Spreadsheet: 7a081fa4-93e9-492e-a11e-edc65eecd1be
Sheet: Sheet1

Table S5. Percent of representation of 9 Functional GO categories shown in Figure 5C (Dataset based on TAIR 8) | Unnamed: 1 | Unnamed: 2 | Unnamed: 3 | Unnamed: 4 | Unnamed: 5 | Unnamed: 6 | Unnamed: 7
Percent of the 9 GO Categories in the Genome
Function | Category | GO ID | No. of genes in the genome | No. of category genes in the genome | % of category genes in the genome
Biological Function | Developmental processes | GO:0007275 | 28244 | 2309 | 8.180980725623582
 | Transcription | GO:0006350 |  | 2178 | 7.716836734693877
 | Cell organization and biogenesis | GO:0016043 |  | 1667 | 5.906320861678005
Molecular Function | DNA or [NAME] binding | GO:0003677,  GO:0003723 | 28244 | 3635 | 12.87910997732426
 | Transcription factor activity | GO:0003700 |  | 2200 | 7.794784580498866
 | Kinase activity | GO:0016301 |  | 1676 | 5.938208616780045
Cellular Function | Nucleus | GO:0005634 | 28244 | 3599 | 12.7515589569161
 | [NAME] | GO:0005829 |  | 1063 | 3.766298185941043
 | Chloroplast | GO:0009507 |  | 4028 | 14.27154195011338
Percent of GO Cateogry Genes in the 7751 K27 Genes
Function | Category | GO ID | No. of genes in the genome | No. of genes in K27 (7751) | Ratio(log) | p-value | % of K27 genes
Biological Function | Developmental processes | GO:0007275 | 2309 | 491 | -0.3679831792711012 | 4.890912525989982e-10 | 6.33
 | Transcription | GO:0006350 | 2178 | 676 | 0.1775812617535984 | 0.0001122890494682963 | 8.721455296090827
 | Cell organization and biogenesis | GO:0016043 | 1667 | 234 | -0.9671836052146914 | 0 | 3.018965294800671
Molecular Function | DNA or [NAME] binding | GO:0003677,  GO:0003723 | 3635 | 541 | -0.8827648007918206 | 0 | 6.97974454909044
 | Transcription factor activity | GO:0003700 | 2200 | 735 | 0.2838026955000258 | 2.383910367931304e-08 | 9.482647400335441
 | Kinase activity | GO:0016301 | 1676 | 247 | -0.8969491379263528 | 0 | 3.186685588956264
Cellular Function | Nucleus | GO:0005634 | 3599 | 606 | -0.7047163392634557 | 0 | 7.818346019868404
 | [NAME] | GO:0005829 | 1063 | 79 | -1.884655069165681 | 0 | 1.019223326022449
 | Chloroplast | GO:0009507 | 4028 | 378 | -1.548115479597391 | 0 | 4.876790091601084
Percent of GO Category Genes in the 3230 EMF1_K27 Genes
Function | Category | GO ID | No. of genes in the genome | No. of genes in EMF1_K27 (3230) | Ratio(log) | p-value | % of EMF1_K27 genes
Biological Function | Developmental processes | GO:0007275 | 2309 | 306 | 0.2126737367644415 | 0.0009602565814269133 | 9.473684210526317
 | Transcription | GO:0006350 | 2178 | 436 | 0.8077344379059244 | 0 | 13.4984520123839
 | Cell organization and biogenesis | GO:0016043 | 1667 | 115 | -0.7292099861961365 | 9.220047574116565e-10 | 3.560371517027864
Molecular Function | DNA or [NAME] binding | GO:0003677,  GO:0003723 | 3635 | 332 | -0.3243618656141269 | 2.551812624162668e-06 | 10.27863777089783
 | Transcription factor activity | GO:0003700 | 2200 | 516 | 1.036277798857137 | 0 | 15.97523219814241
 | Kinase activity | GO:0016301 | 1676 | 61 | -1.65173074429056 | 0 | 1.888544891640867
Cellular Function | Nucleus | GO:0005634 | 3599 | 393 | -0.06665653282021607 | 0.01314046373902094 | 12.1671826625387
 | [NAME] | GO:0005829 | 1063 | 54 | -1.170700027521731 | 2.637944527253699e-12 | 1.671826625386997
 | Chloroplast | GO:0009507 | 4028 | 192 | -1.262547115439723 | 0 | 5.944272445820433
Percent of GO Category Genes in the 1845 Group I Genes
Function | Category | GO ID | No. of gene in the genome | No. of gene in Group I (1845) | Ratio(log) | p-value | % of Group I gene
Biological Function | Developmental processes | GO:0007275 | 2309 | 223 | 0.5640991426256233 | 7.959162058942874e-09 | 12.08672086720867
 | Ttranscription | GO:0006350 | 2178 | 306 | 1.104851304455179 | 0 | 16.58536585365854
 | Cell organization and biogenesis | GO:0016043 | 1667 | 59 | -0.8841436391451415 | 5.611197661781906e-08 | 3.197831978319783
Molecular Function | DNA or [NAME] binding | GO:0003677,  GO:0003723 | 3635 | 231 | -0.03973890691146509 | 0.0240180241116982 | 12.52032520325203
 | Transcription factor activity | GO:0003700 | 2200 | 368 | 1.356525848124425 | 0 | 19.94579945799458
 | Kinase activity | GO:0016301 | 1676 | 30 | -1.867664137611399 | 0 | 1.626016260162602
Cellular Function | Nucleus | GO:0005634 | 3599 | 283 | 0.2675295563865885 | 0.0002434994514207873 | 15.33875338753388
 | [NAME] | GO:0005829 | 1063 | 32 | -1.117674181051671 | 2.260296111934125e-07 | 1.734417344173442
 | Chloroplast | GO:0009507 | 4028 | 86 | -1.613331512825253 | 0 | 4.661246612466124
Percent of GO Category Genes in the 1385 Group II Genes
Function | Category | GO ID | No. of gene in the Genome | No. of genes in Group II (1385) | Ratio(log) | p-value | % of Group II gene
Biological Function | Developmental processes | GO:0007275 | 2309 | 83 | -0.4480264859365487 | 0.0005104574480538633 | 5.992779783393502
 | Ttranscription | GO:0006350 | 2178 | 130 | 0.2835661148021892 | 0.003320133131616064 | 9.386281588447654
 | Cell organization and biogenesis | GO:0016043 | 1667 | 56 | -0.545696926438171 | 0.000555402896489873 | 4.043321299638989
Molecular Function | DNA or [NAME] binding | GO:0003677,  GO:0003723 | 3635 | 101 | -0.8195416255645206 | 9.263751843295716e-11 | 7.292418772563177
 | Transcription factor activity | GO:0003700 | 2200 | 148 | 0.4561520977075695 | 4.132067232537792e-05 | 10.68592057761733
 | Kinase activity | GO:0016301 | 1676 | 31 | -1.406623582821835 | 5.633760152018169e-11 | 2.23826714801444
Cellular Function | Nucleus | GO:0005634 | 3599 | 110 | -0.6820341329094265 | 1.952706652896208e-08 | 7.942238267148015
 | [NAME] | GO:0005829 | 1063 | 22 | -1.244507722403166 | 1.219895607492879e-06 | 1.588447653429603
 | Chloroplast | GO:0009507 | 4028 | 106 | -0.897940972952944 | 3.115000985036802e-13 | 7.653429602888087
Percent of GO Category Genes in the 2303 EMF1_no_K27 Genes
Function | Category | GO ID | No. of genes in the genome | No. of genes in EMF1_no_K27 (2303) | Ratio(log) | p-value | % of EMF_no_K27 genes
Biological Function | Developmental processes | GO:0007275 | 2309 | 181 | -0.05684846505656328 | 0.02570599356775639 | 7.859313938341295
 | Ttranscription | GO:0006350 | 2178 | 191 | 0.1049986949531884 | 0.01760961596913164 | 8.293530178028659
 | Cell organization and biogenesis | GO:0016043 | 1667 | 108 | -0.3317927811886017 | 0.001748402710186953 | 4.689535388623534
Molecular Function | DNA or [NAME] binding | GO:0003677,  GO:0003723 | 3635 | 267 | -0.150685611485056 | 0.005400219063345918 | 11.59357359965263
 | Transcription factor activity | GO:0003700 | 2200 | 216 | 0.2679577993857933 | 0.0008150006296110214 | 9.379070777247069
 | Kinase activity | GO:0016301 | 1676 | 126 | -0.1171684045650882 | 0.02317312554756058 | 5.47112462006079
Cellular Function | Nucleus | GO:0005634 | 3599 | 312 | 0.08837993757186743 | 0.01272261682800248 | 13.54754667824577
 | [NAME] | GO:0005829 | 1063 | 98 | 0.1771420682184502 | 0.01980777135569841 | 4.25531914893617
 | Chloroplast | GO:0009507 | 4028 | 392 | 0.2552199817427701 | 6.174987191870296e-05 | 17.02127659574468