Spreadsheet: 71c4ac66-2eb4-4ead-ad7f-ac357fee639a
Sheet: Sheet1

Supplementary Table 5: Breakdown of gene expression patterns at E14.5 for genes bound and regulated by Pax6 | Unnamed: 1 | Unnamed: 2 | Unnamed: 3 | Unnamed: 4 | Unnamed: 5
In situ hybridisation images for each gene were extracted from the GenePaint database (GenePaint.org) and scored by two independent observers for expression in each of four compartments (VZ, SVZ, lower & upper CP).
[NAME] | Upper Cortical Plate | Lower Cortical Plate | SVZ | VZ | Speckled
0610037P05Rik | 1 |  | 1
1110059P08Rik | 1 |  |  |  | 1
1110061O04Rik |  |  |  |  | 1
1110067D22Rik | 1 |  |  | 1
1810003N24Rik | 1 |  |  | 1 | 1
2010321M09Rik |  |  |  | 1 | 1
2210412D01Rik | 1
2410104I19Rik |  |  | 1 | 1
2510048O06Rik | 1 |  |  | 1
2610510H03Rik |  |  |  | 1
2610524G07Rik |  |  |  | 1 | 1
2700007P21Rik |  |  |  | 1 | 1
2700060E02Rik | 1 |  |  | 1
2700085M18Rik | 1 |  |  | 1
2900001O04Rik | 1 | 1 | 1 | 1
2900024O10Rik |  |  |  | 1 | 1
3230401D17Rik |  |  |  | 1
4833426J09Rik |  |  |  |  | 1
5830415L20Rik |  |  |  | 1
6230410P16Rik |  |  |  |  | 1
8430437G11Rik |  |  |  | 1
A130010J15Rik | 1 |  |  | 1 | 1
Abat | 1 |  | 1
Add2 | 1
Ankrd17 | 1 | 1 | 1 | 1
Arhgdib | 1 | 1 | 1 | 1
Arl6ip5 | 1 | 1 | 1 | 1
Arpc5 | 1 | 1
Atp1b1 | 1
Atp6v1f | 1 |  |  |  | 1
Aurkb |  |  | 1 | 1 | 1
AW125753 | 1
Bai3 | 1 |  |  |  | 1
BC018242 | 1
BC021608 |  |  |  | 1 | 1
BC035295 | 1 | 1 | 1 | 1
BC057627 | 1 | 1 | 1 | 1
Bcan |  |  |  | 1
[NAME] | 1 | 1 | 1 | 1
Bex2 | 1 |  |  | 1 | 1
Bicd2 |  |  |  | 1 | 1
[NAME] |  |  |  |  | 1
Bnip3l |  |  |  | 1 | 1
Bsg | 1 |  |  | 1
Bxdc1 | 1 |  |  | 1
C80913 |  |  | 1
Cd9 |  |  |  | 1
Cdc42se1 |  |  |  |  | 1
Cdca2 |  |  |  | 1
Cdca7 | 1 |  |  | 1
Cdk4 | 1 | 1 | 1 | 1
Clk3 | 1 | 1 | 1 | 1
Cln8 |  |  |  |  | 1
Clns1a |  |  |  | 1 | 1
Cnot6l | 1 |  |  | 1
Col2a1 |  | 1 |  | 1
Cova1 |  |  |  | 1
Crsp9 | 1 | 1 |  | 1
Cryzl1 | 1 |  |  | 1
Csda | 1 |  |  | 1
Ctnnbl1 |  |  |  | 1
Cuedc2 | 1 | 1 | 1 | 1
Cul1 |  |  | 1 | 1 | 1
Cutl1 |  |  |  | 1 | 1
Ddx46 |  |  |  | 1 | 1
Efna5 | 1 |  |  | 1
Eif3s8 | 1 |  |  | 1
Enpp2 | 1 |  |  | 1
Eomes |  |  | 1 | 1
Epha7 | 1 |  | 1 | 1
Etv1 |  |  |  | 1 | 1
Fancl |  |  |  | 1
Fbxo38 |  |  |  |  | 1
Fgfr1 | 1 |  |  | 1
Fn1 |  |  |  | 1
Fth1 | 1 |  |  | 1
Gab1 |  |  |  | 1 | 1
[NAME] |  |  |  | 1
Galnt7 |  | 1 |  |  | 1
Gap43 | 1
[NAME] |  |  |  | 1
Gmppb | 1 | 1 | 1 | 1
Gmps | 1 |  |  | 1
Gpr85 | 1 | 1
Gtpbp1 |  |  | 1 | 1
H3f3b |  |  |  | 1
Hbld2 | 1 | 1 | 1 | 1
Hdgf |  |  |  | 1 | 1
Hmga2 |  |  |  | 1
[NAME] |  |  | 1
Hras1 |  |  |  | 1
Iars |  |  |  | 1
Idh1 | 1 | 1 |  | 1
Idh3a | 1 |  |  | 1
Igsf11 |  |  |  | 1
Ing4 | 1 | 1 | 1 | 1
Isl1 | 1 |  | 1 | 1
Itgb4bp |  |  |  | 1 | 1
Jarid2 | 1 |  | 1
Kbtbd4 | 1 |  |  | 1
Kctd6 | 1 |  |  | 1 | 1
Klhl5 |  |  |  | 1
Leng8 |  |  | 1 | 1
Lix1 | 1 |  |  | 1
Lsm3 |  |  |  | 1
Mak3 |  |  |  | 1 | 1
[NAME] | 1 |  |  | 1
Mcm3 |  |  |  | 1 | 1
Mcm3ap |  |  |  | 1
Me2 | 1 |  |  | 1
Mest |  |  |  | 1
Mga | 1 |  |  | 1
Mlf2 | 1 |  |  | 1
Mocs2 | 1 |  |  | 1
Mrpl15 | 1 |  |  | 1
[NAME] |  |  |  | 1
Mrps2 | 1 |  |  | 1
Mrps31 |  |  |  | 1
[NAME] |  |  |  | 1 | 1
Mtch2 | 1 |  |  | 1 | 1
Mtrr | 1 | 1 | 1 | 1 | 1
Mtx1 |  |  |  | 1
Ncdn | 1 |  |  |  | 1
Nckap1 | 1 |  | 1 |  | 1
Ncoa6ip |  |  |  | 1 | 1
[NAME] | 1
Nedd4 | 1 |  |  | 1
Nedd9 |  |  |  | 1
Nell2 | 1
[NAME] |  |  | 1
Nfya | 1 |  | 1 |  | 1
Nipsnap3a | 1 |  |  |  | 1
Nkiras2 | 1 | 1 | 1 | 1 | 1
Nolc1 | 1 |  |  | 1
Ntrk2 | 1 |  |  | 1
Nup50 |  |  |  | 1 | 1
Nutf2 |  | 1 |  | 1 | 1
Ogdh | 1 |  |  | 1
Ogt | 1 | 1 |  | 1 | 1
Oprs1 |  |  |  | 1
Pacsin3 |  |  |  | 1
Pafah1b3 | 1 | 1 | 1 | 1
Pak3 | 1 |  |  | 1
Pcsk1n | 1
Pde6d |  |  | 1 | 1 | 1
[NAME] | 1 | 1 | 1 | 1
Pex3 | 1 |  |  | 1 | 1
Pgrmc1 | 1 |  |  | 1
Phf10 | 1 |  |  | 1
Pkm2 | 1 | 1 | 1 | 1
Polr2k | 1 | 1 | 1 | 1
Polr3k | 1 |  |  | 1 | 1
Ppm1g | 1 |  |  | 1
Psmb4 |  |  |  |  | 1
Pten | 1 | 1 | 1 | 1 | 1
[NAME] | 1 | 1
Rad23b | 1 |  |  | 1
Rae1 | 1 |  |  | 1
Rai14 |  |  |  | 1
Rala | 1 |  |  | 1 | 1
Ran |  |  | 1 | 1
Rbbp7 |  |  | 1 | 1
Rcl1 | 1 |  |  | 1
Rdx |  |  |  | 1
Recql |  |  | 1
Rhag | 1 |  | 1
Rhob |  |  |  |  | 1
[NAME] |  |  |  | 1
Rod1 |  |  | 1 |  | 1
Rpl10a | 1 | 1 | 1 | 1
[NAME] |  |  |  | 1
Rpl37a |  |  |  | 1
Rps11 | 1 | 1 | 1 | 1
[NAME] |  |  |  | 1
Rps20 | 1 | 1 | 1 | 1
Rps27 | 1 | 1 | 1 | 1
Rps9 | 1 | 1 | 1 | 1 | 1
Rtn3 | 1 |  |  | 1
Scn3b | 1
Sec61a1 | 1 |  |  | 1
Serpinh1 |  |  |  | 1
Sertad2 |  |  |  | 1 | 1
Sesn1 |  | 1
Sfrs9 |  |  |  | 1
Siva |  |  |  | 1
Slc35b3 | 1 |  |  | 1 | 1
Slc39a6 | 1 |  |  | 1
Smad4 | 1 |  |  | 1
Snip1 | 1 |  | 1 | 1 | 1
Sorbs1 | 1
Spag5 |  |  | 1
Spnb2 | 1 | 1 |  | 1
Spred2 | 1 |  |  | 1
Srpk1 |  |  |  | 1
Stat1 |  |  |  |  | 1
Stat3 |  |  | 1 | 1
Statip1 | 1 | 1 | 1 | 1 | 1
Suclg1 | 1 |  |  | 1
Sugt1 |  |  |  |  | 1
Taf9 |  |  |  | 1
Tbl1x |  |  |  | 1
Tcp1 | 1 | 1 | 1 | 1
Tfg | 1 |  |  | 1
Tgif |  |  |  | 1 | 1
Tk1 | 1 |  | 1 | 1
Tle1 | 1 | 1 |  | 1
Tm9sf2 |  |  | 1
[NAME] | 1 | 1 | 1 | 1 | 1
Tmsb4x | 1 | 1 | 1 | 1
Top1 | 1 |  |  | 1 | 1
Top2a |  |  |  | 1
Tubgcp2 | 1 |  |  | 1 | 1
Tyrobp
Ubtf | 1 | 1 | 1 | 1 | 1
Usp39 | 1 | 1 | 1 | 1 | 1
Vcp | 1 | 1 | 1 | 1
Vegfc |  |  |  | 1
Wdr1 | 1 |  | 1 | 1
Wdr3 |  |  |  | 1
Wdr34 | 1 |  |  | 1
Ywhaq | 1 | 1 | 1 | 1
Zdhhc13 |  |  |  |  | 1
Zfp281 |  |  |  |  | 1