Spreadsheet: cb97d64a-b0e2-48f8-9905-a86e81060d6c
Sheet: Sheet1

# [NAME] | Unnamed: 1 | Unnamed: 2
## [NAME]
### Proteobacteria
#### [NAME]/enterobacteria
[NAME] | E.coli | Escherichia coli K-12 MG1655
ece | E.coli_O157 | Escherichia coli O157 EDL933 (EHEC)
ecs | E.coli_O157J | Escherichia coli O157 Sakai (EHEC)
sty | S.typhi | Salmonella enterica subsp. enterica serovar Typhi CT18
stt | S.typhi_Ty2 | Salmonella enterica subsp. enterica serovar Typhi Ty2
stm | S.typhimurium | Salmonella typhimurium LT2
ype | Y.pestis | Yersinia pestis CO92
ypk | Y.pestis_KIM | Yersinia pestis [NAME]
ypm | Y.pestis_Mediaevails | Yersinia pestis Mediaevails
sfl | S.flexneri | Shigella flexneri 301 (serotype 2a)
sfx | S.flexneri_2457T | Shigella flexneri 2457T (serotype 2a)
plu | P.luminescens | Photorhabdus luminescens
buc | Buchnera | [NAME]
bas | B.aphidicola_Sg | [NAME]
bab | B.aphidicola_Bp | Buchnera aphidicola Bp
wbr | W.brevipalpis | Wigglesworthia glossinidia
bfl | B.floridanus | Candidatus Blochmannia floridanus
#### [NAME]/others
hin | H.influenzae | Haemophilus influenzae Rd KW20 (serotype d)
[NAME] | H.ducreyi | Haemophilus ducreyi
pmu | P.multocida | Pasteurella multocida
xfa | X.fastidiosa | Xylella fastidiosa 9a5c
xft | X.fastidiosa_T | Xylella fastidiosa Temecula1
xcc | X.campestris | [NAME] campestris pv. [NAME] ATCC 33913
xac | X.axonopodis | [NAME] axonopodis
vch | V.cholerae | Vibrio cholerae O1
vvu | V.vulnificus | Vibrio vulnificus CMCP6
vvy | V.vulnificus_YJ016 | [NAME] vulnificus YJ016
[NAME] | V.parahaemolyticus | [NAME] parahaemolyticus
ppr | P.profundum | Photobacterium profundum
pae | P.aeruginosa | Pseudomonas aeruginosa PAO1
ppu | P.putida | Pseudomonas putida KT2440
pst | P.syringae | Pseudomonas syringae pv. [NAME] DC3000
son | S.oneidensis | Shewanella oneidensis
cbu | C.burnetii | Coxiella burnetii RSA 493
#### Beta
nme | N.meningitidis | Neisseria meningitidis MC58 (serogroup B)
nma | N.meningitidis_A | Neisseria meningitidis Z2491 (serogroup A)
cvi | C.violaceum | Chromobacterium violaceum
rso | R.solanacearum | Ralstonia solanacearum
bpe | B.pertussis | Bordetella pertussis
bpa | B.parapertussis | Bordetella parapertussis
bbr | B.bronchiseptica | Bordetella bronchiseptica
neu | N.europaea | Nitrosomonas europaea
#### Epsilon
hpy | H.pylori | Helicobacter pylori 26695
hpj | H.pylori_J99 | Helicobacter pylori J99
hhe | H.hepaticus | Helicobacter hepaticus
wsu | W.succinogenes | Wolinella succinogenes
[NAME] | C.jejuni_RM1221 | Campylobacter jejuni RM1221
#### Delta
gsu | G.sulfurreducens | Geobacter sulfurreducens
dvu | D.vulgaris | Desulfovibrio vulgaris Hildenborough
bba | B.bacteriovorus | Bdellovibrio bacteriovorus
#### [NAME]/rickettsias
rpr | R.prowazekii | Rickettsia prowazekii
rco | R.conorii | Rickettsia conorii
wol | Wolbachia_Mel | Wolbachia wMel
#### [NAME]/rhizobacteria
mlo | M.loti | Mesorhizobium loti
sme | [NAME] | Sinorhizobium meliloti
atu | A.tumefaciens | Agrobacterium tumefaciens C58 (UWash/Dupont)
bme | B.melitensis | Brucella melitensis 16M
bms | B.suis | Brucella suis 1330
bja | B.japonicum | Bradyrhizobium japonicum
rpa | R.palustris | Rhodopseudomonas palustris CGA009
#### [NAME]/others
ccr | C.crescentus | Caulobacter crescentus
### Firmicutes
#### Bacillales
bsu | B.subtilis | Bacillus subtilis
bha | B.halodurans | Bacillus halodurans
ban | B.anthracis | Bacillus anthracis Ames
bce | B.cereus | Bacillus cereus ATCC 14579
bca | B.cereus_ATCC10987 | Bacillus cereus ATCC 10987
oih | O.iheyensis | Oceanobacillus iheyensis
sau | S.aureus_N315 | Staphylococcus aureus N315
sav | S.aureus_Mu50 | Staphylococcus aureus Mu50
[NAME] | S.aureus_MW2 | Staphylococcus aureus MW2
ser | S.epidermidis_RP62A | Staphylococcus epidermidis RP62A
lmo | L.monocytogenes | [NAME] monocytogenes EGD-e
[NAME] | L.monocytogenes_F2365 | [NAME] monocytogenes F2365
[NAME] | L.innocua | [NAME] innocua
#### Lactobacillales
lla | L.lactis | Lactococcus lactis subsp. lactis IL1403
spy | S.pyogenes | Streptococcus pyogenes SF370 (serotype M1)
spm | S.pyogenes_M18 | Streptococcus pyogenes MGAS8232 (serotype M18)
spg | S.pyogenes_M3 | Streptococcus pyogenes MGAS315 (serotype M3)
sps | S.pyogenes_SSI1 | Streptococcus pyogenes SSI-1 (serotype M3)
spn | S.pneumoniae | Streptococcus pneumoniae TIGR4
spr | S.pneumoniae_R6 | Streptococcus pneumoniae R6
[NAME] | S.agalactiae | Streptococcus agalactiae 2603 (serotype V)
san | S.agalactiae_NEM316 | [NAME] (serotype III)
smu | S.mutans | Streptococcus mutans
lpl | L.plantarum | Lactobacillus plantarum
ljo | L.johnsonii | Lactobacillus johnsonii
efa | E.faecalis | Enterococcus faecalis
#### [NAME]
cac | C.acetobutylicum | Clostridium acetobutylicum
cpe | C.perfringens | Clostridium perfringens 13
ctc | C.tetani | Clostridium tetani E88
[NAME] | T.tengcongensis | Thermoanaerobacter tengcongensis
### Tenericutes
#### Mollicutes
mge | M.genitalium | Mycoplasma genitalium
[NAME] | M.pneumoniae | Mycoplasma pneumoniae
mpu | M.pulmonis | Mycoplasma pulmonis
mpe | M.penetrans | Mycoplasma penetrans
mga | M.gallisepticum | Mycoplasma gallisepticum
mmy | M.mycoides | Mycoplasma mycoides
mmo | M.mobile | Mycoplasma mobile
poy | Phytoplasma_OY | Phytoplasma OY
### Actinobacteria
mtu | M.tuberculosis | Mycobacterium tuberculosis H37Rv
[NAME] | M.tuberculosis_CDC1551 | Mycobacterium tuberculosis CDC1551
mbo | M.bovis | Mycobacterium bovis AF2122/97
mle | M.leprae | Mycobacterium leprae
mpa | M.avium_paratuberculosis | Mycobacterium avium paratuberculosis
cgl | C.glutamicum | Corynebacterium glutamicum ATCC 13032 (Kyowa Hakko)
cef | C.efficiens | Corynebacterium efficiens
cdi | C.diphtheriae | Corynebacterium diphtheriae
[NAME] | S.coelicolor | Streptomyces coelicolor
sma | S.avermitilis | Streptomyces avermitilis
twh | T.whipplei | Tropheryma whipplei Twist
tws | T.whipplei_S | Tropheryma whipplei TW08/27
blo | B.longum | Bifidobacterium longum NCC2705
### Fusobacteria
fnu | F.nucleatum | Fusobacterium nucleatum
### Planctomyces
rba | R.baltica | [NAME]
### Chlamydia
ctr | C.trachomatis | Chlamydia trachomatis D/UW-3/CX (serovar D)
cmu | C.muridarum | Chlamydia muridarum
cpn | C.pneumoniae | Chlamydophila pneumoniae CWL029
cpa | [NAME] | Chlamydophila pneumoniae AR39
cpj | C.pneumoniae_J138 | Chlamydophila pneumoniae [NAME]
cpt | C.pneumoniae_TW183 | Chlamydophila pneumoniae TW183
cca | C.caviae | Chlamydophila caviae
### Spirochete
bbu | B.burgdorferi | Borrelia burgdorferi
tpa | T.pallidum | Treponema pallidum subsp. pallidum [NAME]
tde | T.denticola | Treponema denticola
lil | L.interrogans | Leptospira interrogans [NAME]
lic | L.interrogans_Copenhageni | Leptospira interrogans serovar [NAME]
### Cyanobacteria
[NAME] | Synechocystis | Synechocystis sp. [NAME]
syw | Synechococcus_WH8102 | Synechococcus sp. WH8102
syf | Synechococcus_PCC7942 | Synechococcus elongatus PCC7942
gvi | G.violaceus | Gloeobacter violaceus
ana | Anabaena | Anabaena sp. PCC7120
pmm | P.marinus_MED4 | Prochlorococcus marinus MED4
pmt | P.marinus_MIT9313 | Prochlorococcus marinus MIT9313
pmn | [NAME] | Prochlorococcus marinus NATL2A
### Bacteroides
bth | B.thetaiotaomicron | Bacteroides thetaiotaomicron
pgi | P.gingivalis | Porphyromonas gingivalis W83
### Green sulfur bacteria
cte | C.tepidum | Chlorobaculum tepidum
### Green nonsulfur bacteria
[NAME] | D.ethenogenes | Dehalococcoides ethenogenes
### Deinococcus-Thermus
dra | D.radiodurans | Deinococcus radiodurans
tth | T.thermophilus | [NAME] thermophilus HB27
### [NAME] bacteria
aae | A.aeolicus | Aquifex aeolicus
tma | T.maritima | Thermotoga maritima
## [NAME]
### Euryarchaeota
[NAME] | M.jannaschii | Methanococcus jannaschii
mmp | M.maripaludis | Methanococcus maripaludis S2
mac | M.acetivorans | Methanosarcina acetivorans
mma | M.mazei | Methanosarcina mazei
mth | M.thermoautotrophicum | Methanobacterium thermoautotrophicum
mka | M.kandleri | Methanopyrus kandleri
[NAME] | A.fulgidus | Archaeoglobus fulgidus
hal | Halobacterium | Halobacterium sp. NRC-1
tac | T.acidophilum | Thermoplasma acidophilum
[NAME] | T.volcanium | Thermoplasma volcanium
pho | P.horikoshii | Pyrococcus horikoshii
pab | P.abyssi | Pyrococcus abyssi
pfu | P.furiosus | Pyrococcus furiosus
### Crenarchaeota
ape | A.pernix | Aeropyrum pernix
sso | S.solfataricus | Sulfolobus solfataricus
sto | S.tokodaii | Sulfolobus tokodaii
pai | P.aerophilum | Pyrobaculum aerophilum
### [NAME]
neq | N.equitans | Nanoarchaeum equitans