Spreadsheet: 784dda51-21b2-49df-ac1a-eff0c505b52d
Sheet: Sheet1

Table S6. Duplicated Region SNPs in Francisella tularensis subsp. [NAME] WY96 vs Schu S4 Duplicated Regions | Unnamed: 1 | Unnamed: 2 | Unnamed: 3 | Unnamed: 4 | Unnamed: 5 | Unnamed: 6 | Unnamed: 7 | Unnamed: 8 | Unnamed: 9 | Unnamed: 10 | Unnamed: 11 | Unnamed: 12 | Unnamed: 13 | Unnamed: 14 | Unnamed: 15 | Unnamed: 16 | Unnamed: 17 | Unnamed: 18
 |  | Schu S4 | Schu S4 | WY96 | Schu S4 | WY96 | Schu S4 | WY96 | Schu S4 DR | WY96 | AA |  | WY96 |  |  |  | WY96 | WY96
SNP ID | SNP Type | DR | DR pos | pos | DR nuc | nuc | DR AA | AA | AA Properties | AA Properties | Change Type | Type | Locus Tag | Product | Gene | Strand | Feature Start | Feature End
DR1-SNP1 | nSNP | Schu4-DR1 | 33827 | 27254 | C | A | K | N | polar, hydrophilic, charged (+) | polar, hydrophilic, neutral | Non-Conservative | CDS | FTW_0033 | transposase ISFtu1(programmed frameshift) | N\A | template | 27236 | 27565
DR1-SNP2 | sSNP | Schu4-DR1 | 33800 | 27281 | G | A | N | N | polar, hydrophilic, neutral | polar, hydrophilic, neutral | Conservative | CDS | FTW_0033 | transposase ISFtu1(programmed frameshift) | N\A | template | 27236 | 27565
DR1-SNP3 | nSNP | Schu4-DR1 | 33275 | 27806 | A | G | L | P | aliphatic, hydrophobic, neutral | hydrophobic, neutral | Non-Conservative | CDS | FTW_0033 | transposase ISFtu1(programmed frameshift) | N\A | template | 27565 | 28116
DR1-SNP4 | nSNP | Schu4-DR1 | 33262 | 27819 | G | A | R | W | polar, hydrophilic, charged (+) | aromatic, hydrophobic, neutral | Non-Conservative | CDS | FTW_0033 | transposase ISFtu1(programmed frameshift) | N\A | template | 27565 | 28116
DR1-SNP5 | nSNP | Schu4-DR1 | 33094 | 27987 | G | A | L | F | aliphatic, hydrophobic, neutral | aromatic, hydrophobic, neutral | Non-Conservative | CDS | FTW_0033 | transposase ISFtu1(programmed frameshift) | N\A | template | 27565 | 28116
DR1-SNP6 | nSNP | Schu4-DR1 | 33062 | 28019 | T | C | * | W | Stop | aromatic, hydrophobic, neutral | UnStop | CDS | FTW_0033 | transposase ISFtu1(programmed frameshift) | N\A | template | 27565 | 28116
DR1-SNP7 | sSNP | Schu4-DR1 | 32976 | 28105 | A | G | Y | Y | aromatic, polar, hydrophobic | aromatic, polar, hydrophobic | Conservative | CDS | FTW_0033 | transposase ISFtu1(programmed frameshift) | N\A | template | 27565 | 28116
DR1-SNP8 | sSNP | Schu4-DR1 | 32725 | 28356 | T | C | F | F | aromatic, hydrophobic, neutral | aromatic, hydrophobic, neutral | Conservative | Gene | FTW_0035 | Putative membrane transporter |  | template
DR1-SNP9 | nSNP | Schu4-DR1 | 32429 | 28652 | A | C | Y | S | aromatic, polar, hydrophobic | polar, hydrophilic, neutral | Non-Conservative | Gene | FTW_0035 | Putative membrane transporter |  | template
DR1-SNP10 | pINDEL | Schu4-DR1 | 32236 | 28844 | G | . |  |  |  | Frameshift disruption | [NAME] | Gene | FTW_0035 | Putative membrane transporter |  | template
DR1-SNP11 | nSNP | Schu4-DR1 | 31779 | 29301 | A | C | Y | * | aromatic, polar, hydrophobic | Stop | Stop | CDS | FTW_0036 | conserved hypothetical protein |  | template
DR1-SNP12 | sSNP | Schu4-DR1 | 31353 | 29727 | A | C | R | R | polar, hydrophilic, charged (+) | polar, hydrophilic, charged (+) | Conservative | CDS | FTW_0036 | conserved hypothetical protein |  | template
DR1-SNP13 | iSNP | Schu4-DR1 | 30729 | 30351 | C | T |  |  |  |  | Intergenic
DR1-SNP14 | nSNP | Schu4-DR1 | 30688 | 30392 | G | A | R | * | polar, hydrophilic, charged (+) | Stop | Stop | CDS | FTW_0037 | pathogenicity determinant protein D, pdpD | pdpD1 | template | 30375 | 33962
DR1-SNP15 | nSNP | Schu4-DR1 | 29641 | 31439 | T | A | I | F | aliphatic, hydrophobic, neutral | aromatic, hydrophobic, neutral | Non-Conservative | CDS | FTW_0037 | pathogenicity determinant protein D, pdpD | pdpD1 | template | 30375 | 33962
DR1-SNP16 | nSNP | Schu4-DR1 | 29020 | 32060 | T | C | R | G | polar, hydrophilic, charged (+) | aliphatic, neutral | Non-Conservative | CDS | FTW_0037 | pathogenicity determinant protein D, pdpD | pdpD1 | template | 30375 | 33962
DR1-SNP17 | sSNP | Schu4-DR1 | 27777 | 33303 | G | A | G | G | aliphatic, neutral | aliphatic, neutral | Conservative | CDS | FTW_0037 | pathogenicity determinant protein D, pdpD | pdpD1 | template | 30375 | 33962
DR1-SNP18 | sSNP | Schu4-DR1 | 26555 | 34525 | G | A | L | L | aliphatic, hydrophobic, neutral | aliphatic, hydrophobic, neutral | Conservative | CDS | FTW_0038 | intracellular growth locus, igl A | iglA1 | template | 34043 | 34597
DR1-SNP19 | nSNP | Schu4-DR1 | 25444 | 35636 | G | A | R | C | polar, hydrophilic, charged (+) | sulfur-containing, polar, hydrophobic, neutral | Non-Conservative | CDS | FTW_0039 | intracellular growth locus B, IglB | iglB1 | template | 34611 | 36131
DR1-SNP20 | sSNP | Schu4-DR1 | 25086 | 35994 | C | T | L | L | aliphatic, hydrophobic, neutral | aliphatic, hydrophobic, neutral | Conservative | CDS | FTW_0039 | intracellular growth locus B, IglB | iglB1 | template | 34611 | 36131
DR1-SNP21 | nSNP | Schu4-DR1 | 24771 | 36309 | A | C | W | G | aromatic, hydrophobic, neutral | aliphatic, neutral | Non-Conservative | CDS | FTW_0040 | intracellular growth locus iglC | iglC1 | template | 36142 | 36777
DR1-SNP22 | nSNP | Schu4-DR1 | 24417 | 36663 | T | A | I | L | aliphatic, hydrophobic, neutral | aliphatic, hydrophobic, neutral | Conservative | CDS | FTW_0040 | intracellular growth locus iglC | iglC1 | template | 36142 | 36777
DR1-SNP23 | nSNP | Schu4-DR1 | 24372 | 36708 | A | G | F | L | aromatic, hydrophobic, neutral | aliphatic, hydrophobic, neutral | Non-Conservative | CDS | FTW_0040 | intracellular growth locus iglC | iglC1 | template | 36142 | 36777
DR1-SNP24 | nSNP | Schu4-DR1 | 23636 | 37444 | T | G | Y | S | aromatic, polar, hydrophobic | polar, hydrophilic, neutral | Non-Conservative | CDS | FTW_0041 | intracellular growth locus iglD | iglD1 | template | 36798 | 37994
DR1-SNP25 | nSNP | Schu4-DR1 | 23043 | 38037 | C | T | P | S | hydrophobic, neutral | polar, hydrophilic, neutral | Non-Conservative | CDS | FTW_0042 | hypothetical protein | N\A | complement | 38001 | 38576
DR1-SNP26 | nSNP | Schu4-DR1 | 22583 | 38497 | T | C | I | T | aliphatic, hydrophobic, neutral | polar, hydrophilic, neutral | Non-Conservative | CDS | FTW_0042 | hypothetical protein | N\A | complement | 38001 | 38576
DR1-SNP27 | nSNP | Schu4-DR1 | 22136 | 38944 | C | A | N | K | polar, hydrophilic, neutral | polar, hydrophilic, charged (+) | Non-Conservative | CDS | FTW_0043 | pathogenicity determinant protein pdpC | pdpC1 | complement | 38594 | 42580
DR1-SNP28 | nSNP | Schu4-DR1 | 21662 | 39418 | G | A | M | I | sulfur-containing, hydrophobic, neutral | aliphatic, hydrophobic, neutral | Non-Conservative | CDS | FTW_0043 | pathogenicity determinant protein pdpC | pdpC1 | complement | 38594 | 42580
DR1-SNP29 | nSNP | Schu4-DR1 | 21111 | 39969 | A | C | Y | S | aromatic, polar, hydrophobic | polar, hydrophilic, neutral | Non-Conservative | CDS | FTW_0043 | pathogenicity determinant protein pdpC | pdpC1 | complement | 38594 | 42580
DR1-SNP30 | nSNP | Schu4-DR1 | 21063 | 40017 | A | G | H | R | aromatic, polar, hydrophilic, charged (+) | polar, hydrophilic, charged (+) | Non-Conservative | CDS | FTW_0043 | pathogenicity determinant protein pdpC | pdpC1 | complement | 38594 | 42580
DR1-SNP31 | nSNP | Schu4-DR1 | 20092 | 40988 | T | C | F | L | aromatic, hydrophobic, neutral | aliphatic, hydrophobic, neutral | Non-Conservative | CDS | FTW_0043 | pathogenicity determinant protein pdpC | pdpC1 | complement | 38594 | 42580
DR1-SNP32 | nSNP | Schu4-DR1 | 19466 | 41614 | T | G | N | K | polar, hydrophilic, neutral | polar, hydrophilic, charged (+) | Non-Conservative | CDS | FTW_0043 | pathogenicity determinant protein pdpC | pdpC1 | complement | 38594 | 42580
DR1-SNP33 | sSNP | Schu4-DR1 | 19370 | 41710 | G | A | * | * | Stop | Stop | Conservative Stop | CDS | FTW_0043 | pathogenicity determinant protein pdpC | pdpC1 | complement | 38594 | 42580
DR1-SNP34 | nSNP | Schu4-DR1 | 19285 | 41795 | C | T | R | * | polar, hydrophilic, charged (+) | Stop | Stop | CDS | FTW_0043 | pathogenicity determinant protein pdpC | pdpC1 | complement | 38594 | 42580
DR1-SNP35 | nSNP | Schu4-DR1 | 18680 | 42400 | G | T | E | D | polar, hydrophilic, charged (-) | polar, hydrophilic, charged (-) | Conservative | CDS | FTW_0043 | pathogenicity determinant protein pdpC | pdpC1 | complement | 38594 | 42580
DR1-SNP36 | nSNP | Schu4-DR1 | 18663 | 42417 | G | A | C | Y | sulfur-containing, polar, hydrophobic, neutral | aromatic, polar, hydrophobic | Non-Conservative | CDS | FTW_0043 | pathogenicity determinant protein pdpC | pdpC1 | complement | 38594 | 42580
DR1-SNP37 | nSNP | Schu4-DR1 | 18004 | 43076 | G | A | D | N | polar, hydrophilic, charged (-) | polar, hydrophilic, neutral | Non-Conservative | CDS | FTW_0044 | hypothetical protein | N\A | complement | 42620 | 43336
DR1-SNP38 | sSNP | Schu4-DR1 | 16987 | 44093 | G | A | * | * | Stop | Stop | Conservative Stop | CDS | FTW_0045 | hypothetical protein | N\A | complement | 43359 | 44510
DR1-SNP39 | sSNP | Schu4-DR1 | 15676 | 45404 | C | T | H | H | aromatic, polar, hydrophilic, charged (+) | aromatic, polar, hydrophilic, charged (+) | Conservative | CDS | FTW_0047 | hypothetical protein | N\A | complement | 45168 | 46598
DR1-SNP40 | sSNP | Schu4-DR1 | 15172 | 45908 | C | T | T | T | polar, hydrophilic, neutral | polar, hydrophilic, neutral | Conservative | CDS | FTW_0047 | hypothetical protein | N\A | complement | 45168 | 46598
DR1-SNP41 | nSNP | Schu4-DR1 | 14669 | 46411 | G | A | S | N | polar, hydrophilic, neutral | polar, hydrophilic, neutral | Conservative | CDS | FTW_0047 | hypothetical protein | N\A | complement | 45168 | 46598
DR1-SNP42 | sSNP | Schu4-DR1 | 14641 | 46439 | A | G | S | S | polar, hydrophilic, neutral | polar, hydrophilic, neutral | Conservative | CDS | FTW_0047 | hypothetical protein | N\A | complement | 45168 | 46598
DR1-SNP43 | nSNP | Schu4-DR1 | 14602 | 46478 | G | A | M | I | sulfur-containing, hydrophobic, neutral | aliphatic, hydrophobic, neutral | Non-Conservative | CDS | FTW_0047 | hypothetical protein | N\A | complement | 45168 | 46598
DR1-SNP44 | nSNP | Schu4-DR1 | 13788 | 47292 | A | G | S | G | polar, hydrophilic, neutral | aliphatic, neutral | Non-Conservative | CDS | FTW_0049 | hypothetical protein | N\A | complement | 47133 | 48863
DR1-SNP45 | sSNP | Schu4-DR1 | 13324 | 47756 | C | T | S | S | polar, hydrophilic, neutral | polar, hydrophilic, neutral | Conservative | CDS | FTW_0049 | hypothetical protein | N\A | complement | 47133 | 48863
DR1-SNP46 | nSNP | Schu4-DR1 | 12857 | 48223 | A | C | N | T | polar, hydrophilic, neutral | polar, hydrophilic, neutral | Conservative | CDS | FTW_0049 | hypothetical protein | N\A | complement | 47133 | 48863
DR1-SNP47 | sSNP | Schu4-DR1 | 11832 | 49248 | A | T | I | I | aliphatic, hydrophobic, neutral | aliphatic, hydrophobic, neutral | Conservative | CDS | FTW_0050 | hypothetical protein | N\A | complement | 48868 | 49362
DR1-SNP48 | nSNP | Schu4-DR1 | 11828 | 49252 | T | G | S | A | polar, hydrophilic, neutral | aliphatic, hydrophobic, neutral | Non-Conservative | CDS | FTW_0050 | hypothetical protein | N\A | complement | 48868 | 49362
DR1-SNP49 | nSNP | Schu4-DR1 | 11827 | 49253 | C | A | T | N | polar, hydrophilic, neutral | polar, hydrophilic, neutral | Conservative | CDS | FTW_0050 | hypothetical protein | N\A | complement | 48868 | 49362
DR1-SNP50 | sSNP | Schu4-DR1 | 10019 | 51061 | G | A | R | R | polar, hydrophilic, charged (+) | polar, hydrophilic, charged (+) | Conservative | CDS | FTW_0052 | pathogenicity deteminant protein pdpB1 | pdpB1 | complement | 49742 | 53023
DR1-SNP51 | sSNP | Schu4-DR1 | 10004 | 51076 | A | G | S | S | polar, hydrophilic, neutral | polar, hydrophilic, neutral | Conservative | CDS | FTW_0052 | pathogenicity deteminant protein pdpB1 | pdpB1 | complement | 49742 | 53023
DR1-SNP52 | nSNP | Schu4-DR1 | 9292 | 51788 | G | T | V | L | aliphatic, hydrophobic, neutral | aliphatic, hydrophobic, neutral | Conservative | CDS | FTW_0052 | pathogenicity deteminant protein pdpB1 | pdpB1 | complement | 49742 | 53023
DR1-SNP53 | nSNP | Schu4-DR1 | 8836 | 52244 | C | A | Q | K | polar, hydrophilic, neutral | polar, hydrophilic, charged (+) | Non-Conservative | CDS | FTW_0052 | pathogenicity deteminant protein pdpB1 | pdpB1 | complement | 49742 | 53023
DR1-SNP54 | nSNP | Schu4-DR1 | 8779 | 52301 | C | T | H | Y | aromatic, polar, hydrophilic, charged (+) | aromatic, polar, hydrophobic | Non-Conservative | CDS | FTW_0052 | pathogenicity deteminant protein pdpB1 | pdpB1 | complement | 49742 | 53023
DR1-SNP55 | nSNP | Schu4-DR1 | 8748 | 52332 | G | T | W | L | aromatic, hydrophobic, neutral | aliphatic, hydrophobic, neutral | Non-Conservative | CDS | FTW_0052 | pathogenicity deteminant protein pdpB1 | pdpB1 | complement | 49742 | 53023
DR1-SNP56 | sSNP | Schu4-DR1 | 8474 | 52606 | A | G | P | P | hydrophobic, neutral | hydrophobic, neutral | Conservative | CDS | FTW_0052 | pathogenicity deteminant protein pdpB1 | pdpB1 | complement | 49742 | 53023
DR1-SNP57 | sSNP | Schu4-DR1 | 7096 | 53984 | G | A | L | L | aliphatic, hydrophobic, neutral | aliphatic, hydrophobic, neutral | Conservative | CDS | FTW_0053 | pathogenicity deteminant protein pdpA1 | pdpA1 | complement | 53028 | 55490
DR1-SNP58 | rSNP | Schu4-DR1 | 5093 | 55987 | G | A |  |  |  |  | Ribosomal SNP | Gene | FTW_2069 | 16S_rRNA |  | template
DR1-SNP59 | rSNP | Schu4-DR1 | 2472 | 58609 | T | C |  |  |  |  | Ribosomal SNP | Gene | FTW_2066 | 23S_rRNA |  | template
DR1-SNP60 | rSNP | Schu4-DR1 | 1222 | 59859 | C | T |  |  |  |  | Ribosomal SNP | Gene | FTW_2066 | 23S_rRNA |  | template
DR1-SNP61 | iSNP | Schu4-DR1 | 194 | 60887 | C | A |  |  |  |  | Intergenic | Gene
DR2-SNP1 | nSNP | Schu4-DR2 | 33827 | 516967 | C | A | K | N | polar, hydrophilic, charged (+) | polar, hydrophilic, neutral | Non-Conservative | CDS | FTW_0530 | transposase ISFtu1 (programmed frameshift) | N\A | template | 516949 | 517278
DR2-SNP2 | sSNP | Schu4-DR2 | 33800 | 516994 | G | A | N | N | polar, hydrophilic, neutral | polar, hydrophilic, neutral | Conservative | CDS | FTW_0530 | transposase ISFtu1 (programmed frameshift) | N\A | template | 516949 | 517278
[NAME] | nSNP | Schu4-DR2 | 33275 | 517519 | A | G | L | P | aliphatic, hydrophobic, neutral | hydrophobic, neutral | Non-Conservative | CDS | FTW_0530 | transposase ISFtu1 (programmed frameshift) | N\A | template | 517278 | 517829
DR2-SNP4 | nSNP | Schu4-DR2 | 33262 | 517532 | G | A | R | W | polar, hydrophilic, charged (+) | aromatic, hydrophobic, neutral | Non-Conservative | CDS | FTW_0530 | transposase ISFtu1 (programmed frameshift) | N\A | template | 517278 | 517829
DR2-SNP5 | nSNP | Schu4-DR2 | 33094 | 517700 | G | A | L | F | aliphatic, hydrophobic, neutral | aromatic, hydrophobic, neutral | Non-Conservative | CDS | FTW_0530 | transposase ISFtu1 (programmed frameshift) | N\A | template | 517278 | 517829
DR2-SNP6 | nSNP | Schu4-DR2 | 33062 | 517732 | T | C | * | W | Stop | aromatic, hydrophobic, neutral | UnStop | CDS | FTW_0530 | transposase ISFtu1 (programmed frameshift) | N\A | template | 517278 | 517829
DR2-SNP7 | sSNP | Schu4-DR2 | 32976 | 517818 | A | G | Y | Y | aromatic, polar, hydrophobic | aromatic, polar, hydrophobic | Conservative | CDS | FTW_0530 | transposase ISFtu1 (programmed frameshift) | N\A | template | 517278 | 517829
DR2-SNP8 | sSNP | Schu4-DR2 | 32725 | 518069 | T | C | F | F | aromatic, hydrophobic, neutral | aromatic, hydrophobic, neutral | Intergenic | Gene | FTW_0532 | major facilitator family transporter |  | template
DR2-SNP9 | nSNP | Schu4-DR2 | 32429 | 518365 | A | C | Y | S | aromatic, polar, hydrophobic | polar, hydrophilic, neutral | Non-Conservative | Gene | FTW_0532 | major facilitator family transporter |  | template
DR2-SNP10 | pINDEL | Schu4-DR2 | 32236 | 518557 | G | . |  |  |  | Frameshift disruption | [NAME] | Gene | FTW_0532 | major facilitator family transporter |  | template
DR2-SNP11 | nSNP | Schu4-DR2 | 31779 | 519014 | A | C | Y | * | aromatic, polar, hydrophobic | Stop | Stop | CDS | FTW_0533 | conserved hypothetical protein | N\A | template | 518843 | 519856
DR2-SNP12 | sSNP | Schu4-DR2 | 31353 | 519440 | A | C | R | R | polar, hydrophilic, charged (+) | polar, hydrophilic, charged (+) | Conservative | CDS | FTW_0533 | conserved hypothetical protein | N\A | template | 518843 | 519856
DR2-SNP13 | iSNP | Schu4-DR2 | 30729 | 520064 | C | T |  |  |  |  | Intergenic
DR2-SNP14 | nSNP | Schu4-DR2 | 30688 | 520105 | G | A | R | * | polar, hydrophilic, charged (+) | Stop | Stop | CDS | [NAME] | pathogenicity determinant protein D, pdpD | pdpD2 | template | 520088 | 523675
DR2-SNP15 | nSNP | Schu4-DR2 | 29641 | 521152 | T | A | I | F | aliphatic, hydrophobic, neutral | aromatic, hydrophobic, neutral | Non-Conservative | CDS | [NAME] | pathogenicity determinant protein D, pdpD | pdpD2 | template | 520088 | 523675
DR2-SNP16 | nSNP | Schu4-DR2 | 29020 | 521773 | T | C | R | G | polar, hydrophilic, charged (+) | aliphatic, neutral | Non-Conservative | CDS | [NAME] | pathogenicity determinant protein D, pdpD | pdpD2 | template | 520088 | 523675
DR2-SNP17 | sSNP | Schu4-DR2 | 27777 | 523016 | G | A | G | G | aliphatic, neutral | aliphatic, neutral | Conservative | CDS | [NAME] | pathogenicity determinant protein D, pdpD | pdpD2 | template | 520088 | 523675
DR2-SNP18 | sSNP | Schu4-DR2 | 26555 | 524238 | G | A | L | L | aliphatic, hydrophobic, neutral | aliphatic, hydrophobic, neutral | Conservative | CDS | FTW_0535 | intracellular growth locus, iglA | iglA2 | template | 523756 | 524310
DR2-SNP19 | nSNP | Schu4-DR2 | 25444 | 525349 | G | A | R | C | polar, hydrophilic, charged (+) | sulfur-containing, polar, hydrophobic, neutral | Non-Conservative | CDS | FTW_0536 | intracellular growth locus iglB | iglB2 | template | 524324 | 525844
DR2-SNP20 | sSNP | Schu4-DR2 | 25086 | 525707 | C | T | L | L | aliphatic, hydrophobic, neutral | aliphatic, hydrophobic, neutral | Conservative | CDS | FTW_0536 | intracellular growth locus iglB | iglB2 | template | 524324 | 525844
DR2-SNP21 | nSNP | Schu4-DR2 | 24771 | 526022 | A | C | W | G | aromatic, hydrophobic, neutral | aliphatic, neutral | Non-Conservative | CDS | FTW_0537 | Intracellular growth locus iglC | iglC2 | template | 525855 | 526490
DR2-SNP22 | nSNP | Schu4-DR2 | 24417 | 526376 | T | A | I | L | aliphatic, hydrophobic, neutral | aliphatic, hydrophobic, neutral | Conservative | CDS | FTW_0537 | Intracellular growth locus iglC | iglC2 | template | 525855 | 526490
DR2-SNP23 | nSNP | Schu4-DR2 | 24372 | 526421 | A | G | F | L | aromatic, hydrophobic, neutral | aliphatic, hydrophobic, neutral | Non-Conservative | CDS | FTW_0537 | Intracellular growth locus iglC | iglC2 | template | 525855 | 526490
DR2-SNP24 | nSNP | Schu4-DR2 | 23636 | 527157 | T | G | Y | S | aromatic, polar, hydrophobic | polar, hydrophilic, neutral | Non-Conservative | CDS | FTW_0538 | intracellular growth locus iglD | iglD2 | template | 526511 | 527707
DR2-SNP25 | nSNP | Schu4-DR2 | 23043 | 527750 | C | T | P | S | hydrophobic, neutral | polar, hydrophilic, neutral | Non-Conservative | CDS | FTW_0539 | hypothetical protein | N\A | complement | 527714 | 528289
DR2-SNP26 | nSNP | Schu4-DR2 | 22583 | 528210 | T | C | I | T | aliphatic, hydrophobic, neutral | polar, hydrophilic, neutral | Non-Conservative | CDS | FTW_0539 | hypothetical protein | N\A | complement | 527714 | 528289
DR2-SNP27 | nSNP | Schu4-DR2 | 22136 | 528657 | C | A | N | K | polar, hydrophilic, neutral | polar, hydrophilic, charged (+) | Non-Conservative | CDS | FTW_0540 | pathogenicity determinant protein pdpC2 | pdpC2 | complement | 528307 | 532293
DR2-SNP28 | nSNP | Schu4-DR2 | 21662 | 529131 | G | A | M | I | sulfur-containing, hydrophobic, neutral | aliphatic, hydrophobic, neutral | Non-Conservative | CDS | FTW_0540 | pathogenicity determinant protein pdpC2 | pdpC2 | complement | 528307 | 532293
DR2-SNP29 | nSNP | Schu4-DR2 | 21111 | 529682 | A | C | Y | S | aromatic, polar, hydrophobic | polar, hydrophilic, neutral | Non-Conservative | CDS | FTW_0540 | pathogenicity determinant protein pdpC2 | pdpC2 | complement | 528307 | 532293
DR2-SNP30 | nSNP | Schu4-DR2 | 21063 | 529730 | A | G | H | R | aromatic, polar, hydrophilic, charged (+) | polar, hydrophilic, charged (+) | Non-Conservative | CDS | FTW_0540 | pathogenicity determinant protein pdpC2 | pdpC2 | complement | 528307 | 532293
DR2-SNP31 | nSNP | Schu4-DR2 | 20092 | 530701 | T | C | F | L | aromatic, hydrophobic, neutral | aliphatic, hydrophobic, neutral | Non-Conservative | CDS | FTW_0540 | pathogenicity determinant protein pdpC2 | pdpC2 | complement | 528307 | 532293
DR2-SNP32 | nSNP | Schu4-DR2 | 19466 | 531327 | T | G | N | K | polar, hydrophilic, neutral | polar, hydrophilic, charged (+) | Non-Conservative | CDS | FTW_0540 | pathogenicity determinant protein pdpC2 | pdpC2 | complement | 528307 | 532293
DR2-SNP33 | sSNP | Schu4-DR2 | 19370 | 531423 | G | A | * | * | Stop | Stop | Conservative Stop | CDS | FTW_0540 | pathogenicity determinant protein pdpC2 | pdpC2 | complement | 528307 | 532293
DR2-SNP34 | nSNP | Schu4-DR2 | 19285 | 531508 | C | T | R | * | polar, hydrophilic, charged (+) | Stop | Stop | CDS | FTW_0540 | pathogenicity determinant protein pdpC2 | pdpC2 | complement | 528307 | 532293
DR2-SNP35 | nSNP | Schu4-DR2 | 18680 | 532113 | G | T | E | D | polar, hydrophilic, charged (-) | polar, hydrophilic, charged (-) | Conservative | CDS | FTW_0540 | pathogenicity determinant protein pdpC2 | pdpC2 | complement | 528307 | 532293
DR2-SNP36 | nSNP | Schu4-DR2 | 18663 | 532130 | G | A | C | Y | sulfur-containing, polar, hydrophobic, neutral | aromatic, polar, hydrophobic | Non-Conservative | CDS | FTW_0540 | pathogenicity determinant protein pdpC2 | pdpC2 | complement | 528307 | 532293
DR2-SNP37 | nSNP | Schu4-DR2 | 18004 | 532789 | G | A | D | N | polar, hydrophilic, charged (-) | polar, hydrophilic, neutral | Non-Conservative | CDS | FTW_0541 | hypothetical protein | N\A | complement | 532333 | 533049
DR2-SNP38 | sSNP | Schu4-DR2 | 16987 | 533806 | G | A | * | * | Stop | Stop | Conservative Stop | CDS | FTW_0542 | hypothetical protein | N\A | complement | 533072 | 534223
DR2-SNP39 | sSNP | Schu4-DR2 | 15676 | 535117 | C | T | H | H | aromatic, polar, hydrophilic, charged (+) | aromatic, polar, hydrophilic, charged (+) | Conservative | CDS | FTW_0544 | hypothetical protein | N\A | complement | 534881 | 536311
DR2-SNP40 | sSNP | Schu4-DR2 | 15172 | 535621 | C | T | T | T | polar, hydrophilic, neutral | polar, hydrophilic, neutral | Conservative | CDS | FTW_0544 | hypothetical protein | N\A | complement | 534881 | 536311
DR2-SNP41 | nSNP | Schu4-DR2 | 14669 | 536124 | G | A | S | N | polar, hydrophilic, neutral | polar, hydrophilic, neutral | Conservative | CDS | FTW_0544 | hypothetical protein | N\A | complement | 534881 | 536311
DR2-SNP42 | sSNP | Schu4-DR2 | 14641 | 536152 | A | G | S | S | polar, hydrophilic, neutral | polar, hydrophilic, neutral | Conservative | CDS | FTW_0544 | hypothetical protein | N\A | complement | 534881 | 536311
DR2-SNP43 | nSNP | Schu4-DR2 | 14602 | 536191 | G | A | M | I | sulfur-containing, hydrophobic, neutral | aliphatic, hydrophobic, neutral | Non-Conservative | CDS | FTW_0544 | hypothetical protein | N\A | complement | 534881 | 536311
DR2-SNP44 | nSNP | Schu4-DR2 | 13788 | 537005 | A | G | S | G | polar, hydrophilic, neutral | aliphatic, neutral | Non-Conservative | CDS | FTW_0546 | hypothetical protein | N\A | complement | 536846 | 538576
DR2-SNP45 | sSNP | Schu4-DR2 | 13324 | 537469 | C | T | S | S | polar, hydrophilic, neutral | polar, hydrophilic, neutral | Conservative | CDS | FTW_0546 | hypothetical protein | N\A | complement | 536846 | 538576
DR2-SNP46 | nSNP | Schu4-DR2 | 12857 | 537936 | A | C | N | T | polar, hydrophilic, neutral | polar, hydrophilic, neutral | Conservative | CDS | FTW_0546 | hypothetical protein | N\A | complement | 536846 | 538576
DR2-SNP47 | sSNP | Schu4-DR2 | 11832 | 538961 | A | T | I | I | aliphatic, hydrophobic, neutral | aliphatic, hydrophobic, neutral | Conservative | CDS | FTW_0547 | hypothetical protein | N\A | complement | 538581 | 539075
DR2-SNP48 | nSNP | Schu4-DR2 | 11828 | 538965 | T | G | S | A | polar, hydrophilic, neutral | aliphatic, hydrophobic, neutral | Non-Conservative | CDS | FTW_0547 | hypothetical protein | N\A | complement | 538581 | 539075
DR2-SNP49 | nSNP | Schu4-DR2 | 11827 | 538966 | C | A | T | N | polar, hydrophilic, neutral | polar, hydrophilic, neutral | Conservative | CDS | FTW_0547 | hypothetical protein | N\A | complement | 538581 | 539075
DR2-SNP50 | sSNP | Schu4-DR2 | 10019 | 540774 | G | A | R | R | polar, hydrophilic, charged (+) | polar, hydrophilic, charged (+) | Conservative | CDS | FTW_0549 | pathogenicity determinant protein pdpB2 | pdpB2 | complement | 539455 | 542736
DR2-SNP51 | sSNP | Schu4-DR2 | 10004 | 540789 | A | G | S | S | polar, hydrophilic, neutral | polar, hydrophilic, neutral | Conservative | CDS | FTW_0549 | pathogenicity determinant protein pdpB2 | pdpB2 | complement | 539455 | 542736
DR2-SNP52 | nSNP | Schu4-DR2 | 9292 | 541501 | G | T | V | L | aliphatic, hydrophobic, neutral | aliphatic, hydrophobic, neutral | Conservative | CDS | FTW_0549 | pathogenicity determinant protein pdpB2 | pdpB2 | complement | 539455 | 542736
DR2-SNP53 | nSNP | Schu4-DR2 | 8836 | 541957 | C | A | Q | K | polar, hydrophilic, neutral | polar, hydrophilic, charged (+) | Non-Conservative | CDS | FTW_0549 | pathogenicity determinant protein pdpB2 | pdpB2 | complement | 539455 | 542736
DR2-SNP54 | nSNP | Schu4-DR2 | 8779 | 542014 | C | T | H | Y | aromatic, polar, hydrophilic, charged (+) | aromatic, polar, hydrophobic | Non-Conservative | CDS | FTW_0549 | pathogenicity determinant protein pdpB2 | pdpB2 | complement | 539455 | 542736
DR2-SNP55 | nSNP | Schu4-DR2 | 8748 | 542045 | G | T | W | L | aromatic, hydrophobic, neutral | aliphatic, hydrophobic, neutral | Non-Conservative | CDS | FTW_0549 | pathogenicity determinant protein pdpB2 | pdpB2 | complement | 539455 | 542736
DR2-SNP56 | sSNP | Schu4-DR2 | 8474 | 542319 | A | G | P | P | hydrophobic, neutral | hydrophobic, neutral | Conservative | CDS | FTW_0549 | pathogenicity determinant protein pdpB2 | pdpB2 | complement | 539455 | 542736
DR2-SNP57 | sSNP | Schu4-DR2 | 7096 | 543697 | G | A | L | L | aliphatic, hydrophobic, neutral | aliphatic, hydrophobic, neutral | Conservative | CDS | FTW_0550 | pathogenicity determinant protein, pdpA | pdpA2 | complement | 542741 | 545203
DR2-SNP58 | rSNP | Schu4-DR2 | 5093 | 545700 | G | A |  |  |  |  | Ribosomal SNP | Gene | FTW_2070 | 16S_rRNA |  | template
DR2-SNP59 | rSNP | Schu4-DR2 | 2472 | 548322 | T | C |  |  |  |  | Ribosomal SNP | Gene | FTW_2067 | 23S_rRNA |  | template
DR2-SNP60 | rSNP | Schu4-DR2 | 1222 | 549572 | C | T |  |  |  |  | Ribosomal SNP | Gene | FTW_2067 | 23S_rRNA |  | template
DR3-SNP1 | rSNP | [NAME] | 4887 | 735315 | G | A |  |  |  |  | Ribosomal SNP | Gene | FTW_2071 | 16S_rRNA |  | template
[NAME] | rSNP | [NAME] | 4812 | 735390 | G | C |  |  |  |  | Ribosomal SNP | Gene | FTW_2071 | 16S_rRNA |  | template
[NAME] | rSNP | [NAME] | 4811 | 735391 | C | G |  |  |  |  | Ribosomal SNP | Gene | FTW_2071 | 16S_rRNA |  | template
DR3-SNP4 | rSNP | [NAME] | 4163 | 736040 | G | C |  |  |  |  | Ribosomal SNP | Gene | FTW_2071 | 16S_rRNA |  | template
[NAME] | rSNP | [NAME] | 4162 | 736041 | C | G |  |  |  |  | Ribosomal SNP | Gene | FTW_2071 | 16S_rRNA |  | template
DR3-SNP6 | rSNP | [NAME] | 3525 | 736677 | A | . |  |  |  |  | Ribosomal INDEL | Gene | FTW_2071 | 16S_rRNA |  | template
DR3-SNP7 | rSNP | [NAME] | 2265 | 737937 | T | C |  |  |  |  | Ribosomal SNP | Gene | FTW_2068 | 23S_rRNA |  | template
DR3-SNP8 | rSNP | [NAME] | 1015 | 739187 | C | T |  |  |  |  | Ribosomal SNP | Gene | FTW_2068 | 23S_rRNA |  | template