Spreadsheet: 9bfa0a58-9b77-4c57-8eb2-965ee711eccd
Sheet: Sheet1

rsID | [NAME] | Genes | chr | basepair.build36 | beta_Eur.Am. | SEbeta_Eur.Am. | p_Beta_Eu.Am._=_0 | Significant by [NAME] | N_Eu.Am. | beta_Af.Am. | SEbeta_Af.Am. | p_Beta_Af.Am._=_0 | N_Af.Am. | p_BetaAf.Am._equal_BetaEur.Am. | Af.Am._snpcat | beta_Hisp.Am. | SEbeta_Hisp.Am. | p_Beta_Hisp.Am._=_0 | N_Hisp.Am. | p_Beta_Hisp.Am._equal_Beta_Eur.Am. | Hisp.Am._snpcat | beta_As.Am. | SEbeta_As.Am. | p_Beta_As.Am._=_0 | N_As.Am. | p_Beta_As.Am._equal_Beta_Eur.Am. | As.Am._snpcat | beta_Nat. Amer. | SEbeta_Nat. Amer. | p_Beta_Nat. Amer._=_0 | N_Nat. Amer. | p_Beta_Nat. Amer._equal_Beta_Eur.Am. | Nat. Amer._snpcat | beta_Pac.Is. | SEbeta_Pac.Is. | p_Beta_Pac.Is._=_0 | N_Pac.Is. | p_Beta_Pac.Is._equal_Beta_Eur.Am. | Pac.Is._snpcat
rs17145738 | logTG | MLXIPL | 7 | 72620810 | -0.0762 | 0.0075 | 2.99076449667784e-24 | 1 | 22725 | -0.0269 | 0.012 | 0.0249829237602411 | 9105 | 0.000494238498996408 | differential | -0.087 | 0.0258 | 0.000745992474995746 | 2970 | 0.687709782746072 | strictly generalized | -0.1059 | 0.0401 | 0.00826866688724825 | 724 | 0.466598725323338 | strictly generalized | -0.0546 | 0.0262 | 0.0371629448021827 | 3326 | 0.428015274999674 | ambiguous | -0.2125 | 0.0724 | 0.00333458615237562 | 190 | 0.0611269484663401 | strictly generalized
rs599839 | LDL | CELSR2/PSRC1/SORT | 1 | 109623689 | 5.6711 | 0.4516 | 3.60234592747533e-36 | 1 | 16598 | 1.6026 | 0.723 | 0.0266506078607751 | 6503 | 1.81761517903713e-06 | differential | 8.6846 | 1.7503 | 6.9850811783229e-07 | 1066 | 0.0954928167757094 | strictly generalized | -1.4692 | 4.0276 | 0.715273398003404 | 465 | 0.0781027539791306 | ambiguous | 6.4924 | 0.9008 | 5.70423406301652e-13 | 3178 | 0.415040914195964 | strictly generalized | 10.0732 | 10.434 | 0.334334117556231 | 75 | 0.673386403011065 | ambiguous
rs780094 | logTG | GCKR | 2 | 27594741 | 0.0647 | 0.0055 | 6.0089382730814e-32 | 1 | 17484 | 0.0216 | 0.0099 | 0.0291229541523851 | 7399 | 0.000141418206216893 | differential | 0.0565 | 0.0173 | 0.00109118334582722 | 2190 | 0.651477854354405 | strictly generalized | 0.051 | 0.0326 | 0.11771962918912 | 472 | 0.678589047207616 | ambiguous | 0.0451 | 0.017 | 0.00797937753144294 | 3200 | 0.272659069415769 | strictly generalized | 0.1259 | 0.0936 | 0.178597634863095 | 75 | 0.513936636956237 | ambiguous
rs5219 | T2D | KCNJ11 | 11 | 17366148 | 0.119508944 | 0.029601221 | 5.40704166812197e-05 | 1 | 28947 | -0.094884494 | 0.061103968 | 0.120462113481815 | 10029 | 0.00159044542358021 | differential | 0.113056117 | 0.046283505 | 0.0145783739035098 | 5282 | 0.906501544749448 | ambiguous | 0.131109095 | 0.046008018 | 0.00437603454675649 | 5374 | 0.832077860465148 | strictly generalized | 0.032169407 | 0.060034472 | 0.592062969157548 | 2979 | 0.191950734832153 | ambiguous | 0.040175116 | 0.087638859 | 0.646653100355778 | 1410 | 0.391093850907473 | ambiguous
rs16996148 | LDL | [NAME]/PBX4; [NAME]/PBX4; NCAN; | 19 | 19519472 | -2.8888 | 0.6649 | 1.39457558197227e-05 | 1 | 20407 | 0.7651 | 0.7964 | 0.336703965897062 | 8541 | 0.000428414699656211 | differential | -2.1215 | 2.0143 | 0.292240412127587 | 2532 | 0.717554608888054 | ambiguous | -0.5305 | 2.436 | 0.827604392197198 | 690 | 0.350335379176774 | ambiguous | -1.0468 | 2.0862 | 0.615826813988175 | 3321 | 0.400206887419829 | ambiguous | 7.6866 | 5.9579 | 0.19699769013638 | 175 | 0.0777201796505824 | ambiguous
rs2954029 | logTG | TRIB1 | 8 | 126560154 | 0.0508 | 0.0132 | 0.000118850646483054 | 1 | 3175 | -0.0137 | 0.0185 | 0.458972071519614 | 1576 | 0.00453819748817534 | differential | 0.0588 | 0.0177 | 0.000893638364789827 | 1937 | 0.717114780067826 | strictly generalized | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA
[NAME] | HDL | LIPC | 15 | 56514617 | 1.7627 | 0.2398 | 1.9715834645832e-13 | 1 | 11745 | 0.312 | 0.4267 | 0.464661351220782 | 4031 | 0.00303823800836103 | differential | 0.6645 | 0.718 | 0.354712400930172 | 1460 | 0.146848628001101 | ambiguous | 2.2519 | 0.9912 | 0.0230929946258226 | 457 | 0.631437643021012 | ambiguous | NA | NA | NA | NA | NA | NA | 4.3857 | 3.4851 | 0.208241929434503 | 73 | 0.452738544406941 | ambiguous
rs9939609 | BMILIN | FTO | 16 | 52378028 | 0.0133 | 0.0017 | 5.1362549331613e-15 | 1 | 28286 | 0.0013 | 0.0033 | 0.693625785030416 | 6492 | 0.00122654273968918 | differential | -0.0133 | 0.0239 | 0.577879102806067 | 449 | 0.266927566249925 | ambiguous | 0.0108 | 0.0143 | 0.450102139445246 | 696 | 0.862177679089033 | ambiguous | 0.011 | 0.0056 | 0.0494969674357421 | 6168 | 0.694316141090984 | ambiguous | NA | NA | NA | NA | NA | NA
rs4420638 | LDL | APOE/C1/C4 | 19 | 50114786 | -5.3469 | 0.5135 | 2.17074095590708e-25 | 1 | 18087 | 0.1551 | 0.9176 | 0.865774697001908 | 6142 | 1.67252376635322e-07 | differential | -5.3516 | 1.7159 | 0.00181570831386034 | 2184 | 0.997906270483525 | strictly generalized | -7.2847 | 5.6887 | 0.200349596246995 | 222 | 0.734413225356761 | ambiguous | -3.9503 | 1.4309 | 0.00576758573565749 | 3329 | 0.358270670285051 | strictly generalized | -17.0295 | 9.7907 | 0.0819723922959962 | 99 | 0.233419450742123 | ambiguous
rs9989419 | HDL | CETP | 16 | 55542640 | -2.171 | 0.141 | 1.71008774458205e-53 | 1 | 20468 | 0.0206 | 0.2369 | 0.930706071768414 | 8568 | 1.8706599250719e-15 | differential | -2.2909 | 0.3924 | 5.27756038871391e-09 | 2591 | 0.773687410139944 | strictly generalized | -2.0662 | 1.0468 | 0.0484016462128574 | 467 | 0.920964694552402 | ambiguous | -1.7805 | 0.4201 | 2.25242159603771e-05 | 3160 | 0.37819366036916 | strictly generalized | -2.2785 | 2.2716 | 0.315842765042342 | 76 | 0.96232786818063 | ambiguous
rs28927680 | logTG | APOA1/C3/A4/A5 cluster | 11 | 116124283 | -0.1239 | 0.0096 | 4.15025620027844e-38 | 1 | 24258 | 0.0006 | 0.0091 | 0.947430318888529 | 9844 | 4.8621913486634e-21 | differential | -0.0823 | 0.0194 | 2.2127219258184e-05 | 2972 | 0.0546191903187347 | strictly generalized | -0.1138 | 0.0449 | 0.0112601126901862 | 725 | 0.825892505417515 | ambiguous | -0.0788 | 0.0198 | 6.89738564510783e-05 | 3338 | 0.0404057680249965 | strictly generalized | -0.4417 | 0.0497 | 6.25982994892922e-19 | 189 | 3.4226067120955e-10 | differentially generalized
[NAME] | HDL | CEPT; CETP; CETP | 16 | 55550825 | 3.6389 | 0.1507 | 8.09708371259375e-129 | 1 | 19443 | 2.7862 | 0.2542 | 5.90664286619785e-28 | 8318 | 0.00390808100771148 | differentially generalized | 2.676 | 0.4011 | 2.52938145634949e-11 | 2479 | 0.0246229716367729 | strictly generalized | 2.5795 | 1.1036 | 0.0194209672712798 | 469 | 0.341542172469263 | ambiguous | 3.0703 | 0.392 | 4.78651638911222e-15 | 3144 | 0.175765914485538 | strictly generalized | 3.2111 | 2.7513 | 0.243161509391271 | 76 | 0.876618394623691 | ambiguous
rs6511720 | LDL | LDLR | 19 | 11063306 | -7.3289 | 0.5252 | 2.95392656966512e-44 | 1 | 21986 | -8.1011 | 0.804 | 7.05431113321133e-24 | 9291 | 0.421344401323906 | strictly generalized | -6.4338 | 1.6226 | 7.33597361368788e-05 | 2513 | 0.599696339483633 | strictly generalized | -16.8535 | 3.692 | 4.99803988316863e-06 | 689 | 0.0106468392689866 | strictly generalized | -1.8415 | 1.7188 | 0.283995449312617 | 3319 | 0.00226400070265725 | differential | -15.4115 | 8.8375 | 0.08118079631296 | 175 | 0.361258769850743 | ambiguous
rs646776 | LDL | 1p13.3; 1p13.3; CELSR2/PSRC1/SORT1 | 1 | 109620053 | 5.7439 | 0.4484 | 1.44566021032989e-37 | 1 | 17155 | 4.4591 | 0.6301 | 1.4750714626875e-12 | 7724 | 0.096649592187619 | strictly generalized | 7.7043 | 1.4083 | 4.48417477898443e-08 | 1709 | 0.184700227028077 | strictly generalized | -0.3978 | 4.2292 | 0.925061222859743 | 470 | 0.148705500499304 | ambiguous | NA | NA | NA | NA | NA | NA | 9.6023 | 10.381 | 0.354972170940872 | 76 | 0.710389682738678 | ambiguous
rs3135506 | logTG | APOA1/C3/A4/A5 cluster | 11 | 116167617 | 0.1337 | 0.0111 | 2.05963872125414e-33 | 1 | 17743 | 0.1132 | 0.0178 | 2.02344918585233e-10 | 6301 | 0.328448552614354 | strictly generalized | 0.1304 | 0.0236 | 3.28691347846878e-08 | 2175 | 0.8993097062176 | strictly generalized | 0.062 | 0.3533 | 0.860695999824903 | 470 | 0.839257289532225 | ambiguous | 0.0887 | 0.0204 | 1.37360047543397e-05 | 3211 | 0.0526693218938565 | strictly generalized | -0.5735 | 0.3262 | 0.078726438436559 | 76 | 0.0302546082197776 | ambiguous
rs7903146 | T2D | TCF7L2 | 10 | 114748339 | 0.305794794 | 0.031665446 | 4.58887988016438e-22 | 1 | 27586 | 0.233309415 | 0.037301751 | 3.98407139233634e-10 | 9844 | 0.138495457413099 | strictly generalized | 0.304067988 | 0.052095688 | 5.32381823972947e-09 | 5312 | 0.97740309000217 | strictly generalized | 0.547032181 | 0.099152445 | 3.44674409686045e-08 | 5395 | 0.0204671325099325 | strictly generalized | 0.074425938 | 0.091861684 | 0.417827729562864 | 2976 | 0.017257925295826 | ambiguous | 0.285782585 | 0.122779473 | 0.019932884365792 | 1409 | 0.874591840418637 | ambiguous
rs328 | logTG | LPL | 8 | 19864004 | 0.0959 | 0.0084 | 3.45222144280944e-30 | 1 | 22279 | 0.0841 | 0.0151 | 2.55417992723802e-08 | 7749 | 0.494668234874496 | strictly generalized | 0.0914 | 0.0268 | 0.000648563069836926 | 2949 | 0.872704190448808 | strictly generalized | 0.0706 | 0.0401 | 0.0783063820702695 | 724 | 0.536892014161292 | ambiguous | 0.1096 | 0.0445 | 0.013781014284557 | 3335 | 0.762253691996168 | ambiguous | 0.1477 | 0.1006 | 0.142052387686013 | 190 | 0.607863976444065 | ambiguous
[NAME] | LDL | PCSK9 | 1 | 55278235 | -16.9271 | 1.4208 | 1.0032272041924e-32 | 1 | 21624 | -22.6432 | 5.2148 | 1.41125183249547e-05 | 8101 | 0.29024706544335 | strictly generalized | -23.3893 | 5.341 | 1.19116512851112e-05 | 2256 | 0.242299363420574 | strictly generalized | NA | NA | NA | NA | NA | NA | -15.6645 | 4.9158 | 0.00143974775655309 | 3328 | 0.805104962768143 | strictly generalized | NA | NA | NA | NA | NA | NA
rs6548238 | BMILIN | TMEM18 | 2 | 624905 | -0.0101 | 0.0019 | 1.06195875925788e-07 | 1 | 37061 | -0.0131 | 0.0036 | 0.000273816900031043 | 14492 | 0.461130076206445 | strictly generalized | -0.0019 | 0.005 | 0.703945415151674 | 6398 | 0.125264749920994 | ambiguous | 0.0005 | 0.0075 | 0.94684707139927 | 2041 | 0.170670218948338 | ambiguous | -0.0023 | 0.0046 | 0.617075077451974 | 6186 | 0.117061899243119 | ambiguous | -0.0143 | 0.0253 | 0.571925908937657 | 392 | 0.868517593203435 | ambiguous
rs174547 | logTG | FADS1 | 11 | 61327359 | -0.0394 | 0.0063 | 4.00152386252343e-10 | 1 | 14517 | -0.0482 | 0.0135 | 0.000356476834484327 | 7510 | 0.554723352580677 | strictly generalized | -0.0524 | 0.0165 | 0.00149445782758442 | 2083 | 0.461699752632421 | strictly generalized | -0.03 | 0.0308 | 0.330043642735855 | 472 | 0.764937063808229 | ambiguous | -0.0802 | 0.0176 | 5.19343424594341e-06 | 3176 | 0.0290676913732426 | strictly generalized | -0.1021 | 0.1021 | 0.317310507862914 | 74 | 0.53991728615148 | ambiguous
rs12654264 | LDL | HMGCR | 5 | 74684359 | -2.6629 | 0.3704 | 6.51458714467054e-13 | 1 | 20491 | -2.0245 | 0.612 | 0.000939626166420915 | 8578 | 0.372169139523889 | strictly generalized | -2.0641 | 1.0385 | 0.0468583551131427 | 2508 | 0.587067291945035 | ambiguous | -2.7803 | 1.7535 | 0.112836497061352 | 685 | 0.947770881970822 | ambiguous | -1.9169 | 0.7992 | 0.0164613191252412 | 3321 | 0.397051822344973 | ambiguous | -3.0206 | 3.748 | 0.420287156855617 | 174 | 0.924334761040335 | ambiguous
rs864745 | T2D | JAZF1 | 7 | 28147081 | 0.054383252 | 0.028195094 | 0.0537532526174854 | 0 | 29035 | 0.124474037 | 0.038156815 | 0.00110562615313205 | 10001 | 0.139582878824496 | strictly generalized | 0.121632833 | 0.046034201 | 0.00823627060270166 | 5290 | 0.212850246921993 | strictly generalized | 0.153744181 | 0.053789888 | 0.00426003758921887 | 5397 | 0.101825144878293 | strictly generalized | 0.186592379 | 0.061136517 | 0.00227275911424139 | 2964 | 0.049559212837387 | strictly generalized | 0.034764367 | 0.106575335 | 0.744276642391144 | 1399 | 0.858752640821848 | ambiguous
rs10938397 | BMILIN | GNPDA2 | 4 | 44877284 | -0.0034 | 0.0017 | 0.0455002638963584 | 0 | 31346 | -0.0088 | 0.0028 | 0.00167307472215231 | 14383 | 0.0992462603046169 | strictly generalized | -0.0057 | 0.0036 | 0.113345509219526 | 6369 | 0.563456946573946 | ambiguous | 0.0005 | 0.0049 | 0.918724277407713 | 2037 | 0.452081645039464 | ambiguous | -0.0095 | 0.0045 | 0.0347627626222285 | 6125 | 0.204767814121664 | ambiguous | -0.0195 | 0.0139 | 0.160653312395859 | 392 | 0.250264675378902 | ambiguous
rs2967605 | HDL | ANGPTL4 | 19 | 8375738 | -0.9027 | 0.1854 | 1.12202984758004e-06 | 1 | 18933 | -0.8925 | 0.292 | 0.00223932364313623 | 7870 | 0.976474208511046 | strictly generalized | -0.6672 | 0.4322 | 0.122653814875298 | 2585 | 0.61654152365792 | ambiguous | 0.2833 | 0.8591 | 0.741578512990219 | 463 | 0.177193010732422 | ambiguous | -0.3466 | 0.4022 | 0.388819425467823 | 3155 | 0.209239305168855 | ambiguous | 2.4305 | 1.9054 | 0.202102196033678 | 76 | 0.0816623482140734 | ambiguous
rs12779790 | T2D | CDC123;CAMK1D | 10 | 12368016 | 0.019533269 | 0.04021656 | 0.627178370665238 | 0 | 23044 | 0.129460284 | 0.045856591 | 0.00475535110975586 | 10576 | 0.071501946196785 | strictly generalized | 0.158706998 | 0.057300261 | 0.00561005355354974 | 5296 | 0.0468055154950544 | strictly generalized | 0.056466409 | 0.0574178 | 0.325395663256284 | 5368 | 0.598294456432281 | ambiguous | 0.050518416 | 0.079730054 | 0.526329998219695 | 2973 | 0.728603878828667 | ambiguous | 0.128224465 | 0.10944564 | 0.241365200162635 | 1401 | 0.351250736596693 | ambiguous
rs1864163 | HDL | CETP | 16 | 55554734 | -2.0749 | 1.3687 | 0.129528442090217 | 0 | 291 | -2.7905 | 1.0194 | 0.00619279712178711 | 451 | 0.674988920102842 | strictly generalized | -2.9841 | 1.2594 | 0.0178140025032664 | 265 | 0.624962515469165 | ambiguous | -1.8203 | 1.4279 | 0.202376797633204 | 515 | 0.897579272883218 | ambiguous | NA | NA | NA | NA | NA | NA | -1.8813 | 2.4592 | 0.444268638952218 | 76 | 0.945158049199613 | ambiguous
rs2271293 | HDL | LCAT | 16 | 66459571 | 1.4488 | 0.2231 | 8.3615118604572e-11 | 1 | 22733 | 1.1109 | 0.4338 | 0.0104414162724177 | 9490 | 0.4885032167905 | ambiguous | 0.9903 | 0.5192 | 0.0564743124290037 | 3249 | 0.41716158389701 | ambiguous | 1.9774 | 1.9841 | 0.318947462781403 | 720 | 0.791202379215058 | ambiguous | 1.4862 | 0.4163 | 0.000356951767349301 | 3293 | 0.936885613944136 | strictly generalized | -2.7571 | 2.5443 | 0.278525363780885 | 188 | 0.0996096593244773 | ambiguous
rs3890182 | HDL | ABCA1 | 9 | 106687476 | -1.0585 | 0.2098 | 4.52854804565895e-07 | 1 | 23608 | -0.8337 | 0.339 | 0.0139211325723343 | 9682 | 0.572838404074592 | ambiguous | -0.238 | 0.6282 | 0.704791654174602 | 3340 | 0.215400884455939 | ambiguous | 0.7825 | 1.6999 | 0.645285689739883 | 722 | 0.282442056831529 | ambiguous | -0.7655 | 0.9469 | 0.418844526224465 | 3299 | 0.76257255655219 | ambiguous | -0.6182 | 1.9125 | 0.746512103993338 | 188 | 0.81898600119743 | ambiguous
rs1801282 | T2D | PPARG | 3 | 12368125 | 0.086513633 | 0.043068955 | 0.0445664380500846 | 0 | 30254 | 0.259546663 | 0.108960424 | 0.0172176388242997 | 10792 | 0.139715920945683 | ambiguous | 0.038731774 | 0.075402994 | 0.607487199162886 | 5315 | 0.582146537843109 | ambiguous | -0.008005986 | 0.116224206 | 0.945081969524171 | 5416 | 0.445715463364081 | ambiguous | -0.000793149 | 0.089300305 | 0.992913428222267 | 2974 | 0.378529920570178 | ambiguous | 0.08718304 | 0.180490643 | 0.629071898999916 | 1409 | 0.99712161116981 | ambiguous
rs4402960 | T2D | IGF2BP2 | 3 | 186994381 | 0.189236996 | 0.028427561 | 2.79826275534014e-11 | 1 | 31591 | 0.077505413 | 0.032821503 | 0.0182050105269383 | 11266 | 0.0100757312849709 | ambiguous | 0.143889983 | 0.048839757 | 0.00321740714937293 | 5314 | 0.422291873569012 | strictly generalized | 0.168170611 | 0.047252713 | 0.000372323360105376 | 5412 | 0.702446773799411 | strictly generalized | -0.080942775 | 0.076615987 | 0.290751851892219 | 2974 | 0.000945806112831689 | differential | 0.061791521 | 0.093463264 | 0.508527896050396 | 1405 | 0.192036225147864 | ambiguous
rs693 | LDL | APOB | 2 | 21085700 | 3.4503 | 0.3651 | 3.37901015080832e-21 | 1 | 19648 | 1.602 | 0.6906 | 0.0203559219659821 | 8399 | 0.0179782065345338 | ambiguous | 1.3766 | 1.0152 | 0.175102678262487 | 2511 | 0.0545894484188065 | ambiguous | -1.5617 | 4.3352 | 0.718669811321614 | 687 | 0.249305003276091 | ambiguous | 4.7012 | 0.7967 | 3.61653378600016e-09 | 3318 | 0.153475880301907 | strictly generalized | 2.8301 | 5.5423 | 0.609605697796399 | 171 | 0.911092215879018 | ambiguous
rs10830963 | T2D | MTNR1B | 11 | 92348358 | 0.113507669 | 0.042352814 | 0.00736111128948818 | 1 | 18454 | 0.201018216 | 0.087203177 | 0.0211570103703566 | 5608 | 0.366689929971282 | ambiguous | 0.064464794 | 0.129619303 | 0.618949690471917 | 1099 | 0.719109725795685 | ambiguous | -0.435008427 | 0.216716982 | 0.0447214468494255 | 282 | 0.0129903524830596 | ambiguous | 0.323511652 | 0.543249398 | 0.551501136904455 | 96 | 0.699940605698921 | ambiguous | NA | NA | NA | NA | NA | NA
rs4775041 | HDL | LIPC | 15 | 56461987 | 1.3111 | 0.1579 | 1.01210553303696e-16 | 1 | 18886 | 0.7878 | 0.3528 | 0.025549392977593 | 7841 | 0.17577973848903 | ambiguous | 1.3414 | 0.4741 | 0.00466410709758387 | 2586 | 0.951649100978637 | strictly generalized | 1.1605 | 1.164 | 0.318767845990924 | 473 | 0.897984998790258 | ambiguous | 1.3956 | 0.4446 | 0.00169524667115637 | 3171 | 0.857860149678882 | strictly generalized | 0.0032 | 2.3611 | 0.998918626990418 | 76 | 0.580467370443845 | ambiguous
rs1501908 | LDL | TIMD4 | 5 | 156330747 | 1.2336 | 0.4391 | 0.00496365837036772 | 1 | 14113 | 1.3075 | 0.6424 | 0.041817052161798 | 7199 | 0.924337658187664 | ambiguous | 2.3977 | 1.2842 | 0.0618908666012985 | 1801 | 0.391044388549095 | ambiguous | -4.0675 | 2.6175 | 0.120193074215985 | 467 | 0.0457878731242738 | ambiguous | -0.7649 | 1.1862 | 0.5190359083603 | 3165 | 0.114103981470033 | ambiguous | -4.6076 | 6.5108 | 0.479140464959671 | 76 | 0.37072181029054 | ambiguous
[NAME] | LDL | ABCG8; ABCGB | 2 | 43927385 | 2.9818 | 0.4195 | 1.17748758531258e-12 | 1 | 18436 | 1.4889 | 0.7409 | 0.0444753483856364 | 9328 | 0.079528693908874 | ambiguous | 0.0589 | 1.2196 | 0.96148151963919 | 2527 | 0.0234337768034219 | ambiguous | 5.6184 | 2.4177 | 0.020132917151822 | 690 | 0.282604883820649 | ambiguous | 3.2753 | 1.3956 | 0.018931559336737 | 3313 | 0.840384313850033 | ambiguous | 4.3801 | 6.513 | 0.501254936023288 | 173 | 0.830352316544554 | ambiguous
rs6586891 | HDL | LPL | 8 | 19958878 | 0.9593 | 0.1465 | 5.82647761062204e-11 | 1 | 23614 | 0.6028 | 0.3043 | 0.0475980181049388 | 9696 | 0.291159821543359 | ambiguous | 1.2743 | 0.3393 | 0.000172875986680093 | 3357 | 0.394032583258903 | strictly generalized | 1.1592 | 0.8419 | 0.168547615054619 | 725 | 0.81504402572055 | ambiguous | 0.3988 | 0.3591 | 0.26676030196485 | 3295 | 0.148399844373 | ambiguous | -1.6124 | 1.5545 | 0.299620897427679 | 189 | 0.0995456777951606 | ambiguous
rs1111875 | T2D | HHEX/IDE | 10 | 94452862 | 0.042345386 | 0.038565535 | 0.272199636764166 | 0 | 27118 | 0.076032141 | 0.039756353 | 0.0558181657135847 | 10459 | 0.543060016011796 | ambiguous | 0.090064693 | 0.04538667 | 0.0472127752960062 | 5301 | 0.423008107868311 | ambiguous | 0.174510012 | 0.047193875 | 0.000217539636430838 | 5412 | 0.0301199132623657 | strictly generalized | 0.006773106 | 0.056632141 | 0.904801391486936 | 2974 | 0.603635990098302 | ambiguous | 0.09571229 | 0.10185648 | 0.347382770382042 | 1412 | 0.62413694754144 | ambiguous
rs2197089 | logTG | LPL | 8 | 19870653 | -0.039 | 0.005 | 6.1907175439174e-15 | 1 | 22704 | -0.015 | 0.0084 | 0.0741455311114069 | 9115 | 0.0140836575877118 | ambiguous | -0.0475 | 0.0134 | 0.000392946692296263 | 2965 | 0.552308881642464 | strictly generalized | -0.0308 | 0.0287 | 0.283194520050281 | 725 | 0.778346357808726 | ambiguous | -0.058 | 0.0135 | 1.73675412931938e-05 | 3328 | 0.186903621007722 | strictly generalized | -0.0351 | 0.059 | 0.551900120141595 | 189 | 0.947484828457335 | ambiguous
rs7498665 | BMILIN | SH2B1 | 16 | 28790742 | -0.0023 | 0.0019 | 0.226076999133729 | 0 | 31383 | -0.0046 | 0.0027 | 0.0884364558624983 | 13642 | 0.486021911410739 | ambiguous | 0.0001 | 0.0034 | 0.976536189986223 | 6391 | 0.537765564617714 | ambiguous | -0.0185 | 0.0067 | 0.00575904506837665 | 2038 | 0.0200087137150208 | strictly generalized | -0.012 | 0.0039 | 0.00209149266047752 | 6149 | 0.0253551015240706 | strictly generalized | -0.0275 | 0.0145 | 0.0578871272365212 | 392 | 0.0848523109664805 | ambiguous
rs13266634 | T2D | SLC30A8 | 8 | 118253964 | 0.143961243 | 0.03066837 | 2.67746837672533e-06 | 1 | 30415 | 0.114104492 | 0.069052524 | 0.0984468362528963 | 6951 | 0.692726720655625 | ambiguous | 0.079922366 | 0.052316516 | 0.126594520705471 | 5310 | 0.290968763342362 | ambiguous | 0.168645126 | 0.047980882 | 0.000440018914957542 | 4532 | 0.664673274100991 | strictly generalized | 0.108431245 | 0.471878041 | 0.818257607098958 | 160 | 0.940106222654796 | ambiguous | 0.064565464 | 0.087790823 | 0.462067538464521 | 1407 | 0.393227788157643 | ambiguous
rs7578597 | T2D | THADA | 2 | 43586327 | 0.079953723 | 0.044514381 | 0.0724734589906582 | 0 | 30563 | 0.059524549 | 0.037262 | 0.110163240168569 | 11060 | 0.724902658826495 | ambiguous | 0.073638895 | 0.087353262 | 0.399227834704851 | 5314 | 0.948643935590872 | ambiguous | 0.329454205 | 0.205288948 | 0.108530854541877 | 5409 | 0.234928053813368 | ambiguous | 0.62879248 | 0.181852498 | 0.00054479548421614 | 2981 | 0.00337334261315259 | differentially generalized | 0.451876019 | 0.250494722 | 0.0712416083481116 | 1415 | 0.143782782630295 | ambiguous
rs2144300 | HDL | GALNT2 | 1 | 228361539 | 0.5938 | 0.1431 | 3.33135671162915e-05 | 1 | 23331 | 0.4804 | 0.31 | 0.121218960524032 | 9676 | 0.739792613542353 | ambiguous | 0.3925 | 0.3424 | 0.251662731855559 | 3371 | 0.587514689713717 | ambiguous | 0.8356 | 1.0744 | 0.43672442218595 | 722 | 0.823468728608113 | ambiguous | 0.0789 | 0.3569 | 0.82503767364249 | 3288 | 0.180546600532997 | ambiguous | 0.2918 | 1.9925 | 0.88356680225054 | 188 | 0.879834522442762 | ambiguous
rs10838738 | BMILIN | MTCH2 | 11 | 47619625 | -0.0052 | 0.0016 | 0.00115405008478154 | 1 | 34679 | 0.0058 | 0.0041 | 0.157175791714437 | 13653 | 0.0124419748343027 | ambiguous | -0.0076 | 0.0034 | 0.0253980459995365 | 6406 | 0.523021005258222 | ambiguous | -0.0068 | 0.0048 | 0.156580407089635 | 2041 | 0.751829634045849 | ambiguous | 0.0042 | 0.0036 | 0.243345009148763 | 6147 | 0.0170298108341988 | ambiguous | -0.0239 | 0.0149 | 0.108708135289004 | 392 | 0.212082464608883 | ambiguous
rs1748195 | logTG | ANGPTL3 | 1 | 62822181 | 0.033 | 0.0063 | 1.62242338518151e-07 | 1 | 16674 | 0.012 | 0.0091 | 0.18727567478139 | 5895 | 0.0577795711235972 | ambiguous | 0.0363 | 0.0144 | 0.0117077290847464 | 2705 | 0.833704572475203 | ambiguous | 0.073 | 0.0511 | 0.153127451019669 | 253 | 0.437219673986914 | ambiguous | 0.1578 | 0.0701 | 0.0243811104882899 | 132 | 0.0762009747319083 | ambiguous | 0.0817 | 0.0595 | 0.16971838782276 | 113 | 0.415680724981016 | ambiguous
rs2338104 | HDL | [NAME]; [NAME]; MVK/MMAB | 12 | 108379551 | -0.3993 | 0.1442 | 0.00562164288641507 | 1 | 18959 | -0.3535 | 0.2709 | 0.191923645296839 | 7860 | 0.881364296727897 | ambiguous | -0.9228 | 0.378 | 0.0146357142536284 | 2592 | 0.195678046450587 | ambiguous | 0.0278 | 0.9799 | 0.977366858198412 | 472 | 0.666310800509953 | ambiguous | 0.3224 | 0.3741 | 0.388796672780605 | 3128 | 0.0718500323377615 | ambiguous | -1.1855 | 2.375 | 0.617668154360707 | 76 | 0.741080287872702 | ambiguous
[NAME] | T2D | CDKN2A/B | 9 | 22019547 | 0.05363759 | 0.035844156 | 0.134546579880324 | 0 | 22139 | -0.099333218 | 0.078481294 | 0.205623044853578 | 6465 | 0.0762332873484698 | ambiguous | 0.002778194 | 0.096581711 | 0.977051841175355 | 1927 | 0.621524120566054 | ambiguous | -0.034417591 | 0.164302977 | 0.83407638115631 | 873 | 0.600545469489304 | ambiguous | 0.159207949 | 0.345132759 | 0.644587111100023 | 161 | 0.760939783838138 | ambiguous | NA | NA | NA | NA | NA | NA
rs10923931 | T2D | NOTCH2, ADAM30 | 1 | 120319482 | 0.055014586 | 0.04746473 | 0.246430732483124 | 0 | 27300 | 0.043265798 | 0.03598035 | 0.22917603125055 | 10500 | 0.84362632508274 | ambiguous | 0.04257065 | 0.073551599 | 0.562733448310095 | 5316 | 0.88695663648471 | ambiguous | 0.017206458 | 0.14649696 | 0.906501354177624 | 5425 | 0.80605666398929 | ambiguous | 0.078960182 | 0.099664457 | 0.428208977026966 | 2984 | 0.828271793070902 | ambiguous | -0.047722931 | 0.220909023 | 0.828964522658259 | 1413 | 0.64933222789194 | ambiguous
rs7754840 | T2D | CDKAL1 | 6 | 20769229 | 0.143311698 | 0.04090384 | 0.00045897196570342 | 1 | 12906 | 0.050964105 | 0.044046512 | 0.247251114023003 | 5749 | 0.124462750196618 | ambiguous | 0.084488196 | 0.05768106 | 0.142989784438408 | 3375 | 0.405481813634968 | ambiguous | 0.290764816 | 0.047290869 | 7.82513716316109e-10 | 4499 | 0.0183611324861555 | strictly generalized | NA | NA | NA | NA | NA | NA | 0.201839283 | 0.089584215 | 0.0242548935145491 | 1405 | 0.552308201835203 | ambiguous
rs4607103 | T2D | ADAMTS9 | 3 | 64686944 | 0.092732621 | 0.030487588 | 0.00235284046551796 | 1 | 31801 | 0.039070108 | 0.035725453 | 0.27412120606328 | 11304 | 0.253211676855384 | ambiguous | -0.012018157 | 0.047682445 | 0.801005711547206 | 5319 | 0.0641910108923659 | ambiguous | 0.019938042 | 0.044740111 | 0.655856360129358 | 5418 | 0.178769061719073 | ambiguous | -0.046629768 | 0.059292993 | 0.431615816008465 | 2972 | 0.0365936022572548 | ambiguous | -0.114938109 | 0.095141739 | 0.227019414852241 | 1414 | 0.0376507454949962 | ambiguous
rs10402271 | LDL | APOE/APOC; APOE/C1/C4 | 19 | 50021054 | -2.2727 | 0.4921 | 3.86765698439402e-06 | 1 | 11975 | -1.3839 | 1.2829 | 0.280709052328557 | 3774 | 0.517728966647292 | ambiguous | 2.391 | 3.3814 | 0.479502119729795 | 261 | 0.172302066156927 | ambiguous | -4.7734 | 2.6845 | 0.0753818937231466 | 469 | 0.359527724230305 | ambiguous | NA | NA | NA | NA | NA | NA | -6.6755 | 5.9534 | 0.262163574910317 | 76 | 0.461103975456827 | ambiguous
rs4430796 | T2D | TCF2/HNF1B | 17 | 33172153 | 0.084069525 | 0.041048526 | 0.0405548824341926 | 0 | 11343 | 0.047453383 | 0.048067842 | 0.323536348859845 | 5134 | 0.562401571801566 | ambiguous | -0.015692486 | 0.054791007 | 0.77456700017036 | 3301 | 0.145064059446845 | ambiguous | 0.166090544 | 0.049460909 | 0.000785039529034935 | 4410 | 0.201926638052233 | strictly generalized | NA | NA | NA | NA | NA | NA | 0.146342798 | 0.095054837 | 0.123667197682732 | 1400 | 0.547543443163928 | ambiguous
rs2156552 | HDL | [NAME] | 18 | 45435666 | -1.2663 | 0.1928 | 5.10140131304873e-11 | 1 | 18952 | -0.5907 | 0.6178 | 0.339004200043117 | 7855 | 0.296529247221197 | ambiguous | -0.4932 | 0.6819 | 0.469512050116302 | 2575 | 0.275283822963396 | ambiguous | 3.1943 | 1.3357 | 0.0167805925807629 | 470 | 0.000948859533359198 | differential | -1.3394 | 0.9103 | 0.141187551874702 | 3158 | 0.937382228342235 | ambiguous | -2.1713 | 3.3749 | 0.519985854215964 | 75 | 0.788915170024934 | ambiguous
rs12970134 | BMILIN | MC4R | 18 | 56035730 | 0.0077 | 0.0024 | 0.00133506664255911 | 1 | 21987 | 0.0057 | 0.0064 | 0.373130382664481 | 4046 | 0.769825721333562 | ambiguous | -0.0257 | 0.0248 | 0.300066719558712 | 448 | 0.180079039278838 | ambiguous | 0.0253 | 0.0159 | 0.111565704863732 | 696 | 0.273727092958157 | ambiguous | 0.0098 | 0.0442 | 0.824532282565497 | 106 | 0.962161412280611 | ambiguous | NA | NA | NA | NA | NA | NA
rs6102059 | LDL | MAFB | 20 | 38662198 | -0.4152 | 0.52 | 0.42460270419222 | 0 | 11928 | -0.7653 | 0.8802 | 0.384594765031597 | 4429 | 0.732009178320575 | ambiguous | -0.3042 | 1.2186 | 0.802872936490121 | 1710 | 0.93323191537745 | ambiguous | 1.527 | 2.2952 | 0.505857672160291 | 463 | 0.409209727998369 | ambiguous | NA | NA | NA | NA | NA | NA | -0.5151 | 5.1651 | 0.920561053379425 | 74 | 0.984646401724854 | ambiguous
rs4803750 | LDL | BCL3 | 19 | 49939467 | 5.5752 | 0.9202 | 1.37240641788438e-09 | 1 | 12012 | 1.5212 | 1.7704 | 0.390207650542936 | 3793 | 0.0421729089603837 | ambiguous | 5.9468 | 4.6777 | 0.203618902149408 | 261 | 0.937870344050026 | ambiguous | 3.7974 | 3.869 | 0.326349228213484 | 469 | 0.654854232758359 | ambiguous | NA | NA | NA | NA | NA | NA | -1.8572 | 8.0184 | 0.816835284749038 | 75 | 0.357116254235492 | ambiguous
rs471364 | HDL | TTC39B | 9 | 15279578 | 0.3518 | 0.2314 | 0.128432793144689 | 0 | 18089 | 0.2373 | 0.3121 | 0.447055425669345 | 7659 | 0.768220272618839 | ambiguous | -0.2271 | 0.6914 | 0.74256087003029 | 2487 | 0.427196747495286 | ambiguous | 1.2469 | 3.443 | 0.71723613235637 | 468 | 0.795333121662593 | ambiguous | 1.6726 | 1.0615 | 0.115096162984038 | 3139 | 0.224089356881914 | ambiguous | 2.5224 | 4.619 | 0.585002542108204 | 76 | 0.638826655533219 | ambiguous
rs1800961 | HDL | HNF4A | 20 | 42475778 | -1.1444 | 0.4146 | 0.00577569952515534 | 1 | 18046 | -1.005 | 1.4633 | 0.492206375082958 | 7662 | 0.926971204558863 | ambiguous | -2.3312 | 0.9511 | 0.0142437525747094 | 2486 | 0.252680827885446 | ambiguous | -1.3415 | 5.0069 | 0.788753003745325 | 471 | 0.968705895797309 | ambiguous | -1.8947 | 1.0326 | 0.0665230537210332 | 3169 | 0.500126409482549 | ambiguous | -4.4681 | 12.7308 | 0.725612556710504 | 76 | 0.794140963833266 | ambiguous
rs12596776 | HDL | CETP | 16 | 55476849 | -1.3585 | 0.31 | 1.17455564775709e-05 | 1 | 13202 | -0.4753 | 0.6999 | 0.497076394419717 | 5093 | 0.248588125994552 | ambiguous | -0.1327 | 0.7478 | 0.859151900709497 | 2579 | 0.129962138028871 | ambiguous | 0.7666 | 2.9252 | 0.793269363296693 | 472 | 0.470027202427319 | ambiguous | NA | NA | NA | NA | NA | NA | -0.2687 | 2.8447 | 0.92474664910873 | 74 | 0.703319215431885 | ambiguous
rs2237895 | T2D | KCNQ1 | 11 | 2813770 | 0.064376411 | 0.056166099 | 0.251721037592526 | 0 | 5067 | 0.028200408 | 0.064400166 | 0.661463556270927 | 3929 | 0.672040101225888 | ambiguous | 0.194760538 | 0.054901009 | 0.000388927034883926 | 3377 | 0.0969006130044068 | strictly generalized | 0.260639701 | 0.048040883 | 5.78336963140257e-08 | 4520 | 0.00791984372381478 | differentially generalized | NA | NA | NA | NA | NA | NA | 0.256624271 | 0.08917043 | 0.00400322193814552 | 1405 | 0.0681153027074081 | strictly generalized
[NAME] | HDL | CETP | 16 | 55582163 | -0.537 | 0.1641 | 0.00106640519514599 | 1 | 16057 | 0.1565 | 0.3686 | 0.67114324710522 | 5666 | 0.0856501495163703 | ambiguous | -0.4244 | 0.3717 | 0.253545059335265 | 2588 | 0.781682805535701 | ambiguous | 0.9654 | 0.9283 | 0.298355916254765 | 470 | 0.110995994970266 | ambiguous | NA | NA | NA | NA | NA | NA | 3.1072 | 2.0094 | 0.122024349908414 | 75 | 0.0706752302355422 | ambiguous
rs2383208 | T2D | CDKN2A/B | 9 | 22122076 | 0.157212393 | 0.037203036 | 2.38098976198779e-05 | 1 | 30527 | 0.017206225 | 0.041271545 | 0.676749464143494 | 11097 | 0.0117452107066064 | ambiguous | 0.142131742 | 0.062702367 | 0.0234043795371765 | 5313 | 0.836132115406746 | ambiguous | 0.255564912 | 0.044457668 | 9.00385562559763e-09 | 5380 | 0.0897716922295428 | strictly generalized | 0.140514932 | 0.086266036 | 0.103343551513944 | 2964 | 0.858931706039729 | ambiguous | 0.009136945 | 0.099159933 | 0.926584013706376 | 1395 | 0.162072271675967 | ambiguous
rs2815752 | BMILIN | NEGR1 | 1 | 72585028 | 0.0045 | 0.0017 | 0.00811952279075114 | 1 | 28261 | 0.0011 | 0.0027 | 0.68370878740079 | 10576 | 0.286592497229162 | ambiguous | -0.0001 | 0.0058 | 0.986244051172096 | 2891 | 0.446606474070607 | ambiguous | -0.0065 | 0.0083 | 0.43354929020045 | 2041 | 0.194167938450948 | ambiguous | -0.0039 | 0.0046 | 0.396534832588875 | 6153 | 0.0867383870551792 | ambiguous | -0.0035 | 0.0174 | 0.840581735917444 | 392 | 0.64724607379201 | ambiguous
rs7961581 | T2D | TSPAN8/LGR5 | 12 | 69949369 | 0.022112058 | 0.034643389 | 0.523293764500445 | 0 | 18622 | -0.016053965 | 0.047986584 | 0.737963729230791 | 7248 | 0.51901883256305 | ambiguous | 0.10289949 | 0.067401239 | 0.126842941580259 | 3377 | 0.286408403146613 | ambiguous | -0.041968485 | 0.058371073 | 0.472144260421152 | 4533 | 0.345137715687157 | ambiguous | -0.554528626 | 0.115179493 | 1.47588427274195e-06 | 2812 | 1.6325607112195e-06 | differentially generalized | -0.050526335 | 0.096545678 | 0.600736805934562 | 1412 | 0.47884435421614 | ambiguous
rs10010131 | T2D | WFS1 | 4 | 6343816 | 0.049000922 | 0.033008213 | 0.137674477578305 | 0 | 24573 | -0.010669564 | 0.035729078 | 0.765226869820821 | 10085 | 0.219931307426833 | ambiguous | 0.077367517 | 0.049568673 | 0.118567461235864 | 5314 | 0.633844416301435 | ambiguous | 0.355154185 | 0.141508645 | 0.0120809739925452 | 5416 | 0.0351231969844186 | ambiguous | 0.288193053 | 0.088249576 | 0.00109209539950515 | 2977 | 0.0111284825695966 | strictly generalized | 0.083774153 | 0.116413462 | 0.471755304620596 | 1414 | 0.773824565793611 | ambiguous
[NAME] | LDL | HNF1A | 12 | 119873345 | 1.2001 | 0.3943 | 0.00233748945860408 | 1 | 16763 | 0.1487 | 0.9707 | 0.878249688817043 | 7003 | 0.315616740324182 | ambiguous | 2.5755 | 1.1751 | 0.0283991264272746 | 1790 | 0.267149442970504 | ambiguous | -0.5524 | 2.3007 | 0.810252083903588 | 444 | 0.452785938649931 | ambiguous | 1.0924 | 0.7855 | 0.164314428669531 | 3199 | 0.90247283616174 | ambiguous | 7.9521 | 5.443 | 0.144021643099648 | 71 | 0.215994207817706 | ambiguous
rs11206510 | LDL | PCSK9 | 1 | 55268627 | 1.9867 | 0.458 | 1.43933745895598e-05 | 1 | 20524 | 0.0921 | 0.8374 | 0.91242263383256 | 8597 | 0.0471459078206556 | ambiguous | 3.3575 | 1.4396 | 0.0196878025112177 | 2530 | 0.364198276851126 | ambiguous | 6.2158 | 3.9529 | 0.115842568211651 | 682 | 0.287889450293106 | ambiguous | -2.1269 | 1.5963 | 0.182730864254088 | 3328 | 0.0132483797953254 | ambiguous | -4.0321 | 6.3322 | 0.524280327792799 | 174 | 0.343113986983917 | ambiguous
[NAME] | HDL | ABCA1 | 9 | 106687041 | -0.2964 | 0.1882 | 0.115274842868801 | 0 | 13202 | -0.0329 | 0.3456 | 0.924158544034853 | 5103 | 0.503115261843674 | ambiguous | -0.1684 | 0.4004 | 0.674062223801351 | 2478 | 0.772340389450275 | ambiguous | 2.1455 | 0.9643 | 0.0260859376392248 | 472 | 0.0129402114032683 | ambiguous | NA | NA | NA | NA | NA | NA | -0.3791 | 2.1456 | 0.85975411622786 | 76 | 0.96937149412733 | ambiguous
rs7679 | HDL | PLTP | 20 | 44009909 | 0.948 | 0.2128 | 8.39373072952746e-06 | 1 | 15388 | 0.0056 | 0.5801 | 0.992297734626042 | 7877 | 0.127217448534894 | ambiguous | 0.8863 | 0.5968 | 0.137520744523106 | 2597 | 0.922425079940136 | ambiguous | -2.8652 | 4.7341 | 0.545028899557256 | 513 | 0.421014377584994 | ambiguous | -0.4105 | 0.7485 | 0.583396548914591 | 3163 | 0.0808491087323345 | ambiguous | -5.994 | 4.3874 | 0.171880909302964 | 77 | 0.114015192089514 | ambiguous