Spreadsheet: 60c5b338-a706-41f5-8904-727b142d576b
Sheet: Table S2

Table S2. Function prediction of lincRNAs affected by eQTLs using GeneNetwork
lincRNA genes | ProbeName | Ensembl gene ID of lincRNA | Affymetrix probe ID | SNP assoicated with disease/trait | GWAS Trait/Disease | [NAME] predicted GO molecular function | P-value for prediction
[NAME] | 670494 | ENSG00000246582 | 244886_at | rs13278062 | Exudative age-related macular degeneration | cysteine-type endopeptidase activator activity involved in apoptotsis | 1.28e-08
XLOC_010202 | 3140138 | ENSG00000234608 | 1553987_at,212868_x_at | rs6490294 | Mean platelet volume | Adenylate [NAME] | 0.00176
XLOC_009878 | 2470347 | ENSG00000185847 | 230195_at | rs10849915 | Alcohol consumption | Structural constituent of muscle | 3.83e-29
[NAME] | 940184 | ENSG00000235565 | 233281_at | rs7542900 | Type 2 diabetes | Olfactor receptor activity | 0.00653
XLOC_001197 | 5080201 | ENSG00000198468 | 235126_at |  |  | oxidoreductase activity | 0.000171
XLOC_002997 | 3060341 | ENSG00000242086 | 229820_at,232047_at |  |  | neuropeptidase receptor activity | 0.00797
XLOC_014192 | 430438 | MIAT | 228658_at,227168_at,237322_at |  |  | gamma-tubulin binding | 0.00121
[NAME] | 870551 | ENSG00000237753 | 230452_at |  |  | cell adhesion molecule binding | 0.00114
[NAME] | 3800358 | HCG27 | 1559050_at |  |  | Protein kinase C activity | 0.00411
MEG3 | 3360113 | MEG3 | 212732_at,210794_s_at,227390_at,226210_s_at,229557_at,226211_at |  |  | platelet-derived growth factor binding | 0.000142
XLOC_009983 | 6660112 | ENSG00000256862 | 244798_at |  |  | cysteine-type endopeptidase activator activity involved in apoptic process | 1.28e-08
XLOC_003853 | 6960288 | ENSG00000244459 | 1558890_at |  |  | cyclin-dependent protein kinase activity | 0.00257
XLOC_007858 | 3180468 | ENSG00000234771 | 1560089_at |  |  | p53 binding | 0.00251
XLOC_001379 | 7570474 | ENSG00000228784 | 232664_at |  |  | dipeptidase activity | 0.000289
XLOC_010236 | 6840348 | ENSG00000184992 | 231810_at,225716_at |  |  | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 2.15e-06
[NAME] | 5220427 | ENSG00000215458 | 1563088_a_at |  |  | apoptotic protease activator activity | 0.000141
XLOC_014431 | 5960541 | ENSG00000204625 | 208287_at |  |  | Structural constituent of eye lens | 0.000186
XLOC_001257 | 4010270 | ENSG00000233461 | 237564_at,237563_s_at,1570243_at |  |  | Sulfate transmembrane transporter activity | 0.000349
XLOC_009627 | 4890097 | ENSG00000256146 | 233398_at |  |  | taste receptor activity | 0.00169
XLOC_012505 | 6130152 | ENSG00000257574 | 243441_at |  |  | oxidoreductase activity | 0.000285
XLOC_000643 | 3450086 | ENSG00000227953 | 230541_at |  |  | acid-thiol ligase activity | 0.00192
XLOC_006516 | 3850026 | ENSG00000182165 | 210886_x_at,210241_s_at,209917_s_at |  |  | cysteine-type endopeptidase regulator activity involved in apoptotic process | 3.48e-07
[NAME] | 3060044 | ENSG00000215447 | 1569032_at,1559957_a_at |  |  | Omega peptidase activity | 0.0038
XLOC_013508 | 1770215 | ENSG00000183566 | 1555554_at |  |  | cysteine-type endopeptidase inhibitor activity | 0.00122
XLOC_009897 | 1710477 | ENSG00000196668 | 237591_at,1563369_at |  |  | steroid hydroxylase activity | 0.0163
XLOC_007475 | 4920333 | ENSG00000175611 | 1557788_a_at,227893_at |  |  | ATP dependent [NAME] helicase activity | 0.00463
XLOC_001265 | 3520215 | ENSG00000238005 | 236398_s_at,1570285_at,236399_at |  |  | lipase inhibitor activity | 0.0129
XLOC_010017 | 3940064 | ENSG00000256667 | 207229_at |  |  | taste receptor activity | 6.27e-07
[NAME] | 4480762 | ENSG00000236094 | 239781_at |  |  | acetylcholine-activated cation-selective channel activity | 3.69e-05
XLOC_005602 | 3780373 | ENSG00000183674 | 244829_at |  |  | copper ion binding | 5.82e-09
XLOC_000818 | 6290722 | ENSG00000224863 | 1568938_at |  |  | ribonuclease activity | 0.0171
XLOC_004309 | 3130279 | ENSG00000249662 | 244269_at |  |  | epidermal growth factor receptor binding | 0.0154
XLOC_006277 | 4860746 | ENSG00000257743 | 216666_at |  |  | UDP-galactosyltransferase activity | 0.000124
XLOC_008863 | 4570100 | ENSG00000224596 | 1563745_a_at |  |  | nucleobase-containing compound transmembrane transporter activity | 0.000279
XLOC_000909 | 5870196 | ENSG00000231999 | 242038_at,231313_at |  |  | activating transcription factor binding | 0.00762
XLOC_014388 | 2030242 | ENSG00000229891 | 229930_at |  |  | GTPase activator acctivity | 0.000764
XLOC_003904 | 4290767 | [NAME] | 210473_s_at,1555122_at |  |  | [NAME] receptor protein kinase activity | 1.23e-07
XLOC_002175 | 1580180 | ENSG00000234877 | 243663_at |  |  | olfactory receptor activity | 3.59e-05
[NAME] | 1410138 | ENSG00000247225 | 1559131_a_at |  |  | organic cation trnasmembrane transporter activity | 4.12e-05
XLOC_013489 | 5220750 | ENSG00000230387 | 231089_at |  |  | exopeptidase activity | 0.00156
XLOC_007606 | 4730717 | ENSG00000226308 | 1568848_at |  |  | protein phosphataase inhibitor activity | 0.00186
XLOC_006683 | 3360576 | ENSG00000254269 | 241449_at |  |  | G-protein coupled amine receptor activity | 0.0157
XLOC_013657 | 2570170 | ENSG00000233048 | 1561678_at |  |  | olfactory receptor activity | 0.00101