Spreadsheet: 50d8a3b6-8a2a-48b7-99a6-9b388eb697d2
Sheet: Table S4

Table S4. Identification of coexpressed genes using GeneNetwork
LincRNA gene | coexpressed genes | coexpressed gene Ensemble ID | chr | start | stop | z-score | P-value
XLOC_009878 or RP1-46F2.2 or [NAME] | MYL2 | ENSG00000111245 | 12 | 111348638 | 111358526 | 14.37 | 7.98312473104495e-47
 | MYH2 | ENSG00000125414 | 17 | 10368772 | 10453274 | 13.93 | 4.16355497781312e-44
 | MIR133A1 | ENSG00000207786 | 18 | 19405659 | 19405746 | 13.75 | 5.09295263194802e-43
 | [NAME] | ENSG00000170807 | 7 | 123295861 | 123304344 | 13.3 | 2.31468325673813e-40
 | [NAME] | ENSG00000174429 | 8 | 107771711 | 107782473 | 13.05 | 6.35474028937904e-39
 | [NAME] | ENSG00000163092 | 2 | 167744997 | 168116263 | 12.89 | 5.12438112508701e-38
 | TRDN | ENSG00000186439 | 6 | 123537483 | 123958238 | 12.84 | 9.78744727369461e-38
 | ACTA1 | ENSG00000143632 | 1 | 229566992 | 229569845 | 12.98 | 1.58880579074026e-38
 | CSRP3 | ENSG00000129170 | 11 | 19203578 | 19232120 | 12.75 | 3.11745257776237e-37
 | RP11-451G4.2 | ENSG00000240045 | 3 | 155008018 | 155011564 | 12.73 | 4.02839193131525e-37
 | MYH1 | ENSG00000109061 | 17 | 10395624 | 10421860 | 12.08 | 1.34719731211741e-33
 | CASQ1 | ENSG00000143318 | 1 | 160160285 | 160171676 | 12.26 | 1.48499891702608e-34
 | MYOZ1 | ENSG00000177791 | 10 | 75391412 | 75401515 | 11.95 | 6.49252371545328e-33
 | ACTN2 | ENSG00000077522 | 1 | 236849754 | 236927931 | 11.78 | 4.94930729526302e-32
 | TNNT3 | ENSG00000130595 | 11 | 1940792 | 1959936 | 11.17 | 5.71808807056034e-29
 | ATP2A1 | ENSG00000196296 | 16 | 28889804 | 28915787 | 11.29 | 1.47036673598141e-29
 | MYL1 | ENSG00000168530 | 2 | 211154874 | 211179914 | 11.26 | 2.06758715581098e-29
 | [NAME] | ENSG00000170681 | 9 | 103340361 | 103350188 | 11.23 | 2.90478546544841e-29
 | TNNI1 | ENSG00000159173 | 1 | 201372896 | 201398994 | 11.0 | 3.82131914899738e-28
 | CKM | ENSG00000104879 | 19 | 45809672 | 45826233 | 10.99 | 4.2692609580841e-28
 | KBTBD5 | ENSG00000157119 | 3 | 42727011 | 42734036 | 10.86 | 1.78749207651522e-27
 | TNNC2 | ENSG00000101470 | 20 | 44451853 | 44462384 | 10.85 | 1.99425348186136e-27
 | MYH7 | ENSG00000092054 | 14 | 23881947 | 23904927 | 10.82 | 2.76777379800849e-27
 | LMOD3 | ENSG00000163380 | 3 | 69156023 | 69172183 | 10.63 | 2.16112479071679e-26
 | TTN | ENSG00000155657 | 2 | 179390716 | 179695529 | 10.34 | 4.64537530471956e-25
 | SLN | ENSG00000170290 | 11 | 107578104 | 107590419 | 10.28 | 8.67276015674349e-25
 | LINC00458 | ENSG00000234787 | 13 | 54689924 | 54707001 | 10.48 | 1.0674374260362e-25
 | TNNI2 | ENSG00000130598 | 11 | 1860219 | 1862910 | 10.46 | 1.31855667021735e-25
 | TCAP | ENSG00000173991 | 17 | 37820440 | 37822808 | 10.43 | 1.80888295930156e-25
 | MYL3 | [NAME] | 3 | 46899362 | 46923659 | 10.25 | 1.18343538147312e-24
 | MYLPF | ENSG00000180209 | 16 | 30386112 | 30389312 | 9.92 | 3.40756174971451e-23
 | MYOT | ENSG00000120729 | 5 | 137203480 | 137223540 | 9.88 | 5.08329097990772e-23
 | MYBPC1 | ENSG00000196091 | 12 | 101962131 | 102079796 | 9.58 | 9.70449364784082e-22
 | CA3 | ENSG00000164879 | 8 | 86285665 | 86361269 | 9.98 | 1.86466782078171e-23
 | DHRS7C | ENSG00000184544 | 17 | 9674770 | 9694614 | 9.55 | 1.29696289061546e-21
 | RPL3L | ENSG00000140986 | 16 | 1993975 | 2004679 | 9.3 | 1.40445684808832e-20
 | MYF6 | ENSG00000111046 | 12 | 81101277 | 81103253 | 9.32 | 1.16340301568611e-20
 | ATP1B4 | ENSG00000101892 | 23 | 119495967 | 119516226 | 8.93 | 4.26008792656167e-19
 | APOBEC2 | ENSG00000124701 | 6 | 41021043 | 41032465 | 8.91 | 5.10325637538202e-19
 | NRAP | ENSG00000197893 | 10 | 115348475 | 115423805 | 8.88 | 6.68603623890288e-19
 | SMTNL1 | ENSG00000214872 | 11 | 57308979 | 57318108 | 8.83 | 1.0467572384186e-18
 | UNC45B | ENSG00000141161 | 17 | 33474836 | 33516364 | 9.06 | 1.30450556131427e-19
 | KBTBD10 | ENSG00000239474 | 2 | 170366212 | 170382772 | 9.01 | 2.0605649203912e-19
 | CACNA1S | ENSG00000081248 | 1 | 201008642 | 201081694 | 8.73 | 2.54672622586597e-18
 | FBXO40 | ENSG00000163833 | 3 | 121311966 | 121349139 | 8.71 | 3.03874796314108e-18
 | COX6A2 | ENSG00000156885 | 16 | 31439055 | 31439731 | 8.82 | 1.14459721265424e-18
 | AMPD1 | ENSG00000116748 | 1 | 115215719 | 115238239 | 8.82 | 1.14459721265424e-18
 | ZSCAN10 | ENSG00000130182 | 16 | 3138895 | 3142861 | 8.7 | 3.31884173992957e-18
 | NEB | ENSG00000183091 | 2 | 152341850 | 152591001 | 8.65 | 5.14994307602382e-18
 | MYOZ2 | ENSG00000172399 | 4 | 120056939 | 120108944 | 8.32 | 8.79633125246472e-17
 | FBP2 | ENSG00000130957 | 9 | 97321002 | 97356075 | 8.26 | 1.4567246763311e-16
 | CMYA5 | ENSG00000164309 | 5 | 78985700 | 79096063 | 8.24 | 1.72210655623259e-16
 | PYGM | ENSG00000068976 | 11 | 64513861 | 64527769 | 8.22 | 2.0350318093589e-16
 | SMPX | ENSG00000091482 | 23 | 21724090 | 21776281 | 8.39 | 4.86142172146368e-17
 | HFE2 | ENSG00000168509 | 1 | 145413095 | 145417545 | 7.83 | 4.87869967220291e-15
 | PGAM2 | ENSG00000164708 | 7 | 44102326 | 44105186 | 8.13 | 4.29290434277663e-16
 | C10orf71 | ENSG00000177354 | 10 | 50507187 | 50535537 | 7.84 | 4.50546430393226e-15
 | TRIM54 | ENSG00000138100 | 2 | 27505260 | 27600344 | 7.97 | 1.58674368596479e-15
 | LRRC39 | ENSG00000122477 | 1 | 100614409 | 100643771 | 7.96 | 1.72039279714156e-15
 | LINC00314 | ENSG00000178457 | 21 | 29385682 | 29395552 | 7.62 | 2.53675716924855e-14
 | ASB5 | ENSG00000164122 | 4 | 177134824 | 177198722 | 7.69 | 1.47135026950184e-14
 | [NAME] | ENSG00000122367 | 10 | 88426549 | 88495825 | 7.66 | 1.85933083566798e-14
 | C8orf22 | ENSG00000168333 | 8 | 49966870 | 49988649 | 7.66 | 1.85933083566798e-14
 | ITGB1BP3 | ENSG00000077009 | 19 | 3933101 | 3942412 | 7.65 | 2.00979313130526e-14
 | TNNC1 | ENSG00000114854 | 3 | 52485118 | 52488086 | 7.63 | 2.34753712073433e-14
 | AC005062.2 | ENSG00000243004 | 7 | 19958604 | 20180076 | 7.32 | 2.47970955710062e-13
 | RP11-69I8.2 | ENSG00000236673 | 6 | 132223103 | 132241705 | 7.28 | 3.33820176355858e-13
 | MYBPC2 | ENSG00000086967 | 19 | 50936160 | 50969583 | 7.43 | 1.08597679325104e-13
 | RP11-766F14.2 | ENSG00000248713 | 4 | 100557686 | 100575805 | 7.03 | 2.06533538258855e-12
 | TNNT1 | [NAME] | 19 | 55644162 | 55660606 | 7.34 | 2.1359385451846e-13
 | CACNB1 | ENSG00000067191 | 17 | 37329709 | 37353902 | 7.29 | 3.09955024603841e-13
 | SYNPO2L | ENSG00000166317 | 10 | 75404639 | 75415830 | 6.93 | 4.2084062037037e-12
 | MYOZ3 | ENSG00000164591 | 5 | 150040436 | 150058927 | 6.5 | 8.03200116771823e-11
 | [NAME] | ENSG00000187715 | 3 | 127634075 | 127706514 | 6.79 | 1.12133544866313e-11
 | TXLNB | ENSG00000164440 | 6 | 139561198 | 139613276 | 7.05 | 1.78917791175398e-12
 | ANKRD2 | ENSG00000165887 | 10 | 99332198 | 99343641 | 7.04 | 1.92239832253787e-12
 | NODAL | ENSG00000156574 | 10 | 72192071 | 72207707 | 7.01 | 2.38318124772899e-12
 | LRRC2 | ENSG00000163827 | 3 | 46556913 | 46621589 | 6.68 | 2.38942249801818e-11
 | [NAME] | ENSG00000147869 | 9 | 14719722 | 14722715 | 6.67 | 2.5580342484959e-11
 | C3orf43 | ENSG00000214097 | 3 | 196233748 | 196242237 | 7.0 | 2.55962508777166e-12
 | TPM3 | ENSG00000143549 | 1 | 154127784 | 154167124 | 6.57 | 5.03152619782371e-11
 | CACNG1 | ENSG00000108878 | 17 | 65040706 | 65052913 | 6.58 | 4.70448268880834e-11
 | MB | ENSG00000198125 | 22 | 36002811 | 36033998 | 6.46 | 1.0470298121528e-10
 | FOXH1 | ENSG00000160973 | 8 | 145698795 | 145701718 | 6.44 | 1.19473502079461e-10
 | RP11-426L16.8 | ENSG00000215866 | 1 | 113362792 | 113393265 | 6.4 | 1.55376951634196e-10
 | MYOM1 | ENSG00000101605 | 18 | 3066805 | 3220106 | 6.4 | 1.55376951634196e-10
 | RP11-380P13.2 | ENSG00000251292 | 4 | 23724885 | 23735202 | 5.97 | 2.37253587245147e-09
 | [NAME] | ENSG00000079393 | 10 | 76854190 | 76868976 | 6.27 | 3.61048105462684e-10
 | XIRP1 | ENSG00000168334 | 3 | 39224701 | 39234087 | 5.88 | 4.10266482154521e-09
 | CTD-2003C8.2 | ENSG00000250041 | 11 | 10906432 | 10920869 | 5.83 | 5.5427375881893e-09
 | ACTN3 | ENSG00000248746 | 11 | 66313866 | 66330800 | 5.8 | 6.63149195665232e-09
 | MYPN | ENSG00000138347 | 10 | 69865912 | 69971774 | 5.79 | 7.03864243034922e-09
 | LECT1 | ENSG00000136110 | 13 | 53277399 | 53313947 | 6.09 | 1.12910687719161e-09
 | CAV3 | ENSG00000182533 | 3 | 8775486 | 8883492 | 6.04 | 1.54114227670849e-09
 | ZIC3 | ENSG00000156925 | 23 | 136648301 | 136659850 | 5.61 | 2.02326615110828e-08
 | STAC3 | ENSG00000185482 | 12 | 57637236 | 57644976 | 5.6 | 2.14351805166219e-08
 | C9orf135 | ENSG00000204711 | 9 | 72435709 | 72521148 | 5.98 | 2.23137620283434e-09
 | CORO6 | ENSG00000167549 | 17 | 27941774 | 27949917 | 5.98 | 2.23137620283434e-09
 | C20orf166 | ENSG00000174407 | 20 | 61147660 | 61167971 | 5.14 | 2.74738468715684e-07
 | CASQ2 | ENSG00000118729 | 1 | 116242628 | 116311435 | 5.14 | 2.74738468715684e-07
 | TMEM52 | ENSG00000178821 | 1 | 1849029 | 1850712 | 5.51 | 3.58833698716943e-08
 | TPM2 | ENSG00000198467 | 9 | 35681989 | 35691017 | 5.49 | 4.01933742563529e-08
 | TRIM63 | ENSG00000158022 | 1 | 26377795 | 26394927 | 5.03 | 4.90479836130741e-07
 | [NAME] | ENSG00000104369 | 8 | 75146935 | 75233563 | 5.4 | 6.66408969708571e-08
 | FSD2 | ENSG00000186628 | 15 | 83424114 | 83474822 | 5.4 | 6.66408969708571e-08
 | SYT6 | ENSG00000134207 | 1 | 114631914 | 114696541 | 5.25 | 1.52099210329774e-07
 | IDI2 | ENSG00000148377 | 10 | 1064847 | 1071799 | 5.64 | 1.70050164309501e-08
 | UCP3 | ENSG00000175564 | 11 | 73711326 | 73720480 | 5.22 | 1.78923130725815e-07
 | ACTC1 | ENSG00000159251 | 15 | 35080297 | 35088340 | 5.2 | 1.99288526338669e-07
 | TRIML2 | ENSG00000179046 | 4 | 189012427 | 189030757 | 5.16 | 2.46949842473033e-07
 | ZMYND17 | ENSG00000166343 | 10 | 75183339 | 75193319 | 5.57 | 2.54739335425998e-08
 | KLHL31 | ENSG00000124743 | 6 | 53512699 | 53530506 | 5.57 | 2.54739335425998e-08
 | KLHL34 | ENSG00000185915 | 23 | 21673609 | 21676448 | 5.13 | 2.89742178605017e-07
 | MYL6B | ENSG00000196465 | 12 | 56546040 | 56551771 | 5.07 | 3.97815702207425e-07
 | VGLL2 | ENSG00000170162 | 6 | 117586721 | 117594728 | 4.98 | 6.35842732370563e-07
 | [NAME] | ENSG00000131730 | 5 | 80529104 | 80562216 | 4.98 | 6.35842732370563e-07
 | RP4-792G4.2 | ENSG00000230798 | 1 | 63786555 | 63790112 | 4.95 | 7.42134815926666e-07
 | RP11-366M4.3 | ENSG00000248329 | 4 | 165798156 | 165820117 | 4.91 | 9.10763929681464e-07
 | SRL | ENSG00000185739 | 16 | 4239377 | 4292081 | 4.91 | 9.10763929681464e-07
 | PRDM14 | ENSG00000147596 | 8 | 70963886 | 70983928 | 4.9 | 9.58366553180641e-07
 | SMYD1 | ENSG00000115593 | 2 | 88367299 | 88412906 | 4.9 | 9.58366553180641e-07
 | DUSP26 | ENSG00000133878 | 8 | 33448856 | 33457624 | 4.86 | 1.17385752893327e-06
 | AC131097.4 | ENSG00000216921 | 2 | 242836136 | 242844702 | 4.85 | 1.23461474401839e-06
 | MYOM2 | ENSG00000036448 | 8 | 1993155 | 2113475 | 5.28 | 1.29183886519649e-07
 | HHLA1 | ENSG00000132297 | 8 | 133073733 | 133123406 | 5.26 | 1.44055401619319e-07
 | ATP1A2 | ENSG00000018625 | 1 | 160085549 | 160113381 | 4.76 | 1.93592959206547e-06
 | ENO3 | ENSG00000108515 | 17 | 4851387 | 4860426 | 4.68 | 2.86874916884027e-06
 | LINGO1 | ENSG00000169783 | 15 | 77905369 | 77988837 | 4.59 | 4.43246009623509e-06
 | DPPA4 | ENSG00000121570 | 3 | 109044988 | 109056419 | 4.52 | 6.18396313791237e-06
 | [NAME] | ENSG00000170417 | 2 | 103353367 | 103460352 | 4.51 | 6.48276257470679e-06
 | NPY6R | ENSG00000226306 | 5 | 137136882 | 137146440 | 4.49 | 7.12231735919512e-06
 | HLA-DPB2 | ENSG00000224557 | 6 | 33080228 | 33102442 | 4.46 | 8.19596529327272e-06
 | IGFL1 | ENSG00000188293 | 19 | 46733009 | 46734500 | 3.93 | 8.49458615775225e-05
 | ART3 | ENSG00000156219 | 4 | 76932337 | 77033955 | 4.44 | 8.99588777713582e-06
 | LEFTY2 | ENSG00000143768 | 1 | 226124298 | 226129189 | 3.91 | 9.22961211124178e-05
 | COX7A1 | ENSG00000161281 | 19 | 36641824 | 36643771 | 4.42 | 9.87009012506655e-06
 | OBSCN | ENSG00000154358 | 1 | 228395831 | 228566575 | 4.37 | 1.2424653653803e-05
 | RP11-59J5.1 | ENSG00000227877 | 10 | 61496753 | 61513203 | 4.37 | 1.2424653653803e-05
 | PDLIM3 | ENSG00000154553 | 4 | 186422903 | 186456766 | 4.32 | 1.56029200762027e-05
 | ADCK3 | ENSG00000163050 | 1 | 227085237 | 227175246 | 4.32 | 1.56029200762027e-05
 | PEBP4 | ENSG00000134020 | 8 | 22570769 | 22857513 | 4.32 | 1.56029200762027e-05
 | HRC | ENSG00000130528 | 19 | 49654458 | 49658681 | 4.8 | 1.58665630395119e-06
 | [NAME] | ENSG00000154415 | 7 | 113516832 | 113715975 | 4.29 | 1.7867311825654e-05
 | DNMT3B | ENSG00000088305 | 20 | 31350191 | 31397162 | 4.27 | 1.95472967458352e-05
 | GUCA1A | ENSG00000048545 | 6 | 42123144 | 42147794 | 4.72 | 2.35844643303279e-06
 | L1TD1 | ENSG00000240563 | 1 | 62660503 | 62678000 | 4.16 | 3.18247594381643e-05
 | [NAME] | ENSG00000169271 | 5 | 53751445 | 53752207 | 4.65 | 3.31935028874292e-06
 | SH3BGR | ENSG00000185437 | 21 | 40817781 | 40887433 | 4.65 | 3.31935028874292e-06
 | FGF19 | ENSG00000162344 | 11 | 69513000 | 69519410 | 4.65 | 3.31935028874292e-06
 | LOXHD1 | ENSG00000167210 | 18 | 44056935 | 44236996 | 4.64 | 3.48409178068932e-06
 | USP13 | ENSG00000058056 | 3 | 179370543 | 179507189 | 4.62 | 3.8374004399418e-06
 | AC005592.1 | ENSG00000236714 | 5 | 142125165 | 142140563 | 4.0 | 6.33424836662399e-05
 | UTF1 | ENSG00000171794 | 10 | 135043778 | 135045062 | 3.97 | 7.18726318057076e-05
 | METTL21C | ENSG00000139780 | 13 | 103338097 | 103346854 | 3.95 | 7.8151193195575e-05
 | KCNA7 | ENSG00000104848 | 19 | 49570675 | 49576198 | 3.92 | 8.85489686241414e-05
 | MYH6 | ENSG00000197616 | 14 | 23851199 | 23877486 | 4.31 | 1.63254546055261e-05
 | SMTNL2 | ENSG00000188176 | 17 | 4487294 | 4511614 | 4.3 | 1.70798109419836e-05
 | [NAME] | ENSG00000146147 | 6 | 53794780 | 54131078 | 4.24 | 2.23519786642411e-05
 | ZFP42 | ENSG00000179059 | 4 | 188916925 | 188926204 | 4.22 | 2.4430231850506e-05
 | PPP1R27 | ENSG00000182676 | 17 | 79791368 | 79792926 | 4.21 | 2.55370688274699e-05
 | PCDHB17 | ENSG00000255622 | 5 | 140535577 | 140538639 | 4.2 | 2.66914980318126e-05
 | AC126775.1 | ENSG00000248255 | 5 | 146939557 | 147041572 | 4.19 | 2.78954454537625e-05
 | RTN2 | ENSG00000125744 | 19 | 45988550 | 46000313 | 4.17 | 3.04599638959558e-05
 | HHATL | ENSG00000010282 | 3 | 42734155 | 42744319 | 4.12 | 3.78872399011065e-05
 | ITGB1BP2 | ENSG00000147166 | 23 | 70521584 | 70525221 | 4.11 | 3.95659117364481e-05
 | GDF3 | ENSG00000184344 | 12 | 7842378 | 7848372 | 4.09 | 4.31373188963611e-05
 | LIPI | ENSG00000188992 | 21 | 15481134 | 15583166 | 4.05 | 5.12176329480831e-05