Spreadsheet: 52e9853b-6c55-4ba2-8d3d-5e962a5a877f
Sheet: Sorted & Annotated Structural V

Side 1 Ref Accno | Side 1 Ref Pos | Var Direction |  | Side 2 Ref Accno | Side 2 Ref Pos | Side 2 Var Dir |  | Higher Side Var Depth | Higher side Var % | Deviation Length | Var Type | Strain | Nature of Variant | Affected gene(s) | 5'Chimeric Read BLAST results | 3' Chimeric Read BLAST results
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  | (=5' unmapped portion of the reads at the 3' end of the junction) | (=3' unmapped portion of the read at the 5' end of the junction)
>gi|16082679|ref|NC_003132.1 | 9612 | --> |  | ? | ? | ? |  | 15 | 100 | - | Point | AS200901156 | pPCP1 terminus
>gi|16082679|ref|NC_003132.1 | 9612 | --> |  | ? | ? | ? |  | 11 | 90.91 | - | Point | AS200901434
>gi|16082679|ref|NC_003132.1 | 9612 | --> |  | ? | ? | ? |  | 21 | 100 | - | Point | AS200901509
>gi|16082679|ref|NC_003132.1 | 9612 | --> |  | ? | ? | ? |  | 21 | 100 | - | Point | AS200901539
>gi|16082679|ref|NC_003132.1 | 9612 | --> |  | ? | ? | ? |  | 11 | 90.91 | - | Point | BA200901703
>gi|16082679|ref|NC_003132.1 | 9612 | --> |  | ? | ? | ? |  | 41 | 100 | - | Point | BA020091799
>gi|16082679|ref|NC_003132.1 | 9612 | --> |  | ? | ? | ? |  | 17 | 88.24 | - | Point | BA200901990
>gi|16082679|ref|NC_003132.1 | 9612 | --> |  | ? | ? | ? |  | 7 | 100 | - | Point | BA200902009
>gi|16082679|ref|NC_003132.1 | 9612 | --> |  | ? | ? | ? |  | 19 | 89.47 | - | Point | AS200902147
>gi|16082679|ref|NC_003132.1 | 9612 | --> |  | ? | ? | ? |  | 81 | 97.53 | - | Point | CO92
>gi|16082691|ref|NC_003131.1 | 14991 | <-- |  | ? | ? | ? |  | 38 | 100 | - | Point | AS200901539 | New IS285 Insertion – chimeric reads | YPCD1.23/Orf60 pCD1 hypothetical protein | IS285
>gi|16082691|ref|NC_003131.1 | 14999 | --> |  | ? | ? | ? |  | 41 | 95.12 | - | Point | AS200901539
>gi|16082691|ref|NC_003131.1 | 70305 | --> |  | ? | ? | ? |  | 64 | 95.31 | - | Point | AS200901156 | pCD1 terminus
>gi|16082691|ref|NC_003131.1 | 70305 | --> |  | ? | ? | ? |  | 23 | 91.3 | - | Point | AS200901434
>gi|16082691|ref|NC_003131.1 | 70305 | --> |  | ? | ? | ? |  | 54 | 100 | - | Point | AS200901509
>gi|16082691|ref|NC_003131.1 | 70305 | --> |  | ? | ? | ? |  | 36 | 94.44 | - | Point | AS200901539
>gi|16082691|ref|NC_003131.1 | 70305 | --> |  | ? | ? | ? |  | 24 | 95.83 | - | Point | BA200901703
>gi|16082691|ref|NC_003131.1 | 70305 | --> |  | ? | ? | ? |  | 64 | 96.88 | - | Point | BA020091799
>gi|16082691|ref|NC_003131.1 | 70305 | --> |  | ? | ? | ? |  | 31 | 96.77 | - | Point | BA200902009
>gi|16082691|ref|NC_003131.1 | 70305 | --> |  | ? | ? | ? |  | 26 | 96.15 | - | Point | AS200902147
>gi|16082691|ref|NC_003131.1 | 70305 | --> |  | ? | ? | ? |  | 80 | 100 | - | Point | CO92
>gi|16082781|ref|NC_003134.1 | 72877 | --> |  | ? | ? | ? |  | 9 | 88.89 | - | Point | AS200902147 | New IS1541 Insertion |  | IS1541 | IS1541
>gi|16082781|ref|NC_003134.1 | 72878 | <-- |  | ? | ? | ? |  | 12 | 91.67 | - | Point | AS200901434
>gi|16082781|ref|NC_003134.1 | 72878 | <-- |  | ? | ? | ? |  | 13 | 100 | - | Point | AS200901509
>gi|16082781|ref|NC_003134.1 | 72878 | <-- |  | ? | ? | ? |  | 14 | 92.86 | - | Point | AS200902147
>gi|16082781|ref|NC_003134.1 | 72880 | --> |  | ? | ? | ? |  | 8 | 87.5 | - | Point | AS200901434
>gi|16082781|ref|NC_003134.1 | 72880 | --> |  | ? | ? | ? |  | 11 | 100 | - | Point | AS200901509
>gi|16082781|ref|NC_003134.1 | 96210 | --> |  | ? | ? | ? |  | 25 | 96 | - | Point | AS200901156 | pMT1 terminus
>gi|16082781|ref|NC_003134.1 | 96210 | --> |  | ? | ? | ? |  | 14 | 85.71 | - | Point | AS200901434
>gi|16082781|ref|NC_003134.1 | 96210 | --> |  | ? | ? | ? |  | 21 | 100 | - | Point | AS200901509
>gi|16082781|ref|NC_003134.1 | 96210 | --> |  | ? | ? | ? |  | 20 | 100 | - | Point | AS200901539
>gi|16082781|ref|NC_003134.1 | 96210 | --> |  | ori | ? | ? |  | 17 | 100 | - | Point | BA200901703
>gi|16082781|ref|NC_003134.1 | 96210 | --> |  | ? | ? | ? |  | 28 | 96.43 | - | Point | BA020091799
>gi|16082781|ref|NC_003134.1 | 96210 | --> |  | ? | ? | ? |  | 22 | 100 | - | Point | BA200901990
>gi|16082781|ref|NC_003134.1 | 96210 | --> |  | ? | ? | ? |  | 17 | 94.12 | - | Point | BA200902009
>gi|16082781|ref|NC_003134.1 | 96210 | --> |  | ? | ? | ? |  | 8 | 100 | - | Point | AS200902147
>gi|16082781|ref|NC_003134.1 | 96210 | --> |  | ? | ? | ? |  | 37 | 100 | - | Point | CO92
>gi|16120353|ref|NC_003143.1 | 1 | <-- |  | gi|16120353|ref|NC_003143.1 | 4653728 | --> |  | 10 | 100 | 4653726 | Point | AS200901156 | Chromosome terminus
>gi|16120353|ref|NC_003143.1 | 1 | <-- |  | ? | ? | ? |  | 7 | 85.71 | - | Point | AS200901434
>gi|16120353|ref|NC_003143.1 | 1 | <-- |  | gi|16120353|ref|NC_003143.1 | 4653728 | --> |  | 11 | 100 | 4653726 | Point | AS200901509
>gi|16120353|ref|NC_003143.1 | 1 | <-- |  | gi|16120353|ref|NC_003143.1 | 4653728 | --> |  | 6 | 100 | 4653726 | Point | AS200901539
>gi|16120353|ref|NC_003143.1 | 1 | <-- |  | gi|16120353|ref|NC_003143.1 | 4653728 | --> |  | 6 | 100 | 4653726 | Point | BA200901703
>gi|16120353|ref|NC_003143.1 | 1 | <-- |  | gi|16120353|ref|NC_003143.1 | 4653728 | --> |  | 21 | 100 | 4653726 | Point | BA020091799
>gi|16120353|ref|NC_003143.1 | 1 | <-- |  | gi|16120353|ref|NC_003143.1 | 4653728 | --> |  | 24 | 95.83 | 4653726 | Point | BA200901990
>gi|16120353|ref|NC_003143.1 | 1 | <-- |  | gi|16120353|ref|NC_003143.1 | 4653728 | --> |  | 16 | 100 | 4653726 | Point | BA200902009
>gi|16120353|ref|NC_003143.1 | 1 | <-- |  | gi|16120353|ref|NC_003143.1 | 4653728 | --> |  | 10 | 100 | 4653726 | Point | AS200902147
>gi|16120353|ref|NC_003143.1 | 1 | <-- |  | gi|16120353|ref|NC_003143.1 | 4653728 | --> |  | 31 | 96.77 | 4653726 | Point | CO92
>gi|16120353|ref|NC_003143.1 | 184993 | <-- |  | ? | ? | ? |  | 23 | 86.96 | - | Point | AS200901156 | IS100 | YPO0166 | IS100 | IS100
>gi|16120353|ref|NC_003143.1 | 184993 | <-- |  | ? | ? | ? |  | 21 | 71.43 | - | Point | AS200901509
>gi|16120353|ref|NC_003143.1 | 184993 | <-- |  | ? | ? | ? |  | 17 | 88.24 | - | Point | AS200901539
>gi|16120353|ref|NC_003143.1 | 184993 | <-- |  | ? | ? | ? |  | 8 | 75 | - | Point | BA200901703
>gi|16120353|ref|NC_003143.1 | 184993 | <-- |  | ? | ? | ? |  | 19 | 89.47 | - | Point | BA200901990
>gi|16120353|ref|NC_003143.1 | 184993 | <-- |  | ? | ? | ? |  | 13 | 69.23 | - | Point | BA200902009
>gi|16120353|ref|NC_003143.1 | 184993 | <-- |  | ? | ? | ? |  | 14 | 85.71 | - | Point | AS200902147
>gi|16120353|ref|NC_003143.1 | 185001 | --> |  | ? | ? | ? |  | 14 | 85.71 | - | Point | AS200901156 |  | YPO0166
>gi|16120353|ref|NC_003143.1 | 185001 | --> |  | ? | ? | ? |  | 8 | 37.5 | - | Point | AS200901434
>gi|16120353|ref|NC_003143.1 | 185001 | --> |  | ? | ? | ? |  | 16 | 56.25 | - | Point | AS200901509
>gi|16120353|ref|NC_003143.1 | 185001 | --> |  | ? | ? | ? |  | 18 | 94.44 | - | Point | BA200901990
>gi|16120353|ref|NC_003143.1 | 185001 | --> |  | ? | ? | ? |  | 10 | 80 | - | Point | BA200902009
>gi|16120353|ref|NC_003143.1 | 185001 | --> |  | ? | ? | ? |  | 15 | 86.67 | - | Point | AS200902147
>gi|16120353|ref|NC_003143.1 | 190049 | --> |  | gi|16120353|ref|NC_003143.1 | 192009 | <-- |  | 11 | 100 | 1959 | Point | AS200901156 | Lacking IS100 element |  | 189930-190044 | 192010-192299
>gi|16120353|ref|NC_003143.1 | 190049 | --> |  | gi|16120353|ref|NC_003143.1 | 192009 | <-- |  | 12 | 100 | 1959 | Point | AS200901509 | Lacking IS100 element
>gi|16120353|ref|NC_003143.1 | 190049 | --> |  | gi|16120353|ref|NC_003143.1 | 192009 | <-- |  | 12 | 91.67 | 1959 | Point | AS200901539 | Lacking IS100 element
>gi|16120353|ref|NC_003143.1 | 190049 | --> |  | gi|16120353|ref|NC_003143.1 | 192009 | <-- |  | 3 | 100 | 1959 | Point | BA200901703 | Lacking IS100 element
>gi|16120353|ref|NC_003143.1 | 190049 | --> |  | gi|16120353|ref|NC_003143.1 | 192009 | <-- |  | 22 | 100 | 1959 | Point | BA020091799 | Lacking IS100 element
>gi|16120353|ref|NC_003143.1 | 190049 | --> |  | gi|16120353|ref|NC_003143.1 | 192009 | <-- |  | 20 | 95 | 1959 | Point | BA200901990 | Lacking IS100 element
>gi|16120353|ref|NC_003143.1 | 190049 | --> |  | gi|16120353|ref|NC_003143.1 | 192009 | <-- |  | 4 | 100 | 1959 | Point | BA200902009 | Lacking IS100 element
>gi|16120353|ref|NC_003143.1 | 190049 | --> |  | gi|16120353|ref|NC_003143.1 | 192009 | <-- |  | 6 | 83.33 | 1959 | Point | AS200902147 | Lacking IS100 element
>gi|16120353|ref|NC_003143.1 | 190081 | --> |  | ? | ? | ? |  | 3 | 100 | - | Point | AS200901434 | Lacking IS100 element
>gi|16120353|ref|NC_003143.1 | 300409 | --> |  | ? | ? | ? |  | 3 | 100 | - | Point | AS200901434 | Lacks IS1541 element |  | 300097-300380 | 301122-301514
>gi|16120353|ref|NC_003143.1 | 300410 | --> |  | gi|16120353|ref|NC_003143.1 | 301122 | <-- |  | 20 | 100 | 711 | Point | AS200901156 | Lacks IS1541 element
>gi|16120353|ref|NC_003143.1 | 300410 | --> |  | gi|16120353|ref|NC_003143.1 | 301122 | <-- |  | 12 | 100 | 711 | Point | AS200901509 | Lacks IS1541 element
>gi|16120353|ref|NC_003143.1 | 300410 | --> |  | gi|16120353|ref|NC_003143.1 | 301122 | <-- |  | 16 | 93.75 | 711 | Point | AS200901539 | Lacks IS1541 element
>gi|16120353|ref|NC_003143.1 | 300410 | --> |  | gi|16120353|ref|NC_003143.1 | 301122 | <-- |  | 8 | 100 | 711 | Point | BA200901703 | Lacks IS1541 element
>gi|16120353|ref|NC_003143.1 | 300410 | --> |  | gi|16120353|ref|NC_003143.1 | 301122 | <-- |  | 14 | 100 | 711 | Point | BA020091799 | Lacks IS1541 element
>gi|16120353|ref|NC_003143.1 | 300410 | --> |  | gi|16120353|ref|NC_003143.1 | 301122 | <-- |  | 26 | 100 | 711 | Point | BA200901990 | Lacks IS1541 element
>gi|16120353|ref|NC_003143.1 | 300410 | --> |  | gi|16120353|ref|NC_003143.1 | 301122 | <-- |  | 10 | 100 | 711 | Point | BA200902009 | Lacks IS1541 element
>gi|16120353|ref|NC_003143.1 | 300410 | --> |  | gi|16120353|ref|NC_003143.1 | 301122 | <-- |  | 9 | 100 | 711 | Point | AS200902147 | Lacks IS1541 element
>gi|16120353|ref|NC_003143.1 | 301105 | <-- |  | ? | ? | ? |  | 8 | 50 | - | Point | AS200901434 |  | 3' termins IS1541
>gi|16120353|ref|NC_003143.1 | 1133115 | <-- |  | ? | ? | ? |  | 32 | 50 | - | Point | BA200901990 | New IS1541 Insertion |  | IS1541 | IS1541
>gi|16120353|ref|NC_003143.1 | 1133119 | <-- |  | ? | ? | ? |  | 7 | 71.43 | - | Point | BA200902009
>gi|16120353|ref|NC_003143.1 | 1133120 | --> |  | ? | ? | ? |  | 20 | 50 | - | Point | BA200901990
>gi|16120353|ref|NC_003143.1 | 1133120 | --> |  | ? | ? | ? |  | 13 | 84.62 | - | Point | BA200902009
>gi|16120353|ref|NC_003143.1 | 1273047 | --> |  | gi|16120353|ref|NC_003143.1 | 1273151 | <-- |  | 6 | 50 | 103 | Point | AS200901509
>gi|16120353|ref|NC_003143.1 | 1442414 | <-- |  | ? | ? | ? |  | 26 | 76.92 | - | Point | BA200901990 | New IS100 Insertion | Intergenic (uxuA/YPO1284) | IS100 | IS100
>gi|16120353|ref|NC_003143.1 | 1442414 | <-- |  | ? | ? | ? |  | 7 | 71.43 | - | Point | BA200902009
>gi|16120353|ref|NC_003143.1 | 1442420 | --> |  | ? | ? | ? |  | 21 | 85.71 | - | Point | BA200901990
>gi|16120353|ref|NC_003143.1 | 1442420 | --> |  | ? | ? | ? |  | 10 | 70 | - | Point | BA200902009
>gi|16120353|ref|NC_003143.1 | 1534254 | --> |  | ? | ? | ? |  | 19 | 94.74 | - | Point | BA200901990 | New IS1541 Insertion |  | IS1541 | IS1541
>gi|16120353|ref|NC_003143.1 | 1534254 | --> |  | ? | ? | ? |  | 14 | 100 | - | Point | BA200902009
>gi|16120353|ref|NC_003143.1 | 1534255 | <-- |  | ? | ? | ? |  | 11 | 90.91 | - | Point | BA200901990
>gi|16120353|ref|NC_003143.1 | 1534255 | <-- |  | ? | ? | ? |  | 5 | 100 | - | Point | BA200902009
>gi|16120353|ref|NC_003143.1 | 1992559 | --> |  | gi|16120353|ref|NC_003143.1 | 1994519 | <-- |  | 14 | 100 | 1959 | Point | AS200901156 | Lacks IS100 element |  | 1992343-1992552 | 1994512-1994644
>gi|16120353|ref|NC_003143.1 | 1992559 | --> |  | ? | ? | ? |  | 5 | 80 | - | Point | AS200901434 | Lacks IS100 element
>gi|16120353|ref|NC_003143.1 | 1992559 | --> |  | gi|16120353|ref|NC_003143.1 | 1994519 | <-- |  | 10 | 100 | 1959 | Point | AS200901509 | Lacks IS100 element
>gi|16120353|ref|NC_003143.1 | 1992559 | --> |  | gi|16120353|ref|NC_003143.1 | 1994519 | <-- |  | 15 | 100 | 1959 | Point | BA200901703 | Lacks IS100 element
>gi|16120353|ref|NC_003143.1 | 1992559 | --> |  | gi|16120353|ref|NC_003143.1 | 1994519 | <-- |  | 27 | 96.3 | 1959 | Point | BA020091799 | Lacks IS100 element
>gi|16120353|ref|NC_003143.1 | 1992559 | --> |  | gi|16120353|ref|NC_003143.1 | 1994519 | <-- |  | 21 | 100 | 1959 | Point | BA200901990 | Lacks IS100 element
>gi|16120353|ref|NC_003143.1 | 1992559 | --> |  | gi|16120353|ref|NC_003143.1 | 1994519 | <-- |  | 11 | 100 | 1959 | Point | BA200902009 | Lacks IS100 element
>gi|16120353|ref|NC_003143.1 | 1994512 | <-- |  | ? | ? | ? |  | 8 | 87.5 | - | Point | AS200901434 | Lacks IS100 element
>gi|16120353|ref|NC_003143.1 | 2117881 | <-- |  | ? | ? | ? |  | 10 | 30 | - | Point | BA200902009 |  | [NAME]
>gi|16120353|ref|NC_003143.1 | 2190946 | --> |  | ? | ? | ? |  | 22 | 77.27 | - | Point | BA020091799 | New IS100 Insertion | YPO1934 | no hit | IS100
>gi|16120353|ref|NC_003143.1 | 2190948 | <-- |  | ? | ? | ? |  | 30 | 86.67 | - | Point | BA020091799
>gi|16120353|ref|NC_003143.1 | 2372654 | --> |  | ? | ? | ? |  | 6 | 83.33 | - | Point | BA200901703 |  | Putative defective lambdoid prophage
>gi|16120353|ref|NC_003143.1 | 2372658 | <-- |  | ? | ? | ? |  | 23 | 56.52 | - | Point | AS200901156 |  |  | IS1541 | IS1541
>gi|16120353|ref|NC_003143.1 | 2372661 | <-- |  | ? | ? | ? |  | 12 | 91.67 | - | Point | BA200901703
>gi|16120353|ref|NC_003143.1 | 2372663 | --> |  | ? | ? | ? |  | 20 | 30 | - | Point | AS200901156
>gi|16120353|ref|NC_003143.1 | 2546052 | <-- |  | ? | ? | ? |  | 8 | 100 | - | Point | AS200901539 | New IS100 Insertion | fumC fumarate hydratase | IS100 | IS100
>gi|16120353|ref|NC_003143.1 | 2546055 | --> |  | ? | ? | ? |  | 10 | 100 | - | Point | AS200901539
>gi|16120353|ref|NC_003143.1 | 2554170 | <-- |  | gi|16120353|ref|NC_003143.1 | 2562911 | --> |  | 58 | 50 | 8740 | Point | CO92
>gi|16120353|ref|NC_003143.1 | 2555118 | <-- |  | gi|16120353|ref|NC_003143.1 | 2560549 | --> |  | 37 | 37.84 | 5430 | Point | AS200901156 | Prophage
>gi|16120353|ref|NC_003143.1 | 2555118 | <-- |  | ? | ? | ? |  | 25 | 32 | - | Point | AS200901434
>gi|16120353|ref|NC_003143.1 | 2555118 | <-- |  | gi|16120353|ref|NC_003143.1 | 2560549 | --> |  | 15 | 53.33 | 5430 | Point | AS200901509
>gi|16120353|ref|NC_003143.1 | 2555118 | <-- |  | gi|16120353|ref|NC_003143.1 | 2562854 | --> |  | 19 | 47.37 | 7735 | Point | AS200901539
>gi|16120353|ref|NC_003143.1 | 2555118 | <-- |  | gi|16120353|ref|NC_003143.1 | 2560549 | --> |  | 19 | 36.84 | 5430 | Point | BA200901703
>gi|16120353|ref|NC_003143.1 | 2555118 | <-- |  | gi|16120353|ref|NC_003143.1 | 2560549 | --> |  | 44 | 38.64 | 5430 | Point | BA020091799
>gi|16120353|ref|NC_003143.1 | 2555118 | <-- |  | gi|16120353|ref|NC_003143.1 | 2560549 | --> |  | 46 | 47.83 | 5430 | Point | BA200901990
>gi|16120353|ref|NC_003143.1 | 2555118 | <-- |  | gi|16120353|ref|NC_003143.1 | 2560549 | --> |  | 28 | 39.29 | 5430 | Point | BA200902009
>gi|16120353|ref|NC_003143.1 | 2555118 | <-- |  | gi|16120353|ref|NC_003143.1 | 2560549 | --> |  | 17 | 52.94 | 5430 | Point | AS200902147
>gi|16120353|ref|NC_003143.1 | 2560551 | --> |  | ? | ? | ? |  | 25 | 36 | - | Point | AS200901434 |  | Prophage
>gi|16120353|ref|NC_003143.1 | 2726564 | <-- |  | ? | ? | ? |  | 20 | 95 | - | Point | BA020091799 | New IS100 Insertion | btuC/vitamin B12 transporter permease ypo2425 | IS100 | IS100
>gi|16120353|ref|NC_003143.1 | 2726565 | --> |  | ? | ? | ? |  | 19 | 94.74 | - | Point | BA020091799
>gi|16120353|ref|NC_003143.1 | 2769381 | --> |  | gi|16120353|ref|NC_003143.1 | 2769622 | <-- |  | 6 | 100 | 240 | Point | AS200901539 |  | YPO2469 | Several – repetitive region | 2895483 | Possible misassembly
>gi|16120353|ref|NC_003143.1 | 2769562 | --> |  | gi|16120353|ref|NC_003143.1 | 2769682 | <-- |  | 3 | 100 | 119 | Point | AS200901509 |  | YPO2469 | Several – repeat region
>gi|16120353|ref|NC_003143.1 | 3081558 | --> |  | gi|16120353|ref|NC_003143.1 | 3081623 | <-- |  | 12 | 66.67 | 64 | Point | AS200901509 |  | repeat region
>gi|16120353|ref|NC_003143.1 | 3081558 | --> |  | gi|16120353|ref|NC_003143.1 | 3081631 | <-- |  | 21 | 80.95 | 72 | Point | BA200901990
>gi|16120353|ref|NC_003143.1 | 3081558 | --> |  | gi|16120353|ref|NC_003143.1 | 3081623 | <-- |  | 9 | 44.44 | 64 | Point | AS200902147
>gi|16120353|ref|NC_003143.1 | 3081565 | --> |  | gi|16120353|ref|NC_003143.1 | 3081630 | <-- |  | 9 | 44.44 | 64 | Point | AS200901434
>gi|16120353|ref|NC_003143.1 | 3081574 | --> |  | gi|16120353|ref|NC_003143.1 | 3081631 | <-- |  | 11 | 72.73 | 56 | Point | AS200901156
>gi|16120353|ref|NC_003143.1 | 3116221 | --> |  | gi|16120353|ref|NC_003143.1 | 3116395 | <-- |  | 9 | 88.89 | 173 | Point | BA200902009 | 173 bp deletion | ulaA ascorbate specific PTS system enzyme IIC YPO2782 | 3116003-3116221 | 3116396-3116502
>gi|16120353|ref|NC_003143.1 | 3304214 | --> |  | ? | ? | ? |  | 20 | 100 | - | Point | BA200901990 | New IS1541 Insertion | Intergenic | IS1541 | IS1541
>gi|16120353|ref|NC_003143.1 | 3304214 | --> |  | ? | ? | ? |  | 12 | 100 | - | Point | BA200902009
>gi|16120353|ref|NC_003143.1 | 3304217 | <-- |  | ? | ? | ? |  | 16 | 100 | - | Point | BA200901990
>gi|16120353|ref|NC_003143.1 | 3304217 | <-- |  | ? | ? | ? |  | 9 | 100 | - | Point | BA200902009
>gi|16120353|ref|NC_003143.1 | 3332702 | --> |  | gi|16120353|ref|NC_003143.1 | 3332868 | <-- |  | 6 | 100 | 165 | Point | AS200901509 | tRNA locus |  | 3332454-3332677 | 3332869-3332958
>gi|16120353|ref|NC_003143.1 | 3332702 | --> |  | gi|16120353|ref|NC_003143.1 | 3332868 | <-- |  | 8 | 100 | 165 | Point | AS200902147
>gi|16120353|ref|NC_003143.1 | 3346949 | <-- |  | ? | ? | ? |  | 6 | 100 | - | Point | AS200901509 | New IS100 Insertion | Putative 2-component system sensor kinase YPO 2997 | IS100 | IS100
>gi|16120353|ref|NC_003143.1 | 3346949 | <-- |  | ? | ? | ? |  | 7 | 100 | - | Point | AS200902147
>gi|16120353|ref|NC_003143.1 | 3346950 | --> |  | ? | ? | ? |  | 11 | 90.91 | - | Point | AS200901509
>gi|16120353|ref|NC_003143.1 | 3346950 | --> |  | ? | ? | ? |  | 4 | 100 | - | Point | AS200902147
>gi|16120353|ref|NC_003143.1 | 3682642 | <-- |  | ? | ? | ? |  | 14 | 28.57 | - | Point | BA200901990 |  | Putative DNA-binding transcirptional regulator YPO2388 | None | none
>gi|16120353|ref|NC_003143.1 | 3757789 | <-- |  | ? | ? | ? |  | 5 | 60 | - | Point | AS200901434 | New IS100 Insertion | cysH | IS100 | IS100
>gi|16120353|ref|NC_003143.1 | 3757791 | <-- |  | ? | ? | ? |  | 16 | 100 | - | 72 | AS200901509
>gi|16120353|ref|NC_003143.1 | 3757791 | --> |  | ? | ? | ? |  | 14 | 100 | - | 64 | AS200901509
>gi|16120353|ref|NC_003143.1 | 3757791 | --> |  | ? | ? | ? |  | 6 | 100 | - | Point | AS200902147
>gi|16120353|ref|NC_003143.1 | 3757791 | <-- |  | ? | ? | ? |  | 10 | 100 | - | Point | AS200902147
>gi|16120353|ref|NC_003143.1 | 3757798 | --> |  | ? | ? | ? |  | 6 | 66.67 | - | Point | AS200901434 |  | cysH | IS100 | IS100
>gi|16120353|ref|NC_003143.1 | 3762521 | --> |  | gi|16120353|ref|NC_003143.1 | 3762679 | <-- |  | 5 | 100 | 157 | Point | BA200901799 | 157 bp deletion | Intergenic | 3762333-3762468 | 3762679-3762739
>gi|16120353|ref|NC_003143.1 | 4000979 | --> |  | gi|16120353|ref|NC_003143.1 | 4417515 | --> |  | 19 | 26.32 | 416535 | Point | AS200901509 |  | IS1661/YPO0399 | 4001006-4001110 | Several-repeat region
>gi|16120353|ref|NC_003143.1 | 4000979 | --> |  | gi|16120353|ref|NC_003143.1 | 4417515 | --> |  | 24 | 29.17 | 416535 | Point | BA200901990
>gi|16120353|ref|NC_003143.1 | 4000979 | --> |  | gi|16120353|ref|NC_003143.1 | 4417515 | --> |  | 36 | 25 | 416535 | Point | CO92
>gi|16120353|ref|NC_003143.1 | 4077783 | --> |  | gi|16120353|ref|NC_003143.1 | 4077908 | <-- |  | 16 | 68.75 | 124 | Point | BA200901990 |  | Intergenic | 4077616-4077690 | 4077908-4078078 | some repetitive structure here
>gi|16120353|ref|NC_003143.1 | 4268414 | --> |  | ? | ? | ? |  | 11 | 27.27 | - | Point | AS200901509 |  | Intergenic, promoter region of YPO3802
>gi|16120353|ref|NC_003143.1 | 4280835 | <-- |  | ? | ? | ? |  | 19 | 47.37 | - | Point | AS200901156 |  | ftsY | repetitive region
>gi|16120353|ref|NC_003143.1 | 4280835 | <-- |  | ? | ? | ? |  | 12 | 41.67 | - | Point | AS200901509
>gi|16120353|ref|NC_003143.1 | 4280835 | <-- |  | ? | ? | ? |  | 19 | 52.63 | - | Point | BA020091799
>gi|16120353|ref|NC_003143.1 | 4280895 | --> |  | ? | ? | ? |  | 11 | 36.36 | - | Point | AS200901509 |  | ftsY | repetitive region | 4280842-4281057
>gi|16120353|ref|NC_003143.1 | 4280895 | --> |  | ? | ? | ? |  | 26 | 34.62 | - | Point | BA020091799
>gi|16120353|ref|NC_003143.1 | 4302749 | <-- |  | ? | ? | ? |  | 27 | 25.93 | - | Point | BA020091799 |  | pldA phospholipase A YPO3834 | IS100 | IS100
>gi|16120353|ref|NC_003143.1 | 4303391 | <-- |  | ? | ? | ? |  | 9 | 55.56 | - | Point | AS200902147 |  | intergenic, immediately follows pldA
>gi|16120353|ref|NC_003143.1 | 4612615 | <-- |  | ? | ? | ? |  | 13 | 100 | - | Point | AS200901539 | New IS100 Insertion | YPO4093 sugar phosphatase | IS100 | IS100
>gi|16120353|ref|NC_003143.1 | 4612615 | <-- |  | ? | ? | ? |  | 8 | 62.5 | - | Point | BA200901799
>gi|16120353|ref|NC_003143.1 | 4612615 | <-- |  | ? | ? | ? |  | 15 | 73.33 | - | Point | AS200902147
>gi|16120353|ref|NC_003143.1 | 4612616 | <-- |  | ? | ? | ? |  | 21 | 57.14 | - | Point | AS200901156
>gi|16120353|ref|NC_003143.1 | 4612616 | <-- |  | ? | ? | ? |  | 10 | 90 | - | Point | AS200901509
>gi|16120353|ref|NC_003143.1 | 4612616 | <-- |  | ? | ? | ? |  | 16 | 81.25 | - | Point | BA020091799
>gi|16120353|ref|NC_003143.1 | 4612616 | <-- |  | ? | ? | ? |  | 24 | 95.83 | - | Point | BA200901990
>gi|16120353|ref|NC_003143.1 | 4612616 | <-- |  | ? | ? | ? |  | 12 | 66.67 | - | Point | BA200902009
>gi|16120353|ref|NC_003143.1 | 4612617 | --> |  | ? | ? | ? |  | 14 | 100 | - | Point | AS200901156 | New IS100 Insertion | YPO4093 sugar phosphatase | IS100 | IS100
>gi|16120353|ref|NC_003143.1 | 4612617 | --> |  | ? | ? | ? |  | 10 | 100 | - | Point | AS200901539
>gi|16120353|ref|NC_003143.1 | 4612617 | --> |  | ? | ? | ? |  | 4 | 100 | - | Point | BA200901703
>gi|16120353|ref|NC_003143.1 | 4612617 | --> |  | ? | ? | ? |  | 21 | 100 | - | Point | BA020091799
>gi|16120353|ref|NC_003143.1 | 4612617 | --> |  | ? | ? | ? |  | 22 | 100 | - | Point | BA200901990
>gi|16120353|ref|NC_003143.1 | 4612617 | --> |  | ? | ? | ? |  | 14 | 100 | - | Point | BA200902009
>gi|16120353|ref|NC_003143.1 | 4612617 | --> |  | ? | ? | ? |  | 9 | 100 | - | Point | AS200902147
>gi|16120353|ref|NC_003143.1 | 4612626 | --> |  | ? | ? | ? |  | 8 | 75 | - | Point | AS200901434
>gi|16120353|ref|NC_003143.1 | 4653728 | --> |  | ? | ? | ? |  | 7 | 100 | - | Point | AS200901434 |  | Chrom terminus