Spreadsheet: e6e10528-fabd-42cb-be40-4330c6542ece
Sheet: Sheet1

Gene | CloneType | Length | NumSNPs | NumHaps | UW_BestBF | UC_BestBF | NumTestedHaps | NumTestedClones | MEModel_Hap_pvalue | Build | Chr | LocusStart | [NAME] | Strand | [NAME] | Prom/UTR Relative Pos
bex5 | Promoter | 870 | 2 | 3 | 7.539 | NA | 3 | 9 | 0.55 | hg18 | chrX | 101294340 | 101298685 | strand:- | 132;783 | -869;-218
churc1 | Promoter | 119 | 1 | 2 | 9.555 | 27.067 | 2 | 6 | 0.362 | hg18 | chr14 | 64449893 | 64472666 | strand:+ | 883 | -118
erap2 | Promoter | 762 | 4 | 4 | 12.026 | 32.477 | 4 | 11 | 0.0269 | hg18 | chr5 | 96240024 | 96280367 | strand:+ | 240;314;392;521 | -761;-687;-609;-480
fam118a | Promoter | 600 | 2 | 3 | 7.231 | 18.615 | 3 | 9 | 0.727 | hg18 | chr22 | 44083071 | 44116602 | strand:+ | 32029;32080;32362;32466;32885;32905;33076;33082;33382 | 147;198;480;584;1003;1023;1194;1200;1500
fam118a | TP_UTR | 1550 | 9 | 5 | 7.231 | 18.615 | 3 | 14 | 0.0133 | hg18 | chr22 | 44083071 | 44116602 | strand:+ | 77;223 | -599;-453
ipo8 | Promoter | 441 | 1 | 2 | 13.604 | 1.853 | 2 | 6 | 0.307 | hg18 | chr12 | 30673033 | 30741918 | strand:- | 1461 | -440
ipo8 | TP_UTR | 1872 | 13 | 9 | 13.604 | 1.853 | 6 | 29 | 0.034* | hg18 | chr12 | 30673033 | 30741918 | strand:- | 66909;67106;67177;67468;67526;68006;68054;68117;68160;68242;68250;68351;68576 | 50;247;318;609;667;1147;1195;1258;1301;1383;1391;1492;1717
irf5 | Promoter | 698 | 5 | 6 | 5.263 | 30.843 | 5 | 18 | 0.911 | hg18 | chr7 | 128364229 | 128378324 | strand:+ | 304;311;332;345;624 | -697;-690;-669;-656;-377
irf5 | TP_UTR | 1217 | 4 | 4 | 5.263 | 30.843 | 4 | 11 | 0.442 | hg18 | chr7 | 128364229 | 128378324 | strand:+ | 12007;12434;12495;12640 | 127;554;615;760
ldhc | Promoter | 591 | 6 | 7 | 8.848 | 18.457 | 5 | 21 | 8.67e-09 | hg18 | chr11 | 18389433 | 18430369 | strand:+ | 411;602;863;903;923;983 | -590;-399;-138;-98;-78;-18
loc400566 | Promoter | 8332 | 5 | 4 | 8.638 | NA | 3 | 9 | 0.335 | hg18 | chr17 | 259433 | 265713 | strand:+ | 170;187;245;531;821 | -831;-814;-756;-470;-180
oas1 | Promoter | 594 | 1 | 2 | 8.447 | 1.916 | 2 | 6 | 0.937 | hg18 | chr12 | 111828122 | 111843094 | strand:+ | 408 | -593
oas1 | TP_UTR | 354 | 1 | 2 | 8.447 | 1.916 | 2 | 8 | 0.285 | hg18 | chr12 | 111828122 | 111843094 | strand:+ | 13704 | 83
pilrb | TP_UR | 1452 | 2 | 3 | 10.63 | 14.188 | 2 | 10 | 0.532 | hg18 | chr7 | 99770673 | 99804387 | strand:+ | 32549;32597 | 284;332
pomzp3 | Promoter | 770 | 3 | 4 | 7.573 | 8.492 | 3 | 11 | 0.558 | hg18 | chr7 | 76076240 | 76095556 | strand:- | 232;342;346 | -769;-659;-655
pomzp3 | TP_UTR | 242 | 3 | 4 | 7.573 | 8.492 | 3 | 14 | 0.273 | hg18 | chr7 | 76076240 | 76095556 | strand:- | 18118;18142;18159 | 38;62;79
prmt6 | Promoter | 408 | 2 | 2 | 8.856 | 30.836 | 2 | 6 | 0.000205 | hg18 | chr1 | 107399932 | 107404437 | strand:+ | 594;850 | -407;-151
prmt6 | TP_UTR | 1449 | 1 | 2 | 8.856 | 30.836 | 2 | 8 | 0.269 | hg18 | chr1 | 107399932 | 107404437 | strand:+ | 2461 | 403
pter | Promoter | 932 | 4 | 6 | 9.756 | 7.537 | 3 | 12 | 0.00272 | hg18 | chr10 | 16517972 | 16596742 | strand:+ | 70;312;339;426 | -931;-689;-662;-575
pter | TP_UTR | 2481 | 15 | 12 | 9.756 | 7.537 | 8 | 36 | 0.328 | hg18 | chr10 | 16517972 | 16596742 | strand:+ | 75389;75752;75992;76288;76407;76443;76595;76757;76761;76831;77366;77465;77498;77522;77562 | 99;462;702;998;1117;1153;1305;1467;1471;1541;2076;2175;2208;2232;2272
rabep1 | Promoter | 518 | 2 | 3 | 8.623 | 31.261 | 2 | 8 | 0.175 | hg18 | chr17 | 5125282 | 5231856 | strand:+ | 102135;102732;102847;103378;103450;103505;103518;103611;103635;104192;104202;104226;104415;104460 | 173;770;885;1416;1488;1543;1556;1649;1673;2230;2240;2264;2453;2498
rabep1 | TP_UTR | 2603 | 14 | 10 | 8.623 | 31.261 | 8 | 30 | 0.0257 | hg18 | chr17 | 5125282 | 5231856 | strand:+ | 484;647 | -517;-354
usmg5 | Promoter | 906 | 1 | 2 | 10.959 | 2.106 | 2 | 6 | 0.505 | hg18 | chr10 | 105137803 | 105147213 | strand:- | 96 | -905
*p-value for 1311 G-bearing vs 1311 T-bearing haplotypes is 0.00095