Spreadsheet: 4a23304e-7e75-4329-9765-97f004876fed
Sheet: Sheet1

chromosome | position* | [NAME] | frequency | sample size | left end | right end | PHS | location | gene ID | description
1 | 3607837-75 | 39 bp deletion | 6 | 96 | 1042028 | 5923561 | 4.7601 | 3' UTR | At1g10840 | TIF3H1; eukaryotic translation initiation factor 3 subunit 3
1 | 13925316 | T | 6 | 96 | 3229453 | 23821158 | 5.7814 | Repetitive element | At1g36770 | gypsy-like retrotransposon family
1 | 21080288 | A | 74 | 95 | 20738912 | 21141319 | 0.6399 | Syn | At1g56290 | CwfJ-like family protein
1 | 21669059 | T | 61 | 84 | 21563945 | 21669588 | 0.5999 | Syn | At1g58350 | ZW18; expressed protein
1 | 28190589 | C | 71 | 96 | 27959121 | 28408814 | 0.7392 | Syn | At1g75080 | BZR1; brassinosteroid signalling positive regulator
2 | 5086023 | G | 6 | 93 | 2171791 | 7433513 | 4.634 | Repetitive element | At2g12490 | copia-like retrotransposon family
2 | 5250540 | A | 5 | 62 | 3393477 | 7352838 | 4.5137 | Repetitive element | At2g12770 | non-LTR retrotransposon family
2 | 7073005 | G | 3 | 95 | 172277 | 11850986 | 6.5689 | Pseudogene | At2g16310 | pseudogene, [NAME]-related protein
2 | 9256270-1 | 2 bp deletion | 6 | 94 | 6654153 | 11595138 | 3.9949 | Intron | At2g21620 | RD2; universal stress protein (USP) family protein / responsive to dessication protein
2 | 9361318 | T | 10 | 91 | 8659687 | 10050365 | 4.8684 | Nonsyn | At2g21950 | SKP1 interacting partner 6 (SKIP6)
2 | 9819642 | C | 3 | 75 | 9550714 | 11850986 | 5.9461 | 3' UTR | At2g23050 | phototropic-responsive NPH3 family protein; response to light stimulus
2 | 9964707 | ACTGGC insertion | 27 | 96 | 9550714 | 10400703 | 2.2569 | In-frame insertion | At2g23380 | CLF; curly leaf protein; leaf morphogenesis
2 | 10134400 | C | 19 | 96 | 9550714 | 11178939 | 2.9453 | Nonsyn | At2g23790 | expressed protein
2 | 10566612 | C | 14 | 96 | 9428891 | 11850986 | 3.5382 | Nonsyn | At2g24762 | expressed protein
2 | 11457225 | C | 12 | 96 | 10900127 | 12187491 | 3.1786 | Nonsyn | At2g26850 | F-box family protein; similar to SKP1 interacting partner 2 (SKIP2)
2 | 11456894-7 | 4 bp deletion | 67 | 95 | 11028504 | 11457499 | 0.9087 | Intron | At2g26850 | F-box family protein; similar to SKP1 interacting partner 2 (SKIP2)
2 | 11564935 | A | 20 | 96 | 10566416 | 12014448 | 3.2314 | Syn | At2g27070 | ARR13; two-component responsive regulator family protein
3 | 11350490 | A | 3 | 62 | 7590422 | 14673136 | 5.8576 | Intergenic | At3g29515:At3g29520 | non-LTR retrotransposon family: pseudogene, hypothetical protein
4 | 269962 | 16 bp deletion | 9 | 95 | 142440 | 748157 | 5.6681 | Frameshift deletion | At4g00650 | FRI; FRIGIDA protein
4 | 428792 | T | 6 | 95 | 268715 | 2241604 | 4.926 | Intron | At4g00990 | transcription factor [NAME] ([NAME]) domain-containing protein
4 | 641613 | G | 12 | 96 | 541028 | 1322536 | 4.9551 | Intergenic | At4g01500:At4g01510 | DNA-binding protein, putative:similar to transmembrane ARV1-like family protein
4 | 1055208 | T | 75 | 95 | 747636 | 1055626 | 1.29 | Syn | At4g02400 | U3 ribonucleoprotein (Utp) family protein
4 | 1145098 | C | 10 | 94 | 747636 | 1322536 | 3.2218 | Intron | At4g02600 | seven transmembrane MLO family protein / MLO-like protein 1; cell death, defense response
4 | 2441355 | A | 11 | 95 | 1055093 | 5078001 | 5.5296 | Intergenic | At4g04800:At4g04810 | methionine sulfoxide reductase domain-containing protein (both)
4 | 9578374 | C | 3 | 80 | 9376858 | 13358833 | 5.1693 | Intron | At4g17020 | transcription factor-related
4 | 14732311 | G | 4 | 94 | 12978424 | 17152239 | 4.9296 | Intron | At4g30120 | HMA3; ATPase E1-E2 type family protein / heavy-metal-associated domain-containing protein; metal ion transport
4 | 15727497 | C | 31 | 96 | 15368323 | 16025877 | 1.8501 | Syn | At4g32610 | mitochondrial glycoprotein family protein / MAM33 family protein
5 | 2244619 | G | 20 | 95 | 1841010 | 3289479 | 2.3425 | Nonsyn | At5g07200 | YAP169; gibberellin 20-oxidase; gibberellic acid biosynthesis
5 | 2296407 | A | 44 | 90 | 2244524 | 2799420 | 1.2802 | Nonsyn | At5g07290 | RNA recognition motif (RRM)-containing protein, Mei2-like protein
5 | 2799315 | 7 bp deletion | 62 | 96 | 2591893 | 2900468 | 0.7862 | Intron | At5g08630 | DDT domain-containing protein
5 | 9723136 | G | 11 | 90 | 9722715 | 9926079 | 2.9567 | Intron | At5g27540 | GTP-binding protein-related
5 | 10909786 | C | 5 | 71 | 7004132 | 15768566 | 5.2315 | Pseudogene | At5g28892 | pseudogene, similar to putative helicase
*all positions relative to the TIGR reference genome release 1/22/2004