Spreadsheet: 0eccff11-602d-461e-8d27-95c2dfe913c0
Sheet: Sheet1

Organism | RAYT gene | Most abundant 16-mers found flanking the respective RAYT | Occurrences within the genome | Occurrences within extragenic space |  |  | Clusters formed
 |  |  |  | 0 substitution | 1 substitution | 2 substitutions | Cluster size | 0 substitutions | Orientation of 16-mers within doublets (inverted, direct or other, other applies if center motif, which determines directionality, does not exist) | Null model (distribution of 16 bp long segments in extragenic space, repeated 10,000 times, average is shown) | Standard deviation for 10,000 simulations | Ratio between actual singlets and doublets found within extragenic space | Ratio between actual singlet frequency and singlet frequency expected under the null model | Ratio between actual doublet frequency and doublet frequency expected under the null model | 1 substitution | Orientation of 16-mers within doublets (inverted, direct or other, other applies if center motif, which determines directionality, does not exist) | Null model (distribution of 16 bp long segments in extragenic space, repeated 10,000 times, average is shown) | Standard deviation for 10,000 simulations | Ratio between actual singlets and doublets found within extragenic space | Ratio between actual singlet frequency and singlet frequency expected under the null model | Ratio between actual doublet frequency and doublet frequency expected under the null model | 2 substitutions | Orientation of 16-mers within doublets (inverted, direct or other, other applies if center motif, which determines directionality, does not exist) | Null model (distribution of 16 bp long segments in extragenic space, repeated 10,000 times, average is shown) | Standard deviation for 10,000 simulations | Ratio between actual singlets and doublets found within extragenic space | Ratio between actual singlet frequency and singlet frequency expected under the null model | Ratio between actual doublet frequency and doublet frequency expected under the null model
P. fluorescens Pf-5 | PFL_3160 | TCGCCGGCAAGCCGGC | 358 | 582 | 805 | 944 | 1 | 212 |  | 458.206 | 13.0032763086369 |  |  |  | 208 |  | 583.043 | 15.8078592340824 |  |  |  | 188 |  | 650.693 | 18.6581898049568
 |  | TCGCTGGCAAGCCAGC | 266 |  |  |  | 2 | 103 | 100 inverted, 3 direct | 48.818 | 6.00430800264199 |  |  |  | 181 | 139 inverted, 1 direct, 41 others | 81.064 | 7.31165043859017 |  |  |  | 243 | 173 inverted, 1 direct, 69 others | 101.966 | 8.68164787663343
 |  |  |  |  |  |  | 3 | 17 |  | 6.76 | 2.39097133900512 |  |  |  | 22 |  | 14.129 | 3.43170088001999 |  |  |  | 23 |  | 19.89 | 4.16263804040843
 |  |  |  |  |  |  | 4 | 10 |  | 1.116 | 0.826374490651057 |  |  |  | 17 |  | 2.977 | 1.54571573781926 |  |  |  | 22 |  | 4.763 | 2.09384709916332
 |  |  |  |  |  |  | 5 | 6 |  | 0.205 | 0.401315061739251 |  |  |  | 7 |  | 0.758 | 0.719259125551904 |  |  |  | 6 |  | 1.327 | 0.913880343525494
 |  |  |  |  |  |  | 6 | 2 |  | 0.044 | 0.210365314549631 |  |  |  | 4 |  | 0.181 | 0.361529914224091 |  |  |  | 5 |  | 0.418 | 0.542943683860346
 |  |  |  |  |  |  | 7 | 2 |  | 0.013 | 0.112591624350454 |  |  |  | 0 |  | 0.069 | 0.256628299460687 |  |  |  | 0 |  | 0.122 | 0.32448875628125
 |  |  |  |  |  |  | 8 | 1 |  | 0.003 | 0.0546352634478137 |  |  |  | 4 |  | 0.014 | 0.116723469655285 |  |  |  | 4 |  | 0.049 | 0.219907267288296
 |  |  |  |  |  |  | 9 | 1 |  | 0 | 0 |  |  |  | 0 |  | 0.007 | 0.0831219119862642 |  |  |  | 0 |  | 0.013 | 0.121155712645779
 |  |  |  |  |  |  | 10 | 0 |  | 0.001 | 0.0316069612585582 |  |  |  | 1 |  | 0 | 0 |  |  |  | 1 |  | 0.008 | 0.0887715742363082
 |  |  |  |  |  |  | 11 | 0 |  | 0 | 0 |  |  |  | 0 |  | 0 | 0 |  |  |  | 1 |  | 0.005 | 0.0703923296963531
 |  |  |  |  |  |  | 12 | 0 |  | 0 | 0 |  |  |  | 0 |  | 0 | 0 |  |  |  | 0 |  | 0.001 | 0.0316069612585582
P. syringae phaseolicola 1448A | PSPPH_4464 | GCAAGCTCGCTCCCAC | 28 | 26 | 38 | 76 | 1 | 13 |  | 25.674 | 0.796399382204662 |  |  |  | 19 |  | 37.263 | 1.17882375970985 |  |  |  | 36 |  | 73.285 | 2.22516406813748
 |  |  |  |  |  |  | 2 | 4 | 4 inverted | 0.163 | 0.368831295478738 |  |  |  | 7 | 7 inverted | 0.367 | 0.50375333688664 |  |  |  | 12 | 11 inverted, 1 others | 1.317 | 0.865356029653721
 |  |  |  |  |  |  | 3 | 0 |  |  |  |  |  |  | 0 |  | 0.001 | 0.0316069612585582 |  |  |  | 0 |  | 0.027 | 0.166097990784183
 |  |  |  |  |  |  | 4 | 0 |  |  |  |  |  |  | 0 |  |  |  |  |  |  | 0
 |  |  |  |  |  |  | 5 | 1 |  |  |  |  |  |  | 1 |  |  |  |  |  |  | 2
 |  |  |  |  |  |  | 6 | 0 |  |  |  |  |  |  | 0 |  |  |  |  |  |  | 1
 | PSPPH_5043 | GGAGCGGACTTGTCCG | 42 | 36 | 41 | 85 | 1 | 14 |  | 35.387 | 1.05923425558665 |  |  |  | 15 |  | 40.195 | 1.25455206184354 |  |  |  | 33 |  | 81.572 | 2.54976039935013
 |  |  |  |  |  |  | 2 | 6 | 5 inverted, 1 direct | 0.299 | 0.45666707218149 |  |  |  | 7 | 5 inverted, 1 direct, 1 other | 0.395 | 0.529534329960395 |  |  |  | 14 | 12 inverted, 1 direct, 1 other | 1.66 | 1.04154655163329
 |  |  |  |  |  |  | 3 | 1 |  | 0.005 | 0.0703923296963531 |  |  |  | 0 |  | 0.005 | 0.0703923296963531 |  |  |  | 0 |  | 0.036 | 0.182997661581081
 |  |  |  |  |  |  | 4 | 1 |  | 0 | 0 |  |  |  | 0 |  | 0 | 0 |  |  |  | 0
 |  |  |  |  |  |  | 5 | 0 |  | 0 | 0 |  |  |  | 1 |  | 0 | 0 |  |  |  | 1
 |  |  |  |  |  |  | 6 | 0 |  | 0 | 0 |  |  |  | 0 |  | 0 | 0 |  |  |  | 1
 |  |  |  |  |  |  | 7 | 1 |  | 0 | 0 |  |  |  | 1 |  | 0 | 0 |  |  |  | 0
 |  |  |  |  |  |  | 8 | 0 |  | 0 | 0 |  |  |  | 0 |  | 0 | 0 |  |  |  | 0
 |  |  |  |  |  |  | 9 | 0 |  | 0 | 0 |  |  |  | 0 |  | 0 | 0 |  |  |  | 0
 |  |  |  |  |  |  | 10 | 0 |  | 0 | 0 |  |  |  | 0 |  | 0 | 0 |  |  |  | 0
 |  |  |  |  |  |  | 11 | 0 |  | 0 | 0 |  |  |  | 0 |  | 0 | 0 |  |  |  | 0
 |  |  |  |  |  |  | 12 | 0 |  | 0 | 0 |  |  |  | 0 |  | 0 | 0 |  |  |  | 0
 |  |  |  |  |  |  | 13 | 0 |  | 0 | 0 |  |  |  | 0 |  | 0 | 0 |  |  |  | 1
P. syringae B728a | Psyr_4421 | TCGCGAGCAAGCTCGC | 82 | 74 | 87 | 276 | 1 | 22 |  | 73.382 | 2.22735879534555 |  |  |  | 26 |  | 83.481 | 2.60424917255486 |  |  |  | 46 |  | 242.543 | 7.28628699195478
 |  |  |  |  |  |  | 2 | 6 | 5 inverted, 1 direct | 1.273 | 0.881261942677435 |  |  |  | 5 | 4 inverted, 1 direct | 1.691 | 1.05209131073596 |  |  |  | 26 | 23 inverted, 3 direct | 14.94 | 3.47000249528978
 |  |  |  |  |  |  | 3 | 8 |  | 0.024 | 0.151276927218623 |  |  |  | 6 |  | 0.043 | 0.213122925518071 |  |  |  | 0 |  | 1.08 | 0.852205523482601
 |  |  |  |  |  |  | 4 | 1 |  |  |  |  |  |  | 2 |  | 0.002 | 0.0446542495402397 |  |  |  | 5 |  | 0.075 | 0.261206534860546
 |  |  |  |  |  |  | 5 | 1 |  |  |  |  |  |  | 1 |  |  |  |  |  |  | 5 |  | 0.005 | 0.0703923296963531
 |  |  |  |  |  |  | 6 | 0 |  |  |  |  |  |  | 2 |  |  |  |  |  |  | 3 |  | 0.002 | 0.0446542495402397
 |  |  |  |  |  |  | 7 | 1 |  |  |  |  |  |  | 0 |  |  |  |  |  |  | 4
 |  |  |  |  |  |  | 8 | 0 |  |  |  |  |  |  | 1 |  |  |  |  |  |  | 1
 |  |  |  |  |  |  | 9 |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 2
 |  |  |  |  |  |  | 10 |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 1
 |  |  |  |  |  |  | 11
 |  |  |  |  |  |  | 12
 |  |  |  |  |  |  | 13
 |  |  |  |  |  |  | 14
 |  |  |  |  |  |  | 15 |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 2
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 1
 | Psyr_4707 | TTCGCGAACAAGTTCG | 201 | 144 | 162 | 276 | 1 | 22 |  | 134.488 | 3.94450617758231 |  |  |  | 27 |  | 150.043 | 4.76783235615267 |  |  |  | 46 |  | 242.543 | 7.28628699195478
 |  |  |  |  |  |  | 2 | 15 | 12 inverted, 3 direct | 4.52 | 1.82469019131859 |  |  |  | 16 | 13 inverted, 3 direct | 5.572 | 2.23252938423024 |  |  |  | 23 | 19 inverted, 3 direct, 1 other | 14.94 | 3.47000249528978
 |  |  |  |  |  |  | 3 | 1 |  | 0.148 | 0.362386771519287 |  |  |  | 3 |  | 0.248 | 0.434622006217228 |  |  |  | 4 |  | 1.08 | 0.852205523482601
 |  |  |  |  |  |  | 4 | 2 |  | 0.007 | 0.0831219119862642 |  |  |  | 2 |  | 0.016 | 0.124529529042727 |  |  |  | 6 |  | 0.075 | 0.261206534860546
 |  |  |  |  |  |  | 5 | 2 |  |  |  |  |  |  | 2 |  | 0.001 | 0.0316069612585582 |  |  |  | 2 |  | 0.005 | 0.0703923296963531
 |  |  |  |  |  |  | 6 | 2 |  |  |  |  |  |  | 2 |  |  |  |  |  |  | 4 |  | 0.002 | 0.0446542495402397
 |  |  |  |  |  |  | 7 | 1 |  |  |  |  |  |  | 1 |  |  |  |  |  |  | 2
 |  |  |  |  |  |  | 8 | 2 |  |  |  |  |  |  | 0 |  |  |  |  |  |  | 0
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 1 |  |  |  |  |  |  | 0
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 1 |  |  |  |  |  |  | 1
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 1
 |  |  |  |  |  |  |  | 1
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 1 |  |  |  |  |  |  | 1
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 1
 |  |  |  |  |  |  |  | 1
 |  |  |  |  |  |  | 22 |  |  |  |  |  |  |  | 1 |  |  |  |  |  |  | 1
 |  |  |  |  |  |  | 23 |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 1
P. syringae tomatoe DC3000 | PSPTO_0262 | GAGCGGACTTGTCCGC | 39 | 31 | 40 | 65 | 1 | 21 |  | 30.519 | 0.950913179462189 |  |  |  | 24 |  | 39.235 | 1.21929342303295 |  |  |  | 31 |  | 63.109 | 1.93722997575894
 |  |  |  |  |  |  | 2 | 2 | 2 inverted | 0.239 | 0.420553496291783 |  |  |  | 5 | 3 inverted, 2 others | 0.378 | 0.517349973417411 |  |  |  | 14 | 12 inverted, 2 others | 0.92 | 0.752984851232869
 |  |  |  |  |  |  | 3 | 2 |  | 0.001 | 0.0316069612585582 |  |  |  | 2 |  | 0.003 | 0.0546352634478137 |  |  |  | 2 |  | 0.017 | 0.128231651148834
P. entomophila L48 | [NAME] | GTAGGAGCCAGCTTGC | 95 | 87 | 562 | 638 | 1 | 33 |  | 83.613 | 2.56005099404133 |  |  |  | 168 |  | 436.984 | 13.1543789450292 |  |  |  | 171 |  | 480.257 | 14.6046091889019
 |  |  |  |  |  |  |  | 27 | 27 inverted | 1.641 | 1.04461983640107 |  |  |  | 197 | 194 inverted, 3 direct | 49.189 | 5.88453371270961 |  |  |  | 230 | 218 inverted, 3 direct, 9 others | 60.512 | 6.72641408943149
 |  |  |  |  |  |  |  |  |  | 0.035 | 0.18608137004084 |  |  |  |  |  | 6.795 | 2.41544308881731 |  |  |  | 1 |  | 9.043 | 2.83312649854481
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 1.143 | 0.808200987277194 |  |  |  | 1 |  | 1.672 | 1.03891496490535
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 0.223 | 0.419241005891625 |  |  |  |  |  | 0.422 | 0.53352245895952
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 0.058 | 0.226977158830201 |  |  |  |  |  | 0.083 | 0.268064836852498
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 0.02 | 0.138662277592816 |  |  |  |  |  | 0.029 | 0.165438081343923
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 0.004 | 0.0630240909179659 |  |  |  |  |  | 0.009 | 0.0940615573790726
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 0.004 | 0.0630240909179659 |  |  |  |  |  | 0.001 | 0.0316069612585582
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 0.001 | 0.0316069612585582 |  |  |  |  |  | 0.001 | 0.0316069612585582
 | PSEEN4846 | CAAGGCCGCTCCCACA | 181 | 180 | 286 | 341 | 1 | 30 |  | 165.639 | 5.15222010894827 |  |  |  | 24 |  | 250.448 | 7.53817108583504 |  |  |  | 47 |  | 291.442 | 8.80676283930183
 |  |  |  |  |  |  |  | 75 | 75 inverted | 6.646 | 2.40903289547724 |  |  |  | 131 | 126 inverted, 5 others | 15.653 | 3.56307059473469 |  |  |  | 144 | 133 inverted, 11 others | 21.341 | 3.99017270267807
 |  |  |  |  |  |  |  |  |  | 0.327 | 0.504224016543102 |  |  |  |  |  | 1.219 | 0.882000287702622 |  |  |  | 2 |  | 1.92 | 1.18002460061562
 |  |  |  |  |  |  |  |  |  | 0.022 | 0.145133427271982 |  |  |  |  |  | 0.114 | 0.321737599734757 |  |  |  |  |  | 0.229 | 0.416297866814032
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 0.024 | 0.151276927218623 |  |  |  |  |  | 0.031 | 0.170695424449303
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 0.001 | 0.0316069612585582 |  |  |  |  |  | 0.005 | 0.0703923296963531
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 0.001 | 0.0316069612585582 |  |  |  |  |  | 0.001 | 0.0316069612585582
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 0.001 | 0.0316069612585582
 | PSEEN3227 | GCGGATTCATCCGCGA | 151 | 149 | 187 | 502 | 1 | 32 |  | 138.891 | 4.2427712909403 |  |  |  | 20 |  | 171.389 | 5.411297609707 |  |  |  | 123 |  | 400.044 | 11.4432863665499
 |  |  |  |  |  |  |  | 57 | 57 inverted | 4.745 | 1.96318587983888 |  |  |  | 82 | 60 inverted, 22 others | 7.158 | 2.50025785897403 |  |  |  | 188 | 165 inverte, 23 others | 41.049 | 5.40448990285948
 |  |  |  |  |  |  |  | 1 |  | 0.183 | 0.399676012433714 |  |  |  | 1 |  | 0.387 | 0.516578246817541 |  |  |  | 1 |  | 5.12 | 2.18032406146723
 |  |  |  |  |  |  |  |  |  | 0.015 | 0.120697733793733 |  |  |  |  |  | 0.031 | 0.170695424449303 |  |  |  |  |  | 0.858 | 0.762246448104317
 |  |  |  |  |  |  |  |  |  | 0.002 | 0.0446542495402397 |  |  |  |  |  | 0.002 | 0.0446542495402397 |  |  |  |  |  | 0.153 | 0.34215435347457
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 0.039 | 0.195073965079535
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 0.006 | 0.0770334352742375
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 0.002 | 0.0446542495402397
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 0.001 | 0.0316069612585582
T. sp HL-EbGR7 | Tgr7_2777 | TCGGCCTGAAGGCCGA | 50 | 125 | 144 | 148 | 1 | 20 |  | 114.171 | 4.28463088501458 |  |  |  | 12 |  | 129.701 | 4.95152756472427 |  |  |  | 12 |  | 133.139 | 4.88512744451453
 |  | TCGGGCTGAAGCCCGA | 80 |  |  |  | 2 | 46 | 45 inverted, 1 direct | 4.995 | 2.05503726320306 |  |  |  | 59 | 53 inverted, 1 direct, 5 others | 6.431 | 2.32316434428788 |  |  |  | 61 | 54 inverted, 1 direct, 6 others | 6.732 | 2.31705872025573
 |  |  |  |  |  |  | 3 | 1 |  | 0.261 | 0.456839855587988 |  |  |  | 0 |  | 0.433 | 0.55565758372432 |  |  |  |  |  | 0.42 | 0.547727309165066
 |  |  |  |  |  |  |  |  |  | 0.014 | 0.116723469655285 |  |  |  | 1 |  | 0.032 | 0.173247749719246 |  |  |  | 1 |  | 0.033 | 0.181355280424193
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 0.002 | 0.0446542495402397 |  |  |  |  |  | 0.001 | 0.0316069612585582
 |  |  |  |  |  |  | 10 | 1 |  |  |  |  |  |  | 1 |  |  |  |  |  |  | 1
P. putida W619 | PputW619_5047 | TCGCCGGCAAGCCGGC | 229 | 225 | 336 | 402 | 1 | 108 |  | 201.261 | 6.19664661799495 |  |  |  | 139 |  | 284.29 | 8.81637592122659 |  |  |  | 163 |  | 330.419 | 10.0096653710221
 |  | GATCGCCGGCAAGCCG | 20 |  |  |  |  | 55 | 55 inverted | 10.691 | 2.92103200032915 |  |  |  | 95 | 90 inverted, 5 others | 22.065 | 4.16616222471985 |  |  |  | 116 | 103 inverted, 2 direct, 11 others | 29.449 | 4.63385023139149
 |  |  |  |  |  |  |  | 1 |  | 0.704 | 0.664798150253579 |  |  |  | 1 |  | 2.101 | 1.24830659308935 |  |  |  | 1 |  | 3.397 | 1.67098428552828
 |  |  |  |  |  |  |  | 1 |  | 0.055 | 0.230572089569593 |  |  |  | 1 |  | 0.27 | 0.464349028232017 |  |  |  | 1 |  | 0.494 | 0.58408170956078
 |  |  |  |  |  |  |  |  |  | 0.005 | 0.0703923296963531 |  |  |  |  |  | 0.034 | 0.183738694639718 |  |  |  |  |  | 0.077 | 0.260115866998274
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 0.002 | 0.0446542495402397 |  |  |  |  |  | 0.017 | 0.128231651148834
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 0.001 | 0.0316069612585582 |  |  |  |  |  | 0.003 | 0.0546352634478137
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 0.001 | 0.0316069612585582 |  |  |  |  |  | 0.001 | 0.0316069612585582
 | PputW619_4597 | GATCGCCGGCAAGCCG | 148 | 129 | 431 | 566 | 1 | 63 |  | 120.951 | 3.87330622338334 |  |  |  | 164 |  | 349.175 | 10.7627031992503 |  |  |  | 197 |  | 431.984 | 13.0647807574501
 |  | CAAGGCCGCTCCTACA | 119 |  |  |  |  | 24 | 24 inverted | 3.773 | 1.79217372530166 |  |  |  | 114 | 105 inverted, 9 others | 33.355 | 4.84394082723329 |  |  |  | 164 | 149 inverted, 1 direct, 14 others | 51.562 | 6.11874424920564
 |  |  |  |  |  |  |  |  |  | 0.161 | 0.377368351710729 |  |  |  | 2 |  | 3.982 | 1.8328682161841 |  |  |  | 2 |  | 7.6 | 2.6017319248933
 |  |  |  |  |  |  |  | 2 |  | 0.005 | 0.0703923296963531 |  |  |  | 2 |  | 0.588 | 0.626846884826762 |  |  |  | 2 |  | 1.472 | 0.923092057677322
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 1 |  | 0.134 | 0.326415046808174 |  |  |  |  |  | 0.322 | 0.495473791716855
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 0.014 | 0.125004696608464 |  |  |  |  |  | 0.072 | 0.260878810472897
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 0.009 | 0.0940615573790726 |  |  |  | 1 |  | 0.016 | 0.124529529042727
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 0.005 | 0.0703923296963531
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 0 | 0
 |  |  |  |  |  |  |  | 1 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 0.001 | 0.0316069612585582
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 1 |  |  |  |  |  |  | 1
P. putida KT2440 | PP_0568 | TGTGGGAGCGGCCTTG | 54 | 52 | 105 | 276 | 1 | 22 |  | 50.715 | 1.57308562175534 |  |  |  | 47 |  | 99.503 | 3.17959869147647 |  |  |  | 124 |  | 241.06 | 7.47736232553614
 |  |  |  |  |  |  |  | 15 | 15 inverted | 0.629 | 0.628690261133769 |  |  |  | 29 | 29 inverted | 2.624 | 1.38722712166648 |  |  |  | 76 | 42 inverted, 34 others (contains gcgggcacgcccgc palindrome, which is associated with PP_5176) | 15.397 | 3.55410453561091
 |  |  |  |  |  |  |  |  |  | 0.009 | 0.0940615573790726 |  |  |  |  |  | 0.076 | 0.262572596377398 |  |  |  |  |  | 1.199 | 0.898350109879174
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 0.004 | 0.0630240909179659 |  |  |  |  |  | 0.108 | 0.309789220860509
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 0.001 | 0.0316069612585582 |  |  |  |  |  | 0.021 | 0.141941566880207
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 0.002 | 0.0446542495402397
 | PP_5176 | CCTGTGGGAGCGGGCG | 86 | 80 | 194 | 297 | 1 | 62 |  | 76.799 | 2.53388776116587 |  |  |  | 94 |  | 176.17 | 5.54477372086684 |  |  |  | 103 |  | 256.517 | 8.0738385282082
 |  |  |  |  |  |  |  | 9 | 9 inverted | 1.535 | 1.00197879793511 |  |  |  | 50 | 47 inverted, 3 others | 8.141 | 2.6279572443779 |  |  |  | 97 | 81 inverted, 16 others | 17.585 | 3.76272253240334
 |  |  |  |  |  |  |  |  |  | 0.041 | 0.197039040251883 |  |  |  |  |  | 0.466 | 0.585854218355696 |  |  |  |  |  | 1.544 | 0.958200214804636
 |  |  |  |  |  |  |  |  |  | 0.002 | 0.0446542495402397 |  |  |  |  |  | 0.026 | 0.157131366271239 |  |  |  |  |  | 0.15 | 0.377126934499148
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 0.008 | 0.0887715742363082 |  |  |  |  |  | 0.015 | 0.120697733793733
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 0.001 | 0.0316069612585582 |  |  |  |  |  | 0.001 | 0.0316069612585582
P. putida F1 | Pput_0607 | CAAGGCCGCTCCCACA | 140 | 140 | 208 | 407 | 1 | 41 |  | 130.977 | 4.11490570000332 |  |  |  | 64 |  | 188.746 | 5.81293055572193 |  |  |  | 150 |  | 337.053 | 10.4696182880799
 |  |  |  |  |  |  |  | 48 | 48 inverted | 4.203 | 1.88548982810618 |  |  |  | 69 | 68 inverted, 1 direct | 8.778 | 2.70883378901262 |  |  |  | 118 | 81 inverted, 3 direct, 34 others | 29.273 | 4.71601752459553
 |  |  |  |  |  |  |  | 1 |  | 0.192 | 0.415585841423395 |  |  |  | 2 |  | 0.505 | 0.593765511361583 |  |  |  | 7 |  | 3.088 | 1.5538853805142
 |  |  |  |  |  |  |  |  |  | 0.009 | 0.0940615573790726 |  |  |  |  |  | 0.043 | 0.198547042103195 |  |  |  |  |  | 0.44 | 0.556804841602181
 |  |  |  |  |  |  |  |  |  | 0.001 | 0.0316069612585582 |  |  |  |  |  | 0.001 | 0.0316069612585582 |  |  |  |  |  | 0.062 | 0.242076932484781
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 0.001 | 0.0316069612585582 |  |  |  |  |  | 0.01 | 0.0990495371559646
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 0.001 | 0.0316069612585582
 | Pput_5083 | GCCCGCTCCCACAGGG | 70 | 69 | 272 | 508 | 1 | 53 |  | 66.761 | 2.01219154003631 |  |  |  | 150 |  | 239.608 | 7.50584145795738 |  |  |  | 199 |  | 403.874 | 11.7458745818987
 |  |  |  |  |  |  |  | 8 | 7 inverted, 1 direct | 1.091 | 0.768108008624384 |  |  |  | 61 | 53 inverted, 2 direct, 6 others | 14.388 | 3.58855614296212 |  |  |  | 148 | 109 inverted, 3 direct, 36 others | 41.869 | 5.49465878049893
 |  |  |  |  |  |  |  |  |  | 0.019 | 0.135289179767497 |  |  |  |  |  | 1.064 | 0.758736170599883 |  |  |  | 3 |  | 5.346 | 2.18227771835759
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 0.091 | 0.287079397694402 |  |  |  | 1 |  | 0.826 | 0.707628913116668
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 0.012 | 0.108284132971795 |  |  |  |  |  | 0.159 | 0.379766621343539
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 0.03 | 0.173943543589166
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 0.009 | 0.0940615573790726
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 0.001 | 0.0316069612585582
 | Pput_3919 | CGGGTTTACCCGCGAA | 404 | 387 | 583 | 798 | 1 | 112 |  | 323.549 | 9.70289997201182 |  |  |  | 133 |  | 447.653 | 12.9002359931777 |  |  |  | 174 |  | 560.337 | 16.5370338004709
 |  |  |  |  |  |  |  | 88 | 78 inverted, 10 direct | 26.835 | 4.41791191862409 |  |  |  | 137 | 81 inverted, 4 direct, 52 others | 52.93 | 5.97764563581243 |  |  |  | 205 | 86 inverted, 3 direct, 116 others | 85.622 | 7.86970580043406
 |  |  |  |  |  |  |  | 17 |  | 2.662 | 1.48576181272913 |  |  |  | 24 |  | 7.459 | 2.63688138953242 |  |  |  | 28 |  | 15.175 | 3.61378663299715
 |  |  |  |  |  |  |  | 5 |  | 0.355 | 0.521604732049561 |  |  |  | 13 |  | 1.274 | 0.860847032644952 |  |  |  | 14 |  | 3.462 | 1.73940596213222
 |  |  |  |  |  |  |  | 4 |  | 0.059 | 0.233011141776937 |  |  |  | 5 |  | 0.286 | 0.484356092998554 |  |  |  | 7 |  | 0.916 | 0.698887249409652
 |  |  |  |  |  |  |  |  |  | 0.011 | 0.103779097611711 |  |  |  | 2 |  | 0.065 | 0.254700996459765 |  |  |  | 4 |  | 0.262 | 0.465307101491799
 |  |  |  |  |  |  |  |  |  | 0.002 | 0.0446542495402397 |  |  |  | 1 |  | 0.022 | 0.151872411020663 |  |  |  | 1 |  | 0.077 | 0.258471434558023
 |  |  |  |  |  |  |  | 1 |  |  |  |  |  |  | 1 |  | 0.005 | 0.0703923296963531 |  |  |  | 1 |  | 0.028 | 0.16272809355619
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 0.009 | 0.0940615573790726
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 0.005 | 0.0703923296963531
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 1 |  |  |  |  |  |  | 1
P. putida GB1 | PputGB1_0613 | TCGCGACACAAGGCCG | 235 | 234 | 313 | 338 | 1 | 73 |  | 209.196 | 6.36423137739546 |  |  |  | 60 |  | 269.492 | 8.23805070483394 |  |  |  | 65 |  | 287.327 | 8.8498356856307
 |  |  |  |  |  |  |  | 79 | 79 inverted | 11.059 | 3.04202028369409 |  |  |  | 125 | 120 inverted, 5 others | 18.635 | 3.90586963333296 |  |  |  | 135 | 127 inverted, 8 others | 21.444 | 4.09337985320475
 |  |  |  |  |  |  |  | 1 |  | 0.78 | 0.70758057510807 |  |  |  | 1 |  | 1.752 | 1.03463583124851 |  |  |  | 1 |  | 2.131 | 1.14787925749609
 |  |  |  |  |  |  |  |  |  | 0.079 | 0.270306088317265 |  |  |  |  |  | 0.188 | 0.394394110902678 |  |  |  |  |  | 0.292 | 0.459543281996406
 |  |  |  |  |  |  |  |  |  | 0.006 | 0.0770334352742375 |  |  |  |  |  | 0.034 | 0.178210726565667 |  |  |  |  |  | 0.035 | 0.201565382949562
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 0.01 | 0.0990495371559646 |  |  |  |  |  | 0.007 | 0.0831219119862642
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 0.001 | 0.0316069612585582
 | PputGB1_5236 | TCGCGGGTAAACCCGC | 90 | 87 | 135 | 217 | 1 | 37 |  | 83.297 | 2.53422830544212 |  |  |  | 47 |  | 126.198 | 4.10575181836335 |  |  |  | 95 |  | 195.888 | 5.97399062771445
 |  |  |  |  |  |  |  | 25 | 25 inverted | 1.771 | 1.03933436242477 |  |  |  | 44 | 29 inverted, 15 others | 4.112 | 1.87811202455465 |  |  |  | 61 | 36 inverted, 25 others | 9.471 | 2.8058734976982
 |  |  |  |  |  |  |  |  |  | 0.051 | 0.21442161184831 |  |  |  |  |  | 0.176 | 0.387951887051302 |  |  |  |  |  | 0.652 | 0.634661594347208
 |  |  |  |  |  |  |  |  |  | 0.002 | 0.0446542495402397 |  |  |  |  |  | 0.01 | 0.108686304163462 |  |  |  |  |  | 0.048 | 0.208677114552933
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 0.002 | 0.0446542495402397 |  |  |  |  |  | 0.003 | 0.0546352634478137
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 0 | 0
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | 0.001 | 0.0316069612585582
 | PputGB1_1364 | GCCGCCCGCGCGGCGC | 35 | 35 | 44 | 51 | 1 | 17 |  | 34.412 | 1.12657864147844 |  |  |  | 22 |  | 43.11 | 1.30415056979963 |  |  |  | 29 |  | 49.74 | 1.56150270274845
 |  |  |  |  |  |  |  | 9 | 9 inverted | 0.285 | 0.494584182433601 |  |  |  | 11 | 10 inverted, 1 other | 0.433 | 0.539846734264916 |  |  |  | 11 | 10 inverted, 1 other | 0.624 | 0.627435372884844
 |  |  |  |  |  |  |  |  |  | 0.006 | 0.0770334352742375 |  |  |  |  |  | 0.008 | 0.0887715742363082 |  |  |  |  |  | 0.004 | 0.0630240909179659