Spreadsheet: 674b70b3-7ecc-41d5-9962-ac79e201a73e
Sheet: Sheet1

Table S2 A total of 9,539 isotigs from C. ensifolium transcriptome were involved in 123 pathways with reference to Oryza sativa | Unnamed: 1 | Unnamed: 2
Pathway accession | Reference pathway | Number of isotigs
dosa01100 | Metabolic pathways | 1378
[NAME] | Biosynthesis of secondary metabolites | 714
dosa03010 | Ribosome | 241
[NAME] | Biosynthesis of amino acids | 209
[NAME] | Carbon metabolism | 201
[NAME] | Plant hormone signal transduction | 190
dosa04141 | Protein processing in endoplasmic reticulum | 183
dosa03040 | Spliceosome | 173
dosa03013 | RNA transport | 145
dosa04626 | Plant-pathogen interaction | 128
dosa00230 | Purine metabolism | 126
[NAME] | Glycolysis / Gluconeogenesis | 115
dosa00500 | Starch and sucrose metabolism | 112
dosa00190 | Oxidative phosphorylation | 111
dosa04120 | Ubiquitin mediated proteolysis | 108
[NAME] | Phenylpropanoid biosynthesis | 98
[NAME] | Amino sugar and nucleotide sugar metabolism | 96
dosa00240 | Pyrimidine metabolism | 96
dosa03015 | mRNA surveillance pathway | 95
dosa03018 | RNA degradation | 84
dosa03008 | Ribosome biogenesis in eukaryotes | 82
dosa04144 | Endocytosis | 79
dosa00360 | Phenylalanine metabolism | 79
dosa00270 | Cysteine and methionine metabolism | 76
dosa04146 | Peroxisome | 73
dosa00480 | Glutathione metabolism | 73
dosa00710 | Carbon fixation in photosynthetic organisms | 72
dosa00620 | Pyruvate metabolism | 72
dosa04145 | Phagosome | 71
dosa00564 | Glycerophospholipid metabolism | 67
[NAME] | Proteasome | 60
dosa03420 | Nucleotide excision repair | 59
dosa00330 | Arginine and proline metabolism | 56
[NAME] | Aminoacyl-tRNA biosynthesis | 52
dosa00051 | Fructose and mannose metabolism | 52
dosa03060 | Protein export | 50
dosa00630 | Glyoxylate and dicarboxylate metabolism | 50
dosa00020 | Citrate cycle (TCA cycle) | 49
dosa03440 | Homologous recombination | 48
[NAME] | DNA replication | 47
dosa01210 | 2-Oxocarboxylic acid metabolism | 47
dosa00195 | Photosynthesis | 47
dosa00260 | Glycine, serine and threonine metabolism | 46
dosa00030 | Pentose phosphate pathway | 46
dosa00052 | Galactose metabolism | 45
dosa00561 | Glycerolipid metabolism | 44
dosa00562 | Inositol phosphate metabolism | 43
dosa00400 | Phenylalanine, tyrosine and tryptophan biosynthesis | 42
[NAME] | Alanine, aspartate and glutamate metabolism | 41
dosa00071 | Fatty acid metabolism | 41
dosa03022 | Basal transcription factors | 40
dosa04070 | Phosphatidylinositol signaling system | 39
dosa00900 | Terpenoid backbone biosynthesis | 39
dosa01040 | Biosynthesis of unsaturated fatty acids | 37
dosa00860 | Porphyrin and chlorophyll metabolism | 37
dosa00280 | [NAME], leucine and isoleucine degradation | 37
dosa00510 | N-Glycan biosynthesis | 36
dosa00350 | Tyrosine metabolism | 36
dosa00053 | Ascorbate and aldarate metabolism | 36
dosa03410 | Base excision repair | 35
dosa00040 | Pentose and glucuronate interconversions | 35
dosa03430 | Mismatch repair | 34
dosa03020 | RNA polymerase | 34
dosa00910 | Nitrogen metabolism | 32
[NAME] | Ubiquinone and other terpenoid-quinone biosynthesis | 32
[NAME] | alpha-Linolenic acid metabolism | 31
dosa04130 | SNARE interactions in vesicular transport | 30
dosa00920 | Sulfur metabolism | 30
[NAME] | Fatty acid biosynthesis | 29
dosa00770 | Pantothenate and CoA biosynthesis | 27
dosa00410 | beta-Alanine metabolism | 27
dosa00460 | Cyanoamino acid metabolism | 26
[NAME] | Carotenoid biosynthesis | 24
dosa00100 | Steroid biosynthesis | 24
dosa00650 | Butanoate metabolism | 23
dosa00600 | Sphingolipid metabolism | 23
dosa00563 | [NAME] (GPI)-anchor biosynthesis | 23
dosa00565 | Ether lipid metabolism | 22
dosa04712 | Circadian rhythm - plant | 21
dosa00640 | Propanoate metabolism | 21
dosa00380 | Tryptophan metabolism | 21
dosa00950 | Isoquinoline alkaloid biosynthesis | 20
dosa00780 | Biotin metabolism | 20
dosa00062 | Fatty acid elongation | 19
dosa04140 | Regulation of autophagy | 17
[NAME] | Flavonoid biosynthesis | 17
dosa00290 | [NAME], leucine and isoleucine biosynthesis | 17
dosa00960 | Tropane, piperidine and pyridine alkaloid biosynthesis | 16
dosa00908 | [NAME] biosynthesis | 16
[NAME] | One carbon pool by folate | 16
dosa00340 | Histidine metabolism | 16
dosa00790 | Folate biosynthesis | 15
dosa00591 | Linoleic acid metabolism | 14
dosa00430 | Taurine and hypotaurine metabolism | 14
[NAME] | Photosynthesis - antenna proteins | 14
dosa00073 | Cutin, suberine and wax biosynthesis | 14
dosa00904 | [NAME] biosynthesis | 13
dosa00450 | Selenocompound metabolism | 13
[NAME] | Lysine biosynthesis | 13
dosa04122 | Sulfur relay system | 12
dosa00760 | Nicotinate and nicotinamide metabolism | 12
[NAME] | Lysine degradation | 12
dosa02010 | ABC transporters | 11
dosa01220 | Degradation of aromatic compounds | 11
dosa00730 | Thiamine metabolism | 11
[NAME] | Arachidonic acid metabolism | 11
dosa00511 | Other glycan degradation | 11
[NAME] | Stilbenoid, diarylheptanoid and gingerol biosynthesis | 10
dosa00905 | Brassinosteroid biosynthesis | 9
[NAME] | Glycosphingolipid biosynthesis - globo series | 9
dosa00903 | [NAME] and pinene degradation | 8
dosa00750 | [NAME] metabolism | 8
dosa00531 | Glycosaminoglycan degradation | 8
dosa00740 | [NAME] metabolism | 7
[NAME] | Synthesis and degradation of ketone bodies | 7
[NAME] | Non-homologous end-joining | 6
dosa00604 | Glycosphingolipid biosynthesis - ganglio series | 6
dosa00944 | Flavone and flavonol biosynthesis | 4
dosa00909 | Sesquiterpenoid and triterpenoid biosynthesis | 4
dosa00785 | Lipoic acid metabolism | 4
[NAME] | C5-Branched dibasic acid metabolism | 4
dosa00514 | Other types of O-glycan biosynthesis | 2
dosa00232 | Caffeine metabolism | 2