Spreadsheet: 0a87dfcb-9feb-4e61-b7c1-d718367ad609
Sheet: Sheet1

DREAM5: HK to ME prediction correlations | Unnamed: 1 | Unnamed: 2 | Unnamed: 3 | Unnamed: 4 | Unnamed: 5 | Unnamed: 6 | Unnamed: 7 | Unnamed: 8 | Unnamed: 9 | Unnamed: 10 | Unnamed: 11
Pearson correlations |  |  |  |  |  |  |  |  |  | Abbreviations and terms
TF | HMIK | LINEAR | LF + LINEAR | LF + SD + LINEAR | QN + LINEAR | LF + QN + LINEAR | LF + SD + QN + LINEAR |  |  | TF | Transcription factor
Cebpb | 0.627 | 0.543 | 0.543 | 0.544 | 0.531 | 0.532 | 0.524 |  |  | HMIK | Highest median intensity K-mer predictor
Egr2 | 0.651 | 0.769 | 0.763 | 0.767 | 0.8 | 0.801 | 0.798 |  |  | LF | Low intensity probe filtering
Esr1 | 0.712 | 0.768 | 0.772 | 0.787 | 0.733 | 0.734 | 0.746 |  |  | SD | Spatial detrending
Foxj2 | 0.424 | 0.604 | 0.604 | 0.607 | 0.62 | 0.616 | 0.62 |  |  | QN | Quantile normalization
[NAME] | 0.585 | 0.632 | 0.625 | 0.635 | 0.617 | 0.618 | 0.619
Foxo3 | 0.635 | 0.535 | 0.535 | 0.538 | 0.574 | 0.577 | 0.574
Foxo4 | 0.764 | 0.731 | 0.731 | 0.734 | 0.724 | 0.727 | 0.731
Foxp1 | 0.616 | 0.685 | 0.698 | 0.701 | 0.67 | 0.685 | 0.689
Foxp2 | 0.359 | 0.665 | 0.675 | 0.68 | 0.687 | 0.687 | 0.693
Gmeb2 | 0.734 | 0.394 | 0.339 | 0.353 | 0.8 | 0.802 | 0.808
Irf2 | 0.642 | 0.665 | 0.665 | 0.668 | 0.721 | 0.723 | 0.725
[NAME] | 0.233 | 0.473 | 0.47 | 0.472 | 0.477 | 0.476 | 0.479
Mecp2 | 0.504 | 0.736 | 0.736 | 0.738 | 0.714 | 0.714 | 0.717
Nr2c1 | 0.519 | 0.576 | 0.591 | 0.591 | 0.579 | 0.58 | 0.582
[NAME] | 0.544 | 0.657 | 0.657 | 0.659 | 0.649 | 0.649 | 0.651
Sox14 | 0.471 | 0.624 | 0.624 | 0.629 | 0.626 | 0.625 | 0.63
Sp1 | 0.407 | 0.626 | 0.626 | 0.628 | 0.632 | 0.632 | 0.633
Tbx3 | 0.338 | 0.419 | 0.42 | 0.428 | 0.429 | 0.43 | 0.438
Tcf3 | 0.757 | 0.696 | 0.695 | 0.697 | 0.625 | 0.627 | 0.636
[NAME] | 0.195 | 0.231 | 0.233 | 0.235 | 0.238 | 0.238 | 0.239
Ar | 0.307 | 0.451 | 0.461 | 0.461 | 0.459 | 0.46 | 0.457
[NAME] | 0.516 | 0.625 | 0.625 | 0.629 | 0.629 | 0.629 | 0.632
Foxo6 | 0.666 | 0.678 | 0.678 | 0.679 | 0.706 | 0.708 | 0.712
Klf12 | 0.376 | 0.642 | 0.641 | 0.633 | 0.624 | 0.625 | 0.628
Klf8 | 0.637 | 0.646 | 0.634 | 0.638 | 0.735 | 0.732 | 0.734
Klf9 | 0.374 | 0.518 | 0.518 | 0.517 | 0.574 | 0.571 | 0.58
Mlx | 0.764 | 0.734 | 0.733 | 0.735 | 0.684 | 0.686 | 0.687
Mzf1 | 0.569 | 0.51 | 0.51 | 0.515 | 0.521 | 0.525 | 0.548
Mzf1 | 0.403 | 0.513 | 0.518 | 0.517 | 0.529 | 0.532 | 0.532
[NAME] | 0.44 | 0.6 | 0.6 | 0.602 | 0.602 | 0.602 | 0.601
Nr2f6 | 0.831 | 0.693 | 0.689 | 0.693 | 0.766 | 0.768 | 0.773
Nr4a2 | 0.58 | 0.724 | 0.726 | 0.733 | 0.688 | 0.688 | 0.706
Pou2f1 | 0.629 | 0.622 | 0.622 | 0.623 | 0.66 | 0.662 | 0.664
Mypop | 0.684 | 0.695 | 0.695 | 0.698 | 0.756 | 0.761 | 0.757
Pou1f1 | 0.593 | 0.587 | 0.587 | 0.592 | 0.671 | 0.672 | 0.675
Prdm11 | 0.803 | 0.723 | 0.723 | 0.726 | 0.795 | 0.797 | 0.8
Rorb | 0.713 | 0.722 | 0.725 | 0.724 | 0.76 | 0.762 | 0.763
Sox10 | 0.588 | 0.705 | 0.742 | 0.746 | 0.733 | 0.735 | 0.738
Sox3 | 0.514 | 0.652 | 0.652 | 0.655 | 0.675 | 0.675 | 0.678
Sox6 | 0.461 | 0.512 | 0.512 | 0.514 | 0.503 | 0.504 | 0.506
Srebf1 | 0.501 | 0.628 | 0.637 | 0.642 | 0.65 | 0.65 | 0.655
Tbx2 | 0.642 | 0.666 | 0.666 | 0.669 | 0.67 | 0.672 | 0.66
Tbx20 | 0.598 | 0.502 | 0.503 | 0.505 | 0.417 | 0.419 | 0.421
Tbx4 | 0.45 | 0.536 | 0.536 | 0.537 | 0.571 | 0.57 | 0.572
Tbx5 | 0.479 | 0.504 | 0.504 | 0.505 | 0.536 | 0.536 | 0.538
Tcfec | 0.629 | 0.682 | 0.682 | 0.687 | 0.741 | 0.741 | 0.741
Xbp1 | 0.525 | 0.677 | 0.677 | 0.68 | 0.687 | 0.687 | 0.69
Zfp202 | 0.587 | 0.701 | 0.701 | 0.702 | 0.701 | 0.701 | 0.702
Zfp263 | 0.488 | 0.598 | 0.598 | 0.589 | 0.579 | 0.579 | 0.571
Zfp3 | 0.223 | 0.394 | 0.394 | 0.401 | 0.396 | 0.395 | 0.403
Zfx | 0.74 | 0.851 | 0.851 | 0.852 | 0.837 | 0.838 | 0.837
Zkscan1 | 0.391 | 0.706 | 0.706 | 0.707 | 0.704 | 0.703 | 0.704
Zscan10 | 0.417 | 0.61 | 0.61 | 0.617 | 0.619 | 0.62 | 0.625
Ahctf1 | 0.406 | 0.566 | 0.571 | 0.578 | 0.579 | 0.579 | 0.585
Atf3 | 0.478 | 0.537 | 0.533 | 0.545 | 0.553 | 0.554 | 0.566
Atf4 | 0.21 | 0.474 | 0.475 | 0.479 | 0.462 | 0.461 | 0.461
Dnajc21 | 0.438 | 0.664 | 0.665 | 0.692 | 0.683 | 0.683 | 0.703
[NAME] | 0.31 | 0.552 | 0.552 | 0.555 | 0.558 | 0.558 | 0.562
Egr3 | 0.663 | 0.675 | 0.658 | 0.658 | 0.713 | 0.714 | 0.722
Esrrb | 0.368 | 0.543 | 0.548 | 0.555 | 0.545 | 0.547 | 0.552
Esrrg | 0.509 | 0.572 | 0.573 | 0.575 | 0.589 | 0.591 | 0.59
Foxc2 | 0.504 | 0.622 | 0.622 | 0.622 | 0.619 | 0.619 | 0.621
Foxg1 | 0.627 | 0.662 | 0.646 | 0.664 | 0.673 | 0.675 | 0.679
Gata4 | 0.652 | 0.695 | 0.696 | 0.696 | 0.77 | 0.77 | 0.77
Mybl2 | 0.643 | 0.673 | 0.68 | 0.683 | 0.666 | 0.668 | 0.669
Nhlh2 | 0.169 | 0.401 | 0.402 | 0.403 | 0.391 | 0.39 | 0.389
Nkx2-9 | 0.701 | 0.719 | 0.719 | 0.727 | 0.731 | 0.736 | 0.733
Nr2e1 | 0.628 | 0.692 | 0.692 | 0.697 | 0.731 | 0.732 | 0.739
Nr2f1 | 0.646 | 0.418 | 0.419 | 0.424 | 0.675 | 0.678 | 0.683
Nr5a2 | 0.456 | 0.414 | 0.428 | 0.429 | 0.438 | 0.425 | 0.444
Pou1f1 | 0.561 | 0.656 | 0.656 | 0.659 | 0.645 | 0.646 | 0.65
Rarg | 0.694 | 0.632 | 0.632 | 0.634 | 0.731 | 0.732 | 0.736
Rfx7 | 0.418 | 0.368 | 0.377 | 0.378 | 0.352 | 0.354 | 0.357
Rora | 0.459 | 0.506 | 0.506 | 0.507 | 0.509 | 0.51 | 0.509
Sdccag8 | 0.666 | 0.743 | 0.743 | 0.745 | 0.737 | 0.736 | 0.74
Snai1 | 0.799 | 0.839 | 0.839 | 0.841 | 0.831 | 0.831 | 0.831
Sp140 | 0.346 | 0.625 | 0.624 | 0.624 | 0.604 | 0.603 | 0.604
Tbx1 | 0.118 | 0.188 | 0.189 | 0.189 | 0.188 | 0.188 | 0.189
Zbtb1 | 0.416 | 0.629 | 0.629 | 0.631 | 0.63 | 0.63 | 0.631
Zfp300 | 0.301 | 0.614 | 0.614 | 0.62 | 0.609 | 0.608 | 0.613
Zfp637 | 0.294 | 0.628 | 0.628 | 0.629 | 0.616 | 0.615 | 0.618
Zic5 | 0.438 | 0.456 | 0.458 | 0.458 | 0.47 | 0.471 | 0.47
Zkscan5 | 0.295 | 0.584 | 0.584 | 0.588 | 0.585 | 0.584 | 0.584
Zfp740 | 0.583 | 0.755 | 0.721 | 0.76 | 0.705 | 0.74 | 0.742
Zscan10 | 0.394 | 0.569 | 0.569 | 0.571 | 0.569 | 0.569 | 0.571
Zscan10 | 0.292 | 0.544 | 0.544 | 0.548 | 0.542 | 0.542 | 0.546
Average | 0.515 | 0.603 | 0.603 | 0.607 | 0.62 | 0.621 | 0.624
Spearman correlations
TF | HMIK | LINEAR | LF + LINEAR | LF + SD + LINEAR | QN + LINEAR | LF + QN + LINEAR | LF + SD + QN + LINEAR
Cebpb | 0.462 | 0.654 | 0.654 | 0.653 | 0.661 | 0.66 | 0.657
Egr2 | 0.482 | 0.74 | 0.736 | 0.738 | 0.735 | 0.734 | 0.735
Esr1 | 0.454 | 0.629 | 0.638 | 0.681 | 0.648 | 0.65 | 0.679
Foxj2 | 0.44 | 0.645 | 0.645 | 0.648 | 0.647 | 0.647 | 0.651
[NAME] | 0.386 | 0.477 | 0.475 | 0.478 | 0.479 | 0.479 | 0.482
Foxo3 | 0.436 | 0.583 | 0.583 | 0.583 | 0.588 | 0.588 | 0.589
Foxo4 | 0.603 | 0.715 | 0.715 | 0.715 | 0.712 | 0.713 | 0.713
Foxp1 | 0.472 | 0.631 | 0.631 | 0.632 | 0.632 | 0.632 | 0.633
Foxp2 | 0.42 | 0.725 | 0.745 | 0.749 | 0.735 | 0.735 | 0.741
Gmeb2 | 0.764 | 0.848 | 0.852 | 0.85 | 0.861 | 0.861 | 0.857
Irf2 | 0.585 | 0.74 | 0.74 | 0.741 | 0.744 | 0.744 | 0.746
[NAME] | 0.269 | 0.571 | 0.568 | 0.571 | 0.568 | 0.568 | 0.57
Mecp2 | 0.511 | 0.731 | 0.731 | 0.732 | 0.73 | 0.728 | 0.73
Nr2c1 | 0.28 | 0.455 | 0.484 | 0.485 | 0.474 | 0.477 | 0.477
[NAME] | 0.511 | 0.652 | 0.651 | 0.654 | 0.667 | 0.666 | 0.67
Sox14 | 0.475 | 0.706 | 0.706 | 0.709 | 0.705 | 0.704 | 0.709
Sp1 | 0.355 | 0.617 | 0.617 | 0.618 | 0.616 | 0.616 | 0.617
Tbx3 | 0.371 | 0.63 | 0.631 | 0.646 | 0.63 | 0.629 | 0.645
Tcf3 | 0.407 | 0.513 | 0.513 | 0.514 | 0.506 | 0.506 | 0.508
[NAME] | 0.124 | 0.222 | 0.222 | 0.225 | 0.224 | 0.224 | 0.225
Ar | 0.32 | 0.541 | 0.553 | 0.555 | 0.548 | 0.548 | 0.545
[NAME] | 0.38 | 0.666 | 0.666 | 0.667 | 0.668 | 0.667 | 0.667
Foxo6 | 0.492 | 0.644 | 0.644 | 0.645 | 0.647 | 0.648 | 0.648
Klf12 | 0.369 | 0.635 | 0.634 | 0.638 | 0.638 | 0.638 | 0.643
Klf8 | 0.446 | 0.703 | 0.707 | 0.708 | 0.711 | 0.706 | 0.707
Klf9 | 0.339 | 0.668 | 0.668 | 0.667 | 0.667 | 0.664 | 0.663
Mlx | 0.325 | 0.496 | 0.5 | 0.501 | 0.504 | 0.503 | 0.499
Mzf1 | 0.219 | 0.253 | 0.253 | 0.255 | 0.253 | 0.253 | 0.257
Mzf1 | 0.307 | 0.479 | 0.481 | 0.481 | 0.482 | 0.483 | 0.484
[NAME] | 0.426 | 0.648 | 0.648 | 0.649 | 0.648 | 0.648 | 0.647
Nr2f6 | 0.494 | 0.639 | 0.644 | 0.644 | 0.643 | 0.645 | 0.645
Nr4a2 | 0.458 | 0.731 | 0.734 | 0.741 | 0.728 | 0.727 | 0.742
Pou2f1 | 0.591 | 0.668 | 0.668 | 0.668 | 0.678 | 0.677 | 0.678
Mypop | 0.473 | 0.612 | 0.612 | 0.613 | 0.624 | 0.625 | 0.625
Pou1f1 | 0.506 | 0.582 | 0.582 | 0.583 | 0.592 | 0.592 | 0.593
Prdm11 | 0.637 | 0.802 | 0.802 | 0.805 | 0.803 | 0.803 | 0.805
Rorb | 0.513 | 0.654 | 0.657 | 0.658 | 0.651 | 0.652 | 0.652
Sox10 | 0.516 | 0.665 | 0.716 | 0.722 | 0.703 | 0.705 | 0.711
Sox3 | 0.508 | 0.7 | 0.7 | 0.701 | 0.699 | 0.699 | 0.7
Sox6 | 0.377 | 0.543 | 0.543 | 0.545 | 0.545 | 0.544 | 0.546
Srebf1 | 0.385 | 0.656 | 0.671 | 0.675 | 0.658 | 0.657 | 0.665
Tbx2 | 0.476 | 0.629 | 0.629 | 0.631 | 0.629 | 0.629 | 0.626
Tbx20 | 0.336 | 0.475 | 0.475 | 0.476 | 0.48 | 0.48 | 0.482
Tbx4 | 0.316 | 0.529 | 0.529 | 0.528 | 0.55 | 0.548 | 0.548
Tbx5 | 0.281 | 0.395 | 0.395 | 0.396 | 0.409 | 0.408 | 0.409
Tcfec | 0.408 | 0.661 | 0.661 | 0.664 | 0.675 | 0.674 | 0.676
Xbp1 | 0.452 | 0.663 | 0.663 | 0.666 | 0.663 | 0.662 | 0.664
Zfp202 | 0.37 | 0.62 | 0.62 | 0.621 | 0.62 | 0.62 | 0.621
Zfp263 | 0.361 | 0.615 | 0.615 | 0.615 | 0.622 | 0.62 | 0.623
Zfp3 | 0.26 | 0.494 | 0.494 | 0.501 | 0.494 | 0.493 | 0.5
Zfx | 0.511 | 0.776 | 0.776 | 0.777 | 0.776 | 0.776 | 0.777
Zkscan1 | 0.413 | 0.768 | 0.767 | 0.768 | 0.767 | 0.766 | 0.765
Zscan10 | 0.339 | 0.646 | 0.646 | 0.651 | 0.646 | 0.645 | 0.651
Ahctf1 | 0.408 | 0.549 | 0.553 | 0.56 | 0.555 | 0.555 | 0.563
Atf3 | 0.315 | 0.5 | 0.5 | 0.51 | 0.5 | 0.5 | 0.51
Atf4 | 0.246 | 0.537 | 0.538 | 0.541 | 0.533 | 0.532 | 0.531
Dnajc21 | 0.368 | 0.651 | 0.652 | 0.68 | 0.66 | 0.66 | 0.683
[NAME] | 0.418 | 0.696 | 0.696 | 0.699 | 0.698 | 0.698 | 0.702
Egr3 | 0.503 | 0.677 | 0.679 | 0.682 | 0.679 | 0.679 | 0.68
Esrrb | 0.297 | 0.61 | 0.615 | 0.62 | 0.599 | 0.606 | 0.604
Esrrg | 0.466 | 0.602 | 0.603 | 0.604 | 0.588 | 0.59 | 0.59
Foxc2 | 0.449 | 0.638 | 0.638 | 0.637 | 0.638 | 0.638 | 0.638
Foxg1 | 0.489 | 0.659 | 0.658 | 0.661 | 0.66 | 0.66 | 0.662
Gata4 | 0.593 | 0.767 | 0.776 | 0.775 | 0.773 | 0.774 | 0.772
Mybl2 | 0.477 | 0.599 | 0.602 | 0.603 | 0.603 | 0.604 | 0.604
Nhlh2 | 0.206 | 0.534 | 0.536 | 0.537 | 0.524 | 0.522 | 0.521
Nkx2-9 | 0.682 | 0.854 | 0.854 | 0.851 | 0.853 | 0.85 | 0.852
Nr2e1 | 0.546 | 0.699 | 0.696 | 0.7 | 0.697 | 0.698 | 0.699
Nr2f1 | 0.666 | 0.763 | 0.764 | 0.764 | 0.765 | 0.762 | 0.762
Nr5a2 | 0.284 | 0.441 | 0.446 | 0.447 | 0.447 | 0.443 | 0.448
Pou1f1 | 0.605 | 0.748 | 0.748 | 0.75 | 0.761 | 0.759 | 0.762
Rarg | 0.406 | 0.592 | 0.592 | 0.591 | 0.613 | 0.61 | 0.608
Rfx7 | 0.393 | 0.527 | 0.53 | 0.529 | 0.53 | 0.531 | 0.53
Rora | 0.338 | 0.517 | 0.517 | 0.517 | 0.517 | 0.517 | 0.519
Sdccag8 | 0.561 | 0.729 | 0.729 | 0.728 | 0.731 | 0.73 | 0.731
Snai1 | 0.532 | 0.713 | 0.714 | 0.723 | 0.728 | 0.727 | 0.741
Sp140 | 0.355 | 0.628 | 0.627 | 0.626 | 0.625 | 0.623 | 0.616
Tbx1 | 0.295 | 0.466 | 0.469 | 0.47 | 0.469 | 0.468 | 0.47
Zbtb1 | 0.412 | 0.693 | 0.693 | 0.693 | 0.702 | 0.701 | 0.7
Zfp300 | 0.32 | 0.639 | 0.638 | 0.644 | 0.636 | 0.635 | 0.641
Zfp637 | 0.291 | 0.646 | 0.646 | 0.647 | 0.642 | 0.641 | 0.641
Zic5 | 0.3 | 0.44 | 0.441 | 0.442 | 0.444 | 0.444 | 0.445
Zkscan5 | 0.318 | 0.594 | 0.594 | 0.599 | 0.594 | 0.594 | 0.595
Zfp740 | 0.367 | 0.603 | 0.602 | 0.611 | 0.603 | 0.602 | 0.61
Zscan10 | 0.336 | 0.551 | 0.551 | 0.552 | 0.552 | 0.551 | 0.551
Zscan10 | 0.293 | 0.549 | 0.549 | 0.551 | 0.548 | 0.548 | 0.548
Average | 0.418 | 0.618 | 0.62 | 0.623 | 0.622 | 0.621 | 0.624