Spreadsheet: c0e0f3bd-2da4-4ce2-ab78-e8c045d7d307
Sheet: Sheet1

Unnamed: 0 | Supplementary table 1 | Unnamed: 2 | Unnamed: 3 | Unnamed: 4
 | Comparison to previous works
Transcription factors with previously known motif:
TF | [NAME] | MacIsaac | BLiC
ABF1 | 1.913 | 2.614 | 2.561
ACE2 | 2.1 | 0.899 | 1.366
AFT2 | 1.249 | 1.534 | 2.111
BAS1 | 2.128 | 1.774 | 2.002
CAD1 | 1.98 | 1.919 | 1.728
CBF1 | 1.979 | 2.322 | 2.413
CIN5 | 0.358 | 0.331 | 1.728
FKH1 | 2.052 | 2.064 | 2.286
[NAME] | 1.857 | 1.776 | 2.286
GAL4 | 1.452 | 1.373 | 1.955
GCN4 | 1.74 | 2.151 | 1.832
GLN3 | 2.088 | 1.702 | 3.234
HAP1 | 1.784 | 1.295 | 2.143
[NAME] | 1.378 | 1.501 | 1.398
HSF1 | 1.673 | 3.092 | 3.548
INO2 | 0.826 | 1.479 | 1.626
INO4 | 2.218 | 2.388 | 2.412
LEU3 | 2.39 | 2.683 | 2.111
MBP1 | 1.851 | 1.794 | 2.175
[NAME] | 1.766 | 2.656 | 3.091
MSN2 | 1.658 | 1.782 | 1.662
NRG1 | 1.278 | 1.178 | 1.302
[NAME] | 1.637 | 1.747 | 1.769
RAP1 | 1.95 | 2.308 | 3.063
RCS1 | 1.578 | 1.526 | 2.113
[NAME] | 2.187 | 2.414 | 2.344
RPN4 | 2.941 | 2.801 | 2.933
SIP4 | 1.875 | 1.273 | 1.888
SKN7 | 0.986 | 0.973 | 2.076
STB5 | 0.711 | 0.719 | 1.013
STE12 | 1.651 | 1.768 | 1.755
SUM1 | 1.562 | 1.721 | 2.254
SUT1 | 0.177 | 0.618 | 1.407
SWI4 | 1.649 | 1.725 | 1.795
[NAME] | 1.138 | 0.641 | 1.795
TEC1 | 1.75 | 1.849 | 1.625
TYE7 | 0.907 | 0.711 | 1.044
UME6 | 1.951 | 2.114 | 2.763
YAP1 | 1.736 | 1.483 | 1.706
[NAME] | 1.665 | 1.97 | 1.728
legend
TF | Name of the transcription factor
Harbison,MacIsaac.BLiC | Similarity of the discovered motif to the motif from the literature
Transcription factors without a previously known motif
TF | condition | [NAME] | macIsaac | BLiC
FHL1 | RAPA | 89.18533962108363 | 0.03025290132106294 | 102.6709053172131
FHL1 | SM | 84.47745144401374 | 0.05567429444578298 | 98.28866527044174
FHL1 | YPD | 92.16604627078415 | 0.0355956290979609 | 102.6536528944334
MET4 | SM | 4.38586346510049 | 3.319654513340242 | 7.617557881296798
MET4 | YPD | 2.812953313573238 | 6.333538181845599 | 9.825088728212867
NDD1 | YPD | 17.50126638755331 | 13.91965134840134 | 19.80334030614296
PHD1 | [NAME] | 15.02791616905697 | 6.068971041564527 | 20.40006018964014
PHD1 | YPD | 7.521928680306813 | 7.859727708970814 | 20.63884467695105
[NAME] | YPD | 7.398396257450584 | 7.412511289018409 | 7.451592153920774
RLR1 | YPD | 7.42384991971613 | 3.212618881804689 | 4.320596635359003
SFP1 | H2O2Hi | 0 | 0 | 4.207088169201533
SFP1 | H2O2Lo | 0.5144006472924784 | 0.4214077742982941 | 3.275218840128431
SFP1 | SM | 19.17938152899237 | 23.45506051904044 | 28.34197524064133
SFP1 | YPD | 0 | 0 | 2.929315793021363
SNT2 | YPD | 13.61553009656992 | 13.64416550411506 | 13.51633141413519
SOK2 | BUT14 | 13.11730701350269 | 0 | 20.69545346563693
SPT2 | YPD | 12.68616440416684 | 4.265038639708106 | 4.444412260234314
STB1 | YPD | 10.70787246337639 | 9.928839962957792 | 11.41255957134583
THI2 | Thi- | 6.793678846134481 | 8.32349111909991 | 2.592111344544503
THI2 | YPD | 0 | 0 | 1.981944766325283
legend
TF | Name of the transcription factor
condition | Environmental condition of the ChIP-chip assay
Harbison,MacIsaac.BLiC | Enrichment (-log10 hypergeometric p-value)
 | of sequences with the motif among the sequences bound by the TF