Spreadsheet: 2347798c-8a90-4940-96f6-af13b79ac094
Sheet: Sheet1

Table S3. [NAME] and their abbreviations used in iSO783 | Unnamed: 1 | Unnamed: 2 | Unnamed: 3 | Unnamed: 4 | Unnamed: 5 | Unnamed: 6 | Unnamed: 7
abbreviation | officialName | formula | charge | casNumber | formulaNeutral | CompoundNames | KeggID
10fthf | 10-Formyltetrahydrofolate | C20H21N7O7 | -2 | 692-29-5 | C20H23N7O7 | 10-Formyl-THF | C00234
12dag3p | 1,2-Diacyl-sn-glycerol 3-phosphate | C5H5O8PR2 | -2 |  | [NAME] | Phosphatidate/ Phosphatidic acid | C00416
12dgr | 1,2-Diacylglycerol | C5H6O5R2 | 0 |  | C5H6O5R2 | D-1,2-Diacylglycerol/ 1,2-Diacyl-sn-glycerol | C00641
13dpg | 3-Phospho-D-glyceroyl phosphate | C3H4O10P2 | -4 |  | C3H8O10P2 | 1,3-bis-phosphoglycerate/ 3-Phospho-D-glyceroyl phosphate/ (R)-2-Hydroxy-3-(phosphonooxy)-1-monoanhydride with phosphoric propanoic acid | C00236
1ap2ol | 1-Aminopropan-2-ol | C3H10NO | 1 | 1867-62-5 | C3H9NO |  | C05771
1pyr5c | 1-Pyrroline-5-carboxylate | C5H6NO2 | -1 |  | C5H7NO2 | (S)-1-Pyrroline-5-carboxylate/ L-1-Pyrroline-5-carboxylate/ 1-Pyrroline-5-carboxylic acid | C03912
23dhdp | 2,3-Dihydrodipicolinate | C7H5NO4 | -2 |  | C7H7NO4 | Dihydrodipicolinic acid | C03340
23dhmb | (R)-2,3-Dihydroxy-3-methylbutanoate | C5H9O4 | -1 |  | C5H10O4 | (R)-2,3-Dihydroxy-isovalerate/ (R)-2,3-Dihydroxy-isovaleric acid | C04272
23dhmp | (R)-2,3-Dihydroxy-3-methylpentanoate | C6H11O4 | -1 |  | C6H12O4 | 2,3-Dihydroxy-3-methylvalerate | C06007
25aics | (S)-2-[5-Amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido]succinate | C13H15N4O12P | -4 |  | C13H19N4O12P | 1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole/ 1-(5'-Phosphoribosyl)-4-(N-succinocarboxamide)-5-aminoimidazole/ 5'-Phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole | C04823
25dhpp | 2,5-Diamino-6-hydroxy-4-(5'-phosphoribosylamino)-pyrimidine | C9H14N5O8P | -2 |  | C9H16N5O8P | DIAMINO-OH-PHOSPHORIBOSYLAMINO-PYR/ 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine/ 2,5-Diamino-6-(ribosylamino)-4-(3H)-pyrimidinone 5'-phosphate | C01304
26dap-LL | LL-2,6-Diaminoheptanedioate | C7H14N2O4 | 0 | 583-93-7 | C7H14N2O4 | LL-2,6-Diaminopimelic acid/ LL-2,6-Diaminopimelate | C00666
26dap-M | [NAME] | C7H14N2O4 | 0 |  | C7H14N2O4 | [NAME] acid/ meso-2,6-Diaminopimelate | C00680
2ahbut | (S)-2-Aceto-2-hydroxybutanoate | C6H9O4 | -1 |  | C6H10O4 |  | C06006
2ahhmd | 2-Amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate | C7H8N5O8P2 | -3 | 70608-72-9 | C7H11N5O8P2 | 2-Amino-7,8-dihydro-4-hydroxy-6-(diphosphooxymethyl)pteridine/ 2-Amino-4-hydroxy-6-hydroxymethyl-7,8-dihydro pteridine diphosphate/ dihydropterin-CH2OH-diphosphate/ dihydropterin-CH2OH-pp/ 7,8-Dihydropterin pyrophosphate/ 2-Amino-4-hydroxy-6-pyrophosphoryl-methylpteridine/ 6-hydroxymethyl-dihydropterin pyrophosphate | C04807
2ahhmp | 2-Amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine | C7H9N5O2 | 0 |  | C7H9N5O2 | 6-hydroxymethyl dihydropterin | C01300
2aobut | L-2-Amino-3-oxobutanoate | C4H7NO3 | 0 |  | C4H7NO3 | L-2-Amino-acetoacetate | C03508
2c25dho | 2-Carboxy-2,5-dihydro-5-oxofuran-2-acetate | C7H4O6 | -2 |  | C7H6O6 | 4-Carboxymuconolactone/ gamma-Carboxymuconolactone/ 5-Carboxy-2,5-dihydro-2-oxofuran-5-acetate | C01278
2cpr5p | 1-(2-Carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate | C12H13NO9P | -3 |  | C12H16NO9P |  | C01302
2dda7p | 2-Dehydro-3-deoxy-D-arabino-heptonate 7-phosphate | C7H10O10P | -3 |  | C7H13O10P |  | C04691
2ddg6p | 2-Dehydro-3-deoxy-D-gluconate 6-phosphate | C6H8O9P | -3 |  | C6H11O9P | 2-Dehydro-3-deoxy-6-phospho-D-gluconate/ 6-Phospho-2-dehydro-3-deoxy-D-gluconate/ 2-Keto-3-deoxy-6-phosphogluconate | C04442
2dhp | 2-Dehydropantoate | C6H9O4 | -1 |  | C6H10O4 |  | C00966
2dmmq7 | 2-Demethylmenaquinone 7 | C45H62O2 | 0 |  | C45H65O2 |  | C05818
2dr1p | 2-Deoxy-D-ribose 1-phosphate | C5H9O7P | -2 |  | C5H11O7P | Deoxy-ribose 1-phosphate | C00672
2dr5p | 2-Deoxy-D-ribose 5-phosphate | C5H9O7P | -2 | 102916-66-5 | C5H11O7P |  | C00673
2h3opp | 2-Hydroxy-3-oxopropanoate | C3H3O4 | -1 |  | C3H4O4 | Tartronate semialdehyde | C01146
2ippm | 2-Isopropylmaleate | C7H8O4 | -2 |  | C7H10O4 | beta-isopropylmaleate | C02631
2kmb | 2-keto-4-methylthiobutyrate | C5H7O3S | -1 | 583-92-6 | [NAME] | 4-Methylthio-2-oxobutanoate/ 4-Methylthio-2-oxobutanoic acid/ 2-keto-4-methylthiobutyric acid | C01180
2mahmp | 2-Methyl-4-amino-5-hydroxymethylpyrimidine diphosphate | C6H8N3O7P2 | -3 | 745-65-3 | C6H11N3O7P2 |  | C04752
2mbcoa | 2-Methylbutanoyl-CoA | C26H40N7O17P3S | -4 |  | C26H44N7O17P3S | 2-Methylbutyryl-CoA | C01033
2mcacn | cis-2-Methylaconitate | C7H5O6 | -3 |  | C7H8O6 | (Z)-But-2-ene-1,2,3-tricarboxylate | C04225
2mcit | 2-Hydroxybutane-1,2,3-tricarboxylate | C7H7O7 | -3 |  | C7H10O7 | Homocitrate/ (2R, 3S)-2-Hydroxybutane-1,2,3-tricarboxylate/ 2-Methylcitrate | C02225
2me4p | 2-C-methyl-D-erythritol 4-phosphate | C5H11O7P | -2 |  | C5H13O7P |  | C11434
2mecdp | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate | C5H10O9P2 | -2 |  | C5H12O9P2 |  | C11453
2obut | 2-Oxobutanoate | C4H5O3 | -1 | 600-18-0 | C4H6O3 | [NAME] acid/ 2-Oxobutyric acid/ 2-Oxobutyrate/ 2-Oxobutanoic acid/ alpha-Ketobutyrate | C00109
2ohph | 2-Octaprenyl-6-hydroxyphenol | C46H70O2 | 0 |  | C46H70O2 |  | C05811
2ombzl | 2-Octaprenyl-6-methoxy-1,4-benzoquinol | C47H72O3 | 0 |  | C47H72O3
2omhmbl | 2-Octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol | C48H74O4 | 0 |  | C48H74O4
2ommbl | 2-Octaprenyl-3-methyl-6-methoxy- 1,4-benzoquinol | C48H74O3 | 0 |  | C48H74O3
2omph | 2-Octaprenyl-6-methoxyphenol | C47H72O2 | 0 |  | C47H72O2 |  | C05812
2oph | 2-Octaprenylphenol | C46H70O | 0 |  | C46H70O |  | C05810
2p4c2me | 2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol | [NAME] | -4 |  | C14H26N3O17P3 |  | C11436
2pg | D-Glycerate 2-phosphate | [NAME] | -3 |  | C3H7O7P | 2-Phospho-D-glycerate/ 2-phosphoglyceric acid | C00631
2pglyc | 2-Phosphoglycolate | C2H2O6P | -3 |  | C2H5O6P | 2-phosphoglycolic acid/ Phosphoglycolic acid | C00988
2shchc | 2-Succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate | C11H10O6 | -2 |  | C11H12O6 |  | C05817
34hpp | 3-(4-Hydroxyphenyl)pyruvate | [NAME] | -1 |  | C9H8O4 | 4-Hydroxyphenylpyruvate/ p-Hydroxyphenylpyruvic acid | C01179
3c2hmp | 3-Carboxy-2-hydroxy-4-methylpentanoate | C7H10O5 | -2 |  | C7H12O5 | 3-Isopropylmalate/ 2-D-threo-hydroxy-3-carboxy-isocaproate | C04411
3c3hmp | 3-Carboxy-3-hydroxy-4-methylpentanoate | C7H10O5 | -2 |  | C7H12O5 | 2-Isopropylmalate/ 2-Isopropylmalic acid/ 3-Carboxy-3-hydroxy-isocaproate/ 3-Carboxy-3-hydroxyisocaproate | C02504
3c4mop | 3-Carboxy-4-methyl-2-oxopentanoate | C7H8O5 | -2 |  | C7H10O5 | 2-Oxo-4-methyl-3-carboxypentanoate | C04236
3dhq | 3-Dehydroquinate | C7H9O6 | -1 |  | C7H10O6 | 5-Dehydroquinate/ 3-Dehydroquinic acid/ 5-Dehydroquinic acid | C00944
3dhsk | 3-Dehydroshikimate | C7H7O5 | -1 | 10457-99-5 | C7H8O5 |  | C02637
3hmp | 3-Hydroxy-2-methylpropanoate | C4H7O3 | -1 |  | C4H8O3 | (S)-3-hydroxyisobutyrate | C01188
3htdACP | (3R)-3-Hydroxytetradecanoyl-[acyl-carrier protein] | C14H27O2X | 0 | 35687-86-6 | C14H27O2X | ([NAME] protein]/ beta-hydroxymyristyl-[acyl-carrier protein]/ HMA/ R-3-hydroxy-myristoyl-ACP | C04688
3ig3p | C'-(3-Indolyl)-glycerol 3-phosphate | C11H12NO6P | -2 |  | C11H14NO6P | [NAME] phosphate/ 1-(Indol-3-yl)glycerol 3-phosphate/ (3-Indolyl)-glycerol phosphate | C03506
3mb2coa | 3-Methylbut-2-enoyl-CoA | C26H38N7O17P3S | -4 |  | C26H42N7O17P3S | 3-Methylcrotonoyl-CoA | C03069
3mgcoa | 3-Methylglutaconyl-CoA | C27H37N7O19P3S | -5 |  | C27H42N7O19P3S | trans-3-Methylglutaconyl-CoA | C03231
3mob | 3-Methyl-2-oxobutanoate | C5H7O3 | -1 |  | C5H8O3 | 2-Oxoisovalerate/ 2-Oxo-3-methylbutanoate/ 2-Oxoisopentanoate/ 3-Methyl-2-oxobutyric acid/ 2-Ketovaline/ 2-Keto-3-methylbutyric acid/ alpha-Ketovaline | C00141
3mop | (S)-3-Methyl-2-oxopentanoate | C6H9O3 | -1 |  | C6H10O3 | (R)-2-oxo-3-methylpentanoate/ 2-oxo-3-methylpentanoate/ alpha-keto-beta-methylvalerate/ (S)-2-oxo-3-methylpentanoate/ ketoisoleucine/ alpha-oxo-beta-methylvalerate | C00671
3ophb | 3-Octaprenyl-4-hydroxybenzoate | C47H69O3 | -1 |  | C47H70O3 |  | C05809
3pg | 3-Phospho-D-glycerate | [NAME] | -3 |  | C3H7O7P | D-Glycerate 3-phosphate/ 3-Phosphoglycerate/ 3-phosphoglyceric acid | C00197
3php | 3-Phosphohydroxypyruvate | C3H2O7P | -3 |  | [NAME] | 3-Phosphonooxypyruvate/ 3-Phosphonooxypyruvic acid/ 3-Phosphohydroxypyruvic acid | [NAME]
3psme | 5-O-(1-Carboxyvinyl)-3-phosphoshikimate | C10H9O10P | -4 |  | C10H13O10P | 3-Phosphate-shikimate/ O5-(1-Carboxyvinyl)-3-phosphoshikimate | C01269
4abut | 4-Aminobutanoate | C4H9NO2 | 0 | 56-12-2 | C4H9NO2 | GABA/ 4-Aminobutanoic acid/ 4-Aminobutylate/ 4-Aminobutyric acid/ gamma-Aminobutyric acid/ (4-Aminobutyl)guanidine | C00334
4abz | 4-Aminobenzoate | C7H6NO2 | -1 | 150-13-0 | C7H7NO2 | p-Aminobenzoate | C00568
4adcho | 4-amino-4-deoxychorismate | C10H10NO5 | -1 |  | C10H11NO5 |  | C11355
4ampm | 4-Amino-2-methyl-5-phosphomethylpyrimidine | C6H8N3O4P | -2 |  | C6H10N3O4P | 4-Amino-5-phosphomethyl-2-methylpyrimidine | C04556
4c2me | 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol | C14H23N3O14P2 | -2 |  | C14H25N3O14P2 |  | C11435
4fumacac | 4-Fumarylacetoacetate | C8H6O6 | -2 | 28613-33-4 | C8H8O6 | 4-Fumarylacetoacetic acid | C01061
4hba | 4-Hydroxy-benzyl alcohol | C7H8O2 | 0 |  | C7H8O2
4hbcoa | 4-Hydroxybenzoyl-CoA | C28H36N7O18P3S | -4 | 27718-41-8 | C28H40N7O18P3S |  | C02949
4hbutcoa | 4-Hydroxybutyryl-CoA | C25H38N7O18P3S | -4 |  | C25H42N7O18P3S |  | C11062
4hbz | 4-Hydroxybenzoate | C7H5O3 | -1 | 99-96-7 | C7H6O3 | Hydroxybenzenecarboxylic acid/ Hydroxybenzoic acid/ 4-Hydroxybenzoic acid | C00156
4hdxbutn | 4-Hydroxybutanoate | C4H7O3 | -1 | 591-81-1 | C4H8O3 |  | C00989
4izp | 4-Imidazolone-5-propanoate | C6H7N2O3 | -1 |  | C6H8N2O3 | 4-Imidazolone-5-propionic acid/ 4,5-Dihydro-4-oxo-5-imidazolepropanoate | C03680
4mlacac | 4-Maleylacetoacetate | C8H6O6 | -2 | 5698-52-2 | C8H8O6 | 4-Maleylacetoacetic acid | C01036
4mop | 4-Methyl-2-oxopentanoate | C6H9O3 | -1 |  | C6H10O3 | [NAME] 2-Oxoisocaproate | C00233
4mpetz | 4-Methyl-5-(2-phosphoethyl)-thiazole | C6H8NO4PS | -2 |  | C6H10NO4PS | 4-Methyl-5-(2-phosphono-oxyethyl)-thiazole | [NAME]
4pasp | 4-Phospho-L-aspartate | C4H6NO7P | -2 |  | [NAME] | L-4-Aspartyl phosphate | C03082
4per | 4-Phospho-D-erythronate | C4H6O8P | -3 |  | C4H9O8P |  | C03393
4ppan | D-4'-Phosphopantothenate | C9H15NO8P | -3 |  | C9H18NO8P | (R)-4'-Phosphopantothenate | C03492
4ppcys | N-((R)-4-Phosphopantothenoyl)-L-cysteine | C12H20N2O9PS | -3 |  | C12H23N2O9PS | (R)-4'-Phosphopantothenoyl-L-cysteine | C04352
4r5au | 4-(1-D-Ribitylamino)-5-aminouracil | C9H16N4O6 | 0 |  | C9H16N4O6 | 4-(1-D-Ribitylamino)-5-amino-2,6-dihydroxypyrimidine | C04732
5678thh | (6R)-6-(L-erythro-1,2-Dihydroxypropyl)-5,6,7,8-tetrahydro-4a-hydroypterin | [NAME] | 0 |  | [NAME] |  | C06486
5aizc | 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate | C9H11N3O9P | -3 |  | C9H14N3O9P | 1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate/ 1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxylate/ 1-(5'-Phosphoribosyl)-5-amino-4-carboxyimidazole/ 5'-Phosphoribosyl-5-amino-4-imidazolecarboxylate/ 1-(5'-Phosphoribosyl)-4-carboxy-5-aminoimidazole/ 5'-Phosphoribosyl-4-carboxy-5-aminoimidazole | C04751
5aop | 5-Amino-4-oxopentanoate | C5H9NO3 | 0 | 106-60-5 | C5H9NO3 | 5-Aminolevulinate/ 5-Amino-4-oxovaleric acid | C00430
5aprbu | 5-Amino-6-(5'-phosphoribitylamino)uracil | C9H15N4O9P | -2 |  | C9H17N4O9P |  | C04454
5apru | 5-Amino-6-(5'-phosphoribosylamino)uracil | C9H13N4O9P | -2 |  | C9H15N4O9P |  | C01268
5caiz | 5-phosphoribosyl-5-carboxyaminoimidazole | C9H11N3O9P | -3 |  | C9H14N3O9P | 1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate/ 5'Phosphoribosyl-4-carboxy-5-aminoimidazole/ 1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxylate/ 4-Carboxy-5-aminoimidazole ribonucleotide/ 5'-Phosphoribosyl-5-amino-4-imidazolecarboxylate/ 5'-Phosphoribosyl-4-carboxy-5-aminoimidazole/ 5-amino-1-(5-O-phosphono-β-D-ribofuranosyl)-1H-imidazole-4-carboxylic acid/ 5'-phosphoribosyl-4-carboxy-5-aminoimidazole/ 1-(5'-Phosphoribosyl)-5-amino-4-carboxyimidazole/ 1-(5'-Phosphoribosyl)-4-carboxy-5-aminoimidazole/ AICOR/ Carboxy-air/ 5-Aminoimidazole carboxilic acid ribonucleotice/ 5-Amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate/ Carboxyaminoimidazole ribotide/ 5-amino-4-carboxyimidazole ribonucleotide | C04751
5drib | 5-Deoxy-D-ribose | C5H10O4 | 0 |  | C5H10O4
5mdr1p | 5-Methylthio-5-deoxy-D-ribose 1-phosphate | C6H11O7PS | -2 |  | C6H13O7PS | S5-Methyl-5-thio-D-ribose 1-phosphate/ 5-Methylthio-D-ribose 1-phosphate | C04188
5mdru1p | 5-Methylthio-5-deoxy-D-ribulose 1-phosphate | C6H11O7PS | -2 |  | C6H13O7PS |  | C04582
5mta | 5-Methylthioadenosine | C11H15N5O3S | 0 | 2457-80-9 | C11H15N5O3S | 5'-Methylthioadenosine/ Methylthioadenosine/ 5'-Deoxy-5'-(methylthio)adenosine/ 5'-S-Methylthioadenosine | [NAME]
5mthf | 5-Methyltetrahydrofolate | C20H24N7O6 | -1 |  | C20H25N7O6 | N5-methyl-tetrahydrofolate/ N5-methyl-5,6,7,8-tetrahydrofolate/ 5-methyl-5,6,7,8-tetrahydrofolate | C00440
5mtr | 5-Methylthio-D-ribose | C6H12O4S | 0 |  | C6H12O4S | S5-Methyl-5-thio-D-ribose | [NAME]
5odhf2a | 5-Oxo-4,5-dihydrofuran-2-acetate | C6H5O4 | -1 |  | C6H6O4 | 2-Oxo-2,3-dihydrofuran-5-acetate/ 3-Oxoadipate enol-lactone/ 4,5-Dihydro-5-oxofuran-2-acetate | C03586
5prdmbz | N1-(5-Phospho-alpha-D-ribosyl)-5,6-dimethylbenzimidazole | C14H17N2O7P | -2 |  | C14H19N2O7P |  | C04778
6pgc | 6-Phospho-D-gluconate | C6H10O10P | -3 |  | C6H13O10P | 6-phosphogluconic acid/ D-gluconate 6-phosphate | C00345
6pgl | 6-phospho-D-glucono-1,5-lactone | C6H9O9P | -2 |  | C6H11O9P | D-Glucono-1,5-lactone 6-phosphate | C01236
78dhp | (6R)-6-(L-erythro-1,2-Dihydroxypropyl)-7,8-dihydro-6H-pterin | C9H12N4O2 | 0 |  | C9H12N4O2 |  | C06487
8aonn | 8-Amino-7-oxononanoate | C9H17NO3 | 0 |  | C9H17NO3 | 7-keto-8-aminopelargonate | C01092
ACP | acyl carrier protein | HX | 0 |  | HX |  | C00229
Cr(OH)3 | Cr(OH)3 | CrO3H3 | 0 |  | CrO3H3
aacoa | Acetoacetyl-CoA | C25H36N7O18P3S | -4 | 1420-36-6 | C25H40N7O18P3S | Acetoacetyl coenzyme A/ 3-ketobutanoyl-CoA/ 3-oxobutyroyl-CoA/ 3-acetoacetyl-CoA/ 3-ketobutyroyl-CoA/ 3-oxobutanoyl-CoA | [NAME]
ac | Acetate | C2H3O2 | -1 | 64-19-7 | C2H4O2 | Acetic acid/ Ethanoic acid/ vinegar/ Ethylic acid/ Vinegar acid/ Methanecarboxylic acid | C00033
acACP | Acetyl-ACP | C2H3OX | 0 |  | C2H3OX |  | C03939
acac | Acetoacetate | C4H5O3 | -1 | 541-50-4 |  | 3-Oxobutanoic acid/ beta[NAME] acid/ Acetoacetic acid | C00164
[NAME] | Acetaldehyde | C2H4O | 0 | 75-07-0 | C2H4O | Ethanal/ [NAME] Acetic aldehyde/ Ethyl aldehyde/ Aldehyde | C00084
accoa | Acetyl-CoA | C23H34N7O17P3S | -4 | 72-89-9 | C23H38N7O17P3S | Acetyl coenzyme A | C00024
acg5p | N-Acetyl-L-glutamyl 5-phosphate | C7H9NO8P | -3 |  | C7H12NO8P | N-Acetyl-L-glutamate 5-phosphate | C04133
acg5sa | N-Acetyl-L-glutamate 5-semialdehyde | C7H10NO4 | -1 |  | C7H11NO4 | 2-Acetamido-5-oxopentanoate | C01250
acgam | N-Acetyl-D-glucosamine | C8H15NO6 | 0 | 7512-17-6 | C8H15NO6 | N-Acetylchitosamine/ 2-Acetamido-2-deoxy-D-glucose/ GlcNAc | C00140
acgam1p | N-Acetyl-D-glucosamine 1-phosphate | C8H14NO9P | -2 |  | C8H16NO9P |  | C04256
acgam6p | N-Acetyl-D-glucosamine 6-phosphate | C8H14NO9P | -2 | 102029-88-9 | C8H16NO9P |  | C00357
acglu | N-Acetyl-L-glutamate | C7H9NO5 | -2 | 1188-37-0 | C7H11NO5 | N-Acetyl-L-glutamic acid | C00624
achms | O-Acetyl-L-homoserine | C6H11NO4 | 0 |  | C6H11NO4 |  | C01077
acmalt | Acetyl-maltose | C14H24O12 | 0 |  | C14H24O12 |  | C02130
acmam | N-Acetyl-D-muramoate | C11H18NO8 | -1 | 91-64-5 | C11H19NO8 |  | C05887
acmama | N-Acetyl-D-muramoyl-L-alanine | C14H23N2O9 | -1 | 2497-02-01 00:00:00 | C14H24N2O9 | N-Acetylmuramoyl-Ala | C02999
acorn | N2-Acetyl-L-ornithine | C7H14N2O3 | 0 |  | C7H14N2O3 |  | C00437
acser | O-Acetyl-L-serine | C5H9NO4 | 0 | 66638-22-0 | C5H9NO4 | [NAME] | C00979
actACP | Acetoacetyl-ACP | C4H5O2X | 0 | 7783-08-06 00:00:00 | C4H5O2X | Acetoacetyl-[acyl-carrier protein]/ Acetoacetyl-[acp] | C05744
actp | Acetyl phosphate | C2H3O5P | -2 | 19926-71-7 | C2H5O5P |  | C00227
[NAME] | Adenosyl cobinamide | C58H84CoN16O11 | 1 |  | C58H84CoN16O11 |  | C06508
adcobap | Adenosyl cobinamide phosphate | C58H83CoN16O14P | -1 |  | C58H85CoN16O14P |  | C06509
adcobdam | Adenosyl cobyrinate diamide | C55H68CoN11O15 | -4 |  | C55H73CoN11O15 |  | C06506
adcobhex | adenosyl-cobyric acid | C55H76CoN15O11 | 0 |  | C55H77CoN15O11 |  | C06507
ade | Adenine | C5H5N5 | 0 | 73-24-5 | C5H5N5 | Ade/ 1H-Purin-6-amine/ Adeninimine/ Vitamin B4/ 6-Aminopurine/ A | [NAME]
adgcoba | Adenosine-GDP-cobinamide | C68H95CoN21O21P2 | -1 | 7625-23-2 | C68H97CoN21O21P2 |  | C06510
adn | Adenosine | C10H13N5O4 | 0 | 58-61-7 | C10H13N5O4 | Adenine riboside/ 9-beta-D-Ribofuranosyladenine/ Adenocard/ 9-B-D-ribofuranosyl-9H-purin-6-amine/ rA | C00212
adp | ADP | C10H12N5O10P2 | -3 | 20398-34-9 | C10H15N5O10P2 | Adenosine 5'-diphosphate | C00008
adpglc | ADPglucose | C16H23N5O15P2 | -2 |  | C16H25N5O15P2 | Adenosine diphosphoglucose | C00498
adphep-D,D | ADP-D-glycero-D-manno-heptose | [NAME] | -2 |  | C17H27N5O16P2 |  | C06397
agm | Agmatine | C5H16N4 | 2 | 306-60-5 | C5H14N4 | (4-Aminobutyl) guanidine | C00179
agpe | acyl-glycerophosphoethanolamine | C6H13NO7PR | 0 |  | C6H13NO7PR
agpg | acyl-glycerophosphoglycerol | C7H13O9PR | -1 |  | C7H14O9PR
ahcys | S-Adenosyl-L-homocysteine | C14H20N6O5S | 0 | 979-92-0 | C14H20N6O5S | S-Adenosylhomocysteine | C00021
ahdt | 2-Amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl)dihydropteridine triphosphate | C9H12N5O13P3 | -4 |  | C9H16N5O13P3 |  | C04895
aicar | 5-Amino-1-(5-Phospho-D-ribosyl)imidazole-4-carboxamide | C9H13N4O8P | -2 | 3031-94-5 | C9H15N4O8P | 1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide/ 5'-Phosphoribosyl-5-amino-4-imidazolecarboxamide/ 5'-Phospho-ribosyl-5-amino-4-imidazole carboxamide/ AICAR/ 5-Aminoimidazole-4-carboxamide ribotide/ 5-Phosphoribosyl-4-carbamoyl-5-aminoimidazole | C04677
air | 5-amino-1-(5-phospho-D-ribosyl)imidazole | C8H12N3O7P | -2 | 25635-88-5 | C8H14N3O7P | [NAME] 1-(5'-Phosphoribosyl)-5-aminoimidazole/ 5'-Phosphoribosyl-5-aminoimidazole/ 1-(5-Phospho-D-ribosyl)-5-aminoimidazole | C03373
akg | 2-Oxoglutarate | C5H4O5 | -2 | 328-50-7 | C5H6O5 | alpha-Ketoglutarate/ Oxoglutaric acid/ 2-Ketoglutaric acid/ 2-Oxopentanedioic acid/ alpha-Ketoglutaric Acid | C00026
ala-B | beta-Alanine | C3H7NO2 | 0 | 107-95-9 | C3H7NO2 | 3-aminopropionic acid/ 3-Aminopropanoate | C00099
ala-D | D-Alanine | C3H7NO2 | 0 | 338-69-2 | C3H7NO2 | D-2-Aminopropionic acid | C00133
ala-L | L-Alanine | C3H7NO2 | 0 | 56-41-7 | C3H7NO2 | L-2-Aminopropionic acid/ L-alpha-Alanine | C00041
[NAME] | D-Alanyl-D-alanine | C6H12N2O3 | 0 | 923-16-0 | C6H12N2O3 |  | C00993
alac-S | (S)-2-Acetolactate | [NAME] | -1 |  | C5H8O4 | (S)-2-Hydroxy-2-methyl-3-oxobutanoate | C06010
[NAME] | L-Alanyl-tRNA(Ala) | C3H7NO2X | 1 |  | C3H6NO2X | L-Alanyl-tRNA | C00886
amet | S-Adenosyl-L-methionine | C15H23N6O5S | 1 | 29908-03-0 | C15H23N6O5S | Acylcarnitine/ S-Adenosylmethionine | C00019
ametam | S-Adenosylmethioninamine | C14H24N6O3S | 2 |  | C14H23N6O3S | S-Adenosyl-L-methioninamine/ (5-Deoxy-5-adenosyl)(3-aminopropyl)methylsulfonium salt | C01137
amob | S-Adenosyl-4-methylthio-2-oxobutanoate | C15H19N5O6S | 0 |  | C15H20N5O6S |  | C04425
amp | AMP | C10H12N5O7P | -2 | 61-19-8 | C10H14N5O7P | Adenosine 5'-monophosphate/ Adenylic acid/ Adenylate/ 5'-AMP/ 5'-Adenylic acid/ 5'-Adenosine monophosphate/ Adenosine 5'-phosphate | C00020
anth | Anthranilate | C7H6NO2 | -1 | 118-92-3 | C7H7NO2 | [NAME] acid/ o-Aminobenzoic acid/ [NAME] L1/ 2-Aminobenzoate | C00108
ap4a | P1,P4-Bis(5'-adenosyl) tetraphosphate | C20H24N10O19P4 | -4 |  |  | AppppA | C01260
ap5a | P1,P5-Bis(5'-adenosyl) pentaphosphate | C20H24N10O22P5 | -5 | 4637-56-3 | C20H29N10O22P5 | Bis(5'-adenosyl) pentaphosphate | C04058
apoACP | apoprotein [acyl carrier protein] | RHO | 0 |  | RHO |  | C03688
aps | Adenosine 5'-phosphosulfate | C10H12N5O10PS | -2 |  | C10H14N5O10PS | Adenylylsulfate/ APS | C00224
ara5p | D-Arabinose 5-phosphate | C5H9O8P | -2 |  | C5H11O8P |  | C01112
arg-L | L-Arginine | C6H15N4O2 | 1 | 74-79-3 | C6H14N4O2 | Arginine/ Arg/ (S)-2-Amino-5-guanidinovaleric acid | C00062
[NAME] | N(omega)-(L-Arginino)succinate | C10H17N4O6 | -1 |  | C10H18N4O6 | N-(L-Arginino)succinate/ L-Argininosuccinate/ L-Argininosuccinic acid/ L-Arginosuccinic acid | C03406
argtrna | L-Arginyl-tRNA(Arg) | C6H15N4O2X | 2 |  | C6H13N4O2X | L-Arginyl-tRNA | C02163
arsna | Arsenate | AsHO4 | -2 | 7778-39-4 | AsH3O4 | Arsenic acid/ Orthoarsenic acid | C01478
arsni2 | arsenite | AsH3O3 | 0 | 15502-74-6 | AsH3O3 |  | C06697
asn-L | L-Asparagine | C4H8N2O3 | 0 | 70-47-3 | C4H8N2O3 | 2-Aminosuccinamic acid/ Arg/ 2-Amino-3-carbamoylpropanoic acid | C00152
asntrna | L-Asparaginyl-tRNA(Asn) | C4H8N2O3X | 1 |  | C4H7N2O3X |  | C03402
asp-L | L-Aspartate | C4H6NO4 | -1 | 56-84-8 | C4H7NO4 | Asp/ L-Aspartic acid/ 2-aminosuccinic acid | C00049
aspsa | L-Aspartate 4-semialdehyde | C4H7NO3 | 0 |  | C4H7NO3 | Aspartate beta-semialdehyde/ L-Aspartic 4-semialdehyde | C00441
asptrna | L-Aspartyl-tRNA(Asp) | C4H6NO4X | 0 |  | C4H6NO4X |  | [NAME]
atp | ATP | C10H12N5O13P3 | -4 | 56-65-5 | C10H16N5O13P3 | Adenosine 5'-triphosphate/ 5'-adenylate triphosphate | C00002
btcoa | Butanoyl-CoA | C25H38N7O17P3S | -4 |  | C25H42N7O17P3S | Butyryl-CoA | C00136
btn | Biotin | C10H15N2O3S | -1 | 58-85-5 | C10H16N2O3S | Vitamin B7/ D-Biotin/ Vitamin H/ Coenzyme R | C00120
but | Butyrate | C4H7O2 | -1 | 107-92-6 | C4H8O2 | Butanoate/ Butyric acid/ Butanoic acid | [NAME]
ca2 | Calcium | Ca | 2 | 7440-70-2 | Ca | Ca2+ | C00076
camp | cAMP | C10H11N5O6P | -1 | 60-92-4 | C10H12N5O6P | 3'-5' cAMP/ Adenosine 3',5'-phosphate/ cyclic adenosine monophosphate/ 3',5'-Cyclic AMP/ Adenosine 3'-,5'-cyclic monophosphate/ 3'-5' cyclic adenosine monophosphate/ cyclic AMP/ Adenosine 3[-,5[-cyclic monophosphate/ Adenosine Cyclic 3':5'-Monophosphate/ Cyclic adenylic acid | C00575
cbasp | N-Carbamoyl-L-aspartate | C5H6N2O5 | -2 |  | C5H8N2O5 |  | C00438
cbi | Cobinamide | C48H72CoN11O8 | 0 | 1867-62-5 | C48H72CoN11O8 |  | C05774
cbl1 | Cob(I)alamin | C62H88CoN13O14P | -1 |  | [NAME] |  | C00853
cbp | Carbamoyl phosphate | CH2NO5P | -2 |  | CH4NO5P |  | C00169
cdp | CDP | C9H12N3O11P2 | -3 | 63-38-7 | C9H15N3O11P2 | Cytidine 5'-diphosphate/ Cytidine diphosphate | C00112
cdpdag | CDPdiacylglycerol | C14H17N3O15P2R2 | -2 |  | C14H19N3O15P2R2 | CDP-1,2-diacylglycerol | C00269
ch4s | [NAME] | CH4S | 0 | 74-93-1 |  | Methylmercaptan/ Methyl Mercaptan | C00409
[NAME] | Chitobiose | C16H28N2O11 | 0 | 35061-50-8 | C16H28N2O11 |  | C01674
chor | Chorismate | C10H8O6 | -2 | 55508-12-8 | C10H10O6 | Chorismic acid | C00251
cinnm | trans-Cinnamate | C9H7O2 | -1 | 140-10-3 | C9H8O2 | trans-Cinnamic acid | C00423
cit | Citrate | C6H5O7 | -3 | 77-92-9 | C6H8O7 | Citric acid/ 2-Hydroxytricarballylic acid/ 2-Hydroxy-1,2,3-propanetricarboxylic acid | C00158
citr-L | L-Citrulline | C6H13N3O3 | 0 | 372-75-8 | C6H13N3O3 | N5-(aminocarbonyl)-L-Ornithine/ Citrulline/ 2-Amino-5-ureidovaleric acid | C00327
ckdo | CMP-3-deoxy-D-manno-octulosonate | C17H24N3O15P | -2 |  | C17H26N3O15P | CMP-KDO | C04121
ckdo8n | CMP-8-amino-3,8-dideoxy-D-manno-oct-2-ulosonic acid | C17H26N4O14P | -1 |  | C17H27N4O14P
cl | Chloride | Cl | -1 |  | Cl |  | C00115
cm | Chloramphenicol | C11H12Cl2N2O5 | 0 | 56-75-7 | C11H12Cl2N2O5 |  | C00918
cmac | Chloramphenicol 3-acetate | C13H14Cl2N2O6 | 0 | 838-07-3 | C13H14Cl2N2O6 | Chloramphenicol 3-acetate | C03601
cmp | CMP | C9H12N3O8P | -2 | 84-52-6 | C9H14N3O8P | Cytidine-5'-monophosphate/ Cytidylic acid/ 3'-Cytidylic Acid/ cytidine 3'-phosphate/ Cytidine-2'(3')-monophosphoric acid/ Cytidine-2[(3[)-monophosphoric acid | C00055
co2 | CO2 | CO2 | 0 | 124-38-9 | CO2 | Carbonic anhydride/ Carbon dioxide | C00011
coa | Coenzyme A | C21H32N7O16P3S | -4 | 85-61-0 | C21H36N7O16P3S | CoA/ CoA-SH/ CoASH | C00010
cobalt2 | Co2+ | Co | 2 | 7440-48-4 | Co | Cobalt | C00175
[NAME] | Co3+ | Co | 3 |  | Co
cobamcoa | Cobamide coenzyme | C72H100CoN18O17P | 0 |  | C72H101CoN18O17P |  | C00194
confald | [NAME] | C10H10O3 | 0 | 458-36-6 | C10H10O3 |  | C02666
[NAME] | Coproporphyrinogen III | C36H40N4O8 | -4 | 2624-63-7 | C36H44N4O8 |  | C03263
cro4 | chromate | CrO4 | -2 |  | CrH2O4
csn | Cytosine | C4H5N3O | 0 | 71-30-7 |  |  | C00380
[NAME] | CTP | C9H12N3O14P3 | -4 | 65-47-4 | C9H16N3O14P3 | Cytidine 5'-triphosphate/ Cytidine triphosphate | C00063
cu2 | Cu2+ | Cu | 2 |  | Cu | Copper | C00070
[NAME] | cyanide | HCN | 0 |  | HCN | HCN/ Hydrogen cyanide | C01326
[NAME] | L-Cysteine | C3H7NO2S | 0 | 52-90-4 | C3H7NO2S | [NAME] acid | C00097
cysth-L | L-Cystathionine | C7H14N2O4S | 0 | 56-88-2 | C7H14N2O4S |  | C02291
cystrna | L-Cysteinyl-tRNA(Cys) | C3H7NO2SX | 1 |  | C3H6NO2SX |  | C03125
cytd | Cytidine | C9H13N3O5 | 0 | 65-46-3 |  | 1-beta-ribofuranosylosine/ cytosine riboside/ 4-amino-1-beta-D-ribofuranosyl-2(1H)-pyrimidinone | C00475
dad-2 | [NAME] | C10H13N5O3 | 0 | 958-09-8 |  | dA/ 2'-Deoxyadenosine | C00559
dad-5 | 5'-Deoxyadenosine | C10H13N5O3 | 0 |  | C10H13N5O3 |  | C05198
dadp | dADP | C10H12N5O9P2 | -3 |  | C10H15N5O9P2 | 2'-Deoxyadenosine 5'-diphosphate | C00206
damp | dAMP | C10H12N5O6P | -2 | 653-63-4 | C10H14N5O6P | 2'-Deoxyadenosine 5'-phosphate/ 2'-Deoxyadenosine 5'-monophosphate/ Deoxyadenylic acid/ Deoxyadenosine monophosphate | C00360
dann | 7,8-Diaminononanoate | C9H21N2O2 | 1 |  | C9H20N2O2 |  | C01037
datp | dATP | C10H12N5O12P3 | -4 | 1927-31-7 | C10H16N5O12P3 | 2'-Deoxyadenosine 5'-triphosphate/ [NAME] 5'-triphosphate/ [NAME] triphosphate | C00131
[NAME] | 3,4-dihydroxy-2-butanone 4-phosphate | C4H7O6P | -2 |  | C4H9O6P | 3,4-dihydroxy-2-butanone-4-P/ DIHYDROXY-BUTANONE-P
dcamp | N6-(1,2-Dicarboxyethyl)-AMP | C14H14N5O11P | -4 |  | C14H18N5O11P | Adenylosuccinate/ Adenylosuccinic acid | C03794
dcdp | dCDP | C9H12N3O10P2 | -3 |  | C9H15N3O10P2 | 2'-Deoxycytidine diphosphate/ 2'-Deoxycytidine 5'-diphosphate | C00705
[NAME] | dCMP | [NAME] | -2 | 1032-65-1 | C9H14N3O7P | Deoxycytidylic acid/ Deoxycytidine monophosphate/ Deoxycytidylate/ 2'-Deoxycytidine 5'-monophosphate | C00239
dctp | dCTP | C9H12N3O13P3 | -4 | 2056-98-6 | C9H16N3O13P3 | Deoxycytidine 5'-triphosphate/ Deoxycytidine triphosphate/ 2'-Deoxycytidine 5'-triphosphate | C00458
dcyt | Deoxycytidine | C9H13N3O4 | 0 | 951-77-9 |  | 2'-Deoxycytidine/ dC | C00881
ddcaACP | Dodecanoyl-ACP (n-C12:0ACP) | C12H23OX | 0 |  | C12H23OX
dgdp | dGDP | C10H12N5O10P2 | -3 |  | C10H15N5O10P2 | 2'-Deoxyguanosine 5'-diphosphate | C00361
dgmp | dGMP | C10H12N5O7P | -2 | 902-04-5 | C10H14N5O7P | 2'-Deoxyguanosine 5'-monophosphate/ 2'-Deoxyguanosine 5'-phosphate/ Deoxyguanylic acid/ Deoxyguanosine monophosphate | C00362
dgsn | Deoxyguanosine | C10H13N5O4 | 0 | 961-07-9 | C10H13N5O4 | 2'-deoxyguanosine hemihydrate/ 2'-Deoxyguanosine | C00330
dgtp | dGTP | C10H12N5O13P3 | -4 | 2564-35-4 | C10H16N5O13P3 | 2'-Deoxyguanosine 5'-triphosphate/ Deoxyguanosine 5'-triphosphate/ Deoxyguanosine triphosphate | C00286
dhap | Dihydroxyacetone phosphate | C3H5O6P | -2 | 57-04-5 | C3H7O6P | Glycerone phosphate | C00111
dhbpt | 6,7-Dihydrobiopterin | C9H13N5O3 | 0 | 6779-87-9 | C9H13N5O3 | [NAME] Dihydrobiopterin | C00268
dhf | 7,8-Dihydrofolate | C19H19N7O6 | -2 | 4033-27-6 | C19H21N7O6 | [NAME] acid/ Dihydrofolate/ Dihydrofolic acid | C00415
dhna | 1,4-Dihydroxy-2-naphthoate | C11H7O4 | -1 |  | C11H8O4 |  | C03657
dhnpt | 2-Amino-4-hydroxy-6-(D-erythro-1,2,3-trihydroxypropyl)-7,8-dihydropteridine | C9H13N5O4 | 0 |  |  | Dihydroneopterin | C04874
dhor-S | (S)-Dihydroorotate | C5H5N2O4 | -1 | 5988-19-2 | C5H6N2O4 | L-Dihydroorotic acid/ Dihydro-L-orotic acid/ L-Dihydroorotate/ (S)-4,5-Dihydroorotate | C00337
dhpmp | Dihydroneopterin monophosphate | C9H12N5O7P | -2 |  | C9H14N5O7P | 2-Amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl)dihydropteridine phosphate/ Dihydroneopterin phosphate | C05925
dhpt | Dihydropteroate | C14H13N6O3 | -1 |  | C14H14N6O3 | 7,8-Dihydropteroate | C00921
dhptd | 4,5-dihydroxy-2,3-pentanedione | C5H8O4 | 0 |  | C5H8O4 | 4,5-dihydroxypentane-2,3-dione | C11838
din | Deoxyinosine | C10H12N4O4 | 0 | 890-38-0 |  | 2'-deoxy-inosine | C05512
dkmpp | 2,3-diketo5-methylthio-1-phosphopentane | C6H9O6PS | -2 | 115974-73-7 | C6H11O6PS | 1-phosphoryloxy-2,3-diketo-5-methylthiopentane/ Decanoic acid, 1-heptyl-2-((1-oxodecyl)amino)-1,3-propanediyl ester, (R*,R*)-/ 2,3-diketo-5-methylthio-1-phosphopentane/ 1-Phospho-2,3-diketo-5-S-methylthiopentane/ DKM-1-P/ 1-phospho-2,3-diketo-5-methylthiopentane/ 1-Pdmsp
dmbzid | 5,6-Dimethylbenzimidazole | C9H10N2 | 0 | 582-60-5 | C9H10N2 | Dimethylbenzimidazole | C03114
dmlz | 6,7-Dimethyl-8-(1-D-ribityl)lumazine | C13H18N4O6 | 0 |  | C13H18N4O6 |  | [NAME]
dmpp | Dimethylallyl diphosphate | C5H9O7P2 | -3 | 358-71-4 | [NAME] | 2-Isopentenyl diphosphate/ delta2-Isopentenyl diphosphate/ Prenyl diphosphate/ dimethylallyl pyrophosphate | C00235
dms | Dimethyl sulfide | C2H6S | 0 | 75-18-3 | C2H6S | [NAME] thioether | C00580
dmso | Dimethyl sulfoxide | C2H6OS | 0 | 67-68-5 | C2H6OS | [NAME] DMSO/ [NAME] Infiltrina/ [NAME] | C11143
dna_Son | DNA, Shewanella oneidensis MR-1 | C977H1127N373O600P100 | -100 |  | C977H1227N373O600P100
dnad | Deamino-NAD+ | C21H24N6O15P2 | -2 |  | C21H27N6O15P2 | Deamido-NAD+ | C00857
dpcoa | Dephospho-CoA | C21H33N7O13P2S | -2 |  | C21H35N7O13P2S |  | C00882
[NAME] | Deoxyribose | C5H10O4 | 0 | 533-67-5 | C5H10O4 | 2-Deoxy-beta-D-erythro-pentose/ Thyminose/ 2-Deoxy-D-ribose | C01801
dtbt | Dethiobiotin | C10H17N2O3 | -1 |  | C10H18N2O3 | Desthiobiotin | C01909
[NAME] | dTDP | C10H13N2O11P2 | -3 |  | C10H16N2O11P2 | Thymidine 5'-diphosphate | C00363
dtdp6dm | [NAME]-mannose | C16H24N2O15P2 | -2 | 572-96-3 | C16H26N2O15P2 | [NAME]-mannose/ dTDP-L-rhamnose | C03319
dtdpddg | dTDP-4-dehydro-6-deoxy-D-glucose | C16H22N2O15P2 | -2 |  | C16H24N2O15P2 | dTDP-4-oxo-6-deoxy-D-glucose | C00687
dtdpddm | dTDP-4-dehydro-6-deoxy-L-mannose | C16H22N2O15P2 | -2 |  | C16H24N2O15P2 | dTDP-4-oxo-6-deoxy-L-mannose/ dTDP-4-oxo-L-rhamnose | C00688
dtdpglc | dTDPglucose | [NAME] | -2 |  | [NAME] | dTDP-D-glucose | C00842
dtmp | dTMP | C10H13N2O8P | -2 | 365-07-1 | C10H15N2O8P | Thymidine 5'-phosphate/ Deoxythymidine 5'-phosphate/ Thymidylic acid/ 5'-Thymidylic acid/ Thymidine monophosphate/ Deoxythymidylic acid/ Thymidylate | C00364
dttp | dTTP | C10H13N2O14P3 | -4 |  | C10H17N2O14P3 | [NAME] 5'-triphosphate/ TTP | C00459
dudp | dUDP | C9H11N2O11P2 | -3 |  | C9H14N2O11P2 | 2'-Deoxyuridine 5'-diphosphate | C01346
dump | dUMP | C9H11N2O8P | -2 | 964-26-1 | C9H13N2O8P | [NAME] monophosphate/ Deoxyuridine 5'-phosphate/ 2'-Deoxyuridine 5'-phosphate | C00365
duri | [NAME] | C9H12N2O5 | 0 | 951-78-0 |  | 2-Deoxyuridine/ 2'-Deoxyuridine | C00526
dutp | dUTP | C9H11N2O14P3 | -4 |  | C9H15N2O14P3 | 2'-Deoxyuridine 5'-triphosphate | C00460
dxyl5p | 1-deoxy-D-xylulose 5-phosphate | C5H9O7P | -2 |  | C5H11O7P |  | C11437
e4p | D-Erythrose 4-phosphate | C4H7O7P | -2 | 585-18-2 | [NAME] | 4-phospho D-erythrose | C00279
[NAME] | D-erythro-1-(Imidazol-4-yl)glycerol 3-phosphate | C6H9N2O6P | -2 |  | C6H11N2O6P | D-erythro-Imidazole-glycerol 3-phosphate/ D-erythro-Imidazole-glycerol phosphate | C04666
etha | Ethanolamine | C2H8NO | 1 | 141-43-5 | C2H7NO | Aminoethanol/ Hydroxyethylamine | C00189
etoh | Ethanol | C2H6O | 0 | 64-17-5 |  | Ethyl alcohol/ Methylcarbinol | C00469
f6p | D-Fructose 6-phosphate | C6H11O9P | -2 | 643-13-0 | C6H13O9P | D-Fructose 6-phosphoric acid/ Neuberg ester/ beta-D-Fructose 6-phosphate | C00085
fa1 | Fatty acid (Iso-C14:0) | C14H27O2 | -1 |  | C14H28O2
fa11 | Fatty acid (Iso-C17:0) | C17H33O2 | -1 |  | C17H34O2
fa11ACP | Iso-C17:0 ACP | C17H33O1X | 0 |  | C17H33O1X
fa13 | Iso-C13:0 | C13H25O2 | -1 |  | C13H26O2
fa13ACP | Iso-C13:0 ACP | C13H25OX | 0 |  | C13H25OX
fa14ACP | Fatty Acid (n-C5:0 ACP) | C5H9OX | 0 |  | C5H9OX
fa1ACP | Iso-C14:0 ACP | C14H27OX | 0 |  | C14H27OX
fa3 | Fatty acid (Iso-C15:0) | C15H29O2 | -1 |  | C15H30O2
fa3ACP | iso-C15:0 ACP | C15H29OX | 0 |  | C15H29OX
fa6 | Fatty acid (iso-C16:0) | C16H31O2 | -1 |  | C16H32O2
fa6ACP | Iso-C16:0 ACP | C16H31OX | 0 |  | C16H31OX
fa7ACP | Iso-C7:0 ACP | C7H13OX | 0 |  | C7H13OX
fa8ACP | Iso-C6:0 ACP | C6H11OX | 0 |  | C6H11OX
fad | FAD | C27H31N9O15P2 | -2 | 146-14-5 | C27H33N9O15P2 | FAD/ Flavin adenine dinucleotide/ Riboflavine 5'-adenosine diphosphate | C00016
[NAME] | Formaldehyde | CH2O | 0 | 50-00-0 |  | Formalin/ Methanal/ Oxomethane/ Oxomethylene/ Methylene oxide | C00067
fdp | D-Fructose 1,6-bisphosphate | C6H10O12P2 | -4 | 488-69-7 | C6H14O12P2 | fructose-1,6-bisphosphate/ fructose diphosphate/ beta-D-fructofuranose-1,6-diphosphate | C00354
fdxo-4:2 | ferrodoxin (oxidized form 4:2) | Fe8S8X | 0 |  | Fe8S8X
fdxr-4:2 | ferrodoxin (reduced form 4:2) | Fe8S8X | -2 |  | Fe8S8X
fe2 | Fe2+ | Fe | 2 |  | Fe | Reduced Iron/ Iron dication/ Iron/ Fe(II) | C00023
fe3 | Fe3+ | Fe | 3 |  | Fe | Iron trication/ Fe(III) | C00023
fgam | N2-Formyl-N1-(5-phospho-D-ribosyl)glycinamide | C8H13N2O9P | -2 |  | C8H15N2O9P | 5'-Phosphoribosyl-N-formylglycinamide/ N-Formyl-GAR/ N-Formylglycinamide ribonucleotide | [NAME]
fglut-S | S-Formylglutathione | C11H16N3O7S | -1 |  | C11H17N3O7S |  | C01031
ficytcc | Ferricytochrome c | C42H50FeN8O6S2 | 3 |  | C42H54FeN8O6S2 |  | C00125
fmettrna | N-Formylmethionyl-tRNA | C6H11NO3SX | 1 |  | C6H10NO3SX |  | C03294
fmn | flavin mononucleotide | C17H19N4O9P | -2 | 146-17-8 | C17H21N4O9P | Riboflavin-5-phosphate/ Flavin mononucleotide/ FMN | C00061
fmnRD | [NAME] reduced | C17H21N4O9P | -2 | 67-63-0 | C17H23N4O9P | Reduced FMN | C01847
focytcc | Ferrocytochrome c | C42H50FeN8O6S2 | 2 |  | C42H54FeN8O6S2 |  | C00126
for | Formate | CH1O2 | -1 | 64-18-6 | CH2O2 | Hydrogencarboxylic acid/ aminic acid/ Methanoic acid/ Formic acid | C00058
[NAME] | N-Formimidoyl-L-glutamate | C6H9N2O4 | -1 |  | C6H10N2O4 | N-Formimino-L-glutamate | C00439
fpram | 2-(Formamido)-N1-(5-phospho-D-ribosyl)acetamidine | C8H14N3O8P | -2 |  | C8H16N3O8P | 2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine/ 1-(5'-Phosphoribosyl)-N-formylglycinamidine/ 5'-Phosphoribosyl-N-formylglycinamidine/ 5'-Phosphoribosylformylglycinamidine | C04640
[NAME] | 5-Formamido-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide | C10H13N4O9P | -2 |  | C10H15N4O9P | 1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide/ 5'-Phosphoribosyl-5-formamido-4-imidazolecarboxamide/ 5-Formamido-1-(5-phosphoribosyl)imidazole-4-carboxamide | C04734
frdp | Farnesyl diphosphate | C15H25O7P2 | -3 | 13058-04-3 | C15H28O7P2 | Farnesyl pyrophosphate/ 2-trans,6-trans-Farnesyl diphosphate/ trans,trans-Farnesyl diphosphate | C00448
frlt | Ferulate | C10H9O4 | -1 | 1135-24-6 | C10H10O4 |  | C01494
[NAME] | Formamide | CH3NO | 0 | 75-12-7 | CH3NO | Formimidic Acid/ Carbamaldehyde/ Methanamide | [NAME]
fum | Fumarate | C4H2O4 | -2 | 110-17-8 | C4H4O4 | boletic acid/ allomaleic acid/ Fumaric acid/ Trans-butenedioic acid | C00122
g1p | D-Glucose 1-phosphate | C6H11O9P | -2 | 59-56-3 | C6H13O9P | Cori ester/ alpha-D-Glucose 1-phosphate/ Glucose 1-phosphate | C00103
[NAME] | [NAME] | C3H5O6P | -2 | 142-10-9 | C3H7O6P | D-Glyceraldehyde 3-phosphate | C00661
g3pe | sn-Glycero-3-phosphoethanolamine | C5H14NO6P | 0 |  | C5H14NO6P | Glycerophosphoethanolamine | C01233
g3pg | Glycerophosphoglycerol | C6H14O8P | -1 | 11034-93-8 | C6H15O8P |  | C03274
g6p | D-Glucose 6-phosphate | C6H11O9P | -2 | 56-73-5 | C6H13O9P | Glucose 6-phosphate/ [NAME] ester/ alpha-D-Glucose 6-phosphate | C00092
gal | D-Galactose | C6H12O6 | 0 | 59-23-4 |  | alpha-[NAME] | C00124
gal1p | alpha-D-Galactose 1-phosphate | C6H11O9P | -2 | 2255-14-3 | C6H13O9P | D-Galactose 1-phosphate/ alpha-D-Galactose 1-phosphate | C00446
gam1p | D-Glucosamine 1-phosphate | C6H13NO8P | -1 |  | C6H14NO8P |  | C06156
gam6p | D-Glucosamine 6-phosphate | C6H13NO8P | -1 | 3616-42-0 | C6H14NO8P | D-Glucosamine phosphate | C00352
gar | N1-(5-Phospho-D-ribosyl)glycinamide | C7H14N2O8P | -1 |  | C7H15N2O8P | 5'-Phosphoribosylglycinamide/ GAR/ Glycinamide ribonucleotide | C03838
gcald | [NAME] | C2H4O2 | 0 |  | C2H4O2 | Hydroxyacetaldehyde | C00266
gdp | GDP | C10H12N5O11P2 | -3 | 146-91-8 | C10H15N5O11P2 | [NAME] 5'-diphosphate/ [NAME] diphosphate | C00035
gdpdp | [NAME] 3',5'-bis(diphosphate) | C10H11N5O17P4 | -6 |  | C10H17N5O17P4 | [NAME] 3'-diphosphate 5'-diphosphate | [NAME]
gdptp | [NAME] 3'-diphosphate 5'-triphosphate | C10H11N5O20P5 | -7 |  | C10H18N5O20P5 | guanosine 5'-diphosphate 3'-triphosphate | C04494
[NAME] | Geranylgeranyl diphosphate | C20H33O7P2 | -3 |  | C20H36O7P2 | [NAME] pyrophosphate/ all-trans-Geranylgeranyl diphosphate/ all-trans-Geranylgeranyl pyrophosphate | C00353
ggluaba | gammaglutamyl-gamma-aminobutyraldehyde | C9H16N2O4 | 0 |  | C9H16N2O4 | γ-Glutamyl-γ-aminobutyral/ γ-Glutamyl-γ-aminobutyraldehyde
[NAME] | gammaglutamyl-gamma-aminobutyrate | C9H15N2O5 | -1 |  | C9H16N2O5 | γ-Glutamyl-γ-aminobutyrate/ γ-Glutamyl-γ-aminobutyric acid
[NAME] | gammaglutamyl putrescine | C9H20N3O3 | 1 |  | C9H19N3O3 | γ-Glutamyl putrescine/ γ-Glu-Put
glc-D | D-Glucose | C6H12O6 | 0 | 50-99-7 | C6H12O6 | alpha-D-Glucose/ beta-D-Glucose/ Grape sugar/ Dextrose/ Glucose | C00031
gln-L | L-Glutamine | C5H10N2O3 | 0 | 56-85-9 | C5H10N2O3 | Gln/ L-2-Aminoglutaramic acid | C00064
glntrna | L-Glutaminyl-tRNA(Gln) | C5H10N2O3X | 1 |  | C5H9N2O3X | Glutaminyl-tRNA | C02282
[NAME] | D-Glutamate | C5H8NO4 | -1 | 56-86-0 | C5H9NO4 | Glu/ D-Glutamic acid/ D-Glutaminic acid/ D-2-Aminoglutaric acid | C00217
[NAME] | L-Glutamate | C5H8NO4 | -1 | 56-86-0 | C5H9NO4 | Glu/ L-Glutamic acid/ L-Glutaminic acid | C00025
glu1sa | L-Glutamate 1-semialdehyde | C5H9NO3 | 0 |  | C5H9NO3 | (S)-4-Amino-5-oxopentanoate | C03741
glu5p | L-Glutamate 5-phosphate | C5H8NO7P | -2 |  | C5H10NO7P | L-Glutamyl 5-phosphate | C03287
glu5sa | L-Glutamate 5-semialdehyde | C5H9NO3 | 0 |  | C5H9NO3 | L-Glutamate gamma-semialdehyde | C01165
glucys | gamma-L-Glutamyl-L-cysteine | C8H13N2O5S | -1 | 686-58-8 | C8H14N2O5S | L-gamma-Glutamylcysteine/ 5-L-Glutamyl-L-cysteine | C00669
glutrna | L-Glutamyl-tRNA(Glu) | C5H8NO4X | 0 |  | C5H8NO4X |  | C02987
glx | Glyoxylate | C2H1O3 | -1 | 298-12-4 | C2H2O3 | Acetic acid/ Glyoxalate/ [NAME] acid | C00048
gly | Glycine | C2H5NO2 | 0 | 56-40-6 | C2H5NO2 | Aminoacetic acid/ Gly | C00037
gly-asp-L | gly-asp-L | C6H9N2O5 | -1 |  | C6H10N2O5 | glycyl-L-aspartate/ N-glycyl-L-aspartate/ glycyl-L-aspartic acid/ N-glycyl-L-aspartic acid
gly-glu-L | gly-glu-L | C7H11N2O5 | -1 |  | C7H12N2O5 | glycyl-L-glutamic acid/ glycyl-L-glutamate
glyc | Glycerol | C3H8O3 | 0 | 56-81-5 | C3H8O3 | 1,2,3-trihydroxypropane/ Glycerin/ 1,2,3-propanetriol | C00116
glyc-R | (R)-Glycerate | C3H5O4 | -1 | 473-81-4 | C3H6O4 | D-Glycerate/ Glycerate/ [NAME] acid | C00258
glyc3p | sn-Glycerol 3-phosphate | C3H7O6P | -2 | 57-03-4 | C3H9O6P | Glycerophosphoric acid/ [NAME] glycerol/ sn-Gro-1-P/ Glycerol-3-phosphate | C00093
glyclt | Glycolate | C2H3O3 | -1 | 79-14-1 | C2H4O3 | Glycolic acid/ Hydroxyacetic acid | C00160
glycogen | glycogen | [NAME] | 0 |  | [NAME] |  | C00182
glytrna | Glycyl-tRNA(Gly) | C2H5NO2X | 1 |  | C2H4NO2X |  | C02412
gmh17bp | [NAME]heptose 1,7-bisphosphate | C7H12O13P2 | -4 |  | C7H16O13P2 | C11472 | C11472
gmh1p | [NAME]heptose 1-phosphate | C7H13O10P | -2 |  | C7H15O10P | C07838 | C07838
gmh7p | [NAME]heptose 7-phosphate | C7H13O10P | -2 |  | C7H15O10P | C07836 | C07836
gmp | GMP | C10H12N5O8P | -2 | 85-32-5 | C10H14N5O8P | [NAME] 5'-phosphate/ [NAME] acid | C00144
gp4g | P1,P4-Bis(5'-guanosyl) tetraphosphate | C20H24N10O21P4 | -4 |  |  | Bis(5'-guanosyl) tetraphosphate/ GppppG | C01261
grdp | Geranyl diphosphate | C10H17O7P2 | -3 |  | C10H20O7P2 |  | C00341
gsn | [NAME] | C10H13N5O5 | 0 | 118-00-3 |  | rG/ Guanine riboside | C00387
gthox | Oxidized glutathione | [NAME] | -2 |  | C20H32N6O12S2 | Glutathione disulfide/ L-Glutathione oxidized | C00127
[NAME] | Reduced glutathione | C10H16N3O6S | -1 | 70-18-8 | C10H17N3O6S | Glutathione/ 5-L-Glutamyl-L-cysteinylglycine/ N-(N-gamma-L-Glutamyl-L-cysteinyl)glycine/ gamma-L-Glutamyl-L-cysteinyl-glycine | C00051
gtp | GTP | C10H12N5O14P3 | -4 | 86-01-1 | C10H16N5O14P3 | [NAME] 5'-triphosphate | C00044
gua | Guanine | C5H5N5O | 0 | 73-40-5 | C5H5N5O | 2-Aminohypoxanthine/ G/ 2-Amino-6-hydroxypurine | C00242
h | H+ | H | 1 | 12408-02-5 | H | Hydrogen Ion/ Proton | C00080
h2 | H2 | H2 | 0 | 1333-74-0 | H2 | Hydrogen | C00282
h2mb4p | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate | C5H9O8P2 | -3 |  | C5H12O8P2 |  | C11811
h2o | H2O | H2O | 0 | 7732-18-5 | H2O | Water/ Dihydrogen oxide | C00001
h2o2 | Hydrogen peroxide | H2O2 | 0 | 7722-84-1 | H2O2 | peroxide/ hydrogen dioxide/ H2O2 | C00027
h2s | Hydrogen sulfide | HS | -1 | 7783-06-04 00:00:00 | H2S | H2S/ Hydrogen-sulfide | C00283
hco3 | Bicarbonate | CHO3 | -1 | 71-52-3 | CH2O3 | Acid carbonate/ HCO3-/ Hydrogencarbonate | C00288
hcys-L | L-Homocysteine | C4H9NO2S | 0 | 6027-13-0 | C4H9NO2S | L-Homocysteine/ L-2-Amino-4-mercaptobutyric acid | C00155
hdca | hexadecanoate (n-C16:0) | C16H31O2 | -1 | 57-10-3 | C16H32O2 | Hexadecanoate/ Palmitic acid/ Hexadecanoic acid/ Hexadecylic acid/ Cetylic acid/ Fatty acid (Palmitate, n-C16:0) | C00249
hdcea | hexadecenoate (n-C16:1) | C16H29O2 | -1 | 25447-95-4 | C16H30O2 | Fatty acid (n-C16:1)/ Hexadecenoic acid
hdeACP | Hexadecenoyl-ACP (n-C16:1ACP) | C16H29OX | 0 |  | C16H29OX
hemeO | Heme O | C49H56FeN4O5 | -2 | 137397-56-9 | C49H58FeN4O5
hepdp | all-trans-Heptaprenyl diphosphate | [NAME] | -3 |  | C35H60O7P2 |  | C04216
hexdp | all-trans-Hexaprenyl diphosphate | [NAME] | -3 |  | C30H52O7P2 |  | C01230
hg2 | Mercury (charged +2) | Hg | 2 |  | Hg | Mercury/ Hg2+/ HHg | C00703
hgentis | Homogentisate | [NAME] | -1 | 451-13-8 | C8H8O4 | Homogentisic acid/ 2,5-Dihydroxyphenylacetate/ 2,5-Dihydroxyphenylacetic acid | C00544
his-L | L-Histidine | C6H9N3O2 | 0 | 71-00-1 | C6H9N3O2 | His/ Glyoxaline-5-alanine/ (S)-alpha-Amino-1H-imidazole-4-propionic acid | C00135
hisp | L-Histidinol phosphate | C6H11N3O4P | -1 | 25679-93-0 | C6H12N3O4P |  | C01100
histd | L-Histidinol | C6H12N3O | 1 |  | C6H11N3O |  | C00860
histrna | L-Histidyl-tRNA(His) | C6H9N3O2X | 1 |  | C6H8N3O2X |  | C02988
hmbil | Hydroxymethylbilane | C40H38N4O17 | -8 | 73023-76-4 | C40H46N4O17 |  | C01024
hmgcoa | Hydroxymethylglutaryl-CoA | C27H39N7O20P3S | -5 | 1553-55-5 | C27H44N7O20P3S | (S)-3-Hydroxy-3-methylglutaryl-CoA/ Hydroxymethylglutaroyl coenzyme A/ 3-Hydroxy-3-methylglutaryl-CoA/ HMG-CoA | C00356
hmglut-S | S-(Hydroxymethyl)glutathione | C11H18N3O7S | -1 | 32260-87-0 | C11H19N3O7S |  | C14180
hom-L | L-Homoserine | C4H9NO3 | 0 | 672-15-1 | C4H9NO3 | 2-Amino-4-hydroxybutyric acid | C00263
hpdACP | heptadecanoyl-ACP (n-C17:0ACP) | C17H33OX | 0 |  | C17H33OX
[NAME] | heptadecanoate (n-C17:0) | C17H33O2 | -1 | 506-12-7 | C17H34O2 | Heptadecanoic acid/ n-Heptadecanoic Acid/ Margaric acid
hpde | heptadecenoate (n-C17:1) | C17H31O2 | -1 |  | C17H32O2
hpdeACP | heptadecenoyl ACP (C17:1ACP) | C17H31OX | 0 |  | C17H31OX
hpyr | Hydroxypyruvate | C3H3O4 | -1 | 1113-60-6 | C3H4O4 | Hydroxypyruvic acid/ 3-Hydroxypyruvate/ 3-Hydroxypyruvic acid | C00168
hxan | Hypoxanthine | C5H4N4O | 0 | 68-94-0 | C5H4N4O | 1,7-Dihydro-6H-purin-6-one/ Purine-6-ol/ 6-Hydroxypurine | C00262
iasp | Iminoaspartate | C4H3NO4 | -2 |  | C4H5NO4 |  | C05840
ibcoa | Isobutyryl-CoA | C25H38N7O17P3S | -4 |  | C25H42N7O17P3S | 2-Methylpropanoyl-CoA/ 2-Methylpropionyl-CoA | C00630
ichor | Isochorismate | C10H8O6 | -2 |  | C10H10O6 | Isochorismic acid | C00885
icit | Isocitrate | C6H5O7 | -3 | 30810-51-6 | C6H8O7 | Isocitric acid/ 1-Hydroxytricarballylic acid/ 1-Hydroxypropane-1,2,3-tricarboxylic acid | C00311
idp | IDP | C10H11N4O11P2 | -3 | 86-04-4 | [NAME] | 5'-inosinate diphosphate/ Inosine 5'-diphosphate/ Inosine diphosphate | C00104
[NAME] | L-Isoleucine | C6H13NO2 | 0 | 73-32-5 | C6H13NO2 | 2-Amino-3-methylvaleric acid/ [NAME] | C00407
[NAME] | L-Isoleucyl-tRNA(Ile) | C6H13NO2X | 1 |  | C6H12NO2X |  | C03127
imacp | 3-(Imidazol-4-yl)-2-oxopropyl phosphate | C6H8N2O5P | -1 |  | C6H9N2O5P | Imidazole-acetol phosphate | C01267
imp | IMP | C10H11N4O8P | -2 | 131-99-7 | C10H13N4O8P | Inosinic acid/ Inosine monophosphate/ Inosine 5'-monophosphate/ Inosine 5'-phosphate/ 5'-Inosinate/ 5'-Inosinic acid/ 5'-Inosine monophosphate | C00130
indole | Indole | C8H7N | 0 | 120-72-9 | C8H7N | 2,3-Benzopyrrole | C00463
inoshp | myo-Inositol hexakisphosphate | C6H6O24P6 | -12 |  | C6H18O24P6 | Phytic acid/ Phytate/ Inositol 1,2,3,4,5,6-hexakisphosphate/ myo-Inositol 1,2,3,4,5,6-hexakisphosphate/ 1D-myo-Inositol 1,2,3,4,5,6-hexakisphosphate/ D-myo-Inositol 1,2,3,4,5,6-hexakisphosphate | C01204
inospp1 | 1D-myo-inositol 1,3,4,5,6-pentakisphosphate | C6H7O21P5 | -10 | 20298-95-7 | C6H17O21P5 | myo-Inositol 1,2,4,5,6-pentakisphosphate/ D-myo-Inositol 1,2,4,5,6-pentakisphosphate/ Inositol 1,2,4,5,6-pentakisphosphate | C04563
inost | myo-Inositol | C6H12O6 | 0 | 87-89-8 |  | D-myo-Inositol/ 1D-myo-Inositol/ L-myo-Inositol/ 1L-myo-Inositol/ meso-Inositol/ Inositol/ Dambose/ Cyclohexitol/ Meat sugar/ Bios I | C00137
ins | Inosine | C10H12N4O5 | 0 | 58-63-9 |  | Hypoxanthine ribonucleoside | C00294
ipdp | Isopentenyl diphosphate | C5H9O7P2 | -3 |  | [NAME] | delta3-Isopentenyl diphosphate/ delta3-methyl-3-butenyl diphosphate/ Isopentenyl pyrophosphate | C00129
itp | ITP | C10H11N4O14P3 | -4 | 132-06-9 | C10H15N4O14P3 | Inosine 5'-triphosphate/ Inosine triphosphate/ Inosine tripolyphosphate | C00081
ivcoa | Isovaleryl-CoA | C26H40N7O17P3S | -4 |  | C26H44N7O17P3S | 3-Methylbutanoyl-CoA | C02939
k | K+ | K | 1 |  | K | Potassium/ K+ | C00238
kdo | 3-Deoxy-D-manno-2-octulosonate | C8H13O8 | -1 |  | [NAME] | 3-Deoxy-D-manno-octulosonate/ KDO/ 2-Dehydro-3-deoxy-D-octonate/ 3-Deoxyoctulosonic acid | C01187
kdo8nlipa | Kdo8N-lipid (A) | C102H187N3O31P2 | -4 |  | C102H191N3O31P2
kdo8nlipid4 | Kdo8N-lipid IV(A) | C76H139N3O29P2 | -4 |  | C76H143N3O29P2
[NAME] | Kdo8N-lipid IV(A) with laurate | C88H161N3O30P2 | -4 |  | C88H165N3O30P2
[NAME] | 3-Deoxy-D-manno-octulosonate 8-phosphate | C8H12O11P | -3 |  | C8H15O11P | 2-Dehydro-3-deoxy-D-octonate 8-phosphate | C04478
lac-D | D-Lactate | C3H5O3 | -1 | 10326-41-7 | C3H6O3 | (R)-Lactate/ D-Lactic acid/ D-2-Hydroxypropanoic acid/ D-2-Hydroxypropionic acid | C00256
lac-L | L-Lactate | C3H5O3 | -1 | 79-33-4 | C3H6O3 | Hydroxypropionic acid/ (S)-Lactate/ L-Lactic acid | C00186
[NAME] | L-Leucine | C6H13NO2 | 0 | 61-90-5 | C6H13NO2 | 2-amino-4-methylvaleric acid/ Leu | C00123
leutrna | L-Leucyl-tRNA(Leu) | C6H13NO2X | 1 |  | C6H12NO2X | L-Leucyl-tRNA | C02047
lgt-S | (R)-S-Lactoylglutathione | C13H20N3O8S | -1 | 59-85-8 | C13H21N3O8S |  | C03451
lipidA | 2,3-Bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6-beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate | C68H126N2O23P2 | -4 |  | C68H129N2O2OP2 | Lipid A disaccharide/ 2,3-Bis-(beta-hydroxymyristoyl)-D-glucosaminyl-(beta-D-1,6)-2,3-bis(beta-hydroxymyristoyl)-D-glucosaminyl beta-phosphate/ 2,3,2',3'-Tetrakis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6-beta-D-glucosamine 1-phosphate/ 2,3-Bis-(3-hydroxytetradecanoyl)-D-glucosaminyl-(beta-D-1,6)-2,3-bis(3-hydroxy-tetradecanoyl)-D-glucosaminyl beta-phosphate | C04932
lipidAds | Lipid A Disaccharide | C68H127N2O20P | -2 |  | C68H129N2O20P | 2,3,2',3'-Tetrakis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6-beta-D-glucosamine 1-phosphate/ 2,3-Bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6-beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate/ 2,3-Bis-(beta-hydroxymyristoyl)-D-glucosaminyl-(beta-D-1,6)-2,3-bis(beta-hydroxymyristoyl)-D-glucosaminyl beta-phosphate/ 2,3-Bis-(3-hydroxytetradecanoyl)-D-glucosaminyl-(beta-D-1,6)-2,3-bis(3-hydroxy-tetradecanoyl)-D-glucosaminyl beta-phosphate | C04932
lipidX | 2,3-Bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate | C34H64NO12P | -2 |  | C34H66NO12P | 2,3-Bis(beta-hydoroxymyristoyl)-beta-D-glucosaminyl 1-phosphate/ Lipid X | C04824
[NAME] | [NAME] (S. oneidensis MR-1) | C135H241N4O63P4 | -7 |  | C135H248N4O63P4
[NAME] | L-Lysine | C6H15N2O2 | 1 | 56-87-1 | C6H14N2O2 | Lys/ 2,6-diaminohexanoic acid/ Lysine acid | C00047
[NAME] | L-Lysine-tRNA (Lys) | C6H15N2O2X | 2 |  | C6H13N2O2X | L-Lysyl-tRNA | C01931
mal-L | L-Malate | C4H4O5 | -2 | 97-67-6 | C4H6O5 | (S)-Malate/ L-Apple acid/ L-Malic acid/ L-2-Hydroxybutanedioic acid/ Malate | C00149
malACP | Malonyl-[acyl-carrier protein] | C3H2O3X | -1 |  | C3H3O3X |  | C01209
malcoa | Malonyl-CoA | C24H33N7O19P3S | -5 | 524-14-1 | C24H38N7O19P3S | Malonyl coenzyme A | C00083
malt | Maltose | C12H22O11 | 0 | 69-79-4 |  | Malt sugar/ 1-alpha-D-Glucopyranosyl-4-alpha-D-glucopyranose | C00208
malthp | Maltoheptaose | C42H72O36 | 0 | 1980-14-9 | C42H72O36 | D-Glucopyranose, O-alpha-D-glucopyranosyl-(1-4)-O-alpha-D-glucopyranosyl-(1-4)-O-alpha-D-glucopyranosyl-(1-4)-O-alpha-D-glucopyranosyl-(1-4)-O-alpha-D-glucopyranosyl-(1-4)-O-alpha-D-glucopyranosyl-(1-4)-/ Maltoheptose
malthx | Maltohexaose | C36H62O31 | 0 | 34620-77-4 | C36H62O31 |  | C01936
maltpt | Maltopentaose | C30H52O26 | 0 | 34620-76-3 | C30H52O26 | D-Glucose, O-alpha-D-glucopyranosyl-(1->4)-O-alpha-D-glucopyranosyl-(1->4)-O-alpha-D-glucopyranosyl-(1->4)-O-alpha-D-glucopyranosyl-(1->4)-/ O-alpha-D-Glucopyranosyl-(1.4)-O-alpha-D-glucopyranosyl-(1.4)-O-alpha-D-glucopyranosyl-(1.4)-O-alpha-D-glucopyranosyl-(1.4)-D-glucose
malttr | Maltotriose | C18H32O16 | 0 | 1109-28-0 | C18H32O16 |  | C01835
maltttr | Maltotetraose | C24H42O21 | 0 | 34612-38-9 | C24H42O21 |  | C02052
malylcoa | Malyl-CoA | C25H35N7O20P3S | -5 | 43119-57-9 | C25H40N7O20P3S | (3S)-3-Carboxy-3-hydroxypropanoyl-CoA/ (3S)-3-Carboxy-3-hydroxypropionyl-CoA/ L-Malyl-CoA | C04348
man1p | D-Mannose 1-phosphate | C6H11O9P | -2 |  | C6H13O9P | alpha-D-Mannose 1-phosphate | C03812
man6p | D-Mannose 6-phosphate | C6H11O9P | -2 |  | C6H13O9P |  | C00275
mercppyr | Mercaptopyruvate | C3H3O3S | -1 |  | C3H4O3S | 3-Mercaptopyruvate | C00957
met-L | L-Methionine | C5H11NO2S | 0 | 63-68-3 | C5H11NO2S | L-2-Amino-4methylthiobutyric acid/ Met | C00073
[NAME] | 5,10-Methenyltetrahydrofolate | C20H20N7O6 | -1 |  | C20H22N7O6 | (6R)-5,10-methenyltetrahydrofolate/ 5,10-methenyltetrahydrofolate/ N5,N10-methenyl-5,6,7,8-tetrahydrofolate/ N5,N10-methenyl-tetrahydrofolate | C00445
mettrna | L-Methionyl-tRNA (Met) | C5H11NO2SX | 1 |  | C5H10NO2SX | L-Methionyl-tRNA | C02430
mg2 | [NAME] | [NAME] | 2 |  | [NAME] | Magnesium/ Mg2+ | C00305
mi1p-D | 1D-myo-Inositol 1-phosphate | C6H11O9P | -2 |  |  |  | C01177
micit | Methylisocitrate | C7H7O7 | -3 |  | C7H10O7 | (2S,3R)-3-Hydroxybutane-1,2,3-tricarboxylate/ Methylisocitric acid | C04593
mlthf | 5,10-Methylenetetrahydrofolate | C20H21N7O6 | -2 |  | C20H23N7O6 | N5,N10-methylene-tetrahydrofolate/ N5,N10-methylene-5,6,7,8-tetrahydrofolate/ 5,10-methylene-5,6,7,8-tetrahydrofolate | C00143
mmalsa | (S)-Methylmalonate semialdehyde | C4H5O3 | -1 | 598-35-6 | C4H6O3 | (S)-Methylmalonate semialdehyde | C06002
[NAME] | methymenaquinol 7 | [NAME] | 0 |  | [NAME]
mmqn7 | methylmenaquinone 7 | C47H66O2 | 0 | 97858-30-5 | C47H66O2
mn2 | Mn2+ | Mn | 2 |  | Mn | Manganese dication/ [NAME] Mn(II) | C00034
mn4o | Manganese(IV) oxide | MnO2 | 0 | 1313-13-9 | MnO2
mobd | Molybdate | MoO4 | -2 | 14259-85-9 | H2MoO4 |  | [NAME]
mql7 | Menaquinol 7 | C46H66O2 | 0 |  | C46H66O2
mqn7 | Menaquinone 7 | C46H64O2 | 0 | 2124-57-4 | C46H64O2 | [NAME] (35)
[NAME] | Methylglyoxal | C3H4O2 | 0 | 78-98-8 | C3H4O2 | [NAME] aldehyde/ 2-Ketopropionaldehyde/ 2-Oxopropanal | C00546
myrsACP | Myristoyl-ACP (n-C14:0ACP) | C14H27OX | 0 |  | C14H27OX
na1 | Sodium | Na | 1 | 7440-23-5 | Na | Na/ Natrium | C01330
nac | Nicotinate | C6H4NO2 | -1 | 59-67-6 | C6H5NO2 | [NAME] acid/ 3-Pyridinecarboxylic acid | C00253
nad | Nicotinamide adenine dinucleotide | C21H26N7O14P2 | -1 | 53-84-9 | C21H28N7O14P2 | NAD+/ NAD/ beta-Diphosphopyridine Nucleotide/ beta-NAD/ beta-Nicotinamide adenine dinucleotide | C00003
nadh | Nicotinamide adenine dinucleotide - reduced | C21H27N7O14P2 | -2 | 53-84-9 | C21H29N7O14P2 | DPNH/ NADH | C00004
nadp | Nicotinamide adenine dinucleotide phosphate | C21H25N7O17P3 | -3 | 53-59-8 | C21H29N7O17P3 | NADP/ beta-Nicotinamide adenine dinucleotide phosphate/ NADP+ | C00006
nadph | Nicotinamide adenine dinucleotide phosphate - reduced | [NAME] | -4 | 2646-71-1 | C21H30N7O17P3 | TPNH/ beta-triphosphopyridine nucleotide/ NADPH | C00005
nh4 | Ammonium | H4N | 1 |  | H3N |  | C01342
ni2 | Ni2+ | Ni | 2 |  | Ni | Nickel | C00291
nicrnt | Nicotinate D-ribonucleotide | C11H12NO9P | -2 |  | C11H15NO9P | Nicotinate ribonucleotide/ Nicotinic acid ribonucleotide/ beta-Nicotinate D-ribonucleotide | C01185
[NAME] | NMN | C11H14N2O8P | -1 | 1094-61-7 |  | Nicotinamide D-ribonucleotide/ Nicotinamide mononucleotide/ Nicotinamide ribonucleotide | C00455
[NAME] | Nitrite | NO2 | -1 | 7697-37-2 | HNO2 | Nitric acid | C00088
no3 | Nitrate | NO3 | -1 |  | HNO3 | Nitric acid | C00244
o2 | O2 | O2 | 0 | 7782-44-7 | O2 | Oxygen/ dioxygen | C00007
o2- | Superoxide | O2 | -1 |  | O2 | O2.-/ O2 free radical/ anion | C00704
oaa | Oxaloacetate | C4H2O5 | -2 | 328-42-7 | C4H4O5 | Oxalacetic acid/ Oxaloacetic acid/ 2-oxobutanedioic acid/ Oxosuccinic acid | C00036
ocdACP | Octadecanoyl-ACP (n-C18:0ACP) | C18H35OX | 0 |  | C18H35OX | Octadecanoyl-[acyl-carrier protein]
ocdca | octadecanoate (n-C18:0) | [NAME] | -1 | 57-11-4 | C18H36O2 | [NAME] acid/ Octadecanoic acid/ Stearate/ n-C18:0 | C01530
ocdcea | octadecenoate (n-C18:1) | C18H33O2 | -1 |  | C18H34O2 | n-C18:1/ Fatty acid (n-C18:1)
octdp | all-trans-Octaprenyl diphosphate | C40H65O7P2 | -3 |  | C40H68O7P2 | Farnesylfarnesylgeraniol | C04146
octeACP | Octadecenoyl-ACP (n-C18:1ACP) | C18H33OX | 0 |  | C18H33OX
ohpb | 2-Oxo-3-hydroxy-4-phosphobutanoate | C4H4O8P | -3 |  |  |  | C06054
orn-L | L-Ornithine | C5H13N2O2 | 1 | 70-26-8 | C5H12N2O2 | 2,5-Diaminovaleric acid/ 2,5-Diaminopentanoic acid/ 2,5-Diaminopentanoate | C00077
orot | Orotate | C5H3N2O4 | -1 | 65-86-1 | C5H4N2O4 | Orotic acid/ Uracil-6-carboxylic acid | C00295
orot5p | Orotidine 5'-phosphate | C10H10N2O11P | -3 | 2149-82-8 | [NAME] | Orotidylic acid | C01103
palmACP | Palmitoyl-ACP (n-C16:0ACP) | C16H31OX | 0 |  | C16H31OX
pan4p | Pantetheine 4'-phosphate | C11H21N2O7PS | -2 |  | C11H23N2O7PS | Phosphopantetheine/ 4'-Phosphopantetheine | C01134
pant-R | (R)-Pantoate | C6H11O4 | -1 | 470-29-1 | C6H12O4 | Pantoate/ Pantoic acid/ D-pantoate | C00522
pap | Adenosine 3',5'-bisphosphate | C10H11N5O10P2 | -4 | 1053-73-2 | C10H15N5O10P2 | PAP/ 3'-Phosphoadenylate/ Phosphoadenosine phosphate | C00054
paps | 3'-Phosphoadenylyl sulfate | C10H11N5O13P2S | -4 | 482-67-7 | C10H15N5O13P2S | 3'-Phosphoadenosine 5'-phosphosulfate/ 3'-Phospho-5'-adenylyl sulfate/ PAPS | C00053
pdACP | pentadecanoyl-ACP (n-C15:0ACP) | C15H29OX | 0 |  | C15H29OX
pde | pentadecenoate (n-C15:1) | C15H27O2 | -1 |  | C15H28O2
pdeACP | pentadecenoyl-ACP (C15:1ACP) | C15H27OX | 0 |  | C15H27OX
pdx5p | Pyridoxine 5'-phosphate | C8H10NO6P | -2 | 447-05-2 | C8H12NO6P | Pyridoxine phosphate/ Pyridoxine 5-phosphate | C00627
pe | Phosphatidylethanolamine | C7H12NO8PR2 | 0 | 39382-08-6 | C7H12NO8PR2 | Cephalin/ (3-Phosphatidyl)ethanolamine/ (3-Phosphatidyl)-ethanolamine | C00350
pendp | all-trans-Pentaprenyl diphosphate | [NAME] | -3 |  | C25H44O7P2 | poly-cis-Polyprenyl diphosphate longer by one C5 unit | C04217
pep | Phosphoenolpyruvate | C3H2O6P | -3 | 138-08-9 | C3H5O6P | [NAME] acid/ PEP | C00074
[NAME] | Peptidoglycan subunit of Escherichia coli | C40H62N8O21 | -2 |  | C40H64N8O21
peptx | Peptidoglycan subunit crosslinked | C37H55N7O19 | -2
pgly | Phosphatidylglycerol | C8H12O10PR2 | -1 |  | C8H13O10PR2 | 3-(3-sn-phosphatidyl)glycerol/ 3(3-Phosphatidyl-)glycerol | C00344
pglyp | Phosphatidylglycerophosphate | C8H11O13P2R2 | -3 | 94-62-2 | C8H14O13P2R2 | 3(3-sn-Phosphatidyl)-sn-glycerol 1-phosphate/ 3(3-Phosphatidyl-)L-glycerol 1-phosphate | C03892
phe-L | L-Phenylalanine | C9H11NO2 | 0 | 63-91-2 | C9H11NO2 | 3-phenylalanine/ (S)-alpha-amino-beta-phenylpropionic acid/ (S)-Phenylalanine | [NAME]
pheme | Protoheme | C34H31FeN4O4 | -1 | 14875-96-8 | C34H32FeN4O4 | Heme/ Haem/ Heme B | C00032
[NAME] | L-Phenylalanyl-tRNA(Phe) | C9H11NO2X | 1 |  | C9H10NO2X |  | C03511
phom | O-Phospho-L-homoserine | C4H8NO6P | -2 |  | C4H10NO6P |  | C01102
phpyr | Phenylpyruvate | C9H7O3 | -1 | 156-06-9 | C9H8O3 | Phenylpyruvic acid/ alpha-Ketohydrocinnamic acid/ keto-Phenylpyruvate/ 3-Phenyl-2-oxopropanoate | C00166
phthr | O-Phospho-4-hydroxy-L-threonine | [NAME] | -2 | 598-35-6 | C4H10NO7P | O-Phospho-4-hydroxy-L-threonine | C06055
pi | Phosphate | HO4P | -2 | 14265-44-2 | H3O4P | Orthophosphate/ Pi/ Phosphoric acid | C00009
pmcoa | Pimeloyl-CoA | C28H41N7O19P3S | -5 |  | C28H46N7O19P3S | 6-Carboxyhexanoyl-CoA | C01063
pnto-R | (R)-Pantothenate | [NAME] | -1 | 79-83-4 | C9H17NO5 | D-Pantothenate/ Pantothenate/ Pantothenic acid | C00864
ppa | Propionate | C3H5O2 | -1 | 79-09-4 | C3H6O2 | Propanoate/ Propanoic acid/ Propionic acid | C00163
ppbng | Porphobilinogen | C10H13N2O4 | -1 | 487-90-1 | C10H14N2O4 |  | C00931
ppcoa | Propanoyl-CoA | C24H36N7O17P3S | -4 | 317-66-8 | C24H40N7O17P3S | Propionyl coenzyme A/ Propionyl-CoA | C00100
pphn | Prephenate | C10H8O6 | -2 | 126-49-8 | C10H10O6 | Prephenic acid | C00254
ppi | Diphosphate | HO7P2 | -3 | 2466-09-03 00:00:00 | H4O7P2 | Pyrophosphate/ Pyrophosphoric acid/ PPi | C00013
ppp9 | Protoporphyrin | C34H32N4O4 | -2 | 553-12-8 | C34H34N4O4 | Protoporphyrin IX/ Porphyrinogen IX | C02191
pppg9 | Protoporphyrinogen IX | C34H38N4O4 | -2 |  | C34H40N4O4 |  | C01079
pppi | Inorganic triphosphate | HO10P3 | -4 |  | H5O10P3 | triphosphate | C03279
pram | 5-Phospho-beta-D-ribosylamine | C5H11NO7P | -1 |  | C5H12NO7P | 5-Phospho-D-ribosylamine/ 5-Phosphoribosyl-1-amine/ 5-Phosphoribosylamine | C03090
pran | N-(5-Phospho-D-ribosyl)anthranilate | C12H13NO9P | -3 |  | C12H16NO9P | N-(5-Phospho-beta-D-ribosyl)anthranilate/ N-(5-Phosphoribosyl)anthranilic acid | C04302
prbamp | 1-(5-Phosphoribosyl)-AMP | C15H19N5O14P2 | -4 |  | C15H23N5O14P2 | Phosphoribosyl)-AMP | C02741
prbatp | 1-(5-Phosphoribosyl)-ATP | C15H19N5O20P4 | -6 |  | C15H25N5O20P4 | Phosphoribosyl-ATP/ N1-(5-Phospho-D-ribosyl)-ATP | C02739
prfp | 1-(5-Phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide | C15H22N5O15P2 | -3 |  | C15H25N5O15P2 | N-(5'-Phospho-D-ribosylformimino)-5-amino-1-(5''-phospho-D-ribosyl)-4-imidazolecarboxamide/ 5-(5-Phospho-D-ribosylaminoformimino)-1-(5-phosphoribosyl)-imidazole-4-carboxamide/ 5-[(5-Phospho-1-deoxyribulos-1-ylamino)methylideneamino]-1-(5-phosphoribosyl)imidazole-4-carboxamide/ N-(5'-Phosphoribosylformimino)-5-amino-1-(5''-phosphoribosyl)-4-imidazolecarboxamide/ Phosphoribosyl-formimino-AICAR-phosphate | C04896
[NAME] | 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]-1-(5-phosphoribosyl)imidazole-4-carboxamide | C15H22N5O15P2 | -3 |  | C15H25N5O15P2 | Phosphoribulosyl-formimino-AICAR-phosphate/ N-(5'-Phosphoribulosylformimino)-5-amino-1-(5''-phosphoribosyl)-4-imidazolecarboxamide/ N-(5'-Phospho-D-1'-ribulosylformimino)-5-amino-1-(5''-phospho-D-ribosyl)-4-imidazolecarboxamide | C04916
[NAME] | L-Proline | C5H9NO2 | 0 | 147-85-3 | C5H9NO2 | 2-Pyrrolidinecarboxylic acid/ Pro | C00148
protein_Son_aerobic | protein for shewanella MR-1 (aerobic growth) | C47395H74290N13364O15024S364 | -318
protrna | L-Prolyl-tRNA(Pro) | C5H9NO2X | 1 |  | C5H8NO2X |  | C02702
prpp | 5-Phospho-alpha-D-ribose 1-diphosphate | C5H8O14P3 | -5 |  | C5H13O14P3 | 5-Phosphoribosyl diphosphate/ PRPP/ 5-Phosphoribosyl 1-pyrophosphate | C00119
ps | Phosphatidylserine | C8H11NO10PR2 | -1 |  | C8H12NO10PR2 | [NAME] 1,2-Diacyl-sn-glycerol 3-phospho-L-serine/ 3-O-sn-Phosphatidyl-L-serine/ O3-Phosphatidyl-L-serine | [NAME]
psd5p | Pseudouridine 5'-phosphate | C9H11N2O9P | -2 | 1157-60-4 | C9H13N2O9P |  | C01168
pser-L | O-Phospho-L-serine | C3H6NO6P | -2 | 407-41-0 | C3H8NO6P |  | C01005
ptdca | pentadecanoate (n-C15:0) | C15H29O2 | -1 | 1002-84-2 | C15H30O2 | Pentadecanoic (Palmitic) acid/ [NAME] acid/ n-Pentadecanoic Acid
ptrc | Putrescine | C4H14N2 | 2 | 110-60-1 | C4H12N2 | Tetramethylenediamine/ 1,4-Diaminobutane/ 1,4-Butanediamine | C00134
pyam5p | Pyridoxamine 5'-phosphate | C8H11N2O5P | -2 | 529-96-4 | C8H13N2O5P | Pyridoxamine phosphate/ Pyridoxamine 5-phosphate | C00647
pydx5p | Pyridoxal 5'-phosphate | C8H7NO6P | -3 | 54-47-7 | C8H10NO6P | Pyridoxal phosphate/ Pyridoxal 5-phosphate | C00018
pyr | Pyruvate | C3H3O3 | -1 | 127-17-3 | C3H4O3 | [NAME] acid/ 2-Oxopropanoate/ 2-Oxopropanoic acid/ Pyroracemic acid/ alpha-Ketopropionic acid/ 2-Ketopropionic Acid | C00022
quln | Quinolinate | C7H3NO4 | -2 | 89-00-9 | C7H5NO4 | Quinolinic acid/ 2,3-Pyridinedicarboxylic acid/ Pyridine-2,3-dicarboxylate | C03722
r1p | alpha-D-Ribose 1-phosphate | C5H9O8P | -2 | 58459-37-3 | C5H11O8P | Ribose 1-phosphate/ D-Ribose 1-phosphate | C00442
r5p | alpha-D-Ribose 5-phosphate | C5H9O8P | -2 | 4300-28-1 | C5H11O8P | D-Ribose 5-phosphate/ Ribose 5-phosphate | C00117
rb15bp | D-Ribulose 1,5-bisphosphate | C5H8O11P2 | -4 | 24218-00-6 | C5H12O11P2 |  | C01182
rdmbzi | N1-(alpha-D-ribosyl)-5,6-dimethylbenzimidazole | C14H18N2O4 | 0 |  | C14H18N2O4 | [NAME] | C05775
rhcys | S-Ribosyl-L-homocysteine | C9H17NO6S | 0 | 37558-16-0 | C9H17NO6S | S-Ribosyl-L-homocysteine/ S-D-Ribosyl-L-homocysteine | C03539
rib-D | D-Ribose | C5H10O5 | 0 | 50-69-1 | C5H10O5 |  | C00121
ribflv | [NAME] | C17H20N4O6 | 0 | 83-88-5 | C17H20N4O6 | 7,8-Dimethyl-10-ribitylisoalloxazine/ Lactoflavin/ Vitamin B2 | C00255
rna_Son | RNA, Shewanella oneidensis MR-1 | C950H1073N373O700P100 | -100 |  | C977H1173N373O700P100
ru5p-D | D-Ribulose 5-phosphate | C5H9O8P | -2 | 4151-19-3 | C5H11O8P |  | C00199
s7p | Sedoheptulose 7-phosphate | C7H13O10P | -2 |  | C7H15O10P | altro-Heptulose 7-phosphate | C00281
sbzcoa | O-Succinylbenzoyl-CoA | C32H39N7O20P3S | -5 |  | C32H44N7O20P3S | 2-Succinylbenzoyl-CoA/ Succinylbenzoyl-CoA | C03160
seln | Selenide | HSe | -1 | 531-44-2 | H2Se | Hydrogen selenide | C01528
selnp | Selenophosphate | H2O3PSe | -1 | 16561-29-8 | H3O3PSe |  | [NAME]
ser-L | L-Serine | C3H7NO3 | 0 | 56-45-1 | C3H7NO3 | L-2-Amino-3-hydroxypropionic acid/ L-3-Hydroxy-alanine/ Ser | C00065
sertrna | L-Seryl-tRNA(Ser) | C3H7NO3X | 1 |  | C3H6NO3X |  | C02553
shcl | dihydrosirohydrochlorin | C42H40N4O16 | -8 | 65207-12-7 | C42H48N4O16 |  | C02463
sheme | Siroheme | C42H36FeN4O16 | -8 |  | C42H46FeN4O16 |  | C00748
skm | Shikimate | C7H9O5 | -1 | 138-59-0 | C7H10O5 | Shikimic acid/ 3,4,5-Trihydroxy-1-cyclohexenecarboxylic acid | C00493
skm5p | Shikimate 5-phosphate | C7H8O8P | -3 |  | C7H11O8P | Shikimate 3-phosphate | C03175
sl26da | N-Succinyl-LL-2,6-diaminoheptanedioate | C11H16N2O7 | -2 |  | C11H18N2O7 | N-Succinyl-LL-2,6-diaminopimelate/ N-Succinyl-L-2,6-diaminoheptanedioate/ N-Succinyl-L-2,6-diaminopimelate | C04421
sl2a6o | N-Succinyl-2-L-amino-6-oxoheptanedioate | C11H12NO8 | -3 |  | C11H15NO8 | N-Succinyl-L-2-amino-6-oxoheptanedioate/ N-Succinyl-L-2-amino-6-oxopimelate/ N-Succinyl-2-amino-6-oxo-L-pimelic acid/ N-Succinyl-epsilon-keto-L-aminopimelic acid | [NAME]
slcys | S-Sulfo-L-cysteine | C3H6NO5S2 | -1 | 63-37-6 | C3H7NO5S2 |  | C05824
so3 | Sulfite | O3S | -2 | 7782-99-2 | H2O3S | Sulfurous acid | C00094
so4 | Sulfate | O4S | -2 | 7664-93-9 | H2O4S | Sulfuric acid | C00059
spmd | Spermidine | C7H22N3 | 3 | 124-20-9 | C7H19N3 | N-(3-Aminopropyl)-1,4-butane-diamine | C00315
[NAME] | Spermine | C10H30N4 | 4 | 71-44-3 |  | N,N'-Bis(3-aminopropyl)-1,4-butanediamine | C00750
srch | sirohydrochlorin | C42H38N4O16 | -8 |  | C42H46N4O16 |  | C05778
ssaltpp | Succinate semialdehyde-thiamin diphosphate anion | C16H22N4O10P2S | -2 |  | C16H24N4O10P2S |  | C05816
sucarg | N2-Succinyl-L-arginine | C10H17N4O5 | -1 | 1758-80-1 | C10H18N4O5 |  | C03296
sucbz | o-Succinylbenzoate | C11H8O5 | -2 |  | C11H10O5 | 2-Succinylbenzoate/ Succinylbenzoate | C02730
succ | Succinate | C4H4O4 | -2 | 110-15-6 | C4H6O4 | Succinic acid/ Butanedionic acid/ Ethylenesuccinic acid | C00042
succoa | Succinyl-CoA | C25H35N7O19P3S | -5 | 604-98-8 | C25H40N7O19P3S | Succinyl coenzyme A/ succino-1-yl-coenzymeA | C00091
[NAME] | N2-Succinyl-L-glutamate | C9H10NO7 | -3 | 2009-64-5 | C9H13NO7 |  | C05931
sucgsa | N2-Succinyl-L-glutamate 5-semialdehyde | C9H11NO6 | -2 | 2009-64-5 | C9H13NO6 |  | C05932
suchms | O-Succinyl-L-homoserine | C8H12NO6 | -1 | 1492-23-5 | C8H13NO6 |  | C01118
sucorn | N2-Succinyl-L-ornithine | C9H15N2O5 | -1 | 80102-04-1 | C9H16N2O5 |  | C03415
sucsal | Succinic semialdehyde | C4H5O3 | -1 | 692-29-5 | C4H6O3 | Succinate semialdehyde/ 4-Oxobutanoate | C00232
tcynt | Thiocyanate | CNS | -1 | 463-56-9 | CHNS | Thiocyanic acid | C01755
thbpt | Tetrahydrobiopterin | C9H15N5O3 | 0 | 17528-72-2 | C9H15N5O3 | 2-Amino-6-(1,2-dihydroxypropyl)-5,6,7,8-tetrahydoro-4(1H)-pteridinone/ 5,6,7,8-Tetrahydrobiopterin/ Tetrahydrobiopterin | [NAME]
thdp | 2,3,4,5-Tetrahydrodipicolinate | C7H7NO4 | -2 | 52-52-8 | C7H9NO4 | delta1-Piperidine-2,6-dicarboxylate/ (R)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate | [NAME]
thf | 5,6,7,8-Tetrahydrofolate | C19H21N7O6 | -2 | 135-16-0 | C19H23N7O6 | Tetrahydrofolic acid/ THF/ Tetrahydrofolate/ (6S)-Tetrahydrofolic acid/ (6S)-THFA/ (6S)-Tetrahydrofolate | C00101
thm | Thiamin | C12H17N4OS | 1 | 67-03-8 |  | Thiamine/ Vitamin B1/ Aneurin/ [NAME] factor | C00378
thmmp | Thiamin monophosphate | C12H16N4O4PS | -1 | 532-40-1 | C12H18N4O4PS | Thiamine monophosphate/ Thiamin phosphate/ Thiamine phosphate/ TMP | C01081
thmpp | Thiamine diphosphate | C12H16N4O7P2S | -2 | 154-87-0 | C12H19N4O7P2S | [NAME] | C00068
[NAME] | L-Threonine | C4H9NO3 | 0 | 72-19-5 | C4H9NO3 | [NAME] acid | C00188
[NAME] | L-Allo-threonine | C4H9NO3 | 0 | 28954-12-3 | C4H9NO3 | L-Allothreonine | C05519
thrtrna | L-Threonyl-tRNA(Thr) | [NAME] | 1 |  | C4H8NO3X |  | C02992
thym | Thymine | C5H6N2O2 | 0 | 65-71-4 |  | T/ 2,4-Dihydroxy-5-methylpyrimidine/ Thy | C00178
thymd | Thymidine | C10H14N2O5 | 0 | 50-89-5 | C10H14N2O5 | dT/ 2'-Deoxythymidine/ Deoxythymidine | C00214
tma | Trimethylamine | C3H10N | 1 | 75-50-3 | C3H9N |  | C00565
tmao | Trimethylamine N-oxide | C3H9NO | 0 | 1184-78-7 | C3H9NO |  | C01104
trdox | Oxidized thioredoxin | X | 0 |  | X |  | C00343
trdrd | Reduced thioredoxin | XH2 | 0 |  | XH2 |  | C00342
[NAME] | tRNA(Ala) | HOX | 0 |  | HOX |  | C01635
trnaarg | tRNA(Arg) | HOX | 0 |  | HOX |  | C01636
trnaasn | tRNA(Asn) | HOX | 0 |  | HOX |  | C01637
trnaasp | tRNA(Asp) | HOX | 0 |  | HOX |  | C01638
trnacys | tRNA(Cys) | HOX | 0 |  | HOX |  | C01639
trnagln | tRNA(Gln) | HOX | 0 |  | HOX |  | C01640
trnaglu | tRNA ([NAME]) | HOX | 0 |  | HOX |  | C01641
trnagly | tRNA(Gly) | HOX | 0 |  | HOX |  | C01642
trnahis | tRNA(His) | HOX | 0 |  | HOX |  | C01643
trnaile | tRNA(Ile) | HOX | 0 |  | HOX |  | C01644
trnaleu | tRNA(Leu) | HOX | 0 |  | HOX |  | C01645
[NAME] | tRNA(Lys) | HOX | 0 |  | HOX |  | C01646
trnamet | tRNA(Met) | HOX | 0 |  | HOX |  | C01647
trnaphe | tRNA(Phe) | HOX | 0 |  | HOX |  | C01648
trnapro | tRNA(Pro) | HOX | 0 |  | HOX |  | C01649
trnaser | tRNA(Ser) | HOX | 0 |  | HOX |  | C01650
trnathr | tRNA(Thr) | HOX | 0 |  | HOX |  | C01651
trnatrp | tRNA(Trp) | HOX | 0 |  | HOX |  | C01652
trnatyr | tRNA(Tyr) | HOX | 0 |  | HOX |  | C00787
trnaval | tRNA(Val) | HOX | 0 |  | HOX |  | C01653
[NAME] | L-Tryptophan | C11H12N2O2 | 0 | 73-22-3 | C11H12N2O2 | (S)-alpha-amino-beta-(3-indolyl)-propionic acid | C00078
[NAME] | L-Tryptophanyl-tRNA(Trp) | C11H12N2O2X | 1 |  | C11H11N2O2X |  | C03512
tsul | Thiosulfate | O3S2 | -2 |  | H2O3S2 | Hyposulfite | C00320
ttdca | tetradecanoate (C14:0) | C14H27O2 | -1 | 544-63-8 | C14H28O2 | emery 655;/ hystrene 9014/ 1-tridecanecarboxylic acid;/ Myristic Acid;/ crodacid;/ n-tetradecoic acid;/ Tetradecanoic acid;/ neo-fat 14;/ hydrofol acid 1495;/ n-Tetradecanoic Acid;/ univol u 3165;
tttnt | tetrathionate | O6S4 | -2 | 13760-29-7 | H2O6S4 |  | C02084
[NAME] | L-Tyrosine | C9H11NO3 | 0 | 60-18-4 | C9H11NO3 | (S)-3-(p-Hydroxyphenyl)alanine/ (S)-2-Amino-3-(p-hydroxyphenyl)propionic acid | C00082
tyrtrna | L-Tyrosyl-tRNA(Tyr) | C9H11NO3X | 1 |  | C9H10NO3X |  | C02839
u23ga | UDP-2,3-bis(3-hydroxytetradecanoyl)glucosamine | C43H75N3O20P2 | -2 |  | C43H77N3O20P2 | UDP-2,3-bis(beta-hydroxymyristoyl)-D-glucosamine/ UDP-2,3-bis(3-hydroxytetradecanoyl)-D-glucosamine | C04652
u3aga | UDP-3-O-(3-hydroxytetradecanoyl)-N-acetylglucosamine | C31H51N3O19P2 | -2 |  | C31H53N3O19P2 | UDP-3-O-(beta-hydroxymyristoyl)-N-acetylglucosamine | C04738
u3hga | UDP-3-O-(3-hydroxytetradecanoyl)-D-glucosamine | C29H50N3O18P2 | -1 |  | C29H51N3O18P2 | UDP-3-O-(beta-hydroxymyristoyl)-D-glucosamine | C06022
uaagmda | Undecaprenyl-diphospho-N-acetylmuramoyl-(N-acetylglucosamine)-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine | C95H152N8O28P2 | -4 |  | C95H156N8O28P2 |  | C05898
uaccg | UDP-N-acetyl-3-O-(1-carboxyvinyl)-D-glucosamine | C20H26N3O19P2 | -3 |  | C20H29N3O19P2 | UDP-N-acetyl-3-(1-carboxyvinyl)-D-glucosamine/ UDP-N-acetylglucosamine-3-O-pyruvateether | C04631
uacgala | UDP-N-acetyl-D-galactosamine | C17H25N3O17P2 | -2 |  | C17H27N3O17P2 |  | [NAME]
uacgam | UDP-N-acetyl-D-glucosamine | C17H25N3O17P2 | -2 |  | C17H27N3O17P2 | UDP-N-acetylglucosamine | C00043
uagmda | Undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine | C87H139N7O23P2 | -4 |  | C87H143N7O23P2 |  | C05897
uagnr | UDP-N-acetyl-D-galactosaminuronic acid | C17H22N3O18P2 | -3 |  | C17H25N3O18P2 |  | C13952
uama | UDP-N-acetylmuramoyl-L-alanine | [NAME] | -3 |  | C23H36N4O20P2 |  | C01212
uamag | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate | C28H39N5O23P2 | -4 |  | C28H43N5O23P2 |  | C00692
uamr | UDP-N-acetylmuramate | [NAME] | -3 |  | C20H31N3O19P2 |  | C01050
ubq8 | Ubiquinone-8 | C49H74O4 | 0 | 1339-63-5 | C49H74O4 |  | C00399
ubq8h2 | Ubiquinol-8 | C49H76O4 | 0 |  | C49H76O4 | ubiquinol(8)
udcpdp | Undecaprenyl diphosphate | C55H89O7P2 | -3 |  | C55H92O7P2 | all-trans-Undecaprenyl diphosphate | C03543
udcpp | Undecaprenyl phosphate | C55H89O4P | -2 |  | C55H91O4P |  | C00348
udp | UDP | C9H11N2O12P2 | -3 | 58-98-0 | C9H14N2O12P2 | Uridine 5'-diphosphate/ uridine diphosphate/ 5'-uridylate diphosphate | C00015
udpg | UDPglucose | [NAME] | -2 |  | C15H24N2O17P2 | UDP-D-glucose | C00029
udpgal | UDPgalactose | [NAME] | -2 |  | C15H24N2O17P2 | UDP-D-galactose/ UDP-D-galactopyranose | C00052
udpgalur | UDPgalacturonate | C15H19N2O18P2 | -3 |  | C15H22N2O18P2 |  | C00617
udpglcur | UDP-D-glucuronate | C15H19N2O18P2 | -3 |  | C15H22N2O18P2 | UDPglucuronate | C00167
ugmd | UDP-N-acetylmuramoyl-L-alanyl-D-gamma-glutamyl-meso-2,6-diaminopimelate | [NAME] | -4 |  | [NAME] | UDP-N-acetylmuramoyl-L-alanyl-D-gamma-glutamyl-meso-2,6-/ UDP-N-acetylmuramoyl-L-alanyl-D-gamma-glutamyl-meso-2,6-diaminoheptanedioate | C04877
ugmda | UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine | C41H61N9O28P2 | -4 |  | C41H65N9O28P2 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanyl-D-alanine | C04882
ump | UMP | C9H11N2O9P | -2 | 58-97-9 | C9H13N2O9P | Uridylic acid/ Uridine monophosphate/ Uridine 5'-monophosphate/ 5'Uridylic acid | C00105
unknown1 | Unknown Product | C8H10N2O6 | 0
uppg3 | Uroporphyrinogen III | C40H36N4O16 | -8 | 1976-85-8 | C40H44N4O16 |  | C01051
ura | Uracil | C4H4N2O2 | 0 | 66-22-8 | C4H4N2O2 | 2,4-dioxy pyrimidine/ 2,4-Dihydroxypyrimidine/ U/ 2,4(1H,3H)-Pyrimidinedione | C00106
urcan | Urocanate | C6H5N2O2 | -1 | 104-98-3 | C6H6N2O2 | Urocanic acid/ 4-Imidazoleacrylic acid/ 2-Propenoic acid | C00785
urdio | Uranium dioxide | UO2 | 0 | 1344-57-6 | UO2
[NAME] | Uridine | C9H12N2O6 | 0 | 58-96-8 |  |  | C00299
urnyl | Uranyl | UO2 | 2 |  | UO2
utp | UTP | C9H11N2O15P3 | -4 | 63-39-8 | C9H15N2O15P3 | Uridine 5'-triphosphate/ Uridine triphosphate/ rUTP/ 5'-uridylate triphosphate | C00075
val-L | L-Valine | C5H11NO2 | 0 | 72-18-4 | C5H11NO2 | 2-Aminoisovaleric acid/ Val/ 2-Amino-3-methylbutyric acid | C00183
valtrna | L-Valyl-tRNA(Val) | C5H11NO2X | 1 |  | C5H10NO2X |  | C02554
wo4 | tungstate | WO4 | -2 |  | H2WO4
xan | Xanthine | C5H4N4O2 | 0 | 69-89-6 |  | 2,6-Dioxopurine | C00385
xmp | Xanthosine 5'-phosphate | C10H11N4O9P | -2 | 523-98-8 | C10H13N4O9P | Xanthylic acid/ (9-D-Ribosylxanthine)-5'-phosphate/ XMP | C00655
xtsn | [NAME] | C10H12N4O6 | 0 | 146-80-5 |  |  | C01762
xu5p-D | D-Xylulose 5-phosphate | C5H9O8P | -2 |  | C5H11O8P |  | C00231
Notes:
protein_Son_aerobic (represents 10,002 amino acids and 9,972 peptide bonds)
rna_son (represents 100 nucleotides)
dna_son (represents 100 nucleotides)