Spreadsheet: 61efad7c-d2d8-4735-a8b2-4b4c5292b820
Sheet: Sheet1

Table S3. Genetic markers in AR182. | Unnamed: 1 | Unnamed: 2 | Unnamed: 3 | Unnamed: 4 | Unnamed: 5 | Unnamed: 6 | Unnamed: 7
Marker | [NAME] | Bin | Original Map | Physical Contig | Genes and Notes | Start | End
his2b5 | 373.03 | 4.06 | Genetic 2008 4 | 182 | histone 2B5 | 1201502 | 1202179
umc2070 | 373.03 | 4.06 | IBM2 FPC0507 4 | 182 |  | 1313730 | 1314249
umc1869 | 373.04 | 4.06 | IBM2 FPC0507 4 | 182 |  | 1747933 | 1748076
tola1 | 373.07 | 4.06 | Genetic 2008 4 | 182 | similar to ATP synthase alpha chain, mitochondral homology, | 2797229 | 2798317
aldh2 | 373.11 | 4.06 | Genetic 2008 4 | 182 | rf2b | 5989469 | 5985299
gln5 | 373.15 | 4.06 | Genetic 2008 4 | 182 | glutamine synthetase | 7108545 | 7111679
rz567b(klc) | 373.3 | 4.06 | IBM2 4 | 182 | [NAME] chain-related | 826422 | 826231
[NAME] | 373.52 | 4.06 | UMC 98 4 | 182 |  | 31370 | 32436
csu587a | 373.52 | 4.06 | UMC 98 4 | 181
IDP1684 | 373.7 | 4.06 | cIBM2006 4 | 181
[NAME] | 373.7 | 4.06 | cIBM2006 4 | 181
IDP8254 | 373.77 | 4.06 | ISU IBM Map7 4 |  | Wrong, in Chr2 AC194093
IDP1989 | 373.77 | 4.06 | cIBM2006 4 | 181
TIDP5716 | 373.77 | 4.06 | ISU IBM Map7 4 | 181
IDP8534 | 373.77 | 4.06 | ISU IBM Map7 4 | 181
TIDP2971 | 374.84 | 4.06 | ISU IBM Map7 4 | 181
pza01926 | 375.02 | 4.06 | NAM 4 | 181
IDP2349 | 375.91 | 4.06 | cIBM2006 4 | 181
TIDP3018 | 376.38 | 4.06 | ISU IBM Map7 4 | 181
TIDP7090 | 376.38 | 4.06 | ISU IBM Map7 4 | 181
IDP600 | 378.69 | 4.06 | cIBM2006 4 | 181
IDP799 | 379.05 | 4.06 | cIBM2006 4 | 181
IDP7372 | 379.05 | 4.06 | ISU IBM Map7 4 | 181
IDP8298 | 379.05 | 4.06 | ISU IBM Map7 4 | 181
ant2 | 379.3 | 4.06 | IBM2 4 | 182 | adenine nucleotide [NAME] | 3922541 | 3923932
IDP308 | 379.48 | 4.06 | cIBM2006 4 | 181
IDP4270 | 380.46 | 4.06 | ISU IBM Map7 4 | 182 |  | 57604 | 58383
IDP8386 | 380.46 | 4.06 | ISU IBM Map7 4 | 181
IDP8602 | 380.83 | 4.06 | ISU IBM Map7 4 | 182 |  | 144340 | 144743
IDP8476 | 380.83 | 4.06 | ISU IBM Map7 4 | 182 |  | 155628 | 156053
IDP851 | 380.83 | 4.06 | cIBM2006 4 | 182 |  | 600384 | 601037
[NAME] | 385.66 | 4.06 | Genetic 2008 4 |  | glossy4, also gl16
TIDP3101 | 386.1 | 4.06 | ISU IBM Map7 4 | 182 |  | 3120624 | 3123142
gpm55 | 386.55 | 4.06 | cIBM2006 4 | 182 |  | 2909126 | 2909718
gpm439 | 386.55 | 4.06 | cIBM2006 4 | 182 |  | 3923722 | 3924226
gpm366 | 386.62 | 4.06 | cIBM2006 4 | 182 |  | 3923741 | 3923885
[NAME] | 386.62 | 4.06 | cIBM2006 4 | 182 |  | 6100497 | 6100384
trg1 | 386.71 | 4.06 | BNL 96 frame 4 |  | [NAME]
csu907a | 387.02 | 4.06 | UMC 98 4 | 182 |  | 3932422 | 3933433
csu643b | 387.02 | 4.06 | UMC 98 4 |  | RFLP
umc1329 | 387.13 | 4.06 | LHRF Gnp2004 4 | 182 |  | 5701599 | 5702188
gpm903b | 389.4 | 4.06 | cIBM2006 4 |  | Wrong, RFLP,in Chr10
rgpc601a | 391.42 | 4.06 | UMC 98 4 | 182 |  | 4656907 | 4656821
[NAME] | 391.58 | 4.06 | Mycogen 1992 4 |  | RFLP
bnlg2291 | 392.2 | 4.06 | IBM2 4 | 182 |  | 9524322 | 9524494
bnlg1137 | 392.4 | 4.06 | IBM2 4 | 182 |  | 9722392 | 9722637
bnlg1784 | 393.78 | 4.06 | IBM2 FPC0507 4 | 182 |  | 10887391 | 10887633
pza03116 | 393.79 | 4.06 | NAM 4 | 182 |  | 6938306 | 6938884
pco061578 | 396.86 | 4.06 | NAM 4 | 182 |  | 7211319 | 7211600
umc66a(lcr) (CBM 4.07) | 397.4 | 4.07 | IBM2 4 | 182 |  | 11009231 | 11010272
gsy289b | 399.11 | 4.07 | cIBM2006 4 | 182 | glutamine synthetase | 7108835 | 7110774
IDP4759 | 399.44 | 4.07 | ISU IBM Map7 4 | 182 |  | 6939756 | 6940413
IDP4994 | 399.44 | 4.07 | ISU IBM Map7 4 | 182 |  | 7050138 | 7050668
IDP8497 | 399.44 | 4.07 | ISU IBM Map7 4 | 182 |  | 7066428 | 7066833
IDP6586 | 399.44 | 4.07 | ISU IBM Map7 4 | 182 |  | 7098173 | 7098932
IDP7036 | 399.44 | 4.07 | ISU IBM Map7 4 | 182 |  | 7098767 | 7099223
pza01289 | 400.28 | 4.07 | IBM SNP 2007 4 | 182 |  | 10489802 | 10489596
gpm117c | 400.75 | 4.07 | cIBM2006 4 | 182 |  | 9950588 | 9950699
TIDP3545 | 402.6 | 4.07 | ISU IBM Map7 4 | 182 |  | 7210739 | 7211169
TIDP9252 | 402.6 | 4.07 | ISU IBM Map7 4 | 182 |  | 7210779 | 7211287
IDP7922 | 402.6 | 4.07 | ISU IBM Map7 4 | 182 |  | 7418720 | 7419147
TIDP8850 | 402.6 | 4.07 | ISU IBM Map7 4 | 182 |  | 8950252 | 8950528
IDP6964 | 402.6 | 4.07 | ISU IBM Map7 4 | 182 |  | 9526721 | 9527036
TIDP7116 | 402.6 | 4.07 | ISU IBM Map7 4 | 182 |  | 9535613 | 9536013
IDP6635 | 402.6 | 4.07 | ISU IBM Map7 4 | 182 |  | 9535639 | 9536301
TIDP6115 | 402.6 | 4.07 | ISU IBM Map7 4 | 182 |  | 10777731 | 10778340
TIDP6684 | 403.66 | 4.07 | ISU IBM Map7 4 | 182 |  | 10714523 | 10715171
phm3155 | 404.01 | 4.07 | NAM 4 | 182 |  | 11344207 | 11343636
prh1 | 404.25 | 4.07 | UMC 98 4 | 182 | ser/thr protein phosphatase1 | 10888099 | 10887937
abc1 | 404.25 | 4.07 | Genetic 2008 4 | 182 | ABC (yeast) homolog1 | 11508758 | 11509353
csu525(rpL17) | 404.25 | 4.07 | UMC 98 4 | 182 |  | 11653066 | 11654717
bti31094::Ac | 404.25 | 4.07 | cIBM2006 4 |  | Ac line
IDP4532 | 405.76 | 4.07 | ISU IBM Map7 4 | 182 |  | 11009535 | 11010312
IDP4074 | 405.76 | 4.07 | cIBM2006 4 | 182 |  | 11009537 | 11009884
IDP8258 | 405.76 | 4.07 | ISU IBM Map7 4 | 182 |  | 11602996 | 11603493
TIDP2840 | 406.1 | 4.07 | ISU IBM Map7 4 | 182 |  | 11598992 | 11598438
rz446a | 406.49 | 4.07 | UMC 98 4 | 182 |  | 11973877 | 11973727
IDP3905 | 406.65 | 4.07 | cIBM2006 4 | 182 |  | 11735986 | 11736375
klp1e | 408.23 | 4.07 | UMC 98 4 |  | unknown probe type
umc104a | 408.7 | 4.07 | IBM2 4 | 182 | RFLP | 12564737 | 12564225
dupssr34 | 409.35 | 4.07 | LHRF Gnp2004 4 | 182 |  | 12022646 | 12022802
pco080224b | 410.53 | 4.07 | IBM SNP 2007 4 | 182 |  | 12427891 | 12427642
[NAME] | 410.8 | 4.07 | IBM2 4 | 182 |  | 12555532 | 12555599
pza00271 | 410.86 | 4.07 | NAM 4 | 182 |  | 12427891 | 12427603
isu35 | 411.21 | 4.07 | CU 99 4 |  | unknown probe type
umc2038 | 411.3 | 4.07 | IBM2 4 | 182 |  | 12683537 | 12683658
TIDP2986 | 412.42 | 4.07 | ISU IBM Map7 4 | 182 |  | 12435014 | 12435603
IDP4515 | 413.25 | 4.07 | ISU IBM Map7 4 | 182 |  | 13044658 | 13045419
umc19 | 414.2 | 4.07 | IBM2 4 | 182 |  | 13212067 | 13212106
uaz66b | 414.2 | 4.07 | BNL 95 4 |  | Wrong, RFLP, in Chr6
bnl8.08e | 414.2 | 4.07 | BNL 95 4 |  | RFLP
bnl8.08i | 414.2 | 4.07 | BNL 93 4 |  | RFLP
umc229a | 414.2 | 4.07 | UMC 98 4 |  | RFLP
pco143166 | 414.28 | 4.07 | IBM SNP 2007 4 | 182 |  | 13024007 | 13025463
pco068393 | 414.28 | 4.07 | IBM SNP 2007 4 | 182 |  | 13055664 | 13056170
umc1651 | 414.28 | 4.07 | IBM2 FPC0507 4 | 182 |  | 13126679 | 13126771
umc1994 | 414.32 | 4.07 | IBM2 FPC0507 4 | 182 |  | 14789871 | 14790432
umc1620 | 414.32 | 4.07 | IBM2 FPC0507 4 | 182 |  | 15070867 | 15070356
lkrsdh1 | 414.32 | 4.07 | Genetic 2008 4 | 182 | lysine-ketoglutarate reductase/saccharopine dehydrogenase1 | 15532856 | 15543686
pco110662 | 415.23 | 4.07 | NAM 4 | 182 |  | 13133700 | 13138164
pcna2 | 415.72 | 4.07 | ISU IBM Map4 4 | 182 | proliferating cell nuclear antigen2 | 12866416 | 12867259
TIDP3563 | 415.72 | 4.07 | ISU IBM Map7 4 | 182 |  | 13146065 | 13146548
[NAME] | 415.72 | 4.07 | ISU IBM Map7 4 | 182 |  | 13217776 | 13218033
mon00128::Ac | 417.49 | 4.07 | cIBM2006 4 |  | Ac line
gpm520 | 420.58 | 4.07 | LHRF Gnp2004 4 | 182 |  | 13624424 | 13625003
mmp115a | 420.6 | 4.07 | IBM2 4 |  | Wrong, RFLP, in Chr3
bnl5.67a | 420.87 | 4.07 | UMC 98 4 |  | RFLP
pbs13c | 420.87 | 4.07 | BNL 95 4 |  | unknown probe type
agrp168c | 420.87 | 4.07 | UMC 98 4 |  | RFLP
npi396 | 421.58 | 4.07 | BNL 95 4 |  | RFLP
uaz47a | 421.58 | 4.07 | BNL 95 4 |  | RFLP
IDP1671 | 421.61 | 4.07 | ISU IBM Map4 4 | 182 |  | 13763101 | 13764089
TIDP7107 | 421.61 | 4.07 | ISU IBM Map7 4 | 197 | in ctg197 of Chr4
mon03078::Ac | 422 | 4.07 | cIBM2006 4 |  | Ac line
pza02825 | 422.08 | 4.07 | IBM SNP 2007 4 | 182 |  | 14425847 | 14425336
IDP8954 | 422.82 | 4.07 | ISU IBM Map7 4 | 182 |  | 13821512 | 13821809
IDP1421 | 422.82 | 4.07 | ISU IBM Map7 4 | 182 |  | 13822597 | 13822080
IDP7522 | 422.82 | 4.07 | ISU IBM Map7 4 | 182 |  | 13882308 | 13882735
agrr27 | 422.96 | 4.07 | Mycogen 1992 4 |  | RFLP
umc1847 | 424.08 | 4.07 | SSR Tx303xCO159 2003 4 | 182 |  | 15133459 | 15133611
umc244a | 424.46 | 4.07 | UMC 98 4 |  | RFLP
pza03275 | 425.69 | 4.07 | NAM 4 | 182 |  | 15134275 | 15133632
uaz74 | 425.82 | 4.07 | BNL 95 4 | 182 |  | 15532113 | 15532242
bnlg1189 | 428 | 4.07 | IBM2 4 | 182 |  | 16839930 | 16840141
nii2 | 428.4 | 4.07 | Genetic 2008 4 | 182 | nitrite reductase2 | 18367304 | 18370473
umc1194 | 429.56 | 4.07 | SSR T218xGT119 2002 4 | 182 |  | 18041484 | 18042093
bnl5.24b | 430.2 | 4.07 | IBM2 4 | 182 | RFLP | 16912345 | 16912466
IDP7898 | 431.23 | 4.07 | ISU IBM Map7 4 | 182 |  | 17132551 | 17132868
dek31 | 432 | 4.07 | Genetic 2008 4 |  | defective kernel31
uaz222 | 436.36 | 4.07 | BNL 95 4 | 182 |  | 16291555 | 16292166
wsu(nia3) | 436.36 | 4.07 | BNL 96 frame 4 |  | RFLP
IDP9018 | 436.84 | 4.07 | ISU IBM Map7 4 | 182 |  | 18299652 | 18300363
IDP7911 | 436.84 | 4.07 | ISU IBM Map7 4 | 182 |  | 18377706 | 18378456
PCO119336 | 436.95 | 4.07 | INDEL(MMP) IBM 2003 4 | 182 |  | 18240161 | 18253306
asg33 | 437.5 | 4.07 | IBM2 4 | 182 |  | 18475261 | 18475420
IDP8018 | 438.04 | 4.07 | ISU IBM Map7 4 | 182 |  | 18364363 | 18364984
pco123260 | 438.05 | 4.07 | IBM SNP 2007 4 | 182 |  | 18361225 | 18365271
csu672b | 438.05 | 4.07 | IBM2 FPC0507 4 | 182 |  | 18537202 | 18538673
csu597d(dah) | 438.05 | 4.07 | UMC 98 4 |  | Wrong, RFLP, in Chr7
IDP7912 | 439.25 | 4.07 | ISU IBM Map7 4 | 182 |  | 18481263 | 18481560
gpm108a | 439.82 | 4.07 | cIBM2006 4 | 182 |  | 18369836 | 18370396
asg9a | 441.14 | 4.07 | UMC 98 4 |  | RFLP
bti00207::Ac | 441.61 | 4.07 | cIBM2006 4 | 182 |  | 18475282 | 18477856
umc1775 | 443.2 | 4.07 | IBM2 4 | 182 |  | 19419305 | 19421783
uaz171 | 443.31 | 4.07 | IBM2 FPC0507 4 | 182 |  | 19610096 | 19610434
zmm19 | 443.53 | 4.07 | NAM 4 | 182 |  | 18660242 | 18666960
mmc0341 | 443.76 | 4.07 | SSR T218xGT119 2002 4 | 182 |  | 20224298 | 20224541
umc127c (CBM 4.08) | 443.92 | 4.08 | UMC 98 4 | 182 |  | 19591864 | 19592078
asg74b | 443.92 | 4.08 | UMC 98 4 |  | RFLP
rpl29 | 443.95 | 4.08 | Genetic 2008 4 | 182 | ribosomal protein L29 | 20363516 | 20364957
IDP4760 | 444.06 | 4.08 | ISU IBM Map7 4 | 182 |  | 19487679 | 19488102
IDP8587 | 444.06 | 4.08 | ISU IBM Map7 4 | 182 |  | 19558578 | 19559358
IDP7899 | 444.06 | 4.08 | ISU IBM Map7 4 | 182 |  | 19580324 | 19580689
gpm302a | 445.08 | 4.08 | LHRF Gnp2004 4 |  | Wrong, RFLP, in Chr1
IDP1980 | 446.06 | 4.08 | cIBM2006 4 | 182 |  | 19589173 | 19589632
umc2009 | 447.01 | 4.08 | SSR T218xGT119 2002 4 | 182 |  | 20224385 | 20224490
gpm151c | 448.14 | 4.08 | LHRF Gnp2004 4 |  | Wrong, RFLP, in Chr7
umc1667 | 449.4 | 4.08 | IBM2 4 | 182 |  | 20674604 | 20674745
pco132510 | 450.39 | 4.08 | NAM 4 | 182 |  | 20444741 | 20445207
pza01976 | 450.73 | 4.08 | NAM 4 | 182 | RFLP | 20565652 | 20566090
npi292 | 450.86 | 4.08 | BNL 96 frame 4 |  | RFLP
asg85a | 451.01 | 4.08 | UMC 98 4 | 182 |  | 19990336 | 19991172
AY109534 | 452.1 | 4.08 | IBM2 4 | 182 |  | 20999118 | 21000154
umc1808 | 452.9 | 4.08 | IBM2 4 | 182 |  | 20997361 | 20997452
[NAME] | 453.06 | 4.08 | IBM SNP 2007 4 | 182 |  | 20992987 | 20995030
mmp3 | 455.9 | 4.08 | IBM2 4 | 182 |  | 21191108 | 21191726
gpm874a | 456.68 | 4.08 | cIBM2006 4 | 182 |  | 21477570 | 21479168
asg27a | 458.1 | 4.08 | IBM2 4 |  | RFLP
npi253b | 459.71 | 4.08 | BNL 96 frame 4 |  | Wrong, RFLP, in Chr9
bnl22 | 459.71 | 4.08 | BNL 95 4 |  | RFLP
isu132a | 459.71 | 4.08 | CU 99 4 |  | RFLP
o1 | 459.98 | 4.08 | Genetic 2008 4
IDP7306 | 461.59 | 4.08 | ISU IBM Map7 4 | 182 |  | 21189246 | 21189800
IDP7504 | 461.59 | 4.08 | ISU IBM Map7 4 | 182 |  | 21193144 | 21193575
IDP7901 | 462.82 | 4.08 | ISU IBM Map7 4 | 182 |  | 21283093 | 21283651
umc1871 | 463.38 | 4.08 | SSR Tx303xCO159 2003 4 | 182 |  | 21636784 | 21636925
IDP8084 | 464.05 | 4.08 | ISU IBM Map7 4 | 182 |  | 21547670 | 21547974
gpm612a | 464.47 | 4.08 | LHRF Gnp2004 4 | 182 |  | 800 | 1079
a These highlighted markers are high-confidence framework markers used to calculate physical/genetic ratios