Spreadsheet: 00a87931-a5aa-4d30-aada-60361d61e4b0
Sheet: Sheet1

Table S3. List of strains | Unnamed: 1 | Unnamed: 2 | Unnamed: 3 | Unnamed: 4 | Unnamed: 5 | Unnamed: 6
Strain | Strain No. | geographic origin | ethnic origin | cag PAI | Population | Citation
26695 |  | UK | European | + | hpEurope | [NAME], 1997
J99 |  | USA | European | + | hspWAfrica | Alm et al., 1999
CC28C | 1 | South Africa | Cape Coloured | + | hspSAfrica | [NAME], 1998
CC25A | 2 | South Africa | Cape Coloured | + | hspSAfrica | Falush et al., 2003
CC31A | 3 | South Africa | Cape Coloured | + | hspSAfrica | Falush et al., 2003
C164 | 4 | South Africa | Cape Coloured | + | hspWAfrica | Falush et al., 2003
LSU2003-1 | 5 | USA | Black | + | hspWAfrica | Falush et al., 2001
D3a | 6 | Senegal | Black | + | hspWAfrica | Falush et al., 2003
CC42C | 7 | South Africa | Cape Coloured | + | hspSAfrica | Falush et al., 2003
CC2C | 8 | South Africa | Cape Coloured | + | hspSAfrica | Falush et al., 2003
[NAME] | 9 | Colombia | Mestizo | + | hpEurope | Falush et al., 2001
H1418 | 10 | Bangladesh | [NAME] | + | hpEurope | Falush et al., 2003
L60 | 11 | India | Indian | - | hpEurope | Falush et al., 2003
L44 | 12 | India | Indian | - | hpEurope | Falush et al., 2003
LSU1010-1 | 13 | USA | European | - | hpEurope | Falush et al., 2001
BO265 | 14 | Germany | European | + | hpEurope | [NAME], 1998
111UK | 15 | UK | European | + | hpEurope | Falush et al., 2003
094UK | 16 | UK | European | - | hpEurope | Falush et al., 2003
097UK | 17 | UK | European | - | hpEurope | Falush et al., 2003
CM71 | 18 | Italy | European | + | hpEurope | Falush et al., 2003
131UK | 19 | UK | European | - | hpEurope | Falush et al., 2003
127UK | 20 | UK | European | + | hpEurope | Falush et al., 2003
123UK | 21 | UK | European | - | hpEurope | Falush et al., 2003
101UK | 22 | UK | European | + | hpEurope | Falush et al., 2003
L72 | 23 | India | Indian | + | hpAsia2 | Wirth et al., 2004
L15 | 24 | India | Indian | + | hpAsia2 | Wirth et al., 2004
L67 | 25 | India | Indian | + | hpAsia2 | Falush et al., 2003
L7 | 26 | India | Indian | + | hpAsia2 | Wirth et al., 2004
L128 | 27 | India | Indian | + | hpAsia2 | Wirth et al., 2004
RE7006 | 28 | Singapore | East Asian | + | hpAsia2 | Falush et al., 2003
L133 | 29 | India | Indian | + | hspEAsia | Wirth et al., 2004
N2 | 30 | Korea | East Asian | + | hspEAsia | Falush et al., 2003
GU5 | 31 | Korea | East Asian | + | hspEAsia | Falush et al., 2003
RE8038 | 32 | Singapore | East Asian | + | hspEAsia | Falush et al., 2003
RE8030 | 33 | Singapore | East Asian | + | hspEAsia | Falush et al., 2003
RE12001 | 34 | Singapore | East Asian | + | hspEAsia | Falush et al., 2003
inma51 | 35 | New Zealand | Maori | + | hspMaori | Falush et al., 2003
inma50 | 36 | New Zealand | Maori | + | hspMaori | Falush et al., 2003
M49 | 37 | New Zealand | Maori | + | hspMaori | Falush et al., 2003
V225 | 38 | Venezuela | Piaroa | +/- | hspAmerind | Falush et al., 2003
HUI1692 | 39 | Colombia | Huitoto | +/- | hspAmerind | Falush et al., 2003
Ala5 | 40 | Alaska/USA | Eskimo | - | hspAmerind | Falush et al., 2003
inma13 | 41 | Canada | Athabaskan | - | AmerindB | Falush et al., 2003
inma10 | 42 | Canada | Athabaskan | - | AmerindB | Falush et al., 2003
inma14 | 43 | Canada | Athabaskan | - | AmerindB | Falush et al., 2003
Ala3 | 44 | Alaska/USA | Eskimo | - | hspAmerind | Falush et al., 2003
AinuN839 | 45 | Japan | Ainu | - | hspAmerind
Ainu721 | 46 | Japan | Ainu | - | hspAmerind
Ainu711 | 47 | Japan | Ainu | - | hspAmerind
CC53C | 48 | South Africa | Cape Coloured | - | hpEurope | Falush et al., 2003
SA194A1 | 49 | South Africa | Black | - | hpAfrica2
129.0 | 50 | South Africa | Black | - | hpAfrica2 | Falush et al., 2003
162.0 | 51 | South Africa | Black | - | hpAfrica2 | Falush et al., 2003
SA253A1 | 52 | South Africa | Black | - | hpAfrica2
SA172C1 | 53 | South Africa | Black | - | hpAfrica2
SA155A1 | 54 | South Africa | Black | - | hpAfrica2
SA144A1 | 55 | South Africa | Black | - | hpAfrica2
SA251A1 | 56 | South Africa | Black | - | hpAfrica2
BombayB | 57 | Russian Circus | tiger | - | H. acinonychis
India | 58 | Russian Circus | tiger | - | H. acinonychis | [NAME], 2004
HA5141 | 59 | Zoo in USA | cheetah | - | H. acinonychis | Eaton et al., 1993
Sheba | 60 | Russian Circus | lion | - | H. acinonychis | [NAME], 2004
NOTE: Strain No. are the numbers used in Figures 4, S1 and S3-4
Citations:
[NAME], Nature 388:539-547, 1997
Alm et al., Nature 397:176-180, 1999
[NAME], Proc.Natl.Acad.Sci.(U.S.A.) 95:12619-12624, 1998
Falush et al., Science 299:1582-1585, 2003
Falush et al., Proc.Natl.Acad.Sci.(U.S.A.) 98:15056-15061, 2001
Wirth et al., Proc.Natl.Acad.Sci.(U.S.A.) 101:4746-4751, 2004
[NAME], J.Bacteriol. 186 (2):356-365, 2004
Eaton et al., [NAME].J.Syst.Bacteriol. 43 (1):99-106, 1993