Spreadsheet: 2701aeb7-5746-41c6-94de-1dd15818fc43
Sheet: SNPS_ACROSS_STUDIES_2ormore

SNPs | Phenotype focus for PAGE replication work | Other Previously Associated Phenotypes | PubMed ID References (NHGRI GWAS Catalog, [NAME] et all 2009, or PubMed) | ARIC | CHS | WHI | EAGLE | MEC | Number Studies Present | GENE
rs6548238 | Body Mass Index |  | 19079261 | X | X | X | X | X | 5 | TMEM18
rs17782313 | Body Mass Index |  | 19151714, 18454148, 19079261 | X | X | X | X | X | 5 | MC4R
rs10938397 | Body Mass Index |  | 19164386, 19910641, 19910938, 20061430, 20816195, 20843981 | X | X | X | X | X | 5 | GNPDA2
rs11084753 | Body Mass Index |  | 19910641, 19910938 | X | X | X | X | X | 5 | [NAME]
rs7498665 | Body Mass Index |  | 17228025, 19164386, 19910938, 20386550, 20725061 | X |  | X | X | X | 4 | SH2B1
rs10838738 | Body Mass Index |  | 19910641, 19910938 | X |  | X |  | X | 3 | MTCH2
rs2815752 | Body Mass Index |  | 19079261 | X |  | X |  | X | 3 | NEGR1
rs9939609 | Body Mass Index | Type 2 diabetes | 19396169, 17554300, 17434869, 17463249, 18159244, 19079261, 17658951 | X | X |  |  |  | 2 | FTO
rs3751812 | Body Mass Index |  | 17658951 |  |  | X | X |  | 2 | FTO
rs2228145 | C-reactive Protein |  | 20811626, 20661738, 20551110, 20197062, 20186139, 20031590, 20031577, 19967057, 19926672, 19713205, 19671870, 19567438, 19503017, 19356949, 19280716, 19249341, 19124510, 18853133, 18852330, 18852197, 18781131, 18439548, 17984249, 17898129, 17671508, 17357077 | X | X |  | X |  | 3 | IL6R
rs1800795 | C-reactive Protein |  | 15820616, 16544245, 16644865, 17003362, 17416766, 17623760, 17694420, 17916900, 17996468, 18041006, 18239642, 18257935, 18276608, 18321738, 18449426, 18458677, 18752089, 18992263, 19056105, 19106168, 19140096, 19267250, 19280716, 19330901, 19377912, 19387461, 19435922, 19452524, 19542902, 19592000, 19671870, 19833146, 19853505, 19876004, 20043205, 20044998, 20132806, 20149313, 20175976, 20176930, 20333461, 20361391, 20436380, 20459474, 20592333, 20622166 | X |  |  | X |  | 2 | IL6
rs780094 | C-reactive Protein,T2D, glucose levels | Hypertriglyceridemia, uric acid concentrations | 18008060, 18596051, 18678614, 19073768, 19241058, 19656773, 19861489, 19890391, 19937311, 20352598, 20574426, 20625834, 20628598, 20661421, 20693352, 20839289 | X |  |  | X | X | 3 | GCKR,GCKR
rs1333049 | Coronary Artery Disease | Type 2 Diabetes, Hypertension | 17554300, 17634449 | X | X | X | X |  | 4 | CDKN2A,CDKN2B
rs599839 | Coronary Artery Disease | LDL cholesterol, Total cholesterol | 18262040, 18193043, 18179892, 17634449, 18193044 | X | X | X |  | X | 4 | CELSR2,PSRC1
rs2144300 | [NAME] Disease | HDL cholesterol,Triglycerides | 18193043 | X | X | X | X | X | 5 | GALNT2
rs7412 | Coronary Vascular Disease,lipids |  | 16603077, 17658295, 18034366, 19262956, 19377787, 19541455, 19667110, 20031563, 20031582, 20406466, 20429872, 20663622, 20832063, 20847432 |  |  | X | X |  | 2 | APOE
rs16890979 | Gout | Serum urate, Serum uric acid | 18759275, 18834626, 19877038 | X | X |  |  |  | 2 | SLC2A9
rs2231142 | Gout | Serum urate, Serum uric acid | 18834626, 19503597 | X |  |  | X |  | 2 | ABCG2
rs174547 | HDL Cholesterol | Triglycerides, Total cholesterol, LDL cholesterol | 20037589, 19060906 | X | X | X | X | X | 5 | FADS1, FADS2, FADS3
rs2156552 | HDL Cholesterol |  | 18193044, 18193043 | X | X | X | X | X | 5 | [NAME]
rs2197089 | HDL Cholesterol | Triglyceride levels | 18193043 | X | X | X | X | X | 5 | LPL
rs28927680 | HDL Cholesterol | Triglycerides, Triglyceride/HDL ratio | 17463246, 18193044 | X | X | X | X | X | 5 | APOA1,APOC3,APOA4,APOA5,ZNF259,B
rs328 | HDL Cholesterol | Triglycerides | 18193044, 18193046, 17463246 | X | X | X | X | X | 5 | LPL
rs3890182 | HDL Cholesterol |  | 19773416 | X | X | X | X | X | 5 | ABCA1
rs6586891 | HDL Cholesterol | Type 2 diabetes | 17463246, 18193043 | X | X | X | X | X | 5 | LPL
rs2271293 | HDL Cholesterol |  | 19060906, 19060911 | X |  | X | X | X | 4 | LCAT
rs2338104 | HDL Cholesterol |  | 20385826, 20160193, 19951432,19060911, 19060910,19060906,19041386, 18852197,18193043 | X | X |  | X | X | 4 | MMAB/MVK
rs3135506 | HDL Cholesterol | Triglyceride levels | 18596051, 18660489, 19018513, 19057464, 19629056, 19910639, 20395964, 20406163, 20429872 | X | X |  | X | X | 4 | APOA1/C3/A4/A5
[NAME] | HDL Cholesterol | LDL cholesterol, Waist circumference | 18193043, 18454146, 19060910, 19359809 | X |  | X | X | X | 4 | CETP
rs7679 | HDL Cholesterol |  | 20385826, 20160193, 19951432,19060906 | X | X |  | X | X | 4 | PLTP
rs9989419 | HDL Cholesterol | ApoAI, Type 2 Diabetes | 18193043, 18179892, 20031538, 17463246 | X | X | X |  | X | 4 | CETP
rs1800961 | HDL Cholesterol | Type 2 Diabetes | 18660489, 19748811 | X |  |  | X | X | 3 | HNF4A
rs2967605 | HDL Cholesterol |  | 19060906 | X | X |  |  | X | 3 | ANGPTL4
[NAME] | HDL Cholesterol |  | 19802338, 19606474, 19435741, 19185284, 19060910, 19041386, 18852197, 18193043 |  |  | X | X | X | 3 | ABCA1
rs471364 | HDL Cholesterol |  | 20385826, 19951432,  19060906 | X |  |  | X | X | 3 | TTC39B
rs12596776 | HDL Cholesterol |  | 20370913 |  |  |  | X | X | 2 | CETP
[NAME] | HDL Cholesterol |  | 18078817 |  |  |  | X | X | 2 | CETP
rs964184 | [NAME], lipids | Triglycerides, Triglyceride levels | 19060906, 18193043 |  |  | X | X |  | 2 | APOA1, APOC3, APOA4, APOA5
[NAME] | Kidney |  | 19567477, 20124285 | X | X |  |  |  | 2 | MYH9
rs11206510 | [NAME] |  | 20576952, 20699424 | X | X | X | X | X | 5 | PCSK9
rs12654264 | [NAME] | Total cholesterol | 18193044 | X | X | X | X | X | 5 | HMGCR
rs16996148 | [NAME] | Triglycerides | 18193043, 18193044 | X | X | X | X | X | 5 | NCAN,CILP2
rs562338 | [NAME] | Total cholesterol, Type 2 Diabetes | 17463246, 18193043, 18262040, 18179892 | X | X | X | X | X | 5 | APOB
rs6511720 | [NAME] |  | 19060906, 18193043, 18193044 | X | X | X | X | X | 5 | LDLR
[NAME] | [NAME] |  | 19060906 | X | X | X | X | X | 5 | ABCG8
rs1501908 | [NAME] |  | 19060906 | X | X |  | X | X | 4 | TIMD4, HAVCR1
rs646776 | [NAME] | Myocardial infarction (early onset) | 19060911, 19198609, 18193044, 18262040, 19060910 | X |  | X | X | X | 4 | CELSR2,PSRC1,SORT1
rs693 | [NAME] | Triglycerides, Total cholesterol, ApoB | 18193044, 18193043, 19060910, 17463246, 19060911, 18262040 | X |  | X | X | X | 4 | APOB
[NAME] | [NAME] |  | 19951432, 19474294, 19060910, 19060906, 18439548 | X |  |  | X | X | 3 | HNF1A
rs754523 | [NAME] |  | 18193043 | X |  | X |  | X | 3 | APOB
rs2228671 | [NAME] |  | 18714375, 20810930 |  |  |  | X | X | 2 | LDLR
rs6102059 | [NAME] |  | 19060906 |  |  |  | X | X | 2 | MAFB
[NAME] | [NAME], lipids |  | 18193044 | X | X | X | X |  | 4 | PCSK9
rs4420638 | [NAME], lipids | Alzheimer's disease, Coronary Artery Disease, C-reactive protein, Sporadic late onset Alzheimer's disease, ApoB, Triglycerides, Total cholesterol | 18193044, 17474819, 17463246, 18262040, 18193043, 18802019, 18179892, 17975299, 19060906, 17998437, 19197348, 17554300, 19567438 | X | X | X | X |  | 4 | APOE, APOC1, APOC4, APOC2
rs2383208 | Myocardial infarction | Glioma, Type 2 diabetes | 20386740, 19578366, 19463184, 19401414, 19096518, 18852197, 18426861, 18224336 | X |  | X | X | X | 4 | CDKN2A/CDKN2B
rs10757278 | Myocardial infarction |  | 17478679 | X | X | X |  |  | 3 | CDKN2A,CDKN2B
rs2383207 | Myocardial infarction |  | 17478679 | X |  | X |  |  | 2 | CDKN2A,CDKN2B
rs8050136 | Obesity | Type 2 diabetes | 17554300, 19079260, 17463249, 17463248, 18372903, 18159244, 19056611, 17658951 | X |  | X |  | X | 3 | FTO
rs17145738 | Triglycerides | Bipolar disorder | 18193043, 18193044 | X | X | X | X | X | 5 | BCL7B,TBL2,MLXIPL
rs4775041 | Triglycerides | Serum metabolites, HDL cholesterol | 18193043, 17463246, 19043545 | X | X | X |  | X | 4 | LIPC
rs1260326 | Triglycerides, lipids | Type 2 diabetes, insulin levels, protein C | 18556336, 18678614, 18853134, 19526250, 19651812, 19847674, 20081857, 20352598, 20570915, 20802025 |  |  | X | X |  | 2 | GCKR,GCKR
rs1748195 | Triglycerides, lipids |  | 18193043 |  |  | X | X |  | 2 | ANGPTL3
rs2954029 | Triglycerides, lipids |  | 20160193, 19656773, 19060906 |  |  | X | X |  | 2 | TRIB1,TRIB1
rs10923931 | Type 2 Diabetes | Type I Diabetes | 18372903 | X | X | X | X | X | 5 | NOTCH2
rs1801282 | Type 2 Diabetes | Psoriatic arthritis, BMI, Breast Cancer, Inflammation, Coronary Artery Disease, Obesity, Bone Density, Alzheimer's, Cancer | 16713673, 16783862, 17094261, 17187763, 17348446, 17355643, 17903298, 18091023, 18160840, 18162508, 18280041, 18959602, 18972257, 18996470, 19002430, 19178525, 19228871, 19324937, 19455305, 19543210, 19634985, 19644638, 19660836, 19720797, 19733160, 19745552, 19846176, 20043145, 20079163, 20179158, 20424228, 20580778, 20596649 | X | X | X | X | X | 5 | PPARG
rs4607103 | Type 2 Diabetes |  | 18372903 | X | X | X | X | X | 5 | ADAMTS9
rs864745 | Type 2 Diabetes | Prostate Cancer | 18567820, 18714373, 19455301, 19741467, 19789630, 20018066, 20406958, 20927120 | X | X | X | X | X | 5 | JAZF1
rs10010131 | Type 2 Diabetes |  | 18040659, 18060660, 18853134, 18984664, 19330314, 20028947, 20361036, 20802253 | X | X | X |  | X | 4 | WFS1
rs12779790 | Type 2 Diabetes |  | 18567820, 18714373, 19247373, 19455301, 19741467, 19789630 | X | X | X |  | X | 4 | CDC123/CAMK1D
rs13266634 | Type 2 Diabetes |  | 17786204, 17928989, 17971426, 18162508, 18162509, 18210030, 18264689, 18324385, 18400535, 18437351, 18548167, 18598350, 18628523, 18633108, 18850084, 18991055, 19002430, 19033397, 19096518, 19108828, 19172244, 19258437, 19542200, 19590848, 19655390, 19741166, 19741467, 20138556, 20167458, 20351753, 20424228, 20509872, 20550665, 20554072, 20802253, 20809084, 20836749, 20839289 | X |  | X | X | X | 4 | SLC30A8
rs4402960 | Type 2 Diabetes |  | 17463249, 17463248, 17463246, 18372903, 19401414 | X | X | X |  | X | 4 | IGF2BP2
rs5219 | Type 2 Diabetes |  | 17463248, 17463246, 19056611 | X | X | X |  | X | 4 | KCNJ11
rs7578597 | Type 2 Diabetes |  | 18567820, 18714373, 19670153, 19741467, 19789630, 19862325 | X |  | X | X | X | 4 | THADA
rs7903146 | Type 2 Diabetes |  | 19734900, 17668382, 17463246, 17463248, 18372903, 17293876, 17460697, 19056611, 19401414 | X |  | X | X | X | 4 | TCF7L2
rs7961581 | Type 2 Diabetes |  | 18372903 | X | X |  | X | X | 4 | TSPAN8/LGR5
rs10811661 | Type 2 Diabetes | Myocardial Infarction, Arterial Diseases | 17827400, 17928989, 18162508, 18176561, 18264689, 18368387, 18437351, 18461161, 18477659, 18598350, 18633108, 18991055, 19002430, 19019192, 19033397, 19258437, 19324937, 19463184, 19741467, 20018066, 20043145, 20161779, 20403154, 20424228, 20509872, 20802253 | X | X | X |  |  | 3 | CDKN2A/CDKN2B
rs1111875 | Type 2 Diabetes |  | 19401414, 17293876, 17463249, 17463248, 17463246, 17460697 | X |  | X |  | X | 3 | [NAME]
rs10946398 | Type 2 Diabetes |  | 19741467, 20161779, 20424228, 20509872, 20550665, 20568056 | X | X |  |  |  | 2 | CDKAL1
[NAME] | Type 2 Diabetes |  | 19308350, 19556355, 19850681, 20606385 |  |  |  | X | X | 2 | KCNQ1
rs2237895 | Type 2 Diabetes | Asthma, Cardiac Contractions, Lipid Metabolism | 18711366, 19308350, 9366866, 19448982, 9516902, 19556355, 9575309, 19584308, 20174558, 20701788 |  |  |  | X | X | 2 | KCNQ1
rs4712523 | Type 2 Diabetes |  | 19401414, 19096518, 19008344, 18852197, 18426861 |  |  | X | X |  | 2 | CDKAL1
rs5215 | Type 2 Diabetes |  | 16733889, 19002430, 20043145, 20802253 | X |  | X |  |  | 2 | KCNJ11
rs7901695 | Type 2 Diabetes |  | 17554300, 17463249, 17463246, 17668382 | X |  | X |  |  | 2 | TCF7L2