Spreadsheet: 7c2d8a8a-5dce-42b1-89cf-429c83395319
Sheet: Table-S9

Table S9. Distribution of DRGs in metabolic pathways among the nine clusters
[NAME] | RiceCyc | D | NE | E | NED | NEU | ED | EU | DD | DU
deoxyribose phosphate degradation | 4 | 3 | 1 | 2 | 1 | 0 | 0 | 2 | 1 | 2
13-LOX and 13-HPL pathway | 15 | 7 | 0 | 7 | 0 | 0 | 3 | 4 | 3 | 4
2-keto glutarate dehydrogenase complex | 8 | 1 | 0 | 1 | 0 | 0 | 1 | 0 | 1 | 0
4-hydroxyproline degradation I | 15 | 6 | 2 | 4 | 0 | 2 | 3 | 1 | 3 | 3
abscisic acid biosynthesis | 1 | 1 | 0 | 1 | 0 | 0 | 1 | 0 | 1 | 0
acetyl CoA fermentation to butyrate | 9 | 4 | 1 | 3 | 1 | 0 | 1 | 2 | 2 | 2
acyl-ACP thioesterase pathway | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1
aerobic respiration -- electron donor II | 107 | 6 | 2 | 4 | 2 | 0 | 2 | 2 | 4 | 2
aerobic respiration -- electron donor III | 54 | 4 | 1 | 3 | 1 | 0 | 1 | 2 | 2 | 2
aerobic respiration -- electron donors reaction list | 36 | 6 | 2 | 4 | 2 | 0 | 2 | 2 | 4 | 2
alanine biosynthesis II | 4 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0
alanine degradation III | 4 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0
aminopropanol biosynthesis | 12 | 4 | 2 | 2 | 1 | 1 | 1 | 1 | 2 | 2
ammonia assimilation cycle II | 5 | 3 | 0 | 3 | 0 | 0 | 3 | 0 | 3 | 0
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside) | 9 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1
arginine biosynthesis I | 9 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1
arginine biosynthesis II (acetyl cycle) | 18 | 2 | 0 | 2 | 0 | 0 | 1 | 1 | 1 | 1
arginine biosynthesis IV | 6 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1
arginine degradation I (arginase pathway) | 17 | 7 | 2 | 5 | 0 | 2 | 3 | 2 | 3 | 4
arginine degradation II | 9 | 3 | 1 | 2 | 0 | 1 | 1 | 1 | 1 | 2
arginine degradation III (arginine decarboxylase/agmatinase pathway) | 4 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1
arginine degradation IV (arginine decarboxylase/agmatine deiminase pathway) | 5 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1
arginine degradation VI (arginase 2 pathway) | 3 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1
ascorbate biosynthesis | 16 | 2 | 0 | 2 | 0 | 0 | 0 | 2 | 0 | 2
ascorbate glutathione cycle | 12 | 3 | 2 | 1 | 1 | 1 | 0 | 1 | 1 | 2
asparagine biosynthesis I | 8 | 2 | 1 | 1 | 1 | 0 | 0 | 1 | 1 | 1
asparagine biosynthesis III | 3 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1
asparagine degradation I | 15 | 2 | 1 | 1 | 1 | 0 | 1 | 0 | 2 | 0
asparagine degradation II | 10 | 1 | 0 | 1 | 0 | 0 | 1 | 0 | 1 | 0
aspartate biosynthesis I | 5 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0
aspartate degradation II | 14 | 6 | 2 | 4 | 2 | 0 | 3 | 1 | 5 | 1
beta-alanine betaine biosynthesis | 20 | 4 | 1 | 3 | 1 | 0 | 1 | 2 | 2 | 2
beta-alanine biosynthesis II | 12 | 7 | 1 | 6 | 0 | 1 | 1 | 5 | 1 | 6
beta-D-glucuronide degradation | 4 | 2 | 0 | 2 | 0 | 0 | 1 | 1 | 1 | 1
betanidin degradation | 189 | 41 | 19 | 22 | 15 | 4 | 11 | 11 | 26 | 15
[NAME] biosynthesis I | 14 | 4 | 1 | 3 | 1 | 0 | 1 | 2 | 2 | 2
biotin biosynthesis II | 14 | 4 | 1 | 3 | 1 | 0 | 1 | 2 | 2 | 2
branched-chain alpha-keto acid dehydrogenase complex | 23 | 3 | 1 | 2 | 1 | 0 | 1 | 1 | 2 | 1
brassinosteroid biosynthesis II | 93 | 37 | 10 | 27 | 3 | 7 | 17 | 10 | 20 | 17
Calvin cycle | 73 | 20 | 9 | 11 | 6 | 3 | 6 | 5 | 12 | 8
cardiolipin biosynthesis | 12 | 2 | 1 | 1 | 1 | 0 | 1 | 0 | 2 | 0
carnitine degradation III | 5 | 3 | 0 | 3 | 0 | 0 | 2 | 1 | 2 | 1
cellulose biosynthesis | 30 | 9 | 2 | 7 | 2 | 0 | 6 | 1 | 8 | 1
chlorophyll a biosynthesis II | 1 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0
chlorophyllide a biosynthesis | 32 | 12 | 4 | 8 | 1 | 3 | 5 | 3 | 6 | 6
cholesterol biosynthesis I | 5 | 2 | 1 | 1 | 0 | 1 | 0 | 1 | 0 | 2
cholesterol biosynthesis II (via 24,25-dihydrolanosterol) | 5 | 2 | 1 | 1 | 0 | 1 | 0 | 1 | 0 | 2
cholesterol biosynthesis III (via desmosterol) | 5 | 2 | 1 | 1 | 0 | 1 | 0 | 1 | 0 | 2
choline biosynthesis I | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1
choline biosynthesis III | 15 | 4 | 1 | 3 | 0 | 1 | 0 | 3 | 0 | 4
chorismate biosynthesis | 36 | 9 | 4 | 5 | 2 | 2 | 2 | 3 | 4 | 5
citrulline biosynthesis | 20 | 6 | 2 | 4 | 0 | 2 | 0 | 4 | 0 | 6
citrulline degradation | 4 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1
CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) | 2 | 1 | 0 | 1 | 0 | 0 | 1 | 0 | 1 | 0
coenzyme A biosynthesis | 7 | 1 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 1
coumarin biosynthesis (via 2-coumarate) | 1 | 1 | 0 | 1 | 0 | 0 | 1 | 0 | 1 | 0
cyanate degradation | 59 | 4 | 1 | 3 | 0 | 1 | 2 | 1 | 2 | 2
cyclopropane and cyclopropene fatty acid biosynthesis | 9 | 3 | 0 | 3 | 0 | 0 | 2 | 1 | 2 | 1
cyclopropane fatty acid (CFA) biosynthesis | 9 | 3 | 0 | 3 | 0 | 0 | 2 | 1 | 2 | 1
cysteine biosynthesis I | 22 | 10 | 3 | 7 | 1 | 2 | 5 | 2 | 6 | 4
cytokinins 7-N-glucoside biosynthesis | 162 | 13 | 4 | 9 | 1 | 3 | 4 | 5 | 5 | 8
cytokinins 9-N-glucoside biosynthesis | 162 | 13 | 4 | 9 | 1 | 3 | 4 | 5 | 5 | 8
cytokinins degradation | 9 | 2 | 1 | 1 | 0 | 1 | 0 | 1 | 0 | 2
cytokinins-O-glucoside biosynthesis | 162 | 13 | 4 | 9 | 1 | 3 | 4 | 5 | 5 | 8
de novo biosynthesis of pyrimidine deoxyribonucleotides | 21 | 5 | 3 | 2 | 3 | 0 | 2 | 0 | 5 | 0
de novo biosynthesis of pyrimidine ribonucleotides | 28 | 8 | 1 | 7 | 1 | 0 | 3 | 4 | 4 | 4
DIMBOA-glucoside degradation | 7 | 3 | 1 | 2 | 1 | 0 | 2 | 0 | 3 | 0
divinyl ether biosynthesis II (13-LOX) | 15 | 7 | 0 | 7 | 0 | 0 | 3 | 4 | 3 | 4
D-lactate fermentation to propionate and acetate | 11 | 6 | 1 | 5 | 0 | 1 | 1 | 4 | 1 | 5
dTDP-L-rhamnose biosynthesis I | 36 | 14 | 3 | 11 | 3 | 0 | 4 | 7 | 7 | 7
enterobactin biosynthesis | 86 | 15 | 6 | 9 | 4 | 2 | 4 | 5 | 8 | 7
ent-kaurene biosynthesis | 6 | 1 | 0 | 1 | 0 | 0 | 1 | 0 | 1 | 0
epicuticular wax biosynthesis | 12 | 2 | 0 | 2 | 0 | 0 | 2 | 0 | 2 | 0
ethanol fermentation to acetate | 64 | 14 | 5 | 9 | 4 | 1 | 5 | 4 | 9 | 5
ethylene biosynthesis from methionine | 32 | 6 | 3 | 3 | 2 | 1 | 1 | 2 | 3 | 3
ethylene glycol degradation | 9 | 3 | 1 | 2 | 0 | 1 | 1 | 1 | 1 | 2
fatty acid  elongation -- unsaturated II | 22 | 8 | 3 | 5 | 1 | 2 | 5 | 0 | 6 | 2
fatty acid beta-oxidation I | 28 | 11 | 1 | 10 | 0 | 1 | 5 | 5 | 5 | 6
fatty acid beta-oxidation II (plant, saturated) | 17 | 7 | 0 | 7 | 0 | 0 | 4 | 3 | 4 | 3
fatty acid beta-oxidation IV (plant, unsaturated, even number) | 7 | 2 | 0 | 2 | 0 | 0 | 1 | 1 | 1 | 1
fatty acid biosynthesis - initial steps | 26 | 8 | 3 | 5 | 1 | 2 | 5 | 0 | 6 | 2
fatty acid elongation -- saturated | 28 | 10 | 5 | 5 | 3 | 2 | 5 | 0 | 8 | 2
flavin biosynthesis | 9 | 2 | 0 | 2 | 0 | 0 | 1 | 1 | 1 | 1
flavonoid biosynthesis | 17 | 6 | 2 | 4 | 2 | 0 | 3 | 1 | 5 | 1
flavonol biosynthesis | 1 | 1 | 0 | 1 | 0 | 0 | 1 | 0 | 1 | 0
folate polyglutamylation I | 12 | 6 | 0 | 6 | 0 | 0 | 4 | 2 | 4 | 2
folate polyglutamylation II | 4 | 1 | 0 | 1 | 0 | 0 | 1 | 0 | 1 | 0
folate transformations | 16 | 6 | 0 | 6 | 0 | 0 | 4 | 2 | 4 | 2
[NAME] biosynthesis I | 19 | 7 | 0 | 7 | 0 | 0 | 5 | 2 | 5 | 2
[NAME] biosynthesis II | 17 | 7 | 0 | 7 | 0 | 0 | 5 | 2 | 5 | 2
fructan biosynthesis | 2 | 1 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 1
fructan degradation | 2 | 1 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 1
fructose degradation to pyruvate and lactate (anaerobic) | 117 | 34 | 12 | 22 | 9 | 3 | 16 | 6 | 25 | 9
galactose degradation II | 56 | 22 | 2 | 20 | 1 | 1 | 10 | 10 | 11 | 11
galactosylcyclitol biosynthesis | 6 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1
gallate degradation III (anaerobic) | 7 | 2 | 0 | 2 | 0 | 0 | 1 | 1 | 1 | 1
gamma-glutamyl cycle | 34 | 6 | 0 | 6 | 0 | 0 | 1 | 5 | 1 | 5
GDP-D-rhamnose biosynthesis | 12 | 8 | 2 | 6 | 1 | 1 | 1 | 5 | 2 | 6
GDP-L-fucose biosynthesis I (from GDP-D-mannose) | 13 | 8 | 2 | 6 | 1 | 1 | 1 | 5 | 2 | 6
GDP-mannose metabolism | 9 | 2 | 0 | 2 | 0 | 0 | 1 | 1 | 1 | 1
geranyldiphosphate biosynthesis | 15 | 2 | 0 | 2 | 0 | 0 | 1 | 1 | 1 | 1
geranylgeranyldiphosphate biosynthesis II (plastidic) | 21 | 3 | 0 | 3 | 0 | 0 | 2 | 1 | 2 | 1
[NAME] biosynthesis I (non [NAME], non C-13 hydroxylation) | 2 | 1 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 1
[NAME] biosynthesis II (early C-3 hydroxylation) | 2 | 1 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 1
[NAME] biosynthesis III (early C-13 hydroxylation) | 8 | 1 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 1
[NAME] inactivation | 3 | 2 | 0 | 2 | 0 | 0 | 0 | 2 | 0 | 2
gluconeogenesis | 80 | 28 | 8 | 20 | 5 | 3 | 13 | 7 | 18 | 10
glucose fermentation to lactate II | 93 | 31 | 13 | 18 | 7 | 6 | 14 | 4 | 21 | 10
glutamate biosynthesis I | 5 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0
glutamate degradation III | 10 | 3 | 0 | 3 | 0 | 0 | 0 | 3 | 0 | 3
glutamate degradation VII (to butyrate) | 8 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1
glutamine biosynthesis I | 5 | 3 | 0 | 3 | 0 | 0 | 3 | 0 | 3 | 0
glutamine degradation III | 10 | 2 | 2 | 0 | 2 | 0 | 0 | 0 | 2 | 0
glutaryl-CoA degradation | 9 | 4 | 1 | 3 | 1 | 0 | 1 | 2 | 2 | 2
glutathione biosynthesis | 5 | 2 | 1 | 1 | 1 | 0 | 1 | 0 | 2 | 0
glutathione redox reactions I | 7 | 1 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 1
glutathione-mediated detoxification | 47 | 6 | 3 | 3 | 2 | 1 | 2 | 1 | 4 | 2
glycerol degradation I | 24 | 5 | 3 | 2 | 2 | 1 | 1 | 1 | 3 | 2
glycerol degradation IV | 11 | 2 | 0 | 2 | 0 | 0 | 1 | 1 | 1 | 1
glycine betaine degradation | 11 | 4 | 0 | 4 | 0 | 0 | 2 | 2 | 2 | 2
glycine biosynthesis I | 7 | 4 | 0 | 4 | 0 | 0 | 2 | 2 | 2 | 2
glycine cleavage complex | 11 | 4 | 0 | 4 | 0 | 0 | 4 | 0 | 4 | 0
glycogen biosynthesis I (from ADP-D-Glucose) | 21 | 8 | 2 | 6 | 1 | 1 | 3 | 3 | 4 | 4
glycolipid biosynthesis | 12 | 4 | 3 | 1 | 2 | 1 | 0 | 1 | 2 | 2
glycolipid desaturation | 8 | 4 | 1 | 3 | 1 | 0 | 2 | 1 | 3 | 1
glycolysis I | 113 | 32 | 12 | 20 | 9 | 3 | 13 | 7 | 22 | 10
glycolysis IV (plant cytosol) | 104 | 28 | 11 | 17 | 8 | 3 | 12 | 5 | 20 | 8
heme biosynthesis II | 15 | 6 | 0 | 6 | 0 | 0 | 5 | 1 | 5 | 1
histidine biosynthesis I | 24 | 6 | 2 | 4 | 1 | 1 | 2 | 2 | 3 | 3
homocysteine and cysteine interconversion | 13 | 6 | 1 | 5 | 0 | 1 | 2 | 3 | 2 | 4
homocysteine degradation | 4 | 2 | 0 | 2 | 0 | 0 | 2 | 0 | 2 | 0
homogalacturonan degradation | 138 | 25 | 11 | 14 | 8 | 3 | 3 | 11 | 11 | 14
homoserine biosynthesis | 10 | 2 | 0 | 2 | 0 | 0 | 2 | 0 | 2 | 0
isoleucine biosynthesis from threonine | 25 | 7 | 3 | 4 | 2 | 1 | 1 | 3 | 3 | 4
isoleucine degradation I | 14 | 4 | 1 | 3 | 0 | 1 | 2 | 1 | 2 | 2
isoleucine degradation II | 62 | 12 | 5 | 7 | 3 | 2 | 5 | 2 | 8 | 4
[NAME] biosynthesis | 42 | 13 | 1 | 12 | 1 | 0 | 4 | 8 | 5 | 8
L-cysteine degradation I | 3 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0
leucine biosynthesis | 17 | 6 | 2 | 4 | 0 | 2 | 1 | 3 | 1 | 5
leucine degradation I | 11 | 4 | 1 | 3 | 0 | 1 | 1 | 2 | 1 | 3
leucine degradation III | 66 | 13 | 5 | 8 | 3 | 2 | 5 | 3 | 8 | 5
linamarin degradation | 1 | 1 | 0 | 1 | 0 | 0 | 1 | 0 | 1 | 0
lipid-independent phytate biosynthesis | 2 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1
lysine biosynthesis I | 22 | 6 | 0 | 6 | 0 | 0 | 6 | 0 | 6 | 0
lysine biosynthesis II | 22 | 6 | 0 | 6 | 0 | 0 | 6 | 0 | 6 | 0
lysine biosynthesis IV | 4 | 2 | 0 | 2 | 0 | 0 | 0 | 2 | 0 | 2
lysine biosynthesis VI | 22 | 6 | 0 | 6 | 0 | 0 | 6 | 0 | 6 | 0
lysine degradation I | 4 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1
lysine degradation II | 10 | 2 | 1 | 1 | 0 | 1 | 0 | 1 | 0 | 2
maackiain biosynthesis | 4 | 2 | 2 | 0 | 1 | 1 | 0 | 0 | 1 | 1
mannose degradation | 6 | 2 | 0 | 2 | 0 | 0 | 1 | 1 | 1 | 1
medicarpin biosynthesis | 4 | 2 | 2 | 0 | 1 | 1 | 0 | 0 | 1 | 1
methionine biosynthesis I | 12 | 5 | 1 | 4 | 0 | 1 | 1 | 3 | 1 | 4
methionine biosynthesis II | 27 | 6 | 1 | 5 | 0 | 1 | 2 | 3 | 2 | 4
methionine degradation I (to homocysteine) | 8 | 3 | 1 | 2 | 1 | 0 | 2 | 0 | 3 | 0
methionine degradation II | 2 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1
methionine degradation III | 55 | 10 | 4 | 6 | 3 | 1 | 4 | 2 | 7 | 3
methionine salvage pathway | 34 | 6 | 3 | 3 | 2 | 1 | 1 | 2 | 3 | 3
methylerythritol phosphate pathway | 12 | 5 | 3 | 2 | 1 | 2 | 2 | 0 | 3 | 2
methylglyoxal degradation I | 12 | 6 | 0 | 6 | 0 | 0 | 3 | 3 | 3 | 3
mevalonate degradation | 6 | 2 | 0 | 2 | 0 | 0 | 0 | 2 | 0 | 2
mevalonate pathway | 20 | 8 | 2 | 6 | 1 | 1 | 2 | 4 | 3 | 5
mixed acid fermentation | 84 | 19 | 7 | 12 | 6 | 1 | 9 | 3 | 15 | 4
momilactone biosynthesis | 5 | 2 | 0 | 2 | 0 | 0 | 1 | 1 | 1 | 1
myo-inositol biosynthesis | 2 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1
NAD biosynthesis I (from aspartate) | 4 | 1 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 1
NAD salvage pathway I | 3 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1
NAD salvage pathway II | 29 | 9 | 5 | 4 | 4 | 1 | 2 | 2 | 6 | 3
NAD/NADH phosphorylation and dephosphorylation | 31 | 4 | 2 | 2 | 2 | 0 | 1 | 1 | 3 | 1
nicotine degradation II | 8 | 1 | 0 | 1 | 0 | 0 | 1 | 0 | 1 | 0
nitrate reduction II (assimilatory) | 5 | 3 | 0 | 3 | 0 | 0 | 3 | 0 | 3 | 0
O-antigen biosynthesis | 3 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1
ornithine biosynthesis | 8 | 1 | 0 | 1 | 0 | 0 | 1 | 0 | 1 | 0
oxidative ethanol degradation I | 57 | 10 | 4 | 6 | 3 | 1 | 4 | 2 | 7 | 3
oxidative ethanol degradation III | 10 | 4 | 3 | 1 | 1 | 2 | 1 | 0 | 2 | 2
pantothenate biosynthesis I | 12 | 2 | 1 | 1 | 0 | 1 | 1 | 0 | 1 | 1
pantothenate biosynthesis II | 12 | 2 | 1 | 1 | 0 | 1 | 1 | 0 | 1 | 1
pentose phosphate pathway (non-oxidative branch) | 11 | 7 | 4 | 3 | 2 | 2 | 2 | 1 | 4 | 3
pentose phosphate pathway (oxidative branch) | 20 | 3 | 1 | 2 | 1 | 0 | 1 | 1 | 2 | 1
pentose phosphate pathway (partial) | 4 | 3 | 1 | 2 | 1 | 0 | 1 | 1 | 2 | 1
peptidoglycan biosynthesis I | 5 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0
phenylalanine biosynthesis I | 21 | 6 | 2 | 4 | 0 | 2 | 2 | 2 | 2 | 4
phenylalanine degradation III | 61 | 13 | 5 | 8 | 3 | 2 | 4 | 4 | 7 | 6
phenylpropanoid biosynthesis | 19 | 6 | 2 | 4 | 2 | 0 | 3 | 1 | 5 | 1
phenylpropanoid biosynthesis, initial reactions | 9 | 1 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 1
phospholipases | 38 | 9 | 2 | 7 | 1 | 1 | 2 | 5 | 3 | 6
phospholipid biosynthesis I | 36 | 5 | 1 | 4 | 1 | 0 | 1 | 3 | 2 | 3
phospholipid biosynthesis II | 34 | 6 | 1 | 5 | 1 | 0 | 2 | 3 | 3 | 3
phospholipid desaturation | 8 | 4 | 1 | 3 | 1 | 0 | 2 | 1 | 3 | 1
photorespiration | 26 | 10 | 1 | 9 | 0 | 1 | 7 | 2 | 7 | 3
phytyl-PP biosynthesis | 1 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0
pinobanksin biosynthesis | 3 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0
plastoquinone biosynthesis | 4 | 2 | 1 | 1 | 0 | 1 | 1 | 0 | 1 | 1
polyisoprenoid biosynthesis | 20 | 5 | 1 | 4 | 1 | 0 | 3 | 1 | 4 | 1
ppGpp biosynthesis | 4 | 3 | 0 | 3 | 0 | 0 | 0 | 3 | 0 | 3
proanthocyanidin biosynthesis from flavanols | 1 | 1 | 0 | 1 | 0 | 0 | 1 | 0 | 1 | 0
proline biosynthesis I | 16 | 5 | 2 | 3 | 0 | 2 | 0 | 3 | 0 | 5
proline biosynthesis II | 16 | 5 | 2 | 3 | 0 | 2 | 0 | 3 | 0 | 5
proline biosynthesis V (from arginine) | 5 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1
proline degradation I | 16 | 6 | 2 | 4 | 0 | 2 | 3 | 1 | 3 | 3
proline degradation II | 16 | 6 | 2 | 4 | 0 | 2 | 3 | 1 | 3 | 3
PRPP biosynthesis I | 4 | 2 | 1 | 1 | 0 | 1 | 0 | 1 | 0 | 2
purine degradation | 11 | 5 | 2 | 3 | 2 | 0 | 1 | 2 | 3 | 2
purine nucleotides de novo biosynthesis I | 59 | 15 | 4 | 11 | 3 | 1 | 10 | 1 | 13 | 2
purine nucleotides de novo biosynthesis II | 40 | 8 | 3 | 5 | 3 | 0 | 5 | 0 | 8 | 0
putrescine biosynthesis I | 4 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1
putrescine biosynthesis II | 5 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1
[NAME] cycling (plants) | 3 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1
pyridoxal 5'-phosphate biosynthesis | 6 | 2 | 2 | 0 | 1 | 1 | 0 | 0 | 1 | 1
pyridoxal 5'-phosphate salvage pathway | 4 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0
pyruvate dehydrogenase complex | 8 | 2 | 0 | 2 | 0 | 0 | 1 | 1 | 1 | 1
reductive TCA cycle I | 29 | 9 | 1 | 8 | 1 | 0 | 4 | 4 | 5 | 4
removal of superoxide radicals | 75 | 6 | 3 | 3 | 1 | 2 | 3 | 0 | 4 | 2
respiration (anaerobic) | 61 | 20 | 6 | 14 | 4 | 2 | 7 | 7 | 11 | 9
respiration (anaerobic)-- electron donors reaction list | 38 | 6 | 2 | 4 | 2 | 0 | 2 | 2 | 4 | 2
ribose degradation | 13 | 2 | 1 | 1 | 0 | 1 | 1 | 0 | 1 | 1
S-adenosyl-L-methionine cycle | 10 | 3 | 1 | 2 | 1 | 0 | 2 | 0 | 3 | 0
S-adenosylmethionine biosynthesis | 8 | 2 | 1 | 1 | 1 | 0 | 1 | 0 | 2 | 0
salicylate biosynthesis | 9 | 1 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 1
salvage pathways of adenine, hypoxanthine, and their nucleosides | 10 | 3 | 0 | 3 | 0 | 0 | 2 | 1 | 2 | 1
salvage pathways of purine and pyrimidine nucleotides | 61 | 18 | 4 | 14 | 1 | 3 | 10 | 4 | 11 | 7
salvage pathways of purine nucleosides | 30 | 9 | 2 | 7 | 2 | 0 | 7 | 0 | 9 | 0
salvage pathways of purine nucleosides II (plant) | 23 | 6 | 2 | 4 | 2 | 0 | 4 | 0 | 6 | 0
salvage pathways of pyrimidine deoxyribonucleotides | 3 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1
salvage pathways of pyrimidine ribonucleotides | 36 | 8 | 2 | 6 | 0 | 2 | 4 | 2 | 4 | 4
secologanin and strictosidine biosynthesis | 20 | 2 | 0 | 2 | 0 | 0 | 2 | 0 | 2 | 0
serine biosynthesis | 7 | 2 | 2 | 0 | 2 | 0 | 0 | 0 | 2 | 0
spermidine biosynthesis | 9 | 4 | 1 | 3 | 0 | 1 | 2 | 1 | 2 | 2
spermine biosynthesis | 7 | 3 | 1 | 2 | 0 | 1 | 2 | 0 | 2 | 1
sphingolipid metabolism | 7 | 2 | 1 | 1 | 1 | 0 | 0 | 1 | 1 | 1
stachyose biosynthesis | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1
starch biosynthesis | 30 | 10 | 2 | 8 | 1 | 1 | 4 | 4 | 5 | 5
starch degradation | 54 | 18 | 5 | 13 | 2 | 3 | 7 | 6 | 9 | 9
stearoyl-ACP desaturation pathway | 8 | 2 | 2 | 0 | 2 | 0 | 0 | 0 | 2 | 0
sterol biosynthesis | 18 | 3 | 0 | 3 | 0 | 0 | 2 | 1 | 2 | 1
suberin biosynthesis | 16 | 4 | 3 | 1 | 2 | 1 | 1 | 0 | 3 | 1
sucrose biosynthesis | 25 | 6 | 0 | 6 | 0 | 0 | 5 | 1 | 5 | 1
sucrose degradation I | 12 | 5 | 1 | 4 | 0 | 1 | 1 | 3 | 1 | 4
sucrose degradation III | 47 | 10 | 2 | 8 | 0 | 2 | 5 | 3 | 5 | 5
sucrose degradation to ethanol and lactate (anaerobic) | 197 | 50 | 16 | 34 | 12 | 4 | 23 | 11 | 35 | 15
sulfate reduction I (assimilatory) | 4 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1
sulfite oxidation III | 3 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1
TCA cycle | 31 | 11 | 2 | 9 | 1 | 1 | 3 | 6 | 4 | 7
TCA cycle variation I | 39 | 13 | 3 | 10 | 1 | 2 | 3 | 7 | 4 | 9
tetrahydrofolate biosynthesis I | 11 | 1 | 0 | 1 | 0 | 0 | 1 | 0 | 1 | 0
tetrahydrofolate biosynthesis II | 14 | 3 | 0 | 3 | 0 | 0 | 3 | 0 | 3 | 0
tetrapyrrole biosynthesis I | 33 | 8 | 2 | 6 | 1 | 1 | 4 | 2 | 5 | 3
thiamine biosynthesis | 4 | 1 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 1
thiosulfate disproportionation III (rhodanese) | 2 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0
threonine biosynthesis from homoserine | 16 | 4 | 0 | 4 | 0 | 0 | 4 | 0 | 4 | 0
threonine degradation II | 12 | 4 | 2 | 2 | 1 | 1 | 1 | 1 | 2 | 2
threonine degradation III (to methylglyoxal) | 12 | 4 | 2 | 2 | 1 | 1 | 1 | 1 | 2 | 2
trans,trans-farnesyl diphosphate biosynthesis | 16 | 3 | 0 | 3 | 0 | 0 | 2 | 1 | 2 | 1
trehalose biosynthesis I | 19 | 7 | 2 | 5 | 0 | 2 | 0 | 5 | 0 | 7
trehalose biosynthesis V | 3 | 2 | 1 | 1 | 0 | 1 | 1 | 0 | 1 | 1
trehalose degradation II (high osmolarity) | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1
triacylglycerol biosynthesis | 9 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1
triacylglycerol degradation | 99 | 22 | 5 | 17 | 3 | 2 | 9 | 8 | 12 | 10
tRNA charging pathway | 72 | 8 | 1 | 7 | 1 | 0 | 7 | 0 | 8 | 0
tryptophan biosynthesis | 24 | 12 | 4 | 8 | 1 | 3 | 2 | 6 | 3 | 9
tryptophan degradation III (eukaryotic) | 2 | 1 | 0 | 1 | 0 | 0 | 1 | 0 | 1 | 0
tryptophan degradation V (side chain pathway) | 5 | 3 | 0 | 3 | 0 | 0 | 2 | 1 | 2 | 1
tyrosine degradation I | 13 | 6 | 3 | 3 | 0 | 3 | 1 | 2 | 1 | 5
UDP-D-glucuronate biosynthesis (from myo-inositol) | 1 | 1 | 0 | 1 | 0 | 0 | 1 | 0 | 1 | 0
UDP-D-xylose biosynthesis | 9 | 5 | 1 | 4 | 1 | 0 | 4 | 0 | 5 | 0
UDP-galactose biosynthesis (salvage pathway from galactose using UDP-glucose) | 47 | 17 | 2 | 15 | 1 | 1 | 6 | 9 | 7 | 10
UDP-glucose conversion | 73 | 24 | 3 | 21 | 1 | 2 | 13 | 8 | 14 | 10
UDP-N-acetylgalactosamine biosynthesis | 37 | 13 | 3 | 10 | 2 | 1 | 4 | 6 | 6 | 7
ureide biosynthesis | 9 | 5 | 2 | 3 | 2 | 0 | 1 | 2 | 3 | 2
valine biosynthesis | 24 | 7 | 3 | 4 | 2 | 1 | 1 | 3 | 3 | 4
valine degradation I | 28 | 6 | 1 | 5 | 0 | 1 | 4 | 1 | 4 | 2
valine degradation II | 66 | 13 | 5 | 8 | 3 | 2 | 5 | 3 | 8 | 5
very long chain fatty acid biosynthesis | 2 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1
vitamin E biosynthesis | 5 | 2 | 1 | 1 | 0 | 1 | 1 | 0 | 1 | 1
xylulose-monophosphate cycle | 17 | 8 | 3 | 5 | 3 | 0 | 2 | 3 | 5 | 3