Spreadsheet: 5e12b118-5403-424f-9bf7-2e165303d32c
Sheet: Sheet1

Table S4. The position of bin markers in the B73 physical map and RefGen_v1 | Unnamed: 1 | Unnamed: 2 | Unnamed: 3 | Unnamed: 4 | Unnamed: 5 | Unnamed: 6 | Unnamed: 7 | Unnamed: 8 | Unnamed: 9 | Unnamed: 10
Marker | Chr | Bin | [NAME] | Original Map | Typeb | Seq. [NAME] | Startd | [NAME] | clone | PFC Ctg
tub1 | 1 | 1.01 | 2.5 | IBM2 | F | X52878 | 2022607 | 2024984 | c0363D20 | 1
umc157a(chn) | 1 | 1.02 | 114.4 | IBM2 | P | G10823 | 12357364 | 12357663 | c0140E02 | 5
umc76a | 1 | 1.03 | 198.4 | IBM2 | F | G10866 | 29364559 | 29364266 | c0380M20 | 9
asg45(ptk) | 1 | 1.04 | 294.28 | LHRF Gnp2004 | P | AY771210 | 52239800 | 52240131 | b0109M14 | 12
csu3 | 1 | 1.05 | 405 | IBM2 | F | DQ123891 | 81360132 | 81360551 | c0122B13 | 20
umc67a | 1 | 1.06 | 496.6 | IBM2 | P | G13173 | 175505327 | 175505029 | c0152A14 | 36
asg62 | 1 | 1.07 | 607.3 | IBM2 | F | DQ001865 | 198707401 | 198707865 | c0479A09 | 41
umc128a | 1 | 1.08 | 722.4 | IBM2 | F | umc128 | 227601774 | 227602233 | b0310F15 | 46
cdj2 | 1 | 1.09 | 812.3 | IBM2 | F | AY109456 | 252192856 | 252193562 | b0611E16 | 52
umc107a(croc) | 1 | 1.1 | 886.9 | IBM2 | P | G10803 | 266927146 | 266927488 | c0293G16 | 56
umc161a | 1 | 1.11 | 963.6 | IBM2 | F | AY771212 | 282140672 | 282141394 | c0086K08 | 61
bnl6.32 | 1 | 1.12 | 1113.2 | IBM2 | F | bnl6.32 | 296840063 | 296840574 | c0455B14 | 63
bnl8.45a | 2 | 2.01 | 3.3 | LHRF Gnp2004 | P | G10776 | 1546872 | 1547084 | b0252P05 | 68
lox6 | 2 | 2.02 | 50.9 | IBM2 | F | AY771214 | 4175012 | 4174428 | c0468P22 | 69
umc6a | 2 | 2.03 | 164.8 | IBM2 | F | [NAME] | 14920255 | 14920433 | c0530G21 | 72
umc34 | 2 | 2.04 | 243.3 | IBM2 | F | DQ001866 | 28063927 | 28064503 | c0030B11 | 74
umc131 | 2 | 2.05 | 342.4 | IBM2 | F | umc131 | 71031565 | 71031939 | c0244C01 | 82
umc255a | 2 | 2.06 | 364.5 | IBM2 | P | umc255 | 149697523 | 149697768 | b0120F07 | 90
umc5a | 7 | 2.07 | 405.76 | LHRF Gnp2004 | P | umc5 | 116650892 | 116650654 | b0022A14 | 315
asg20 | 2 | 2.08 | 478.7 | IBM2 | F | DQ123894 | 201356132 | 201355954 | c0158O02 | 103
umc49a | 2 | 2.09 | 591.5 | IBM2 | F | DQ123895 | 219604574 | 219604915 | c0184K09 | 108
php20581b(tb) | 2 | 2.1 | 692.71 | IBM gnp2004 | P | G10795 | 231788583 | 231788397 | b0109B01 | 109
umc32a | 3 | 3.01 | 11.3 | UMC98 | P | umc32 | 1726276 | 1725856 | c0286H14 | 111
csu32a | 3 | 3.02 | 60 | IBM2 | F | DQ123896 | 3837012 | 3837402 | c0299P11 | 111
asg24a(gts) | 3 | 3.03 | 109 | IBM2 | P | AY771217 | 8405715 | 8482306 | b0166B24 | 112
asg48a | 3 | 3.04 | 152.7 | IBM2 | F | G13184 | 12862813 | 12862593 | c0385I07 | 113
umc102a | 3 | 3.05 | 297.9 | IBM2 | F | DQ005498 | 122406867 | 122407553 | c0072M24 | 124
im30p1 | 3 | 3.06 | 391.4 | IBM2 | P | G10766 | 166733121 | 166732779 | b0583P10 | 131
bnl6.16a | 3 | 3.07 | 520.7 | IBM2 | F | G10768 | 189303505 | 189303133 | c0328L01 | 138
umc17a | 3 | 3.08 | 585.5 | IBM2 | F | AY771218 | 203506017 | 203506852 | b0460H12 | 145
[NAME] | 3 | 3.09 | 697.2 | IBM2 | F | G10857 | 214210836 | 214210676 | b0347M11 | 147
cyp1 | 3 | 3.1 | 845.23 | LHRF Gnp2004 | P | DQ005499 | 230486027 | 230486291 | b0147G12 | 153
agrr115a | 4 | 4.01 | -105.4 | INDEL IBM 2003 | P | Ac188003 | 1125945 | 1126028 | c0319D19 | 154
php20725a | 4 | 4.02 | 83.7 | IBM2 | F | php20725 | 5031692 | 5031236 | c0026E06 | 156
umc31a | 4 | 4.03 | 135.1 | IBM2 | P | G10836 | 11329558 | 11329251 | b0150M11 | 158
npi386a(eks) | 4 | 4.04 | 211.4 | IBM2 | P | DQ007988 | 21446729 | 21447162 | c0424F17 | 160
agrr37b | 7 | 4.05 | 245.5 | UMC98 | P | G10749 | 122392018 | 122392358 | c0191I17 | 318
umc156a | 4 | 4.06 | 316.13 | LHRF Gnp2004 | P | umc156 | 150207181 | 150206689 | c0011J17 | 246
umc66a(lcr) | 4 | 4.07 | 397.4 | IBM2 | P | DQ007989 | 170127442 | 170128483 | c0216J18 | 182
umc127c | 4 | 4.08 | 443.92 | UMC98 | P | umc127 | 178890267 | 178890481 | b0468G20 | 182
umc52a | 4 | 4.09 | 559 | IBM2 | F | DQ123899 | 210595010 | 210594187 | c0339H22 | 193
php20608a | 4 | 4.1 | 669.8 | IBM2 | F | php20608 | 242314416 | 242313952 | b0129I22 | 201
umc169a | 4 | 4.11 | 728.5 | IBM2 | F | umc169 | 245062305 | 245062656 | b0429C04 | 202
npi409a | 5 | 5.01 | 69.5 | IBM2 | F | G10788 | 3319000 | 3318743 | c0484E01 | 204
umc90 | 5 | 5.02 | 142.18 | LHRF Gnp2004 | P | G10871 | 7955554 | 7955713 | b0276N13 | 207
tub4 | 5 | 5.03 | 197.5 | UMC98 | P | DQ007991 | 14752661 | 14752861 | b0613H05 | 210
bnl4.36 | 5 | 5.04 | 301.6 | IBM2 | F | bnl4.36 | 80096190 | 80096577 | c0422H10 | 225
csu93b | 9 | 5.05 | 387 | UMC98 | P | DQ015673 | 140571026 | 140571510 | c0471K24 | 389
umc126a | 5 | 5.06 | 469.6 | IBM2 | P | umc126 | 190081336 | 190081798 | c0343F19 | 500
umc108 | 5 | 5.07 | 536.6 | IBM2 | F | G10805 | 207119780 | 207120044 | c0162J17 | 252
bnl5.24a | 5 | 5.08 | 609.4 | IBM2 | F | bnl5.24 | 210954828 | 210954657 | c0078D20 | 253
php10017 | 5 | 5.09 | 669.4 | IBM2 | F | AY771221 | 214557670 | 214557145 | c0545A13 | 254
umc85a | 6 | 6.01 | 66.4 | IBM2 | F | AY772450 | 8293809 | 8293249 | c0527M07 | 260
umc59a | 6 | 6.02 | 121.09 | LHRF Gnp2004 | P | umc59 | 84751869 | 84751575 | c0474K15 | 271
npi393 | 6 | 6.03 | 149.49 | UMC98 | P | DQ015674 | 96869815 | 96870445 | c0336K13 | 273
umc65a | 6 | 6.04 | 181.9 | IBM2 | F | AY772451 | 104605224 | 104604534 | b0325K21 | 276
umc21 | 6 | 6.05 | 240.8 | IBM2 | F | DQ123901 | 120889794 | 120890794 | c0137G13 | 281
umc38a | 6 | 6.06 | 385.8 | IBM2 | F | G10842 | 153911455 | 153911657 | c0488H22 | 287
umc132a(chk) | 6 | 6.07 | 444.2 | IBM2 | P | umc132 | 161255420 | 161254977 | c0491I19 | 287
asg7a | 6 | 6.08 | 573.3 | UMC98 | P | G10760 | 166984700 | 166984346 | c0136L04 | 289
asg8(myb) | 7 | 7.01 | 61.3 | IBM2 | P | G10762 | 4713210 | 4712891 | c0152F01 | 294
asg34a(msd) | 7 | 7.02 | 132 | IBM2 | P | G10755 | 13740615 | 13740120 | c0224J10 | 296
asg49 | 7 | 7.03 | 298.31 | LHRF Gnp2004 | P | G10759 | 122392005 | 122392321 | c0191I17 | 318
umc254 | 7 | 7.04 | 408.1 | IBM2 | F | umc254 | 150359950 | 150359472 | c0514E05 | 322
umc245 | 7 | 7.05 | 532 | IBM2 | F | AY772452 | 162579467 | 162579713 | c0463K05 | 325
umc168 | 7 | 7.06 | 608.2 | IBM2 | F | umc168 | 168586284 | 168586523 | c0526N17 | 325
npi220a | 8 | 8.01 | 0 | IBM2 | F | DQ059319 | 1817377 | 1816972 | b0015J21 | 326
bnl9.11a(lts) | 8 | 8.02 | 121.76 | LHRF Gnp2004 | P | G10778 | 10190758 | 10190462 | c0239H04 | 326
umc124a(chk) | 8 | 8.03 | 176.6 | IBM2 | P | DQ059320 | 21182740 | 21183692 | c0378A15 | 329
bnl7.08a | 8 | 8.04 | 298.56 | IBM GNP2004 | P | PCR primers | 119401239 | 119488241 | Z_AI-0059C11 | 350
bnl2.369 | 8 | 8.05 | 329.4 | IBM2 | F | AC199930 | 120856415 | 120994647 | c0129D23 | 352
csu31a | 8 | 8.06 | 383.71 | LHRF Gnp2004 | P | T12667 | 145511275 | 145511474 | c0277O18 | 358
npi268a | 8 | 8.07 | 459.2 | IBM2 | F | DQ123903 | 164404769 | 164404492 | b0330O10 | 363
npi414a | 8 | 8.08 | 509.8 | IBM2 | F | G10790 | 168488276 | 168488097 | c0169J03 | 363
agrr21 | 8 | 8.09 | 580.1 | IBM2 | F | CC827670 | 171826642 | 171827355 | c0436F06 | 366
umc109 | 9 | 9.01 | 5 | IBM2 | F | AY772454 | 3273718 | 3272975 | b0062C22 | 368
bz1 | 9 | 9.02 | 90.1 | IBM2 | F | AY110944 | 11654462 | 11654214 | c0482F22 | 370
wx1 | 9 | 9.03 | 191.7 | IBM2 | F | X03935 | 23214846 | 23217669 | b0009C20 | 373
[NAME] | 9 | 9.04 | 273.63 | LHRF Gnp2004 | P | T12740 | 97782019 | 97782157 | c0394I15 | 376
umc95 | 9 | 9.05 | 320.6 | IBM2 | F | AY772455 | 122584627 | 122583968 | c0286K12 | 385
[NAME] | 9 | 9.06 | 364.49 | UMC98 | P | T12697 | 131777209 | 131777296 | c0428E02 | 387
asg12a | 9 | 9.07 | 536.1 | IBM2 | F | asg12 | 143550077 | 143550542 | c0336O16 | 390
csu54b | 9 | 9.08 | 643.82 | IBM Gnp2004 | P | T12684 | 150275863 | 150275941 | c0546N19 | 391
php20075a(gast) | 10 | 10.01 | 34.8 | IBM2 | P | DQ059321 | 2133064 | 2131754 | b0191E02 | 392
npi285a(cac) | 10 | 10.02 | 100.56 | IBM SNP 2007 | P | G10785 | 4531944 | 4531656 | c0036P07 | 392
umc130 | 10 | 10.03 | 160 | IBM2 | F | DQ059322 | 13608100 | 13608733 | c0438P11 | 394
umc64a | 10 | 10.04 | 242.3 | IBM2 | F | umc64 | 85631466 | 85631734 | c0187I11 | 406
umc259a | 10 | 10.05 | 309 | IBM2 | F | G16025 | 127591544 | 127591321 | c0510K24 | 413
umc44a | 10 | 10.06 | 375.95 | LHRF Gnp2004 | P | G10843 | 136918384 | 136918632 | c0516D12 | 414
bnl7.49a(hmd) | 10 | 10.07 | 437.6 | IBM20 | P | G10775 | 142982926 | 142982648 | b0195H24 | 417
a genetic position; b marker type, P, placement, not as accurate as Framework (F); c sequence resource, marker  names with
no GenBank accession number indicated the sequences are available at web shown in the text; d  positions in B73 RefGen_v1.