40S ribosomal protein S5; K02989 small subunit ribosomal protein S5e | |Genetic Information Processing; Translation; Ribosome [[NAME]:[NAME]:ko03010];|Protein Families; Genetic Information Processing; Ribosome[BR:ko03011]; | |%IPR000235:Ribosomal protein S7 :%IPR005716:Ribosomal protein S7, eukaryotic/archaeal | |GO:0003735:structural constituent of ribosome | |GO:0005622:intracellular|GO:0005840:ribosome|GO:0015935:small ribosomal subunit | |GO:0006412:translation
CNUS0000097821.1 | Sense | 1 | 184_304_+_121_230_41.88 |  |  | [NAME] | 77 | 512 | 1e-143 | mg:bb02e05 ; K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] | |Human [NAME]; Neurodegenerative Diseases; Alzheimer's disease[PATH:[NAME]:ko05010];|Human Diseases; Neurodegenerative Diseases;Dentatorubropallidoluysian atrophy (DRPLA) [[NAME]:ko05050-Map:];|Metabolism; Carbohydrate Metabolism; Glycolysis / Gluconeogenesis[PATH:[NAME]:[NAME] | |%IPR000173:[NAME] dehydrogenase :%IPR006424:Glyceraldehyde-3-phosphate dehydrogenase, type I | |GO:0004365:glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity|GO:0008943:glyceraldehyde-3-phosphate dehydrogenase [NAME]:NAD binding |  | |GO:0006006:glucose metabolic process|GO:0006096:glycolysis
CNUS0000097968.1 | Sense | 1 | 933_1032_+_100_43_9.86 |  |  | api:100167379 | 31 | 392 | 1e-107 | similar to [NAME] heavy chain |  | |%IPR002928:[NAME] tail :%IPR009053:Prefoldin | |GO:0003774:motor activity | |GO:0016459:[NAME]
CNUS0000098090.1 | Sense | 1 | [NAME] |  |  | bfo:BRAFLDRAFT_97213 | 23 | 105 | 6e-21 | hypothetical protein |  | |%IPR000652:Triosephosphate isomerase :%IPR006621:Nose resistant to fluoxetine-4, N-terminal | |GO:0003824:catalytic activity|GO:0004807:triose-phosphate isomerase activity |  | |GO:0008152:metabolic process
CNUS0000098380.1 | Sense | 4 | 185_304_+_120_325_56.22|491_608_+_118_158_29.73|676_792_+_117_474_92.07|916_1032_+_117_616_115.82 |  |  | xtr:100216108 | 99 | 739 | 0 | hypothetical protein LOC100216108 |  | |%IPR000626:[NAME] : |  |  | |GO:0006464:protein modification process
CNUS0000098528.1 | AntiSense |  |  | 1 | 305_423_-_119_108_17.94 | cel:K02F6.1 | 21 | 73.6 | 2e-11 | hypothetical protein |  | |%IPR009007:Peptidase aspartic, catalytic : | |GO:0004190:aspartic-type endopeptidase activity |  | |GO:0006508:proteolysis
CNUS0000098774.1 | AntiSense |  |  | 1 | 1046_1158_-_113_876_147.07 | bfo:BRAFLDRAFT_63910 | 52 | 224 | 1e-56 | hypothetical protein |  | |%IPR001806:[NAME] :%IPR002041:Ran GTPase | |GO:0003924:GTPase activity|GO:0005515:protein binding|GO:0005525:GTP binding|GO:0016868:intramolecular transferase activity, phosphotransferases | |GO:0005622:intracellular | |GO:0005975:carbohydrate metabolic process|GO:0006886:intracellular protein transport|GO:0006913:nucleocytoplasmic transport|GO:0007165:signal transduction|GO:0007264:small GTPase mediated signal transduction|GO:0015031:protein transport
CNUS0000098921.1 | Both | 2 | 2639_2744_+_106_423_78.62|2746_2866_+_121_1012_162.09 | 2 | 2639_2740_-_102_549_102.45|3051_3171_-_121_2257_356.48 | gga:420446 | 24 | 119 | 7e-25 | NOM1; nucleolar protein with MIF4G domain 1
CNUS0000098938.1 | Sense | 1 | 369_485_+_117_174_31.76 |  |  | nve:NEMVE_v1g179973 | 67 | 389 | 1e-106 | predicted protein |  | |%IPR005484:Ribosomal protein L18/L5 :%IPR005485:Ribosomal protein L5, eukaryotic | |GO:0003735:structural constituent of ribosome|GO:0008097:5S rRNA binding | |GO:0005622:intracellular|GO:0005840:ribosome | |GO:0006412:translation
CNUS0000099038.1 | Both | 2 | 255_365_+_111_205_37.09|550_669_+_120_7687_1369.01 | 1 | 248_365_-_118_149_25.11 | api:100164988 | 38 | 120 | 6e-26 | similar to transposase domain-containing protein
CNUS0000099040.1 | Both | 2 | 255_365_+_111_280_49.83|550_669_+_120_6537_1104.68 | 2 | 550_731_-_182_3741_410.47|855_975_-_121_645_107.47 | dre:100150592 | 32 | 276 | 2e-72 | similar to transposase domain-containing protein
CNUS0000099107.1 | Sense | 1 | 489_605_+_117_86_16.54 |  |  | [NAME]:Dsec_GM15627 | 63 | 270 | 3e-71 | GM15627 gene product from transcript GM15627-RA |  | |%IPR002130:Peptidyl-prolyl cis-trans isomerase, cyclophilin-type :%IPR015891:Cyclophilin-like | |GO:0003755:peptidyl-prolyl cis-trans isomerase activity |  | |GO:0006457:protein folding
CNUS0000099234.1 | Sense | 2 | 252_358_+_107_7786_1436.38|739_851_+_113_15436_2631.21
CNUS0000099296.1 | Sense | 1 | 990_1095_+_106_110_22.78 |  |  | [NAME] | 81 | 644 | 0 | MGC84751 protein |  | |%IPR008146:Glutamine synthetase, catalytic region :%IPR008147:Glutamine synthetase, beta-Grasp | |GO:0003824:catalytic activity|GO:0004356:glutamate-ammonia ligase activity |  | |GO:0006542:glutamine biosynthetic process|GO:0006807:nitrogen compound metabolic process
CNUS0000099371.1 | Sense | 1 | 187_300_+_114_30_5.67 |  |  | api:100164889 | 30 | 136 | 4e-30 | similar to membrane protein band 4.1 |  | |%IPR000299:[NAME], N-terminal :%IPR014352:FERM-type 3-helical bundle | |GO:0005488:binding | |GO:0005856:cytoskeleton
CNUS0000099409.1 | Sense | 2 | 197_303_+_107_133_29.03|611_731_+_121_228_40.53 |  |  | bmy:Bm1_34930 | 96 | 744 | 0 | [NAME]; K05692 actin beta/gamma 1 | |Cellular Processes; Cell Communication; Adherens junction[PATH:[NAME]:ko04520];|Cellular Processes; Cell Communication; Focal adhesion[PATH:ko04510-Map:ko04510];|Cellular Processes; Cell Communication; Tight junction[PATH:ko04530-Map:ko04530];|Cellular Processes; Cell Motility; Regulation of actin cytoskeleton[PATH:[NAME]:ko04810];|Cellular Processes; Immune System; [NAME] transendothelialmigration [[NAME]:[NAME]:ko04670];|Human [NAME]; Infectious Diseases; [NAME] infection[PATH:[NAME]:ko05110];|Protein Families; Cellular Processes and Signaling; Cytoskeletonproteins [BR:ko04812];|Protein Families; Genetic Information Processing; Chromosome[BR:[NAME] | |%IPR004000:[NAME]/actin-like :%IPR004001:Actin | |GO:0005515:protein binding|GO:0005524:ATP binding
CNUS0000099444.1 | Sense | 1 | 137_298_+_162_436_57.5 |  |  | bta:281495 | 48 | 81.6 | 1e-14 | SOD1; superoxide dismutase 1, soluble (EC:1.15.1.1); [NAME] superoxide dismutase [EC:1.15.1.1] | |Human [NAME]; Neurodegenerative Diseases; [NAME] lateralsclerosis (ALS) [[NAME]:[NAME]:ko05014];|Human Diseases; Neurodegenerative Diseases; Huntington's disease[PATH:ko05016-Map:ko05016]; | |%IPR001424:Superoxide dismutase, copper/zinc binding : | |GO:0004785:copper, zinc superoxide dismutase activity|GO:0046872:metal ion binding |  | |GO:0006801:superoxide metabolic process
CNUS0000099548.1 | Both | 2 | 244_365_+_122_7810_1263.5|733_851_+_119_16265_2639.61 | 2 | 367_485_-_119_22713_3730.4|733_841_-_109_9288_1668.95 | api:100160924 | 21 | 79.3 | 3e-13 | similar to AGAP005738-PA
CNUS0000099596.1 | Sense | 1 | 313_419_+_107_96_19.57 |  |  | cel:C47E8.5 | 60 | 238 | 2e-61 | daf-21; abnormal DAuer Formation ; [NAME] molecular chaperone HtpG | |Cellular Processes; [NAME]; Progesterone-mediated oocytematuration [PATH:[NAME]:ko04914];|Cellular Processes; Immune System; Antigen processing andpresentation [[NAME]:[NAME]:ko04612];|Human [NAME]; Cancers; Prostate cancer [[NAME]:[NAME]:ko05215];|Protein Families; Genetic Information Processing; Chaperones andfolding catalysts [BR:ko03110];|Protein Families; Genetic Information Processing; [NAME] system[BR:ko04121]; | |%IPR001404:Heat shock protein Hsp90 : | |GO:0051082:unfolded protein binding |  | |GO:0006457:protein folding
CNUS0000099597.1 | Sense | 4 | 12_121_+_110_240_46.84|428_607_+_180_597_71.61|673_793_+_121_356_63.66|1221_1340_+_120_110_19.89 |  |  | tad:TRIADDRAFT_38294 | 67 | 352 | 3e-95 | heat shock cognate protein 70 ; K03283 heat shock 70kDa protein 1/8 | |Cellular Processes; Immune System; Antigen processing andpresentation [[NAME]:[NAME]:ko04612];|Environmental Information Processing; Membrane Transport; Pores ionchannels|Environmental Information Processing; Signal Transduction; MAPKsignaling pathway [[NAME]:ko04010-Map:ko04010];|Protein Families; Genetic Information Processing; Chaperones andfolding catalysts [BR:ko03110];|Protein Families; Genetic Information Processing; [NAME] system[BR:ko04121]; | |%IPR001023:Heat shock protein Hsp70 :%IPR013126:Heat shock protein 70 | |GO:0005524:ATP binding
CNUS0000099726.1 | Sense | 1 | 1_121_+_121_670_106.8
CNUS0000099772.1 | Sense | 2 | 6163_6276_+_114_280_53.78|6348_6585_+_238_399_35.89 |  |  | aga:AgaP_AGAP011396 | 23 | 75.5 | 3e-11 | AGAP011396-PA |  | |%IPR000879:Guanylin :%IPR001101:[NAME] repeat | |GO:0004601:peroxidase activity|GO:0008047:enzyme activator [NAME]:heme binding |  | |GO:0006118:electron transport|GO:0006979:response to oxidative stress
CNUS0000099828.1 | Sense | 1 | 3_121_+_119_33_5.95 |  |  |  |  |  |  |  |  | |%IPR002048:Calcium-binding EF-hand :%IPR011992:EF-Hand type | |GO:0005509:calcium ion binding
CNUS0000099848.1 | Sense | 5 | 65_181_+_117_136_25.03|367_547_+_181_140_16.48|551_661_+_111_27_5.29|684_793_+_110_138_26.9|1038_1153_+_116_150_27.79 |  |  | xtr:395027 | 31 | 94 | 2e-17 | nolc1; nucleolar and coiled-body phosphoprotein 1 |  | |%IPR007718:SRP40, C-terminal :
CNUS0000100022.1 | Both | 2 | 255_364_+_110_241_43|550_669_+_120_6537_1104.68 | 1 | 550_731_-_182_3741_410.47 | dre:100150592 | 33 | 276 | 5e-72 | similar to transposase domain-containing protein
CNUS0000100067.1 | Sense | 1 | 3723_3841_+_119_101_18.72 |  |  |  |  |  |  |  |  | |%IPR001866:E2 early regulatory protein, N-terminal : | |GO:0003677:DNA binding |  | |GO:0006275:regulation of DNA replication|GO:0006355:regulation of transcription, DNA-dependent|GO:0016032:viral reproduction
CNUS0000100329.1 | Sense | 1 | 184_305_+_122_87_15.76 |  |  | api:100167224 | 49 | 468 | 1e-130 | similar to cation-transporting atpase |  | |%IPR001757:ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter :%IPR004000:[NAME]/actin-like | |GO:0003824:catalytic [NAME]:protein binding|GO:0005524:ATP binding|GO:0015662:ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | |GO:0016020:membrane | |GO:0006810:transport|GO:0008152:metabolic process
CNUS0000100507.1 | Sense | 2 | 184_365_+_182_53_6.53|733_886_+_154_75_10.77 |  |  | [NAME] | 56 | 733 | 0 | hypothetical LOC495336 |  | |%IPR000504:RNA recognition motif, RNP-1 :%IPR002004:Polyadenylate-binding protein/Hyperplastic disc protein | |GO:0000166:nucleotide binding|GO:0003676:nucleic acid binding|GO:0003723:RNA binding
CNUS0000100509.1 | Sense | 5 | 123_236_+_114_450_90.06|251_425_+_175_556_69.07|611_714_+_104_202_45.86|734_914_+_181_138_16.83|1100_1276_+_177_388_47.76 |  |  | xla:380550 | 82 | 788 | 0 | eef1a2; eukaryotic translation elongation factor 1 alpha 2 ; [NAME] elongation factor EF-1 alpha subunit [EC:3.6.5.3] | |Protein Families; Genetic Information Processing; Translationfactors [BR:[NAME] | |%IPR000795:Protein synthesis factor, GTP-binding :%IPR004160:Translation elongation factor EFTu/EF1A, C-terminal | |GO:0003746:translation elongation factor activity|GO:0003924:GTPase activity|GO:0005525:GTP binding | |GO:0005737:cytoplasm | |GO:0006414:translational elongation
CNUS0000100526.1 | Sense | 1 | 245_352_+_108_86_16.77 |  |  | ecb:100057016 | 62 | 367 | 1e-100 | LDHA; lactate dehydrogenase A ; K00016 L-lactate dehydrogenase [EC:1.1.1.27] | |Metabolism; Amino Acid Metabolism; [NAME] metabolism[PATH:[NAME]:ko00272];|Metabolism; Carbohydrate Metabolism; Glycolysis / Gluconeogenesis[PATH:[NAME]:ko00010];|Metabolism; Carbohydrate Metabolism; Propanoate metabolism[PATH:ko00640-Map:ko00640];|Metabolism; Carbohydrate Metabolism; Pyruvate metabolism[PATH:ko00620-Map:[NAME] | |%IPR001236:Lactate/malate dehydrogenase :%IPR001557:L-lactate/malate dehydrogenase | |GO:0003824:catalytic activity|GO:0004459:L-lactate dehydrogenase activity|GO:0016491:oxidoreductase activity|GO:0016616:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | |GO:0005737:cytoplasm | |GO:0005975:carbohydrate metabolic process|GO:0006096:glycolysis|GO:0006100:tricarboxylic acid cycle intermediate metabolic process|GO:0019642:anaerobic glycolysis|GO:0044262:cellular carbohydrate metabolic process
CNUS0000100558.1 | Sense | 3 | 2322_2436_+_115_84_16.43|4637_4749_+_113_121_23.13|4962_5063_+_102_116_25.11 |  |  | tca:659358 | 51 | 1771 | 0 | similar to Myosin heavy chain CG17927-PF ; K10352 myosin heavy chain | |Cellular Processes; Cell Communication; Tight junction[PATH:ko04530-Map:ko04530];|Protein Families; Cellular Processes and Signaling; Cytoskeletonproteins [BR:[NAME] | |%IPR000048:IQ calmodulin-binding region :%IPR001609:[NAME] head, motor region | |GO:0000166:nucleotide binding|GO:0003774:motor activity|GO:0005524:ATP binding | |GO:0016459:[NAME]
CNUS0000101332.1 | Sense | 1 | 123_232_+_110_39_7.47 |  |  | rno:690102 | 79 | 163 | 2e-39 | similar to histone H2A ; K11251 histone H2A | |Human [NAME]; [NAME]; Systemic lupus erythematosus[PATH:[NAME]:ko05322];|Protein Families; Genetic Information Processing; Chromosome[BR:[NAME] | |%IPR002119:Histone H2A :%IPR007125:Histone core | |GO:0003677:DNA binding | |GO:0000786:nucleosome|GO:0005634:nucleus | |GO:0006334:nucleosome assembly|GO:0007001:chromosome organization and biogenesis (sensu Eukaryota)
CNUS0000101384.1 | Both | 1 | 2_112_+_111_155_27.52 | 1 | 1_111_-_111_71_12.43 | pfh:PFHG_04943 | 35 | 81.3 | 4e-14 | predicted protein
CNUS0000101386.1 | Sense | 1 | 385_484_+_100_65_14.47 |  |  | nve:NEMVE_v1g239788 | 98 | 294 | 1e-78 | predicted protein ; [NAME] | |Cellular Processes; [NAME]; [NAME] signaling pathway[PATH:[NAME]:ko04912];|Cellular Processes; [NAME]; Insulin signaling pathway[PATH:ko04910-Map:ko04910];|Cellular Processes; [NAME]; Melanogenesis [[NAME]:[NAME]:ko04916];|Cellular Processes; [NAME]; Long-term potentiation[PATH:[NAME]:ko04720];|Cellular Processes; Sensory System; Olfactory transduction[PATH:[NAME]:ko04740];|Environmental Information Processing; Signal Transduction; Calciumsignaling pathway [[NAME]:ko04020-Map:ko04020];|Environmental Information Processing; Signal Transduction;Phosphatidylinositol signaling system [[NAME]:ko04070-Map:ko04070];|Human Diseases; Cancers; [NAME] [[NAME]:ko05214-Map:ko05214];|Human Diseases; Neurodegenerative Diseases; Alzheimer's disease[PATH:[NAME]:ko05010]; | |%IPR002048:Calcium-binding EF-hand :%IPR011992:EF-Hand type | |GO:0005509:calcium ion binding
CNUS0000101414.1 | Both | 2 | 243_365_+_123_7863_1262.66|733_834_+_102_15091_2849.28 | 1 | 733_837_-_105_7459_1400.85 | api:100160924 | 21 | 103 | 2e-20 | similar to AGAP005738-PA |  | |%IPR007527:Zinc finger, SWIM-type : | |GO:0008270:zinc ion binding
CNUS0000101602.1 | Sense | 4 | 1_113_+_113_1941_378.18|184_358_+_175_1987_249.53|550_669_+_120_389_70.57|672_792_+_121_799_145.03 |  |  | xtr:100216108 | 100 | 591 | 1e-167 | hypothetical protein LOC100216108 |  | |%IPR000626:[NAME] : |  |  | |GO:0006464:protein modification process
CNUS0000101619.1 | Sense | 1 | 4_118_+_115_17_3.3 |  |  | xtr:549623 | 100 | 162 | 4e-39 | TGas006m08.1; hypothetical protein LOC549623 ; K11254 histone H4 | |Human [NAME]; [NAME]; Systemic lupus erythematosus[PATH:[NAME]:ko05322];|Protein Families; Genetic Information Processing; Chromosome[BR:[NAME] | |%IPR001951:Histone H4 :%IPR004823:TATA box binding protein associated factor (TAF) | |GO:0003677:DNA binding|GO:0016986:transcription initiation factor activity | |GO:0000786:nucleosome|GO:0005634:nucleus | |GO:0006334:nucleosome assembly|GO:0006352:transcription initiation|GO:0007001:chromosome organization and biogenesis (sensu Eukaryota)
CNUS0000101906.1 | Both | 3 | 980_1096_+_117_13429_2225.68|1099_1219_+_121_3860_629.06|1343_1462_+_120_1686_270.3 | 1 | 402_533_-_132_3382_504.77 | dre:100148209 | 29 | 359 | 5e-97 | similar to pol polyprotein |  | |%IPR001878:Zinc finger, CCHC-type :%IPR007259:Spc97/Spc98 | |GO:0003676:nucleic acid binding|GO:0004190:aspartic-type endopeptidase activity|GO:0008270:zinc ion binding | |GO:0000922:spindle pole|GO:0005815:microtubule organizing center | |GO:0000226:microtubule cytoskeleton organization and biogenesis|GO:0006508:proteolysis
CNUS0000102098.1 | Sense | 1 | 316_425_+_110_18_3.92
CNUS0000102106.1 | Sense | 1 | 68_177_+_110_18_3.61 |  |  | tca:658376 | 70 | 184 | 1e-45 | similar to splicing factor 3B, 14 kDa subunit |  | |%IPR000504:RNA recognition motif, RNP-1 :%IPR012677:Nucleotide-binding, alpha-beta plait | |GO:0000166:nucleotide binding|GO:0003676:nucleic acid binding
CNUS0000102381.1 | Sense | 1 | [NAME]
CNUS0000102460.1 | Sense | 2 | 192_426_+_235_13728_1240.86|428_648_+_221_7170_697.67 |  |  |  |  |  |  |  |  | |%IPR002952:Eggshell protein :
CNUS0000102514.1 | Sense | 1 | 979_1097_+_119_90_15.95 |  |  | xla:447398 | 80 | 686 | 0 | MGC84749 protein |  | |%IPR000597:Ribosomal protein L3 :%IPR009000:Translation elongation and initiation factors/Ribosomal, beta-barrel | |GO:0003735:structural constituent of ribosome | |GO:0005622:intracellular|GO:0005840:ribosome | |GO:0006412:translation
CNUS0000102556.1 | Sense | 1 | 313_419_+_107_19_3.99 |  |  | xtr:548437 | 49 | 222 | 9e-57 | MGC107865 protein |  | |%IPR005024:Snf7 : |  |  | |GO:0015031:protein transport
CNUS0000102649.1 | Sense | 2 | 124_241_+_118_78_13.9|244_444_+_201_1008_109.22 |  |  | [NAME] | 62 | 154 | 9e-37 | similar to cathepsin B preproprotein |  | |%IPR000169:Peptidase, cysteine peptidase active site :%IPR000668:Peptidase C1A, papain C-terminal | |GO:0004197:cysteine-type endopeptidase activity|GO:0008234:cysteine-type peptidase activity |  | |GO:0006508:proteolysis
CNUS0000102652.1 | Sense | 1 | 733_853_+_121_764_136.29 |  |  | tad:TRIADDRAFT_63119 | 50 | 315 | 2e-84 | expressed hypothetical protein ; K01363 cathepsin B [EC:3.4.22.1] | |Cellular Processes; Immune System; Antigen processing andpresentation [[NAME]:[NAME]:ko04612];|Protein Families; Metabolism; Peptidases [BR:ko01002]; | |%IPR000169:Peptidase, cysteine peptidase active site :%IPR000668:Peptidase C1A, papain C-terminal | |GO:0004197:cysteine-type endopeptidase activity|GO:0008234:cysteine-type peptidase activity |  | |GO:0006508:proteolysis|GO:0050790:regulation of catalytic activity
CNUS0000102748.1 | Sense | 1 | 186_286_+_101_16_3.4 |  |  | aga:AgaP_AGAP001306 | 69 | 230 | 1e-59 | AGAP001306-PA ; K05755 actin related protein 2/3 complex, subunit 4 | |Cellular Processes; Cell Motility; Regulation of actin cytoskeleton[PATH:[NAME]:ko04810];|Protein Families; Cellular Processes and Signaling; Cytoskeletonproteins [BR:[NAME] | |%IPR008384:ARP23 complex 20 kDa subunit : |  | |GO:0005856:cytoskeleton | |GO:0030041:actin filament polymerization
CNUS0000102999.1 | Sense | 1 | 188_303_+_116_240_43.6
CNUS0000103167.1 | Sense | 1 | 566_667_+_102_47_9.64 |  |  | aga:AgaP_AGAP004002 | 73 | 790 | 0 | AGAP004002-PA ; [NAME] GroEL | |Human Diseases; [NAME]; Type I diabetes mellitus[PATH:[NAME]:ko04940];|Human Diseases; Neurodegenerative Diseases; Prion disease[PATH:ko05060-Map:];|Protein Families; Genetic Information Processing; Chaperones andfolding catalysts [BR:[NAME] | |%IPR001844:[NAME] Cpn60 :%IPR002423:[NAME] Cpn60/TCP-1 | |GO:0005515:protein binding|GO:0005524:ATP binding|GO:0051082:unfolded protein binding |  | |GO:0006457:protein folding|GO:0044267:cellular protein metabolic process
CNUS0000103180.1 | Sense | 2 | 2_119_+_118_27_4.73|248_364_+_117_53_10.15 |  |  | dya:Dyak_GE21228 | 76 | 250 | 2e-65 | Dyak_RpS9; GE21228 gene product from transcript GE21228-RA |  | |%IPR001912:Ribosomal protein S4 :%IPR002942:RNA-binding S4 | |GO:0003723:RNA binding|GO:0003735:structural constituent of ribosome|GO:0019843:rRNA binding | |GO:0005622:intracellular|GO:0015935:small ribosomal subunit|GO:0030529:ribonucleoprotein complex | |GO:0006412:translation
CNUS0000103304.1 | Sense | 1 | 123_278_+_156_535_68.18
CNUS0000103305.1 | AntiSense |  |  | 1 | 551_670_-_120_344_56.9 | dre:100150592 | 34 | 198 | 5e-49 | similar to transposase domain-containing protein
CNUS0000103313.1 | Sense | 1 | 62_182_+_121_253_45.52 |  |  |  |  |  |  |  |  | |%IPR012615:Trematode Eggshell Synthesis :
CNUS0000103463.1 | Both | 1 | 366_485_+_120_1334_217.9 | 1 | 366_487_-_122_601_96.48
CNUS0000103514.1 | Sense | 2 | 247_365_+_119_1326_212.82|489_608_+_120_2353_384.14 |  |  | mmu:18973 | 57 | 989 | 0 | Pole; polymerase (DNA directed), epsilon (EC:2.7.7.7); [NAME] DNA polymerase epsilon subunit 1 [EC:2.7.7.7] | |Genetic Information Processing; Replication and Repair; DNAreplication [PATH:[NAME]:ko03030];|Genetic Information Processing; Replication and Repair; Nucleotideexcision repair [PATH:ko03420-Map:ko03420];|Protein Families; Genetic Information Processing; DNA repair andrecombination proteins [BR:ko03400];|Protein Families; Genetic Information Processing; DNA replicationproteins [BR:[NAME] | |%IPR000477:RNA-directed DNA polymerase (reverse transcriptase) :%IPR001969:Peptidase aspartic, active site | |GO:0000166:nucleotide binding|GO:0003676:nucleic acid binding|GO:0003723:RNA binding|GO:0003887:DNA-directed DNA polymerase activity|GO:0003964:RNA-directed DNA polymerase activity|GO:0004190:aspartic-type endopeptidase activity |  | |GO:0006139:nucleobase, nucleoside, nucleotide and nucleic acid metabolic process|GO:0006260:DNA replication|GO:0006278:RNA-dependent DNA replication|GO:0006508:proteolysis
[NAME] | Sense | 1 | 248_405_+_158_108_15.36 |  |  |  |  |  |  |  |  | |%IPR003599:Immunoglobulin subtype :%IPR007110:Immunoglobulin-like
CNUS0000103690.1 | Sense | 2 | 488_591_+_104_91_19.7|2075_2195_+_121_40_7.06 |  |  | mcc:715422 | 26 | 106 | 5e-21 | MYLK; [NAME] chain kinase ; [NAME]chain kinase [EC:2.7.11.18] | |Cellular Processes; Cell Communication; Focal adhesion[PATH:ko04510-Map:ko04510];|Cellular Processes; Cell Motility; Regulation of actin cytoskeleton[PATH:[NAME]:ko04810];|Environmental Information Processing; Signal Transduction; Calciumsignaling pathway [[NAME]:ko04020-Map:ko04020];|Protein Families; Metabolism; Protein kinases [BR:ko01001]; | |%IPR003598:Immunoglobulin subtype 2 :%IPR003599:Immunoglobulin subtype
CNUS0000103737.1 | Sense | 10 | 1_122_+_122_1043_185.46|127_304_+_178_778_94.46|306_427_+_122_548_95.81|675_789_+_115_423_79.97|803_974_+_172_845_107.4|1282_1400_+_119_521_95.58|1465_1580_+_116_228_43.63|1586_1708_+_123_1770_321.04|2019_2134_+_116_963_181.54|3180_3280_+_101_49_11.39 |  |  | rno:191572 | 24 | 116 | 7e-24 | Ahnak; AHNAK nucleoprotein
CNUS0000103805.1 | Sense | 1 | 191_304_+_114_98_17.86 |  |  | tad:TRIADDRAFT_63119 | 44 | 213 | 8e-54 | expressed hypothetical protein ; K01363 cathepsin B [EC:3.4.22.1] | |Cellular Processes; Immune System; Antigen processing andpresentation [[NAME]:[NAME]:ko04612];|Protein Families; Metabolism; Peptidases [BR:ko01002]; | |%IPR000668:Peptidase C1A, papain C-terminal :%IPR007087:Zinc finger, [NAME]-type | |GO:0003676:nucleic acid binding|GO:0004197:cysteine-type endopeptidase activity|GO:0008234:cysteine-type peptidase activity|GO:0008270:zinc ion binding | |GO:0005622:intracellular | |GO:0006508:proteolysis|GO:0050790:regulation of catalytic activity
CNUS0000103808.1 | Sense | 2 | 432_548_+_117_648_117.82|795_914_+_120_870_157.55 |  |  | tad:TRIADDRAFT_63119 | 47 | 338 | 3e-91 | expressed hypothetical protein ; K01363 cathepsin B [EC:3.4.22.1] | |Cellular Processes; Immune System; Antigen processing andpresentation [[NAME]:[NAME]:ko04612];|Protein Families; Metabolism; Peptidases [BR:ko01002]; | |%IPR000169:Peptidase, cysteine peptidase active site :%IPR000668:Peptidase C1A, papain C-terminal | |GO:0004197:cysteine-type endopeptidase activity|GO:0008234:cysteine-type peptidase activity |  | |GO:0006508:proteolysis|GO:0050790:regulation of catalytic activity
CNUS0000103844.1 | Sense | 1 | 2214_2315_+_102_14_3.17 |  |  |  |  |  |  |  |  | |%IPR000253:Forkhead-associated :%[NAME]:HMG-I and HMG-Y, DNA-binding
CNUS0000103979.1 | Sense | 1 | 1_181_+_181_121_15.09 |  |  | tca:663390 | 52 | 68.6 | 9e-11 | similar to CG4944-PB, isoform B |  | |%IPR001152:Thymosin beta-4 : | [NAME]actin binding | |GO:0005737:cytoplasm | |GO:0007010:cytoskeleton organization and biogenesis
CNUS0000104121.1 | Sense | 1 | 2_121_+_120_465_78.5
CNUS0000104301.1 | Sense | 2 | 63_170_+_108_269_55.57|854_977_+_124_69_12.66 |  |  | cin:100176110 | 21 | 141 | 2e-31 | similar to surfactant B protein, putative |  | |%IPR003119:Saposin type A :%IPR007856:Saposin-like type B, 1 |  | |GO:0005764:lysosome | |GO:0006629:lipid metabolic process|GO:0006665:sphingolipid metabolic process
CNUS0000104833.1 | Sense | 1 | 123_243_+_121_42_7.55 |  |  | ptr:451286 | 60 | 287 | 4e-76 | STIP1; stress-induced-phosphoprotein 1 ; K09553 stress-induced-phosphoprotein 1 | |Protein Families; Genetic Information Processing; Chaperones andfolding catalysts [BR:[NAME] | |%IPR001440:Tetratricopeptide TPR-1 :%IPR011990:Tetratricopeptide-like helical | |GO:0005488:binding
CNUS0000105050.1 | Sense | 1 | 496_609_+_114_195_37.62 |  |  |  |  |  |  |  |  | |%IPR012615:Trematode Eggshell Synthesis :
CNUS0000105051.1 | Sense | 1 | 124_243_+_120_161_28.99
CNUS0000105138.1 | Sense | 1 | 186_296_+_111_254_51.65
CNUS0000105139.1 | Sense | 1 | 431_547_+_117_162_30.41 |  |  |  |  |  |  |  |  | |%IPR012615:Trematode Eggshell Synthesis :
CNUS0000105206.1 | Sense | 2 | 306_411_+_106_170_34.57|672_792_+_121_445_78.98 |  |  | tca:658974 | 43 | 278 | 2e-73 | similar to Cathepsin L precursor ([NAME] proteinase 1) |  | |%IPR000169:Peptidase, cysteine peptidase active site :%IPR000668:Peptidase C1A, papain C-terminal | |GO:0004197:cysteine-type endopeptidase activity|GO:0008234:cysteine-type peptidase activity |  | |GO:0006508:proteolysis
CNUS0000105278.1 | Sense | 3 | 197_364_+_168_7879_926.19|367_487_+_121_1195_183.92|733_851_+_119_14235_2331.92 |  |  | api:100160924 | 21 | 71.6 | 6e-11 | similar to AGAP005738-PA
CNUS0000105314.1 | Sense | 1 | 2268_2379_+_112_49_9.13 |  |  | bhy:BHWA1_01395 | 19 | 130 | 6e-28 | hypothetical protein
CNUS0000105745.1 | Sense | 1 | 245_365_+_121_434_70.57
CNUS0000105791.1 | AntiSense |  |  | 2 | 733_853_-_121_323_53.06|858_975_-_118_344_57.53 | pfh:PFHG_04943 | 36 | 81.3 | 9e-14 | predicted protein
CNUS0000105848.1 | Sense | 1 | 611_771_+_161_41_5.27
CNUS0000106020.1 | AntiSense |  |  | 2 | 307_426_-_120_2217_372.77|1038_1149_-_112_5345_950.51
CNUS0000106072.1 | Sense | 1 | 245_357_+_113_68_13.26 |  |  | tca:662923 | 45 | 122 | 4e-27 | similar to [NAME] 1 light chain |  | |%IPR002048:Calcium-binding EF-hand :%IPR011992:EF-Hand type | |GO:0005509:calcium ion binding
CNUS0000106117.1 | Sense | 1 | 9_110_+_102_60_13.54 |  |  |  |  |  |  |  |  | |%IPR002048:Calcium-binding EF-hand :%IPR011992:EF-Hand type | |GO:0005509:calcium ion binding
CNUS0000106237.1 | Sense | 1 | 64_164_+_101_12_2.6 |  |  | spu:577360 | 30 | 96.3 | 9e-19 | hypothetical LOC577360 |  | |%IPR002999:[NAME] : | |GO:0003676:nucleic acid binding
CNUS0000106289.1 | Sense | 2 | 244_365_+_122_7856_1271.65|733_846_+_114_9141_1552.88 |  |  | api:100160924 | 20 | 93.2 | 3e-17 | similar to AGAP005738-PA
CNUS0000106549.1 | Sense | 1 | 129_237_+_109_264_53.54 |  |  | spu:591071 | 64 | 122 | 5e-27 | hypothetical LOC591071 |  | |%IPR000819:[NAME], leucyl aminopeptidase, C-terminal : | |GO:0004177:aminopeptidase activity | |GO:0005622:intracellular | |GO:0006508:proteolysis
CNUS0000106614.1 | Sense | 2 | 184_365_+_182_356745_46165.48|369_488_+_120_76875_13266.14
CNUS0000106642.1 | Sense | 1 | 1_121_+_121_969_173 |  |  |  |  |  |  |  |  | |%IPR000298:Cytochrome c oxidase, subunit III : | |GO:0004129:cytochrome-c oxidase activity | |GO:0016020:membrane | |GO:0006118:electron transport
CNUS0000106734.1 | Sense | 1 | 123_243_+_121_270_47.23 |  |  | cre:CHLREDRAFT_190125 | 54 | 88.6 | 8e-17 | COX2B; cytochrome c oxidase subunit II, protein IIb of split subunit ; [NAME] cytochrome c oxidase subunit II [EC:1.9.3.1] | |Human [NAME]; Neurodegenerative Diseases; Alzheimer's disease[PATH:[NAME]:ko05010];|Human Diseases; Neurodegenerative Diseases; Huntington's disease[PATH:ko05016-Map:ko05016];|Human Diseases; Neurodegenerative Diseases; Parkinson's disease[PATH:ko05012-Map:ko05012];|Metabolism; Energy Metabolism; Oxidative phosphorylation[PATH:ko00190-Map:ko00190]; | |%IPR001505:Copper centre Cu(A) :%IPR002429:Cytochrome c oxidase subunit II C-terminal | |GO:0004129:cytochrome-c oxidase activity|GO:0005507:copper ion binding | |GO:0016020:membrane | |GO:0006118:electron transport
CNUS0000106848.1 | Sense | 1 | 69_183_+_115_1066_181.72
CNUS0000106850.1 | Sense | 1 | 1_181_+_181_1741_207.27 |  |  |  |  |  |  |  |  | |%IPR000298:Cytochrome c oxidase, subunit III : | |GO:0004129:cytochrome-c oxidase activity | |GO:0016020:membrane | |GO:0006118:electron transport
CNUS0000106891.1 | Sense | 1 | 64_179_+_116_166_31.3 |  |  | cel:COX1 | 40 | 75.9 | 7e-13 | cytochrome c oxidase subunit I ; K02256 cytochrome c oxidase subunit I [EC:1.9.3.1] | |Human [NAME]; Neurodegenerative Diseases; Alzheimer's disease[PATH:[NAME]:ko05010];|Human Diseases; Neurodegenerative Diseases; Huntington's disease[PATH:ko05016-Map:ko05016];|Human Diseases; Neurodegenerative Diseases; Parkinson's disease[PATH:ko05012-Map:ko05012];|Metabolism; Energy Metabolism; Oxidative phosphorylation[PATH:ko00190-Map:ko00190]; | |%IPR000883:Cytochrome c oxidase, subunit I :%IPR001694:Respiratory-chain NADH dehydrogenase, subunit 1 | |GO:0005506:iron ion binding|GO:0020037:heme binding | |GO:0016020:membrane|GO:0016021:integral to membrane | |GO:0006118:electron transport|GO:0009060:aerobic respiration
CNUS0000106909.1 | Sense | 1 | 62_178_+_117_67_12.46 |  |  | acr:Acry_2166 | 67 | 71.6 | 1e-11 | cytochrome-c oxidase (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] | |Metabolism; Energy Metabolism; Oxidative phosphorylation[PATH:ko00190-Map:ko00190]; | |%IPR000883:Cytochrome c oxidase, subunit I : | |GO:0005506:iron ion binding|GO:0020037:heme binding | |GO:0016021:integral to membrane | |GO:0006118:electron transport|GO:0009060:aerobic respiration
CNUS0000106914.1 | Sense | 1 | 1_213_+_213_8384_838.58
CNUS0000106938.1 | Sense | 1 | 63_179_+_117_114_20.69 |  |  |  |  |  |  |  |  | |%IPR000568:ATPase, F0 complex, subunit A : | |GO:0016820:hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | |GO:0016020:membrane|GO:0016469:proton-transporting two-sector ATPase complex | |GO:0015992:proton transport
CNUS0000106941.1 | Sense | 1 | 126_242_+_117_39_7.23 |  |  |  |  |  |  |  |  | |%IPR000298:Cytochrome c oxidase, subunit III : | |GO:0004129:cytochrome-c oxidase activity | |GO:0016020:membrane | |GO:0006118:electron transport
CNUS0000106942.1 | Sense | 1 | 246_363_+_118_877_163.16 |  |  | cin:806118 | 53 | 154 | 9e-37 | COX1; cytochrome c oxidase subunit I |  | |%IPR000883:Cytochrome c oxidase, subunit I : | |GO:0005506:iron ion binding|GO:0020037:heme binding | |GO:0016021:integral to membrane | |GO:0006118:electron transport|GO:0009060:aerobic respiration
CNUS0000106945.1 | Sense | 1 | 123_226_+_104_255_51.55 |  |  | cre:CHLREDRAFT_190125 | 53 | 78.2 | 1e-13 | COX2B; cytochrome c oxidase subunit II, protein IIb of split subunit ; [NAME] cytochrome c oxidase subunit II [EC:1.9.3.1] | |Human [NAME]; Neurodegenerative Diseases; Alzheimer's disease[PATH:[NAME]:ko05010];|Human Diseases; Neurodegenerative Diseases; Huntington's disease[PATH:ko05016-Map:ko05016];|Human Diseases; Neurodegenerative Diseases; Parkinson's disease[PATH:ko05012-Map:ko05012];|Metabolism; Energy Metabolism; Oxidative phosphorylation[PATH:ko00190-Map:ko00190]; | |%IPR001505:Copper centre Cu(A) :%IPR002429:Cytochrome c oxidase subunit II C-terminal | |GO:0004129:cytochrome-c oxidase activity|GO:0005507:copper ion binding | |GO:0016020:membrane | |GO:0006118:electron transport
CNUS0000106963.1 | Sense | 1 | 430_548_+_119_1077_179.03
CNUS0000106982.1 | Sense | 1 | 123_243_+_121_257_45.04 |  |  | cre:CHLREDRAFT_190125 | 53 | 88.2 | 1e-16 | COX2B; cytochrome c oxidase subunit II, protein IIb of split subunit ; [NAME] cytochrome c oxidase subunit II [EC:1.9.3.1] | |Human [NAME]; Neurodegenerative Diseases; Alzheimer's disease[PATH:[NAME]:ko05010];|Human Diseases; Neurodegenerative Diseases; Huntington's disease[PATH:ko05016-Map:ko05016];|Human Diseases; Neurodegenerative Diseases; Parkinson's disease[PATH:ko05012-Map:ko05012];|Metabolism; Energy Metabolism; Oxidative phosphorylation[PATH:ko00190-Map:ko00190]; | |%IPR001505:Copper centre Cu(A) :%IPR002429:Cytochrome c oxidase subunit II C-terminal | |GO:0004129:cytochrome-c oxidase activity|GO:0005507:copper ion binding | |GO:0016020:membrane | |GO:0006118:electron transport
CNUS0000106985.1 | Sense | 1 | 62_178_+_117_67_12.46 |  |  | acr:Acry_2166 | 67 | 71.6 | 1e-11 | cytochrome-c oxidase (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] | |Metabolism; Energy Metabolism; Oxidative phosphorylation[PATH:ko00190-Map:ko00190]; | |%IPR000883:Cytochrome c oxidase, subunit I : | |GO:0005506:iron ion binding|GO:0020037:heme binding | |GO:0016021:integral to membrane | |GO:0006118:electron transport|GO:0009060:aerobic respiration
CNUS0000106989.1 | Sense | 1 | 62_181_+_120_64_11.43 |  |  | acr:Acry_2166 | 67 | 71.6 | 1e-11 | cytochrome-c oxidase (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] | |Metabolism; Energy Metabolism; Oxidative phosphorylation[PATH:ko00190-Map:ko00190]; | |%IPR000883:Cytochrome c oxidase, subunit I : | |GO:0005506:iron ion binding|GO:0020037:heme binding | |GO:0016021:integral to membrane | |GO:0006118:electron transport|GO:0009060:aerobic respiration
CNUS0000106993.1 | Sense | 1 | 123_243_+_121_270_47.23 |  |  | cre:CHLREDRAFT_190125 | 54 | 88.6 | 8e-17 | COX2B; cytochrome c oxidase subunit II, protein IIb of split subunit ; [NAME] cytochrome c oxidase subunit II [EC:1.9.3.1] | |Human [NAME]; Neurodegenerative Diseases; Alzheimer's disease[PATH:[NAME]:ko05010];|Human Diseases; Neurodegenerative Diseases; Huntington's disease[PATH:ko05016-Map:ko05016];|Human Diseases; Neurodegenerative Diseases; Parkinson's disease[PATH:ko05012-Map:ko05012];|Metabolism; Energy Metabolism; Oxidative phosphorylation[PATH:ko00190-Map:ko00190]; | |%IPR001505:Copper centre Cu(A) :%IPR002429:Cytochrome c oxidase subunit II C-terminal | |GO:0004129:cytochrome-c oxidase activity|GO:0005507:copper ion binding | |GO:0016020:membrane | |GO:0006118:electron transport
CNUS0000106995.1 | Sense | 1 | 184_304_+_121_472_83.62 |  |  |  |  |  |  |  |  | |%IPR001505:Copper centre Cu(A) :%IPR002429:Cytochrome c oxidase subunit II C-terminal | |GO:0004129:cytochrome-c oxidase activity|GO:0005507:copper ion binding | |GO:0016020:membrane | |GO:0006118:electron transport
CNUS0000106998.1 | Sense | 1 | 123_243_+_121_270_47.23 |  |  | cre:CHLREDRAFT_190125 | 54 | 88.6 | 8e-17 | COX2B; cytochrome c oxidase subunit II, protein IIb of split subunit ; [NAME] cytochrome c oxidase subunit II [EC:1.9.3.1] | |Human [NAME]; Neurodegenerative Diseases; Alzheimer's disease[PATH:[NAME]:ko05010];|Human Diseases; Neurodegenerative Diseases; Huntington's disease[PATH:ko05016-Map:ko05016];|Human Diseases; Neurodegenerative Diseases; Parkinson's disease[PATH:ko05012-Map:ko05012];|Metabolism; Energy Metabolism; Oxidative phosphorylation[PATH:ko00190-Map:ko00190]; | |%IPR001505:Copper centre Cu(A) :%IPR002429:Cytochrome c oxidase subunit II C-terminal | |GO:0004129:cytochrome-c oxidase activity|GO:0005507:copper ion binding | |GO:0016020:membrane | |GO:0006118:electron transport
CNUS0000107047.1 | Sense | 1 | 256_487_+_232_77900_7712.72
CNUS0000107052.1 | Sense | 1 | 123_243_+_121_257_45.04 |  |  | cre:CHLREDRAFT_190125 | 54 | 88.6 | 8e-17 | COX2B; cytochrome c oxidase subunit II, protein IIb of split subunit ; [NAME] cytochrome c oxidase subunit II [EC:1.9.3.1] | |Human [NAME]; Neurodegenerative Diseases; Alzheimer's disease[PATH:[NAME]:ko05010];|Human Diseases; Neurodegenerative Diseases; Huntington's disease[PATH:ko05016-Map:ko05016];|Human Diseases; Neurodegenerative Diseases; Parkinson's disease[PATH:ko05012-Map:ko05012];|Metabolism; Energy Metabolism; Oxidative phosphorylation[PATH:ko00190-Map:ko00190]; | |%IPR001505:Copper centre Cu(A) :%IPR002429:Cytochrome c oxidase subunit II C-terminal | |GO:0004129:cytochrome-c oxidase activity|GO:0005507:copper ion binding | |GO:0016020:membrane | |GO:0006118:electron transport
CNUS0000107054.1 | Sense | 1 | 245_365_+_121_384_65.66 |  |  | cin:806118 | 66 | 152 | 3e-36 | COX1; cytochrome c oxidase subunit I |  | |%IPR000883:Cytochrome c oxidase, subunit I : | |GO:0005506:iron ion binding|GO:0020037:heme binding | |GO:0016021:integral to membrane | |GO:0006118:electron transport|GO:0009060:aerobic respiration
CNUS0000107060.1 | Sense | 1 | 184_365_+_182_356745_46165.48
CNUS0000107071.1 | Sense | 1 | 123_264_+_142_452_68.59 |  |  | cre:CHLREDRAFT_190125 | 56 | 87 | 2e-16 | COX2B; cytochrome c oxidase subunit II, protein IIb of split subunit ; [NAME] cytochrome c oxidase subunit II [EC:1.9.3.1] | |Human [NAME]; Neurodegenerative Diseases; Alzheimer's disease[PATH:[NAME]:ko05010];|Human Diseases; Neurodegenerative Diseases; Huntington's disease[PATH:ko05016-Map:ko05016];|Human Diseases; Neurodegenerative Diseases; Parkinson's disease[PATH:ko05012-Map:ko05012];|Metabolism; Energy Metabolism; Oxidative phosphorylation[PATH:ko00190-Map:ko00190]; | |%IPR001505:Copper centre Cu(A) :%IPR002429:Cytochrome c oxidase subunit II C-terminal | |GO:0004129:cytochrome-c oxidase activity|GO:0005507:copper ion binding | |GO:0016020:membrane | |GO:0006118:electron transport
CNUS0000107073.1 | Both | 1 | 674_792_+_119_1265_208.18 | 2 | 252_365_-_114_121_20.92|675_792_-_118_752_122.62
CNUS0000107075.1 | Sense | 1 | 189_303_+_115_124_22.79 |  |  |  |  |  |  |  |  | |%IPR000568:ATPase, F0 complex, subunit A : | |GO:0016820:hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | |GO:0016020:membrane|GO:0016469:proton-transporting two-sector ATPase complex | |GO:0015992:proton transport
CNUS0000107080.1 | Sense | 1 | 433_549_+_117_97_18.18 |  |  |  |  |  |  |  |  | |%IPR000568:ATPase, F0 complex, subunit A :%IPR001750:NADH/Ubiquinone/plastoquinone (complex I) | |GO:0008137:NADH dehydrogenase (ubiquinone) activity|GO:0016820:hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | |GO:0016020:membrane|GO:0016469:proton-transporting two-sector ATPase complex | |GO:0015992:proton [NAME]:ATP synthesis coupled electron transport|GO:0045454:cell redox homeostasis
CNUS0000107081.1 | Both | 1 | 185_304_+_120_1839_300.5 | 1 | 184_304_-_121_870_139.89
CNUS0000107089.1 | Sense | 1 | 63_179_+_117_122_22.07 |  |  |  |  |  |  |  |  | |%IPR000568:ATPase, F0 complex, subunit A :%IPR001694:Respiratory-chain NADH dehydrogenase, subunit 1 | |GO:0016820:hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | |GO:0016020:membrane|GO:0016469:proton-transporting two-sector ATPase complex | |GO:0006118:electron transport|GO:0015992:proton transport
CNUS0000107091.1 | Sense | 1 | 63_179_+_117_115_20.9 |  |  |  |  |  |  |  |  | |%IPR000568:ATPase, F0 complex, subunit A : | |GO:0016820:hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | |GO:0016020:membrane|GO:0016469:proton-transporting two-sector ATPase complex | |GO:0015992:proton transport
CNUS0000107098.1 | Sense | 1 | 309_425_+_117_39_7.23 |  |  |  |  |  |  |  |  | |%IPR001750:NADH/Ubiquinone/plastoquinone (complex I) : | |GO:0008137:NADH dehydrogenase (ubiquinone) activity |  | |GO:0042773:ATP synthesis coupled electron transport
CNUS0000107108.1 | Sense | 1 | 245_353_+_109_40_7.91 |  |  |  |  |  |  |  |  | |%IPR000298:Cytochrome c oxidase, subunit III :%IPR001750:NADH/Ubiquinone/plastoquinone (complex I) | |GO:0004129:cytochrome-c oxidase activity|GO:0008137:NADH dehydrogenase (ubiquinone) activity | |GO:0016020:membrane | |GO:0006118:electron [NAME]:ATP synthesis coupled electron transport
CNUS0000107114.1 | Sense | 1 | 245_365_+_121_609_104.19 |  |  | cin:806118 | 66 | 165 | 5e-40 | COX1; cytochrome c oxidase subunit I |  | |%IPR000883:Cytochrome c oxidase, subunit I : | |GO:0005506:iron ion binding|GO:0020037:heme binding | |GO:0016021:integral to membrane | |GO:0006118:electron transport|GO:0009060:aerobic respiration
CNUS0000107119.1 | Sense | 1 | 126_305_+_180_371_44.31 |  |  | cin:806118 | 64 | 156 | 2e-37 | COX1; cytochrome c oxidase subunit I |  | |%IPR000883:Cytochrome c oxidase, subunit I : | |GO:0005506:iron ion binding|GO:0020037:heme binding | |GO:0016021:integral to membrane | |GO:0006118:electron transport|GO:0009060:aerobic respiration
CNUS0000107126.1 | Sense | 1 | 184_302_+_119_758_138.75 |  |  |  |  |  |  |  |  | |%IPR000298:Cytochrome c oxidase, subunit III : | |GO:0004129:cytochrome-c oxidase activity | |GO:0016020:membrane | |GO:0006118:electron transport
CNUS0000107185.1 | Sense | 2 | 1_121_+_121_969_173|493_607_+_115_155_28.55 |  |  |  |  |  |  |  |  | |%IPR000298:Cytochrome c oxidase, subunit III :%IPR000568:ATPase, F0 complex, subunit A | |GO:0004129:cytochrome-c oxidase activity|GO:0016820:hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | |GO:0016020:membrane|GO:0016469:proton-transporting two-sector ATPase complex | |GO:0006118:electron transport|GO:0015992:proton transport
CNUS0000107187.1 | Sense | 1 | 1_182_+_182_555407_66083.34
CNUS0000107188.1 | Sense | 1 | 1_906_+_906_32111_757.81
CNUS0000107189.1 | Sense | 2 | 63_182_+_120_108_19.02|186_302_+_117_155_28.12 |  |  |  |  |  |  |  |  | |%IPR000568:ATPase, F0 complex, subunit A :%IPR001694:Respiratory-chain NADH dehydrogenase, subunit 1 | |GO:0016820:hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | |GO:0016020:membrane|GO:0016469:proton-transporting two-sector ATPase complex | |GO:0006118:electron transport|GO:0015992:proton transport
CNUS0000107191.1 | Sense | 1 | 245_361_+_117_44_8.25 |  |  |  |  |  |  |  |  | |%IPR001750:NADH/Ubiquinone/plastoquinone (complex I) : | |GO:0008137:NADH dehydrogenase (ubiquinone) activity |  | |GO:0042773:ATP synthesis coupled electron transport
CNUS0000107204.1 | Sense | 1 | 184_304_+_121_196_33.66 |  |  | cre:CHLREDRAFT_190125 | 54 | 88.6 | 8e-17 | COX2B; cytochrome c oxidase subunit II, protein IIb of split subunit ; [NAME] cytochrome c oxidase subunit II [EC:1.9.3.1] | |Human [NAME]; Neurodegenerative Diseases; Alzheimer's disease[PATH:[NAME]:ko05010];|Human Diseases; Neurodegenerative Diseases; Huntington's disease[PATH:ko05016-Map:ko05016];|Human Diseases; Neurodegenerative Diseases; Parkinson's disease[PATH:ko05012-Map:ko05012];|Metabolism; Energy Metabolism; Oxidative phosphorylation[PATH:ko00190-Map:ko00190]; | |%IPR000883:Cytochrome c oxidase, subunit I :%IPR001505:Copper centre Cu(A) | |GO:0004129:cytochrome-c oxidase activity|GO:0005506:iron ion binding|GO:0005507:copper ion binding|GO:0020037:heme binding | |GO:0016020:membrane|GO:0016021:integral to membrane | |GO:0006118:electron transport|GO:0009060:aerobic respiration
CNUS0000107244.1 | Sense | 1 | 123_243_+_121_270_47.23 |  |  | cre:CHLREDRAFT_190125 | 54 | 88.6 | 8e-17 | COX2B; cytochrome c oxidase subunit II, protein IIb of split subunit ; [NAME] cytochrome c oxidase subunit II [EC:1.9.3.1] | |Human [NAME]; Neurodegenerative Diseases; Alzheimer's disease[PATH:[NAME]:ko05010];|Human Diseases; Neurodegenerative Diseases; Huntington's disease[PATH:ko05016-Map:ko05016];|Human Diseases; Neurodegenerative Diseases; Parkinson's disease[PATH:ko05012-Map:ko05012];|Metabolism; Energy Metabolism; Oxidative phosphorylation[PATH:ko00190-Map:ko00190]; | |%IPR001505:Copper centre Cu(A) :%IPR002429:Cytochrome c oxidase subunit II C-terminal | |GO:0004129:cytochrome-c oxidase activity|GO:0005507:copper ion binding | |GO:0016020:membrane | |GO:0006118:electron transport
CNUS0000107247.1 | Sense | 3 | 125_243_+_119_317_58.25|428_549_+_122_1397_252.62|551_670_+_120_500_89.12
CNUS0000107279.1 | Sense | 1 | 6_114_+_109_53_10.15
CNUS0000107281.1 | Sense | 1 | 62_177_+_116_169_31.52 |  |  |  |  |  |  |  |  | |%IPR000883:Cytochrome c oxidase, subunit I : | |GO:0005506:iron ion binding|GO:0020037:heme binding | |GO:0016021:integral to membrane | |GO:0006118:electron transport|GO:0009060:aerobic respiration
CNUS0000107288.1 | Sense | 1 | 6_119_+_114_522_97.83 |  |  |  |  |  |  |  |  | |%IPR000883:Cytochrome c oxidase, subunit I : | |GO:0005506:iron ion binding|GO:0020037:heme binding | |GO:0016021:integral to membrane | |GO:0006118:electron transport|GO:0009060:aerobic respiration
CNUS0000107320.1 | Sense | 2 | 184_304_+_121_182_31.28|306_425_+_120_200_36.5 |  |  | cre:CHLREDRAFT_190125 | 54 | 88.6 | 8e-17 | COX2B; cytochrome c oxidase subunit II, protein IIb of split subunit ; [NAME] cytochrome c oxidase subunit II [EC:1.9.3.1] | |Human [NAME]; Neurodegenerative Diseases; Alzheimer's disease[PATH:[NAME]:ko05010];|Human Diseases; Neurodegenerative Diseases; Huntington's disease[PATH:ko05016-Map:ko05016];|Human Diseases; Neurodegenerative Diseases; Parkinson's disease[PATH:ko05012-Map:ko05012];|Metabolism; Energy Metabolism; Oxidative phosphorylation[PATH:ko00190-Map:ko00190]; | |%IPR000883:Cytochrome c oxidase, subunit I :%IPR001505:Copper centre Cu(A) | |GO:0004129:cytochrome-c oxidase activity|GO:0005506:iron ion binding|GO:0005507:copper ion binding|GO:0020037:heme binding | |GO:0016020:membrane|GO:0016021:integral to membrane | |GO:0006118:electron transport|GO:0009060:aerobic respiration
CNUS0000107329.1 | Sense | 1 | 184_427_+_244_361246_34808.18
CNUS0000107429.1 | Sense | 1 | 306_417_+_112_91_17.77
[NAME] | Both | 2 | 2_111_+_110_154_27.57|549_659_+_111_71_12.81 | 2 | 1_121_-_121_77_12.35|549_670_-_122_560_90.68
CNUS0000107543.1 | Sense | 1 | 189_302_+_114_7_1.5
CNUS0000107586.1 | Sense | 2 | 182_299_+_118_298_54.38|306_426_+_121_171_31.57 |  |  | tva:TVAG_355490 | 18 | 73.6 | 6e-11 | viral A-type inclusion protein
CNUS0000107609.1 | AntiSense |  |  | 1 | 124_242_-_119_320_53.63
CNUS0000107630.1 | Sense | 1 | 672_792_+_121_343_55.7
CNUS0000107642.1 | Both | 3 | 255_365_+_111_350_62.87|550_669_+_120_6636_1120.95|917_1036_+_120_2714_446.28 | 2 | 550_731_-_182_3735_409.82|1294_1427_-_134_55_8.13 | api:100160763 | 23 | 146 | 3e-33 | similar to transposase domain-containing protein
CNUS0000107644.1 | Both | 1 | 674_792_+_119_1265_208.18 | 1 | 675_792_-_118_752_122.62
CNUS0000107702.1 | Sense | 1 | 251_365_+_115_41_7.22 |  |  |  |  |  |  |  |  | |%IPR001750:NADH/Ubiquinone/plastoquinone (complex I) : | |GO:0008137:NADH dehydrogenase (ubiquinone) activity |  | |GO:0042773:ATP synthesis coupled electron transport
CNUS0000107763.1 | Both | 1 | 184_304_+_121_2528_410.1 | 1 | 184_301_-_118_1877_304.97 | aag:AaeL_AAEL008504 | 32 | 120 | 2e-25 | hypothetical protein
CNUS0000107769.1 | Sense | 3 | 1_113_+_113_6344_1100.61|127_244_+_118_843_140.28|378_489_+_112_201_35.12
CNUS0000107799.1 | Both | 2 | 1099_1219_+_121_1108_177.18|1221_1340_+_120_2034_318.13 | 2 | 1099_1219_-_121_3570_585.41|1227_1340_-_114_1655_288.74 | dre:100148790 | 22 | 121 | 1e-25 | hypothetical protein LOC100148790 |  | |%IPR000477:RNA-directed DNA polymerase (reverse transcriptase) : | |GO:0003723:RNA binding|GO:0003964:RNA-directed DNA polymerase activity |  | |GO:0006278:RNA-dependent DNA replication
CNUS0000107811.1 | Sense | 1 | 1_102_+_102_1189_223.63 |  |  | dre:100147861 | 34 | 195 | 4e-48 | similar to pol polyprotein |  | |%IPR009007:Peptidase aspartic, catalytic : | |GO:0004190:aspartic-type endopeptidase activity |  | |GO:0006508:proteolysis
CNUS0000107814.1 | Both | 4 | 558_662_+_105_738_135.96|862_967_+_106_2832_526.68|1565_1707_+_143_469_64.96|2258_2376_+_119_3718_605.64 | 6 | 862_967_-_106_1104_201.48|1100_1215_-_116_1289_218.06|1406_1524_-_119_2986_491.94|2258_2375_-_118_12607_2023.16|2501_2618_-_118_1150_192.37|2818_2925_-_108_927_165.33 | tca:100142325 | 28 | 308 | 1e-81 | similar to pol polyprotein |  | |%IPR000169:Peptidase, cysteine peptidase active site :%IPR000477:RNA-directed DNA polymerase (reverse transcriptase) | |GO:0003676:nucleic acid binding|GO:0003723:RNA binding|GO:0003964:RNA-directed DNA polymerase activity|GO:0004190:aspartic-type endopeptidase activity|GO:0004197:cysteine-type endopeptidase activity|GO:0008270:zinc ion binding |  | |GO:0006278:RNA-dependent DNA replication|GO:0006508:proteolysis
CNUS0000107818.1 | Both | 4 | 62_172_+_111_6655_1185.19|245_365_+_121_8478_1393.23|428_547_+_120_4053_661.39|611_712_+_102_9263_1728.36 | 4 | 62_169_-_108_4498_823.16|245_365_-_121_8448_1372.95|397_607_-_211_14286_1337.64|611_712_-_102_15773_2845.01 | spu:752265 | 37 | 159 | 8e-38 | similar to endonuclease-reverse transcriptase |  | |%IPR000477:RNA-directed DNA polymerase (reverse transcriptase) :%[NAME]:RNA-directed DNA polymerase (reverse transcriptase), related | |GO:0003723:RNA binding|GO:0003964:RNA-directed DNA polymerase activity |  | |GO:0006278:RNA-dependent DNA replication
CNUS0000107830.1 | Sense | 2 | 1_113_+_113_6495_1127.04|127_244_+_118_843_140.28 |  |  | dre:100147861 | 35 | 793 | 0 | similar to pol polyprotein |  | |%IPR001584:Integrase, catalytic core :%IPR001878:Zinc finger, CCHC-type | |GO:0003676:nucleic acid binding|GO:0003677:DNA binding|GO:0008270:zinc ion binding |  | |GO:0015074:DNA integration
CNUS0000107836.1 | Both | 1 | 371_487_+_117_7156_1208.17 | 1 | 381_487_-_107_4472_794 | spu:765208 | 29 | 98.6 | 8e-19 | similar to putative reverse transcriptase |  | |%IPR001452:Src homology-3 :
CNUS0000107853.1 | AntiSense |  |  | 1 | 123_244_-_122_7428_1185.86 | spu:752265 | 35 | 108 | 2e-22 | similar to endonuclease-reverse transcriptase |  | |%IPR000477:RNA-directed DNA polymerase (reverse transcriptase) :%[NAME]:RNA-directed DNA polymerase (reverse transcriptase), related | |GO:0003723:RNA binding|GO:0003964:RNA-directed DNA polymerase activity |  | |GO:0006278:RNA-dependent DNA replication
CNUS0000107854.1 | Both | 2 | 489_604_+_116_23989_4073.09|1099_1206_+_108_1742_308.5 | 1 | 489_600_-_112_4879_858.27 | dre:100150671 | 36 | 310 | 3e-82 | similar to F15D4.7 |  | |%IPR001878:Zinc finger, CCHC-type :%IPR008042:[NAME], Pao | |GO:0003676:nucleic acid binding|GO:0008270:zinc ion binding
CNUS0000107862.1 | AntiSense |  |  | 1 | 428_539_-_112_932_169.27 | spu:765395 | 53 | 139 | 2e-31 | similar to OSJNBa0039K24.13
CNUS0000107864.1 | Sense | 1 | 1_113_+_113_1244_217 |  |  | dre:100147861 | 32 | 492 | 1e-137 | similar to pol polyprotein |  | |%IPR008042:[NAME], Pao :
[NAME] | Both | 3 | 1_113_+_113_7202_1250.57|127_230_+_104_12377_2301.94|646_773_+_128_142_22.39 | 1 | 123_227_-_105_2064_383.52 | dre:100148076 | 23 | 136 | 4e-30 | similar to pol polyprotein |  | |%IPR008042:[NAME], Pao :%IPR009007:Peptidase aspartic, catalytic | |GO:0004190:aspartic-type endopeptidase activity |  | |GO:0006508:proteolysis
CNUS0000107873.1 | Sense | 1 | 65_182_+_118_282_50.62 |  |  | dre:100147861 | 32 | 621 | 1e-175 | similar to pol polyprotein |  | |%IPR001878:Zinc finger, CCHC-type :%IPR008042:[NAME], Pao | |GO:0003676:nucleic acid binding|GO:0008270:zinc ion binding
CNUS0000107895.1 | Both | 2 | 210_512_+_303_47303_3084.36|738_872_+_135_1859_275.31 | 2 | 368_487_-_120_4942_807.51|741_873_-_133_3029_451.02 | dre:100147861 | 37 | 425 | 1e-117 | similar to pol polyprotein |  | |%IPR001878:Zinc finger, CCHC-type :%IPR008042:[NAME], Pao | |GO:0003676:nucleic acid binding|GO:0008270:zinc ion binding
CNUS0000107896.1 | Both | 3 | 191_304_+_114_7848_1364.85|367_476_+_110_12685_2280.3|1161_1280_+_120_3112_504.5 | 1 | 1162_1266_-_105_8310_1544.71 | dre:100148209 | 30 | 355 | 5e-96 | similar to pol polyprotein |  | |%IPR001878:Zinc finger, CCHC-type :%IPR009007:Peptidase aspartic, catalytic | |GO:0003676:nucleic acid binding|GO:0004190:aspartic-type endopeptidase activity|GO:0008270:zinc ion binding |  | |GO:0006508:proteolysis
CNUS0000107901.1 | Sense | 4 | 1_113_+_113_6495_1127.04|127_244_+_118_843_140.28|615_731_+_117_110_19.71|859_974_+_116_46_8.31 |  |  | dre:100147861 | 35 | 749 | 0 | similar to pol polyprotein |  | |%IPR001878:Zinc finger, CCHC-type :%IPR008042:[NAME], Pao | |GO:0003676:nucleic acid binding|GO:0008270:zinc ion binding
CNUS0000107905.1 | Sense | 1 | 74_177_+_104_461_85.7 |  |  | dre:100147861 | 26 | 163 | 3e-38 | similar to pol polyprotein |  | |%IPR009007:Peptidase aspartic, catalytic : | |GO:0004190:aspartic-type endopeptidase activity |  | |GO:0006508:proteolysis
CNUS0000107907.1 | Both | 1 | 428_548_+_121_2519_399.3 | 1 | 428_548_-_121_5754_946.47 | dre:100148674 | 47 | 196 | 2e-48 | similar to pol polyprotein |  | |%IPR000477:RNA-directed DNA polymerase (reverse transcriptase) : | |GO:0003723:RNA binding|GO:0003964:RNA-directed DNA polymerase activity |  | |GO:0006278:RNA-dependent DNA replication
CNUS0000107908.1 | Sense | 2 | 247_350_+_104_256_48.09|489_608_+_120_2353_384.14 |  |  | spu:581171 | 41 | 638 | 0 | similar to OSJNBa0059D20.6 |  | |%IPR000477:RNA-directed DNA polymerase (reverse transcriptase) :%IPR001584:Integrase, catalytic core | |GO:0003676:nucleic acid binding|GO:0003677:DNA binding|GO:0003723:RNA binding|GO:0003964:RNA-directed DNA polymerase activity|GO:0004190:aspartic-type endopeptidase activity |  | |GO:0006278:RNA-dependent DNA replication|GO:0006508:proteolysis|GO:0015074:DNA integration
CNUS0000107915.1 | Sense | 1 | 2137_2240_+_104_20_4.26 |  |  | mac:MA2525 | 24 | 101 | 2e-19 | WD-40 repeat-containing protein |  | |%IPR011044:Quinoprotein amine dehydrogenase, beta chain-like :
CNUS0000107918.1 | Both | 1 | 498_671_+_174_3903_442.07 | 1 | 521_671_-_151_2741_361.72 | dre:100147861 | 31 | 259 | 3e-67 | similar to pol polyprotein |  | |%IPR001878:Zinc finger, CCHC-type :%IPR009007:Peptidase aspartic, catalytic | |GO:0003676:nucleic acid binding|GO:0004190:aspartic-type endopeptidase activity|GO:0008270:zinc ion binding |  | |GO:0006508:proteolysis
CNUS0000107923.1 | Both | 1 | 1709_1918_+_210_8554_803.76 | 1 | 1770_1920_-_151_5994_778.53 | spu:752265 | 40 | 167 | 2e-39 | similar to endonuclease-reverse transcriptase |  | |%IPR000477:RNA-directed DNA polymerase (reverse transcriptase) :%[NAME]:RNA-directed DNA polymerase (reverse transcriptase), related | |GO:0003723:RNA binding|GO:0003964:RNA-directed DNA polymerase activity |  | |GO:0006278:RNA-dependent DNA replication
CNUS0000107926.1 | Both | 6 | 1_119_+_119_8026_1317.2|127_304_+_178_10725_1163.22|306_487_+_182_22870_2412.07|489_592_+_104_1165_223.87|1037_1341_+_305_29830_1904.3|1343_1463_+_121_17963_2864.56 | 7 | 1_121_-_121_1837_305.57|123_304_-_182_8650_905.2|367_590_-_224_10035_871.65|1037_1341_-_305_14934_957|1343_1463_-_121_14668_2443.21|1526_1646_-_121_8451_1379.7|1710_1829_-_120_10642_1742.61 | dre:100151393 | 38 | 116 | 7e-24 | similar to pol polyprotein |  | |%IPR008042:[NAME], Pao :
[NAME] | Sense | 1 | 2086_2193_+_108_240_41.92 |  |  | spu:575456 | 42 | 498 | 1e-139 | similar to OSJNBa0011F23.1 |  | |%IPR000477:RNA-directed DNA polymerase (reverse transcriptase) :%IPR001584:Integrase, catalytic core | |GO:0003676:nucleic acid binding|GO:0003677:DNA binding|GO:0003723:RNA binding|GO:0003964:RNA-directed DNA polymerase activity |  | |GO:0006278:RNA-dependent DNA replication|GO:0015074:DNA integration
CNUS0000107954.1 | Both | 4 | 184_305_+_122_5026_822.63|308_427_+_120_3355_550.37|1099_1220_+_122_1670_266.46|1832_2012_+_181_288_30.9 | 5 | 186_304_-_119_2832_464.47|306_487_-_182_941_100.89|611_727_-_117_2853_477.24|794_912_-_119_314_52.16|1099_1280_-_182_1369_146.07 | [NAME] | 38 | 352 | 8e-95 | similar to pol polyprotein |  | |%IPR001024:Lipoxygenase, LH2 :%IPR004012:RUN
CNUS0000107955.1 | Both | 1 | 1957_2060_+_104_394_73.36 | 1 | 307_425_-_119_1703_289.78 | spu:581171 | 37 | 511 | 1e-143 | similar to OSJNBa0059D20.6 |  | |%IPR000477:RNA-directed DNA polymerase (reverse transcriptase) :%IPR001584:Integrase, catalytic core | |GO:0003676:nucleic acid binding|GO:0003677:DNA binding|GO:0003723:RNA binding|GO:0003964:RNA-directed DNA polymerase activity|GO:0004190:aspartic-type endopeptidase activity |  | |GO:0006278:RNA-dependent DNA replication|GO:0006508:proteolysis|GO:0015074:DNA integration
CNUS0000107958.1 | Both | 1 | 2_111_+_110_154_27.57 | 1 | 1_115_-_115_76_12.82
CNUS0000107964.1 | Sense | 1 | 1_121_+_121_791_128.15 |  |  | dre:100147861 | 31 | 404 | 1e-111 | similar to pol polyprotein |  | |%IPR009007:Peptidase aspartic, catalytic : | |GO:0004190:aspartic-type endopeptidase activity |  | |GO:0006508:proteolysis
CNUS0000107967.1 | Both | 1 | 1162_1280_+_119_3171_518.63 | 1 | 1162_1266_-_105_9468_1763.11 | dre:100147861 | 25 | 181 | 9e-44 | similar to pol polyprotein |  | |%IPR001878:Zinc finger, CCHC-type :%IPR009007:Peptidase aspartic, catalytic | |GO:0003676:nucleic acid binding|GO:0004190:aspartic-type endopeptidase activity|GO:0008270:zinc ion binding |  | |GO:0006508:proteolysis
CNUS0000107975.1 | Sense | 3 | 1_113_+_113_6495_1127.04|140_244_+_105_830_155.08|378_489_+_112_201_35.12 |  |  | dre:100147861 | 33 | 97.8 | 1e-18 | similar to pol polyprotein
CNUS0000107977.1 | Both | 3 | 367_487_+_121_23626_3794.97|520_727_+_208_4520_430.45|794_972_+_179_3693_414.58 | 2 | 367_485_-_119_2308_380.41|520_671_-_152_2743_359.58 | dre:100147861 | 34 | 380 | 1e-103 | similar to pol polyprotein |  | |%IPR008042:[NAME], Pao :%IPR009007:Peptidase aspartic, catalytic | |GO:0004190:aspartic-type endopeptidase activity |  | |GO:0006508:proteolysis
CNUS0000107980.1 | Sense | 2 | 611_731_+_121_23552_3785.74|739_853_+_115_3223_553.69 |  |  | dre:100150671 | 46 | 227 | 1e-57 | similar to F15D4.7 |  | |%IPR008042:[NAME], Pao :%IPR009007:Peptidase aspartic, catalytic | |GO:0004190:aspartic-type endopeptidase activity |  | |GO:0006508:proteolysis
CNUS0000107983.1 | Sense | 2 | 1_121_+_121_2805_458.83|1281_1395_+_115_5015_827.73 |  |  | dre:797961 | 27 | 189 | 5e-46 | similar to polycystic kidney disease 1-like 2 short form |  | |%IPR009007:Peptidase aspartic, catalytic : | |GO:0004190:aspartic-type endopeptidase activity |  | |GO:0006508:proteolysis
CNUS0000107990.1 | Both | 1 | 2_111_+_110_154_27.57 | 1 | 1_121_-_121_77_12.35
CNUS0000107995.1 | Both | 2 | 249_366_+_118_1266_212.46|1161_1342_+_182_1870_199.42 | 4 | 248_487_-_240_4889_397.52|550_670_-_121_10351_1672.74|733_853_-_121_5325_854.79|1099_1401_-_303_8969_572.33 | spu:581171 | 34 | 229 | 3e-58 | similar to OSJNBa0059D20.6 |  | |%IPR000477:RNA-directed DNA polymerase (reverse transcriptase) : | |GO:0003723:RNA binding|GO:0003964:RNA-directed DNA polymerase activity |  | |GO:0006278:RNA-dependent DNA replication
CNUS0000108004.1 | Sense | 4 | 1_113_+_113_6120_1061.41|127_244_+_118_843_140.28|378_489_+_112_201_35.12|615_731_+_117_110_19.71
CNUS0000108009.1 | Sense | 1 | 611_723_+_113_722_125.48 |  |  | dre:100148209 | 26 | 98.6 | 5e-19 | similar to pol polyprotein
CNUS0000108031.1 | Sense | 1 | 977_1083_+_107_403_72.58 |  |  | dre:100004926 | 35 | 283 | 2e-74 | similar to pol polyprotein |  | |%IPR000477:RNA-directed DNA polymerase (reverse transcriptase) :%IPR001584:Integrase, catalytic core | |GO:0003676:nucleic acid binding|GO:0003677:DNA binding|GO:0003723:RNA binding|GO:0003964:RNA-directed DNA polymerase activity |  | |GO:0006278:RNA-dependent DNA replication|GO:0015074:DNA integration
CNUS0000108038.1 | Sense | 1 | 2684_2801_+_118_4565_730.17 |  |  | dre:100147861 | 31 | 444 | 1e-122 | similar to pol polyprotein |  | |%IPR008042:[NAME], Pao :%IPR009007:Peptidase aspartic, catalytic | |GO:0004190:aspartic-type endopeptidase activity |  | |GO:0006508:proteolysis
CNUS0000108040.1 | Sense | 1 | 735_847_+_113_1426_241.45 |  |  | spu:575456 | 47 | 507 | 1e-141 | similar to OSJNBa0011F23.1 |  | |%IPR000477:RNA-directed DNA polymerase (reverse transcriptase) :%IPR001969:Peptidase aspartic, active site | |GO:0003723:RNA binding|GO:0003964:RNA-directed DNA polymerase activity|GO:0004190:aspartic-type endopeptidase activity |  | |GO:0006278:RNA-dependent DNA replication|GO:0006508:proteolysis
CNUS0000108042.1 | Both | 1 | 367_471_+_105_1387_261.51 | 1 | 199_303_-_105_258_47.27
CNUS0000108050.1 | Sense | 1 | 985_1084_+_100_258_51.61 |  |  | dre:100150350 | 55 | 107 | 1e-21 | similar to polyprotein |  | |%IPR001584:Integrase, catalytic core :%IPR012337:Polynucleotidyl transferase, [NAME] fold | |GO:0003676:nucleic acid binding|GO:0003677:DNA binding |  | |GO:0015074:DNA integration