Spreadsheet: 1eedb31e-8c5d-46e2-abb2-bdfb49b39dea
Sheet: Assem-50%

HV5 Pool Assemblies - Velvet
Kmers: 25-79, step 6          Kmer chosen by largest n50          [NAME] size: 269
Pool Data (Size = sum of BAC sizes) |  |  |  |  | Assembler Data
HV5 pool | Size | Reads | Bases | Covg | K | Cnt | Used | Med | Mean | n50 | n50/Sz | [NAME] | Sum | Sum/Sz | Ns
1 | 21583178 | 8588298 | 769517688 | 25.7 | 55 | 14489 | 79 | 300 | 1194 | 4651 | 0.022 | 43212 | 17311755 | 80.209 | 522603
2 | 22095658 | 5838315 | 512842627 | 25.7 | 37 | 15513 | 66 | 224 | 863 | 3726 | 0.017 | 42157 | 13396054 | 60.628 | 356007
3 | 22161490 | 5162088 | 461433789 | 25.7 | 37 | 15054 | 69 | 236 | 963 | 4361 | 0.02 | 38457 | 14508070 | 65.465 | 367316
4 | 21874686 | 4775432 | 427167170 | 25.7 | 31 | 13290 | 58 | 220 | 914 | 3776 | 0.017 | 56789 | 12150639 | 55.547 | 302222
5 | 21786521 | 3720423 | 333637238 | 25.7 | 37 | 14675 | 66 | 239 | 872 | 3384 | 0.016 | 35381 | 12805233 | 58.776 | 335357
6 | 21428022 | 4733035 | 423289790 | 25.7 | 43 | 14927 | 71 | 240 | 971 | 4158 | 0.019 | 40001 | 14505835 | 67.696 | 404945
7 | 21479742 | 4268210 | 380489586 | 25.7 | 37 | 14464 | 66 | 221 | 919 | 4270 | 0.02 | 46946 | 13303817 | 61.937 | 365209
8 | 21090670 | 3885961 | 347401745 | 25.7 | 31 | 11587 | 60 | 254 | 1019 | 4072 | 0.019 | 43403 | 11812543 | 56.008 | 277409
9 | 22565831 | 4394600 | 391868425 | 25.7 | 43 | 14628 | 73 | 242 | 983 | 4468 | 0.02 | 55442 | 14390704 | 63.772 | 386665
10 | 22425959 | 4541704 | 406125855 | 25.7 | 37 | 16935 | 65 | 221 | 773 | 2927 | 0.013 | 24666 | 13102558 | 58.426 | 336558
11 | 21282261 | 7845048 | 700071221 | 25.7 | 49 | 14138 | 76 | 237 | 1145 | 5548 | 0.026 | 74903 | 16201947 | 76.129 | 440099
12 | 22424787 | 4899224 | 438511897 | 25.7 | 37 | 15115 | 64 | 216 | 850 | 3657 | 0.016 | 36708 | 12859614 | 57.346 | 329066
13 | 22240241 | 9811586 | 878337258 | 25.7 | 55 | 12715 | 80 | 270 | 1405 | 7179 | 0.032 | 77001 | 17865166 | 80.328 | 507267
14 | 21322229 | 4165083 | 371089086 | 25.7 | 31 | 13860 | 50 | 220 | 793 | 2927 | 0.014 | 27508 | 10993589 | 51.559 | 244278
15 | 21311647 | 4946404 | 432420944 | 25.7 | 31 | 20352 | 51 | 227 | 711 | 2120 | 0.01 | 32964 | 14489729 | 67.99 | 333674
16 | 21517352 | 3529661 | 315012125 | 25.7 | 31 | 12589 | 59 | 251 | 919 | 3449 | 0.016 | 29495 | 11577737 | 53.807 | 268039
17 | 22101535 | 4271937 | 380375688 | 25.7 | 31 | 14668 | 57 | 214 | 779 | 2850 | 0.013 | 27303 | 11433180 | 51.73 | 218823
18 | 22188520 | 6885704 | 613725181 | 25.7 | 49 | 14539 | 78 | 242 | 1099 | 4890 | 0.022 | 82561 | 15991292 | 72.07 | 432709
19 | 21905245 | 7118903 | 634060836 | 25.7 | 49 | 13970 | 78 | 232 | 1190 | 5998 | 0.027 | 49288 | 16631539 | 75.925 | 465551
20 | 22080383 | 4436059 | 393715449 | 25.7 | 37 | 15370 | 68 | 215 | 896 | 4080 | 0.018 | 44738 | 13779966 | 62.408 | 340050
21 | 21901719 | 6065773 | 542021712 | 25.7 | 49 | 14834 | 76 | 254 | 1070 | 4777 | 0.022 | 69215 | 15880189 | 72.507 | 479697
22 | 22196755 | 4867587 | 433692350 | 25.7 | 37 | 14768 | 67 | 225 | 918 | 4078 | 0.018 | 38921 | 13568816 | 61.13 | 334953
23 | 22163838 | 7194596 | 642735537 | 25.7 | 43 | 17990 | 72 | 217 | 832 | 3441 | 0.016 | 33278 | 14985009 | 67.61 | 389769
24 | 22119177 | 5767493 | 513952604 | 25.7 | 43 | 16048 | 71 | 225 | 918 | 4338 | 0.02 | 60618 | 14732795 | 66.606 | 347199
25 | 21944034 | 4620823 | 412005972 | 25.7 | 31 | 14375 | 59 | 229 | 801 | 2971 | 0.014 | 29831 | 11520520 | 52.5 | 208130
26 | 21686612 | 4474730 | 397499501 | 25.7 | 37 | 14998 | 66 | 226 | 910 | 3881 | 0.018 | 37780 | 13656659 | 62.973 | 327109
27 | 21660745 | 2471316 | 221410608 | 25.7 | 25 | 9613 | 48 | 317 | 903 | 2512 | 0.012 | 23740 | 8681874 | 40.081 | 180174
28 | 21465632 | 5071479 | 445429023 | 25.7 | 37 | 13739 | 68 | 241 | 1001 | 4417 | 0.021 | 47764 | 13756866 | 64.088 | 426984
29 | 22461225 | 2748836 | 245783521 | 25.7 | 25 | 9375 | 48 | 316 | 978 | 2955 | 0.013 | 31583 | 9177387 | 40.859 | 202670
30 | 21860578 | 3969226 | 355679061 | 25.7 | 31 | 12377 | 58 | 252 | 915 | 3404 | 0.016 | 29597 | 11333184 | 51.843 | 295970
31 | 21936980 | 3693530 | 330145917 | 25.7 | 31 | 11866 | 59 | 269 | 988 | 3632 | 0.017 | 31268 | 11730934 | 53.476 | 300815
32 | 22299018 | 4487392 | 400436034 | 25.7 | 37 | 15220 | 68 | 224 | 901 | 4066 | 0.018 | 40699 | 13717846 | 61.518 | 318112
33 | 21169423 | 3364217 | 299964109 | 25.7 | 31 | 13747 | 58 | 235 | 792 | 2778 | 0.013 | 30227 | 10892891 | 51.456 | 193077
34 | 21167072 | 7045775 | 631585264 | 25.7 | 49 | 13948 | 76 | 252 | 1155 | 5513 | 0.026 | 50814 | 16110721 | 76.112 | 482425
35 | 21936981 | 3602076 | 320854164 | 25.7 | 31 | 12623 | 59 | 237 | 896 | 3652 | 0.017 | 57856 | 11313017 | 51.571 | 273753
36 | 22194398 | 2496637 | 222706872 | 25.7 | 25 | 11433 | 47 | 241 | 714 | 2000 | 0.009 | 18327 | 8166439 | 36.795 | 158554
37 | 22188527 | 6327525 | 565417660 | 25.7 | 43 | 15243 | 73 | 229 | 1011 | 4998 | 0.023 | 36480 | 15414547 | 69.471 | 442168
38 | 21511474 | 7830302 | 702128635 | 25.7 | 55 | 14021 | 77 | 297 | 1169 | 4295 | 0.02 | 45875 | 16390962 | 76.196 | 566348
39 | 22586993 | 6345077 | 567981811 | 25.7 | 49 | 15529 | 78 | 271 | 1075 | 4606 | 0.02 | 79864 | 16696236 | 73.92 | 458733
40 | 22166188 | 5615565 | 501684598 | 25.7 | 43 | 18394 | 71 | 212 | 808 | 3625 | 0.016 | 37371 | 14871828 | 67.092 | 297290
41 | 21531451 | 5621449 | 494635412 | 25.7 | 37 | 14824 | 64 | 231 | 900 | 3927 | 0.018 | 40772 | 13342266 | 61.966 | 405896
42 | 20967248 | 4053176 | 362895061 | 25.7 | 37 | 14867 | 67 | 235 | 898 | 3878 | 0.018 | 63365 | 13364491 | 63.74 | 360054
43 | 22006335 | 3922502 | 351380205 | 25.7 | 31 | 14006 | 59 | 222 | 827 | 3166 | 0.014 | 47411 | 11591975 | 52.676 | 280543
44 | 21919351 | 3087092 | 276751321 | 25.7 | 31 | 12340 | 61 | 256 | 913 | 3212 | 0.015 | 25407 | 11271654 | 51.423 | 272820
45 | 22525873 | 3134389 | 280280308 | 25.7 | 31 | 12979 | 58 | 241 | 865 | 3315 | 0.015 | 32570 | 11237403 | 49.887 | 282589
46 | 21338686 | 5032167 | 441577965 | 25.7 | 25 | 33189 | 47 | 201 | 424 | 795 | 0.004 | 43786 | 14091075 | 66.035 | 286307
47 | 22129749 | 4805295 | 430036591 | 25.7 | 37 | 13773 | 65 | 235 | 981 | 4668 | 0.021 | 40872 | 13514387 | 61.069 | 355536
48 | 21885264 | 2485715 | 220819284 | 25.7 | 25 | 10196 | 47 | 310 | 874 | 2413 | 0.011 | 24764 | 8915555 | 40.738 | 194112
49 | 22639888 | 6507436 | 581143448 | 25.7 | 49 | 16983 | 74 | 266 | 917 | 3226 | 0.014 | 40483 | 15588545 | 68.854 | 522752
50 | 22224960 | 7345901 | 656392115 | 25.7 | 43 | 15263 | 71 | 220 | 1004 | 5066 | 0.023 | 48128 | 15325840 | 68.958 | 411369
51 | 21516173 | 4629406 | 414403861 | 25.7 | 37 | 14413 | 64 | 223 | 939 | 4187 | 0.019 | 44829 | 13541622 | 62.937 | 376330
52 | 21587880 | 4198962 | 374871834 | 25.7 | 31 | 12960 | 56 | 228 | 931 | 3790 | 0.018 | 27974 | 12067422 | 55.899 | 280338
53 | 22588173 | 5766122 | 515595900 | 25.7 | 43 | 15715 | 70 | 239 | 948 | 4284 | 0.019 | 52164 | 14898560 | 65.957 | 430958
54 | 21627843 | 7924057 | 693641087 | 25.7 | 43 | 14664 | 71 | 221 | 1014 | 5052 | 0.023 | 52842 | 14877649 | 68.789 | 440225
55 | 22094486 | 5994640 | 534673014 | 25.7 | 49 | 13459 | 79 | 269 | 1202 | 5680 | 0.026 | 53547 | 16182457 | 73.242 | 496090
56 | 21322240 | 4423531 | 395546861 | 25.7 | 37 | 14260 | 67 | 238 | 900 | 3573 | 0.017 | 36031 | 12834542 | 60.193 | 384832
57 | 21578469 | 7822133 | 699738341 | 25.7 | 49 | 13262 | 78 | 259 | 1221 | 5636 | 0.026 | 61635 | 16206155 | 75.103 | 467556
58 | 21744210 | 6612156 | 590013210 | 25.7 | 43 | 14293 | 75 | 241 | 1116 | 5682 | 0.026 | 63695 | 15954947 | 73.376 | 484989
59 | 21817087 | 4577224 | 406937470 | 25.7 | 37 | 13980 | 68 | 231 | 968 | 4559 | 0.021 | 50474 | 13540248 | 62.063 | 391863
60 | 22193220 | 6746771 | 603323869 | 25.7 | 49 | 14136 | 77 | 260 | 1157 | 5455 | 0.025 | 69380 | 16358471 | 73.709 | 513949
61 | 22311940 | 6124175 | 545422654 | 25.7 | 43 | 15242 | 74 | 245 | 1038 | 5176 | 0.023 | 51011 | 15832743 | 70.961 | 469986
62 | 21980470 | 3649165 | 326299181 | 25.7 | 31 | 11726 | 60 | 274 | 949 | 3286 | 0.015 | 27038 | 11128683 | 50.63 | 287262
63 | 21793575 | 4938768 | 440179156 | 25.7 | 37 | 12827 | 69 | 237 | 1071 | 5028 | 0.023 | 40557 | 13746399 | 63.075 | 386209
64 | 21332808 | 4969989 | 444773026 | 25.7 | 31 | 11413 | 60 | 252 | 1041 | 4584 | 0.021 | 39417 | 11883363 | 55.705 | 313804
65 | 22054525 | 7515170 | 671061579 | 25.7 | 49 | 14392 | 75 | 249 | 1169 | 5761 | 0.026 | 98387 | 16837872 | 76.347 | 494237
66 | 21746566 | 4402825 | 390317665 | 25.7 | 37 | 17057 | 59 | 202 | 779 | 3363 | 0.015 | 37649 | 13299102 | 61.155 | 375076
67 | 22552900 | 5646683 | 491515933 | 25.7 | 31 | 14055 | 54 | 218 | 838 | 3519 | 0.016 | 28537 | 11788041 | 52.268 | 344493
68 | 21721872 | 8998648 | 798180214 | 25.7 | 49 | 14419 | 76 | 237 | 1172 | 6240 | 0.029 | 52352 | 16905511 | 77.827 | 494920
69 | 21469159 | 5252684 | 467028264 | 25.7 | 37 | 13796 | 69 | 250 | 990 | 4240 | 0.02 | 40388 | 13658254 | 63.618 | 372800
70 | 22110944 | 8866848 | 788965788 | 25.7 | 49 | 13511 | 78 | 239 | 1222 | 5685 | 0.026 | 52067 | 16513747 | 74.686 | 493338
71 | 21668984 | 9012184 | 800430290 | 25.7 | 55 | 13081 | 79 | 299 | 1330 | 5700 | 0.026 | 72775 | 17405552 | 80.325 | 623203
72 | 21497376 | 6493807 | 575094213 | 25.7 | 43 | 15309 | 73 | 242 | 1029 | 4885 | 0.023 | 57975 | 15764579 | 73.333 | 510550
73 | 21329281 | 6971198 | 621085394 | 25.7 | 43 | 14342 | 73 | 237 | 1051 | 5224 | 0.024 | 49552 | 15078608 | 70.694 | 458884
74 | 22624609 | 4730424 | 419582392 | 25.7 | 37 | 13453 | 68 | 248 | 1009 | 4349 | 0.019 | 37255 | 13578801 | 60.018 | 405545
75 | 21676035 | 3228801 | 287616300 | 25.7 | 31 | 12431 | 60 | 273 | 870 | 2673 | 0.012 | 47976 | 10816016 | 49.898 | 285992
76 | 21885264 | 11348381 | 1006323260 | 25.7 | 55 | 14788 | 78 | 248 | 1154 | 5417 | 0.025 | 52776 | 17074659 | 78.019 | 522363
77 | 22147377 | 9082378 | 802682426 | 25.7 | 49 | 15896 | 75 | 245 | 1033 | 4520 | 0.02 | 43282 | 16435329 | 74.209 | 497982
78 | 22008679 | 6327119 | 557443087 | 25.7 | 37 | 13246 | 66 | 228 | 1049 | 5366 | 0.024 | 40398 | 13896558 | 63.141 | 385874
79 | 22079207 | 4699815 | 420297811 | 25.7 | 37 | 13399 | 66 | 248 | 987 | 4372 | 0.02 | 37709 | 13228227 | 59.913 | 401545
80 | 21390402 | 4677178 | 409646736 | 25.7 | 37 | 14124 | 67 | 249 | 959 | 4083 | 0.019 | 33956 | 13551713 | 63.354 | 434674
81 | 22174409 | 6613038 | 588949947 | 25.7 | 43 | 14623 | 73 | 240 | 1058 | 5193 | 0.023 | 45149 | 15483753 | 69.827 | 464849
82 | 21483260 | 7416277 | 662094719 | 25.7 | 43 | 14507 | 74 | 235 | 1066 | 5099 | 0.024 | 46642 | 15465735 | 71.99 | 442893
83 | 22696312 | 4110789 | 367501977 | 25.7 | 37 | 15538 | 59 | 228 | 838 | 3337 | 0.015 | 39144 | 13031224 | 57.416 | 361019
84 | 22018093 | 9517977 | 848895625 | 25.7 | 55 | 12679 | 81 | 277 | 1398 | 6459 | 0.029 | 68805 | 17727450 | 80.513 | 579132
85 | 21730107 | 5091430 | 452294249 | 25.7 | 43 | 13640 | 73 | 253 | 1087 | 5077 | 0.023 | 45212 | 14838425 | 68.285 | 480141
86 | 21529104 | 5588354 | 498947041 | 25.7 | 49 | 12647 | 78 | 271 | 1266 | 6172 | 0.029 | 45773 | 16020635 | 74.414 | 507739
87 | 22476502 | 4151902 | 369688536 | 25.7 | 37 | 13669 | 68 | 239 | 1001 | 4516 | 0.02 | 42659 | 13683529 | 60.879 | 413347
88 | 21080090 | 4885873 | 437085359 | 25.7 | 43 | 13009 | 73 | 293 | 1098 | 4195 | 0.02 | 41534 | 14290012 | 67.789 | 490220
89 | 22127403 | 8655392 | 770231656 | 25.7 | 49 | 13585 | 76 | 232 | 1190 | 6167 | 0.028 | 68896 | 16179321 | 73.119 | 465714
90 | 21795926 | 4634359 | 415032865 | 25.7 | 31 | 11554 | 59 | 265 | 1032 | 4191 | 0.019 | 39318 | 11927164 | 54.722 | 343502
91 | 21858231 | 4819461 | 429544942 | 25.7 | 31 | 11136 | 58 | 260 | 1049 | 4662 | 0.021 | 57562 | 11682049 | 53.445 | 309910
AVERAGE