Spreadsheet: 0bea77e5-92d0-4971-a440-4252b908ddd6
Sheet: Suppl Tab 2b

Table S2b: TFM Explorer results
Overrepresented transcription factor binding sites (TFBSs) for each cluster were predicted using Transcription Factor Matrix (TFM) Explorer (see methods for scanning parameters). Identified TFBSs are given with their rank (most significant first); matrix name; transcription factor name; information of content of the matrix; gc content of the matrix (G+C)%; location of the identified binding sites (relative to TSS); and p-value. For each identified TFBS the entire list of hits in all input sequences is also given, Information includes gene name; location (position and strand orientation) of binding motif; matrix similarity; and motif instance.
Results for Cluster 1:
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
1 | V$NFY_01 | NF-Y | 12.7728840972 | 0.523544444998 | - 172 : 11 | 3.76852219315e-15
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 9930104L06Rik | -129 | -113 | + | 8.03 | CCTAGCCAATAGCAAA
 |  | 9930104L06Rik | -89 | -73 | + | 7.09 | CACGCCCAATCACAAT
 |  | 9930104L06Rik | -55 | -39 | + | 7.7 | GCCAGCCAATCCTCAT
 |  | A430033K04Rik | -91 | -75 | + | 8.91 | TCTGTCCAATCAGAGG
 |  | A430033K04Rik | -61 | -45 | + | 6.93 | CGTGCCCAATCAGACA
 |  | Adhfe1 | -85 | -69 | - | 5.13 | GTTTTGGTTGGTCAGT
 |  | Arl6ip1 | -136 | -120 | - | 10.57 | ACTCTGATTGGTCAGA
 |  | Arl6ip1 | -71 | -55 | - | 5.07 | CTGCCGGTTGGCCCGA
 |  | Arl6ip1 | -33 | -17 | + | 7.22 | TCTACCCAATGAGGAG
 |  | Bscl2 | 11 | 27 | - | 7.31 | TTGGGCATTGGCTGCC
 |  | Cabyr | -84 | -68 | - | 9.36 | CTCCCTATTGGCTGGG
 |  | Ddx41 | -7 | 9 | + | 5 | CAGACCCAATTGGCTC
 |  | Dhx38 | -170 | -154 | - | 6.57 | AGCGCGATTGGTCGCA
 |  | Gm10062 | -145 | -129 | - | 4.89 | GTGCCGCTTGGCCAGG
 |  | Ercc8 | -34 | -18 | - | 11.53 | TCGCTGATTGGCCAAT
 |  | Fam126a | -105 | -89 | - | 9.71 | ATTCTCATTGGTGGAG
 |  | Fam126a | -63 | -47 | - | 5.96 | TCAGTGATAGGCTGAT
 |  | Fam126a | -34 | -18 | - | 6.02 | GTGGTGGTTGGCTGCT
 |  | Fam132a | -10 | 6 | + | 5.64 | AGTGCCCAATGAGTCC
 |  | Gtse1 | -104 | -88 | + | 8.07 | CGGAGCCAATCCGTGG
 |  | Gtse1 | -79 | -63 | - | 5.07 | TTGGGCATTGGTCTTG
 |  | Gtse1 | -7 | 9 | + | 10.19 | ACAGGCCAATCGGCGG
 |  | Lztfl1 | -164 | -148 | - | 6.38 | GTTGCCATTGGCAACG
 |  | Lztfl1 | -36 | -20 | + | 8.87 | GAGAGCCAATGATAGC
 |  | Lztfl1 | 6 | 22 | - | 7.63 | GTTCCCATTGGCAACG
 |  | Mylip | -114 | -98 | - | 5.27 | CTGGGAATTGGTTGCC
 |  | Mylip | -73 | -57 | - | 10 | GCTGTGATTGGCGGAG
 |  | Nfkb2 | -86 | -70 | + | 7.92 | TTCAACCAATAAAAAA
 |  | Nfkbia | -172 | -156 | + | 5.34 | TCCAGCCACTCAGGGC
 |  | Plat | -99 | -83 | - | 6.45 | TGCTCCATTGGCTCCT
 |  | Plat | -21 | -5 | - | 5.22 | CTTCAAATTGGCTGGA
 |  | Relb | -56 | -40 | + | 9.85 | [NAME]
 |  | Sgms2 | -51 | -35 | - | 5.21 | AGAGTGATTGGATGTT
 |  | Slc25a37 | 1 | 17 | - | 5.03 | CCAGCTATTGGTGCTT
 |  | Smg1 | -121 | -105 | + | 5.56 | TGTGACCAATAGCCCC
 |  | Thop1 | -104 | -88 | + | 5.04 | ACTCACCTATGACAGC
 |  | Trim13 | -17 | -1 | - | 5.5 | ATAGCCATTGGATGGA
 |  | Uap1 | -92 | -76 | - | 6.49 | CATCCTATTGGGCAAG
 |  | Zfp830 | -52 | -36 | + | 11.16 | GTGGGCCAATCGGCGC
 |  | Cxcl10 | -59 | -43 | + | 11.54 | [NAME]
 |  | Stat2 | -168 | -152 | + | 8.29 | CTCCGCCAATCACTGA
 |  | Stat2 | -96 | -80 | + | 10.94 | TTCAGCCAATGAGAGT
 |  | Tapbp | -171 | -155 | - | 6.45 | ATATTTATTGGTCACT
 |  | Rnd1 | -114 | -98 | - | 7.57 | CCTACTATTGGCTGCA
 |  | Rnd1 | -83 | -67 | - | 5.34 | TTAGGGATTGGCCTGG
 |  | Rnd1 | -51 | -35 | - | 8.28 | CTTGTGATTGGATCAG
 |  | Il6 | -158 | -142 | + | 5.24 | GGTTTCCAATCAGCCC
 |  | Irf1 | -68 | -52 | + | 10.6 | GTGGGCCAATGGGCGC
 |  | Trim26 | -56 | -40 | - | 7.87 | GTTCCCATTGGAGGAT
 |  | Trim26 | -30 | -14 | + | 7.65 | AAGAGCCAATCCCAGG
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
2 | V$NFY_Q6 | NF-Y | 11.9351525509 | 0.472727279771 | - 133 : 9 | 2.35693936876e-11
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 9930104L06Rik | -127 | -116 | + | 8.77 | TAGCCAATAGC
 |  | 9930104L06Rik | -87 | -76 | + | 6.78 | CGCCCAATCAC
 |  | A430033K04Rik | -89 | -78 | + | 7.93 | TGTCCAATCAG
 |  | A430033K04Rik | -59 | -48 | + | 7.93 | TGCCCAATCAG
 |  | Arl6ip1 | -133 | -122 | - | 10.28 | CTGATTGGTCA
 |  | Arl6ip1 | -31 | -20 | + | 8.02 | TACCCAATGAG
 |  | Cabyr | -81 | -70 | - | 7.35 | CCTATTGGCTG
 |  | Ddx41 | -2 | 9 | - | 6.57 | CCAATTGGCTC
 |  | Ercc8 | -31 | -20 | - | 9.83 | CTGATTGGCCA
 |  | Fam126a | -102 | -91 | - | 7.8 | CTCATTGGTGG
 |  | Fam132a | -108 | -97 | - | 6.43 | ATCACTGGTCA
 |  | Fam132a | -8 | 3 | + | 7.42 | TGCCCAATGAG
 |  | Gtse1 | -5 | 6 | + | 7.55 | AGGCCAATCGG
 |  | Lztfl1 | -72 | -61 | + | 5.52 | TAGCCAGTTAC
 |  | Lztfl1 | -34 | -23 | + | 8.37 | GAGCCAATGAT
 |  | Mylip | -70 | -59 | - | 7.99 | GTGATTGGCGG
 |  | Nfkb2 | -84 | -73 | + | 6.5 | CAACCAATAAA
 |  | Nfkbia | -130 | -119 | - | 6.2 | CCCAGTGGCTC
 |  | Nfkbia | -40 | -29 | - | 5.96 | CTGACTGGCTT
 |  | Plat | -96 | -85 | - | 6.42 | TCCATTGGCTC
 |  | Plat | -18 | -7 | - | 5.6 | CAAATTGGCTG
 |  | Relb | -54 | -43 | + | 8.32 | GAGCCAATGGG
 |  | Sgms2 | -48 | -37 | - | 7.38 | GTGATTGGATG
 |  | Slc25a37 | -35 | -24 | + | 6.93 | GCACCAATAGC
 |  | Slc25a37 | 4 | 15 | - | 6.93 | GCTATTGGTGC
 |  | Smg1 | -119 | -108 | + | 8.62 | TGACCAATAGC
 |  | Thop1 | -92 | -81 | + | 6.42 | CAGCCAATTGC
 |  | Thop1 | -48 | -37 | + | 6.1 | GCACCACTGAC
 |  | Thop1 | 9 | 20 | - | 5.52 | CAGACTGGTTG
 |  | Trim13 | -14 | -3 | - | 6.27 | GCCATTGGATG
 |  | Uap1 | -89 | -78 | - | 6.14 | CCTATTGGGCA
 |  | Usf1 | -103 | -92 | + | 7.01 | CGACCACTCAC
 |  | Zfp830 | -50 | -39 | + | 8.23 | GGGCCAATCGG
 |  | Cxcl10 | -57 | -46 | + | 9.15 | CAGCCAATCAG
 |  | Stat2 | -94 | -83 | + | 8.64 | CAGCCAATGAG
 |  | Rnd1 | -111 | -100 | - | 6.8 | ACTATTGGCTG
 |  | Rnd1 | -48 | -37 | - | 7.66 | GTGATTGGATC
 |  | Irf1 | -66 | -55 | + | 7.72 | GGGCCAATGGG
 |  | Vcam1 | -122 | -111 | - | 8.39 | GTCAGTGGTTA
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
3 | V$GC_01 | GC box | 11.5380830882 | 0.682481751374 | -61:-13 | 5.99164000171e-10
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 9030425E11Rik | -48 | -34 | + | 6.82 | GGAGGGCGGGAGCG
 |  | 9030425E11Rik | -19 | -5 | + | 6.88 | GAGGGGAGGGATGG
 |  | A430033K04Rik | -38 | -24 | + | 6.13 | GGAGGGTAGGGGCG
 |  | Zfp945 | -49 | -35 | + | 5.98 | TACAGGAGGAGCTT
 |  | Alkbh4 | -55 | -41 | - | 9.38 | ACGCCCCACCTCCT
 |  | Birc3 | -54 | -40 | + | 8.42 | TGAGGGTGGGGTGG
 |  | Cabyr | -50 | -36 | + | 11.09 | AGGGGGCGGGGCTC
 |  | Fam132a | -49 | -35 | - | 8.69 | CCGCCCCGCCCTGC
 |  | Fam132a | -34 | -20 | - | 8.84 | CCGCCCCGCCTTCC
 |  | [NAME] | -44 | -30 | + | 6.77 | TGTGGGAGGGCTCT
 |  | [NAME] | -24 | -10 | + | 6.26 | CGTGGGAGGGACCA
 |  | Mylip | -47 | -33 | + | 11.36 | GAGGGGCGGGGCCT
 |  | Nfkb1 | -61 | -47 | - | 6.17 | TTCCCCCACCCCCG
 |  | Nfkb1 | -43 | -29 | - | 8.43 | CGACCCCACCTCCC
 |  | Nfkbia | -13 | 1 | - | 9.4 | TGACCCCGCCCCTG
 |  | [NAME] | -31 | -17 | + | 9.87 | CGGGGGCGGGGCGA
 |  | Pion | -50 | -36 | + | 9 | AAGGGGCGGTGCTC
 |  | Plat | -60 | -46 | - | 10.6 | AAACCCCGCCCACA
 |  | Plat | -42 | -28 | - | 9.93 | TGGCCCCACCCCTT
 |  | Relb | -13 | 1 | - | 10.86 | CCGCCCCGCCCCCG
 |  | Sdcbp2 | -17 | -3 | - | 5.9 | CCACCCTTCCCAGA
 |  | Smg1 | -61 | -47 | - | 9.49 | CGGCACCGCCCCTC
 |  | Smg1 | -15 | -1 | + | 7.67 | GGCGGGCGGAGCCG
 |  | Taf5 | -55 | -41 | - | 8 | ACGCCCTACCCCCG
 |  | Thop1 | -19 | -5 | + | 8.33 | TGTGGGCGGAACCG
 |  | Tnfrsf4 | -50 | -36 | - | 7.31 | TTGCCCCACCTCCA
 |  | Trim13 | -44 | -30 | + | 9.46 | TGGGGGAGGAGCTA
 |  | Ttc39c | -42 | -28 | - | 7.68 | AGGCCACGCCCTAC
 |  | Ttc39c | -14 | 0 | - | 6.38 | GTCCCCCACCCCCA
 |  | Uap1 | -58 | -44 | - | 7.36 | [NAME]
 |  | Usf1 | -18 | -4 | + | 6.44 | GCTGGGCGGGTCGA
 |  | Ifit1 | -41 | -27 | - | 6.27 | AGAGCACACCCCCT
 |  | Tapbp | -54 | -40 | + | 8.8 | GGAGGGCGGAGTCT
 |  | [NAME] | -40 | -26 | - | 11.08 | CCGCCCCGCCCCCC
 |  | [NAME] | -22 | -8 | - | 7 | CCCCCCCTCCCCAG
 |  | Irf1 | -37 | -23 | + | 9.83 | CGGGGGCGTGGCCG
 |  | Tcirg1 | -49 | -35 | - | 7.85 | CACCCCCACCCCGC
 |  | Tcirg1 | -22 | -8 | + | 8.05 | GGGGGGCGGGACAG
 |  | Ccl2 | -47 | -33 | - | 7.78 | TGACTCCACCCCCC
 |  | Znfx1 | -42 | -28 | - | 9.18 | TAGCCCCTCCCCGT
 |  | Ccl7 | -52 | -38 | - | 5.86 | AGATCCCTCCCTAT
 |  | Ccl7 | -22 | -8 | + | 9.12 | AGGAGGCAGAGCTG
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
4 | V$CAAT_01 | CCAAT box | 10.751155233 | 0.480000012748 | -132:-7 | 1.38719125571e-09
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 9930104L06Rik | -129 | -117 | + | 8.46 | CCTAGCCAATAG
 |  | 9930104L06Rik | -89 | -77 | + | 6.5 | CACGCCCAATCA
 |  | 9930104L06Rik | -55 | -43 | + | 5.71 | GCCAGCCAATCC
 |  | A430033K04Rik | -91 | -79 | + | 8.55 | TCTGTCCAATCA
 |  | A430033K04Rik | -61 | -49 | + | 7.31 | CGTGCCCAATCA
 |  | Arl6ip1 | -132 | -120 | - | 9.52 | TGATTGGTCAGA
 |  | Arl6ip1 | -33 | -21 | + | 7.4 | TCTACCCAATGA
 |  | Cabyr | -80 | -68 | - | 7.95 | CTATTGGCTGGG
 |  | Ercc8 | -30 | -18 | - | 10.18 | TGATTGGCCAAT
 |  | Fam132a | -107 | -95 | - | 6.91 | TCACTGGTCATA
 |  | Fam132a | -10 | 2 | + | 6.91 | AGTGCCCAATGA
 |  | Gtse1 | -104 | -92 | + | 6.35 | CGGAGCCAATCC
 |  | Gtse1 | -7 | 5 | + | 8.32 | ACAGGCCAATCG
 |  | Lztfl1 | -36 | -24 | + | 7.04 | GAGAGCCAATGA
 |  | Mylip | -69 | -57 | - | 5.75 | TGATTGGCGGAG
 |  | Nfkb2 | -86 | -74 | + | 7.95 | TTCAACCAATAA
 |  | Nfkbia | -39 | -27 | - | 7.76 | TGACTGGCTTGG
 |  | Plat | -95 | -83 | - | 8.05 | CCATTGGCTCCT
 |  | Relb | -56 | -44 | + | 8.23 | ACGAGCCAATGG
 |  | Sgms2 | -47 | -35 | - | 8 | TGATTGGATGTT
 |  | Smg1 | -121 | -109 | + | 7.19 | TGTGACCAATAG
 |  | Trim13 | -18 | -6 | + | 7.39 | TATAGCCATTGG
 |  | Uap1 | -27 | -15 | - | 6.31 | CCTTTGGCTGTT
 |  | Usf1 | -105 | -93 | + | 6.17 | TGCGACCACTCA
 |  | Zfp830 | -52 | -40 | + | 6.69 | GTGGGCCAATCG
 |  | Cxcl10 | -59 | -47 | + | 8.52 | [NAME]
 |  | Stat2 | -96 | -84 | + | 9.54 | TTCAGCCAATGA
 |  | Rnd1 | -110 | -98 | - | 7.71 | CTATTGGCTGCA
 |  | Rnd1 | -79 | -67 | - | 6.2 | GGATTGGCCTGG
 |  | Rnd1 | -47 | -35 | - | 7.72 | TGATTGGATCAG
 |  | Irf1 | -68 | -56 | + | 6.27 | GTGGGCCAATGG
 |  | Samd9l | -64 | -52 | + | 5.63 | TTTACCCAAACA
 |  | Trim26 | -112 | -100 | - | 7.03 | TCTTTGGCCGCT
 |  | Trim26 | -30 | -18 | + | 6.08 | AAGAGCCAATCC
 |  | Vcam1 | -121 | -109 | - | 6.42 | TCAGTGGTTATT
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
5 | V$SP1_01 | Sp1 | 8.90287601109 | 0.718181824684 | -85:-10 | 5.10670546078e-08
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 9030425E11Rik | -51 | -41 | + | 5.99 | GAGGGAGGGC
 |  | 9030425E11Rik | -18 | -8 | + | 5.99 | AGGGGAGGGA
 |  | A430033K04Rik | -30 | -20 | + | 8.59 | GGGGCGGGCT
 |  | Zfp945 | -57 | -47 | + | 6.14 | TGGGCGGGTA
 |  | Alkbh4 | -53 | -43 | - | 6 | GCCCCACCTC
 |  | Birc3 | -52 | -42 | + | 6.69 | AGGGTGGGGT
 |  | Cabyr | -48 | -38 | + | 8.75 | GGGGCGGGGC
 |  | [NAME] | -66 | -56 | + | 7.37 | GGGGGGGGGC
 |  | Ddx47 | -15 | -5 | - | 5.97 | AGCACGCCTT
 |  | Ercc8 | -77 | -67 | - | 6.14 | TCCGAGCCCC
 |  | Fam132a | -82 | -72 | - | 8.06 | GCCCTGCCCC
 |  | Fam132a | -72 | -62 | - | 7.66 | GCCCCGCCCT
 |  | Fam132a | -62 | -52 | - | 6.69 | GCTCCGCCCC
 |  | Fam132a | -52 | -42 | - | 8.75 | GCCCCGCCCC
 |  | Fam132a | -37 | -27 | - | 6.69 | GCTCCGCCCC
 |  | Mylip | -45 | -35 | + | 8.75 | GGGGCGGGGC
 |  | Nfkb1 | -41 | -31 | - | 7.09 | ACCCCACCTC
 |  | Nfkb2 | -33 | -23 | - | 7.08 | TCCCCCCCTC
 |  | Nfkbia | -11 | -1 | - | 9.84 | [NAME]
 |  | [NAME] | -79 | -69 | + | 7.66 | AGGGCGGGGC
 |  | [NAME] | -67 | -57 | + | 6.81 | TGGGCGTGGC
 |  | [NAME] | -29 | -19 | + | 8.75 | GGGGCGGGGC
 |  | Pion | -85 | -75 | + | 6.4 | GGGGTAGGGA
 |  | Pion | -48 | -38 | + | 7.37 | GGGGCGGTGC
 |  | Plat | -58 | -48 | - | 8.75 | ACCCCGCCCA
 |  | Plat | -40 | -30 | - | 6.69 | GCCCCACCCC
 |  | Relb | -11 | -1 | - | 8.75 | GCCCCGCCCC
 |  | Sdcbp2 | -27 | -17 | + | 7.9 | GGGGCGGGCA
 |  | Smg1 | -59 | -49 | - | 7.37 | GCACCGCCCC
 |  | Taf5 | -77 | -67 | - | 6.81 | GGCCTGCCCC
 |  | Taf5 | -53 | -43 | - | 6 | GCCCTACCCC
 |  | Tnfrsf4 | -48 | -38 | - | 6 | GCCCCACCTC
 |  | Ttc39c | -40 | -30 | - | 6.81 | GCCACGCCCT
 |  | Uap1 | -35 | -25 | - | 7.9 | TGCCCGCCCC
 |  | Zfp830 | -73 | -63 | - | 6.81 | GCCACGCCCA
 |  | Zfp830 | -17 | -7 | - | 6.38 | ATCACGCCTC
 |  | Ifit1 | -22 | -12 | - | 7.66 | ACCCAGCCCT
 |  | Stat2 | -69 | -59 | + | 6.81 | AGGGCGTGGC
 |  | Tapbp | -52 | -42 | + | 6.69 | AGGGCGGAGT
 |  | [NAME] | -43 | -33 | - | 9.15 | TCCCCGCCCC
 |  | [NAME] | -25 | -15 | - | 7.37 | GCCCCCCCCC
 |  | Irf1 | -35 | -25 | + | 7.9 | GGGGCGTGGC
 |  | Ifitm3 | -84 | -74 | - | 6.14 | ATCCTGCCCT
 |  | Ifitm3 | -45 | -35 | - | 9.15 | TCCCCGCCCC
 |  | Tcirg1 | -65 | -55 | - | 7.37 | ACACCGCCCT
 |  | Tcirg1 | -20 | -10 | + | 6.82 | [NAME]
 |  | Tcirg1 | -10 | 0 | + | 6.81 | AGGGCGGGCA
 |  | Ccl2 | -55 | -45 | - | 6.69 | ACCCTGCCTG
 |  | Ccl2 | -43 | -33 | - | 6.93 | TCCACCCCCC
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
6 | V$NFKAPPAB65_01 | NF-kappaB (p65) | 14.7621425402 | 0.56666666617 | - 159 : 36 | 8.95168109263e-07
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | Zfp945 | -10 | 0 | + | 4.36 | [NAME]
 |  | Adhfe1 | 8 | 18 | + | 3.73 | CAGAGTTTCC
 |  | Arl6ip1 | 36 | 46 | + | 4.31 | GGGGCGTTCC
 |  | [NAME] | -90 | -80 | - | 10.63 | GGAAACTCCC
 |  | Dhx38 | 16 | 26 | + | 4.92 | CGGAATTTGC
 |  | Ercc8 | -84 | -74 | + | 3.79 | GGCGTTTTCC
 |  | Gtse1 | -136 | -126 | + | 5.95 | GGGAACTTCC
 |  | Gtse1 | -123 | -113 | + | 10.63 | GGGAGTTTCC
 |  | Lztfl1 | -112 | -102 | + | 4.59 | TGGGACTTCC
 |  | Nfkb1 | -66 | -56 | + | 7.68 | CGGGCTTCCC
 |  | Nfkb1 | 31 | 41 | + | 11.83 | GGGAATTTCC
 |  | Nfkb2 | -40 | -30 | + | 8.41 | CGGGAATTCC
 |  | Nfkb2 | -11 | -1 | + | 10.18 | GGGGCTTTCC
 |  | Nfkbia | -113 | -103 | + | 4.64 | GGGAGTTTCT
 |  | Nfkbia | -30 | -20 | + | 8.86 | TGGAAATTCC
 |  | Nfkbia | 1 | 11 | - | 5.38 | AGAAATCCCC
 |  | [NAME] | -122 | -112 | + | 8.12 | GGGGGATTCC
 |  | Polr2f | -156 | -146 | - | 3.73 | AGAAACTCCA
 |  | Relb | -98 | -88 | + | 4.19 | GGGGGTTTTC
 |  | Relb | -24 | -14 | + | 9.32 | [NAME]
 |  | Suv39h2 | -115 | -105 | - | 4.31 | GGAAGGCCCC
 |  | Tnfrsf4 | -11 | -1 | - | 4.73 | GGAAAAACCC
 |  | Wfikkn1 | 33 | 43 | + | 4.92 | TGGAATTTGC
 |  | Cxcl10 | -159 | -149 | + | 9.77 | GGGAAATTCC
 |  | Cxcl10 | -104 | -94 | + | 5.5 | GGGGACTTCC
 |  | Ifit1 | -141 | -131 | - | 3.97 | GGCAAACCCC
 |  | Rnd1 | -122 | -112 | + | 3.73 | [NAME]
 |  | Il6 | -92 | -82 | + | 4.47 | TGGGATTTTC
 |  | [NAME] | -111 | -101 | + | 5.83 | GGCAATTTCC
 |  | Irf1 | -13 | -3 | + | 7.72 | GGGGAATCCC
 |  | Trim26 | -96 | -86 | + | 5.38 | GGGGATTTGC
 |  | Ifitm3 | -117 | -107 | + | 5.04 | TGGAAGTTCC
 |  | Vcam1 | 22 | 32 | - | 3.82 | GGAAAAGCCA
 |  | Ccl2 | -146 | -136 | - | 5.13 | GGAAACACCC
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
7 | V$NFKAPPAB_01 | NF-kappaB | 13.3557943311 | 0.615000003576 | - 136 : 4 | 9.45335454112e-07
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | A430033K04Rik | 4 | 14 | + | 4.86 | GGGACCCTCC
 |  | Zfp945 | -9 | 1 | - | 5.4 | GGAAATTCCA
 |  | [NAME] | -90 | -80 | - | 8.44 | GGAAACTCCC
 |  | Gtse1 | -136 | -126 | + | 8.15 | GGGAACTTCC
 |  | Gtse1 | -123 | -113 | + | 8.44 | GGGAGTTTCC
 |  | Lztfl1 | -111 | -101 | + | 4.87 | GGGACTTCCG
 |  | Nfkb1 | -65 | -55 | - | 6.5 | GGGCTTCCCC
 |  | Nfkb2 | -39 | -29 | + | 11.29 | GGGAATTCCC
 |  | Nfkb2 | -11 | -1 | + | 10.19 | GGGGCTTTCC
 |  | Nfkbia | -113 | -103 | + | 5.54 | GGGAGTTTCT
 |  | Nfkbia | -29 | -19 | + | 7.72 | GGAAATTCCC
 |  | Nfkbia | 0 | 10 | - | 6.38 | GAGAAATCCC
 |  | [NAME] | -122 | -112 | + | 6.47 | GGGGGATTCC
 |  | [NAME] | -104 | -94 | + | 4.92 | GGGGCTCTAC
 |  | Oasl1 | -13 | -3 | - | 5.4 | GGGACCCCCC
 |  | Plat | -63 | -53 | - | 5.65 | GAGAAACCCC
 |  | Relb | -97 | -87 | + | 9.25 | GGGGTTTTCC
 |  | Relb | -24 | -14 | + | 9.42 | [NAME]
 |  | Slc25a37 | -132 | -122 | + | 6.75 | GGGACACCCC
 |  | Suv39h2 | -115 | -105 | - | 6.95 | GGAAGGCCCC
 |  | Tnfrsf4 | -10 | 0 | - | 5.76 | GAAAAACCCC
 |  | Cxcl10 | -104 | -94 | + | 7.43 | GGGGACTTCC
 |  | Il6 | -91 | -81 | + | 9.97 | GGGATTTTCC
 |  | Il6 | -35 | -25 | + | 4.95 | GGGGATGTCT
 |  | [NAME] | -111 | -101 | + | 5.42 | GGCAATTTCC
 |  | Irf1 | -13 | -3 | + | 9.32 | GGGGAATCCC
 |  | Ifitm3 | -116 | -106 | - | 8.15 | GGAAGTTCCC
 |  | Znfx1 | -13 | -3 | + | 6.59 | GGGGCTTCTC
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
8 | V$NFKB_C | NF-kappaB | 16.584449447 | 0.580626613602 | - 160 : 3 | 1.99533930922e-06
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | A430033K04Rik | 3 | 15 | + | 5.8 | TGGGACCCTCCA
 |  | Zfp945 | -11 | 1 | + | 2.84 | CAGGAAATTCCA
 |  | [NAME] | -91 | -79 | - | 8.39 | TGGAAACTCCCC
 |  | Fam132a | -15 | -3 | - | 2.77 | GTGGAAGTGCCC
 |  | Gtse1 | -137 | -125 | + | 4.09 | TGGGAACTTCCG
 |  | Gtse1 | -124 | -112 | + | 5.44 | TGGGAGTTTCCT
 |  | Lztfl1 | -112 | -100 | + | 4.38 | TGGGACTTCCGG
 |  | Nfkb1 | -66 | -54 | + | 2.95 | CGGGCTTCCCCC
 |  | Nfkb2 | -40 | -28 | + | 9.69 | CGGGAATTCCCC
 |  | Nfkb2 | -12 | 0 | + | 6.32 | AGGGGCTTTCCC
 |  | Nfkbia | -31 | -19 | - | 2.91 | TTGGAAATTCCC
 |  | Nfkbia | -1 | 11 | - | 6.23 | TGAGAAATCCCC
 |  | [NAME] | -122 | -110 | - | 2.68 | GGGGGATTCCGG
 |  | Nif3l1 | -142 | -130 | - | 3.55 | TTAAAAGTCCCA
 |  | Oasl1 | -14 | -2 | + | 5.08 | GGGGACCCCCCC
 |  | Plat | -65 | -53 | - | 4.1 | AGGAGAAACCCC
 |  | Polr2f | -158 | -146 | + | 3.02 | GGAGAAACTCCA
 |  | Relb | -98 | -86 | + | 5.99 | GGGGGTTTTCCC
 |  | Relb | -24 | -12 | + | 4.94 | GGGGAATTCCGC
 |  | Slc25a37 | -133 | -121 | + | 8.13 | CGGGACACCCCA
 |  | Tnfaip3 | -152 | -140 | - | 3.75 | TGTCAATTCCCT
 |  | Tnfrsf4 | -125 | -113 | + | 5.79 | TGGGACTCTGCA
 |  | Tnfrsf4 | -12 | 0 | - | 5.12 | AGGAAAAACCCC
 |  | Cxcl10 | -160 | -148 | + | 9.51 | AGGGAAATTCCA
 |  | Cxcl10 | -104 | -92 | + | 11.15 | GGGGACTTCCCT
 |  | Il6 | -92 | -80 | + | 10.9 | TGGGATTTTCCC
 |  | [NAME] | -112 | -100 | + | 6.18 | AGGCAATTTCCA
 |  | Irf1 | -14 | -2 | - | 8.34 | CGGGGAATCCCG
 |  | Trim26 | -96 | -84 | + | 6.35 | GGGGATTTGCCC
 |  | Ifitm3 | -117 | -105 | - | 6.77 | TGGAAGTTCCCC
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
9 | V$TATA_01 | TATA | 10.0863285279 | 0.376692369239 | - 47 : 28 | 2.11196156303e-06
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | Arl6ip1 | 19 | 34 | + | 8.32 | CTATATAAGCAGACT
 |  | Birc2 | -47 | -32 | + | 5.9 | CTATAAGACGCTGCG
 |  | Birc2 | 4 | 19 | + | 6.64 | ATATAAAATACGAAG
 |  | Cabyr | -14 | 1 | - | 6.5 | CAGGGGTATAAATAG
 |  | [NAME] | -33 | -18 | + | 8.56 | CTATAAAAGGTCTGC
 |  | Gm10062 | -23 | -8 | + | 7.51 | CTATAAAGAGAAACC
 |  | Mylip | -33 | -18 | + | 9.43 | CTATAAAAGACGCGT
 |  | Nfkbia | 18 | 33 | + | 6.18 | GTTTATAGGGCGCCG
 |  | Nif3l1 | -32 | -17 | + | 5.74 | GGATAAAAGCCTTTC
 |  | Tnfaip3 | 21 | 36 | + | 8.56 | CTATAAAAAAGAACC
 |  | Tnfrsf4 | -39 | -24 | - | 5.48 | CCATAGTTCTTATAG
 |  | Trim13 | -28 | -13 | - | 9.55 | GGCTTCTTTTTATAG
 |  | Ifit1 | -14 | 1 | + | 5.86 | CTTTAAAAAAAACCT
 |  | Vcam1 | 28 | 43 | - | 6.1 | GCCAGAGATTTATAT
 |  | Ccl2 | -26 | -11 | + | 6.77 | CAATAAAAGGCTGCC
 |  | Ccl7 | -31 | -16 | + | 9.6 | CTATAAAAGAGGAGG
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
10 | V$STAF_02 | Staf | 17.3019375182 | 0.526455029845 | -49:-7 | 8.16339956045e-06
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 9930104L06Rik | -29 | -8 | + | 7.17 | AATGCCCAGATGTCATTGCGG
 |  | Zfp945 | -7 | 14 | + | 3.57 | AAATTCCACCTTTCCCTGAAG
 |  | Alkbh4 | -24 | -3 | + | 6.52 | AACTCCCAGCGGCCCCTGCGT
 |  | Arl6ip1 | -11 | 10 | - | 11.61 | TCGCGAGGGCTGTCGGGAAAG
 |  | Ddx41 | -26 | -5 | + | 8.61 | GCTACCCACAAGGCTTCGCCA
 |  | Ddx47 | -22 | -1 | + | 12.11 | ATTTCCCAGCACGCCTTGCGC
 |  | Dhx38 | -25 | -4 | - | 13.32 | GCGCAGGGCATTATGGGACGA
 |  | Fam126a | -46 | -25 | - | 4.33 | CAGTGTGGGACGGTGGTGGTT
 |  | Fam132a | -49 | -28 | + | 3.58 | CCGCCCCGCCCTGCTCCGCCC
 |  | Gtse1 | -43 | -22 | + | 12.32 | ATTTCCCAGGCTGCACCGAGA
 |  | [NAME] | -35 | -14 | - | 3.8 | GCTCTAGGGGACGTGGGAGGG
 |  | Oasl1 | -9 | 12 | + | 5.33 | CCCCCCCATAGAGCCATGCTC
 |  | Pion | -42 | -21 | - | 2.9 | GTGCTCGGGATCCTCGGGGCT
 |  | Polr2f | -48 | -27 | + | 3.63 | GCTTCCCGGAAGTAACTGCGC
 |  | Sdcbp2 | -22 | -1 | + | 3.15 | GGGCACCACCCTTCCCAGAGC
 |  | Smg1 | -48 | -27 | + | 13.32 | CGCTCCCAGCATGCCGTGCGG
 |  | Suv39h2 | -7 | 14 | + | 5.74 | CCGCTCCGGAGTCCCTGGCGG
 |  | Tnfrsf4 | -44 | -23 | + | 4.75 | CACCTCCATAGTTCTTATAGC
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
11 | V$FREAC2_01 | Freac-2 | 14.6419817696 | 0.361111104074 | -469:-436 | 1.4653927272e-05
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | A430033K04Rik | -462 | -446 | - | 6.49 | CATTTGTTTATTCGAC
 |  | A430033K04Rik | -442 | -426 | + | 3.83 | CACATGTACACATACT
 |  | Adhfe1 | -441 | -425 | - | 3.78 | GGGGTGTTTTCTTTAA
 |  | Birc2 | -450 | -434 | + | 7.04 | TAATAGTAAATAAATA
 |  | Ddx47 | -449 | -433 | - | 4.69 | GTATTGTTTGCCTTCT
 |  | [NAME] | -461 | -445 | - | 3.67 | CATATGTTTAACGTGA
 |  | Nif3l1 | -463 | -447 | - | 4.48 | TACTTGTTCATCTTTA
 |  | Oasl1 | -468 | -452 | + | 4.64 | CTCATATAAATATATG
 |  | Oasl1 | -447 | -431 | + | 6.28 | [NAME]
 |  | Pion | -453 | -437 | + | 4.93 | GAAAGGTAAAGAGAAC
 |  | Polr2f | -436 | -420 | - | 3.48 | TGCTTGCTTACGGCAG
 |  | Rsbn1 | -469 | -453 | + | 6.94 | TCTGAGTAAACACCAT
 |  | Slc25a37 | -468 | -452 | - | 3.77 | TGAGTGTTAACTGTTC
 |  | Ttc39c | -461 | -445 | - | 4.62 | CATATATTTATGTTAT
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
12 | V$NFKB_Q6 | NF-kappaB | 14.4942688614 | 0.56043956961 | - 126 : 5 | 2.29146124035e-05
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | A430033K04Rik | 2 | 16 | + | 6.46 | CTGGGACCCTCCAT
 |  | Zfp945 | -11 | 3 | - | 11.15 | CAGGAAATTCCACC
 |  | [NAME] | -93 | -79 | + | 8.07 | TGTGGAAACTCCCC
 |  | [NAME] | -62 | -48 | + | 4.97 | GGGGGCACTTCCTC
 |  | Gm10062 | -48 | -34 | - | 4.69 | AAGGTGAGTTCCAG
 |  | Lztfl1 | -113 | -99 | + | 4.58 | GTGGGACTTCCGGA
 |  | Nfkb2 | -41 | -27 | + | 6.53 | ACGGGAATTCCCCC
 |  | Nfkb2 | -13 | 1 | + | 5.48 | AAGGGGCTTTCCCG
 |  | Nfkbia | -32 | -18 | + | 6.93 | CTTGGAAATTCCCC
 |  | Oasl1 | -15 | -1 | + | 8.39 | AGGGGACCCCCCCA
 |  | Relb | -99 | -85 | - | 5.93 | CGGGGGTTTTCCCA
 |  | Relb | -25 | -11 | + | 4.76 | CGGGGAATTCCGCC
 |  | Sgms2 | -45 | -31 | + | 4.75 | ATTGGATGTTCTTC
 |  | Tnfrsf4 | -126 | -112 | + | 4.07 | ATGGGACTCTGCAT
 |  | Tnfrsf4 | -13 | 1 | - | 5.09 | AAGGAAAAACCCCA
 |  | Cxcl10 | -105 | -91 | + | 12.04 | AGGGGACTTCCCTC
 |  | Cxcl10 | -38 | -24 | + | 5.65 | GAGGGAAACTCTTT
 |  | Rnd1 | -96 | -82 | + | 4.17 | AGGGGATCCCACCT
 |  | Il6 | -93 | -79 | + | 10.11 | GTGGGATTTTCCCA
 |  | [NAME] | -113 | -99 | + | 4.87 | AAGGCAATTTCCAA
 |  | Trim26 | -97 | -83 | + | 5.45 | TGGGGATTTGCCCA
 |  | Ifitm3 | -118 | -104 | - | 9.99 | CTGGAAGTTCCCCT
 |  | Ifitm3 | 5 | 19 | + | 4.11 | AAGGAAACTTCTGA
 |  | Ccl7 | -57 | -43 | - | 5.08 | AAAGAAGATCCCTC
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
13 | V$CETS1P54_02 | c-Ets-1(p54) | 8.90987311199 | 0.466045347544 | - 83 : 80 | 4.0794965925e-05
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 9030425E11Rik | 40 | 53 | - | 6.36 | TTTTTTCCTCTTT
 |  | Zfp945 | -77 | -64 | + | 7.07 | TAACCGGAAGTGG
 |  | Zfp945 | -14 | -1 | + | 7.35 | TGACAGGAAATTC
 |  | Zfp945 | 80 | 93 | - | 7.2 | AAACTTCCTTAAG
 |  | Adhfe1 | 10 | 23 | - | 6.29 | GAGTTTCCTGAGA
 |  | Cabyr | 46 | 59 | + | 6.44 | AAAGAGGAAGCTC
 |  | [NAME] | -58 | -45 | - | 6.8 | [NAME]
 |  | Ddx47 | 6 | 19 | - | 7.32 | CCACTTCCGGAGC
 |  | Dhx38 | 12 | 25 | + | 6.32 | ACAGCGGAATTTG
 |  | Lztfl1 | -83 | -70 | + | 6.73 | CCCGCGGAAATTA
 |  | Lztfl1 | 70 | 83 | - | 6.68 | CTGTTTCCTGTCG
 |  | Nif3l1 | -37 | -24 | + | 6.56 | GAAAAGGATAAAA
 |  | Nif3l1 | 21 | 34 | + | 6.34 | GGAACGGAAAAGC
 |  | Polr2f | -46 | -33 | + | 6.22 | TTCCCGGAAGTAA
 |  | Rsbn1 | 23 | 36 | + | 6.8 | ACACTGGAAGTGG
 |  | Sgms2 | -71 | -58 | - | 6.86 | [NAME]
 |  | Tnfaip3 | 40 | 53 | - | 6.85 | GCATTTCCAGTTC
 |  | Trim13 | 56 | 69 | - | 7.07 | GATCATCCTTTGC
 |  | Ttc39c | -70 | -57 | + | 7.04 | CAAGAGGAAGTAC
 |  | Ttc39c | -29 | -16 | - | 7.79 | CTACTTCCTGTAT
 |  | Usf1 | -55 | -42 | + | 6.6 | CGAGCGGAAGTGT
 |  | Zfp830 | -34 | -21 | + | 7.19 | TAACAGGAAGTGA
 |  | Zfp830 | 75 | 88 | + | 6.61 | AATCAGGAAGAAC
 |  | Cxcl10 | 49 | 62 | + | 6.21 | CTTCCGGAAGCCT
 |  | Ifit1 | 1 | 14 | - | 6.89 | GAGCTTCCAGTTG
 |  | Samd9l | 32 | 45 | + | 6.44 | AAACTGGAAACTG
 |  | Ifitm3 | 2 | 15 | + | 6.83 | GAAAAGGAAACTT
 |  | Tor1aip2 | -42 | -29 | + | 6.85 | AAAAAGGAAATGG
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
14 | V$CREL_01 | [NAME] | 10.832241902 | 0.558823538572 | -179:-9 | 4.31259207558e-05
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | Zfp945 | -9 | 1 | - | 9.01 | GGAAATTCCA
 |  | Adhfe1 | -28 | -18 | - | 6.91 | GAAAAACCCA
 |  | Cabyr | -179 | -169 | + | 7.15 | TGGGCCTTCC
 |  | [NAME] | -90 | -80 | - | 9.01 | GGAAACTCCC
 |  | [NAME] | -60 | -50 | + | 5.86 | GGGCACTTCC
 |  | Fam126a | -179 | -169 | + | 7.15 | TGGGCGTTCC
 |  | Fam132a | -13 | -3 | - | 5.86 | GGAAGTGCCC
 |  | Gtse1 | -136 | -126 | + | 7.43 | GGGAACTTCC
 |  | Gtse1 | -123 | -113 | + | 9.01 | GGGAGTTTCC
 |  | Lztfl1 | -177 | -167 | + | 6.55 | CGGAAATTTC
 |  | Lztfl1 | -112 | -102 | + | 7.33 | TGGGACTTCC
 |  | Nfkb2 | -40 | -30 | + | 9.13 | CGGGAATTCC
 |  | Nfkb2 | -11 | -1 | + | 10.1 | GGGGCTTTCC
 |  | Nfkbia | -30 | -20 | + | 8.32 | TGGAAATTCC
 |  | [NAME] | -122 | -112 | + | 8.91 | GGGGGATTCC
 |  | Relb | -98 | -88 | + | 7.6 | GGGGGTTTTC
 |  | Relb | -24 | -14 | + | 9.59 | [NAME]
 |  | Suv39h2 | -115 | -105 | - | 7.84 | GGAAGGCCCC
 |  | Tnfrsf4 | -11 | -1 | - | 8.11 | GGAAAAACCC
 |  | Cxcl10 | -159 | -149 | + | 9.01 | GGGAAATTCC
 |  | Cxcl10 | -104 | -94 | + | 8.02 | GGGGACTTCC
 |  | Il6 | -92 | -82 | + | 7.6 | TGGGATTTTC
 |  | Irf1 | -14 | -4 | + | 5.71 | CGGGGAATCC
 |  | Samd9l | -68 | -58 | + | 6.11 | GGGTTTTACC
 |  | Ifitm3 | -117 | -107 | + | 6.74 | TGGAAGTTCC
 |  | Ccl2 | -146 | -136 | - | 8.11 | GGAAACACCC
 |  | Ccl7 | -178 | -168 | - | 6.06 | GGAATAGCCA
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
15 | V$NFY_C | NF-Y | 19.0425781706 | 0.424078402775 | -96:-7 | 4.98924901791e-05
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 9930104L06Rik | -55 | -41 | - | 0.17 | GCCAGCCAATCCTC
 |  | A430033K04Rik | -91 | -77 | - | 7.25 | TCTGTCCAATCAGA
 |  | A430033K04Rik | -61 | -47 | - | 2.65 | CGTGCCCAATCAGA
 |  | Adhfe1 | -83 | -69 | + | 6.35 | TTTGGTTGGTCAGT
 |  | Adhfe1 | -11 | 3 | - | 0.49 | TCTTGCCATTGAGA
 |  | Arl6ip1 | -33 | -19 | - | 2.64 | TCTACCCAATGAGG
 |  | Ercc8 | -32 | -18 | + | 11.79 | [NAME]
 |  | Fam126a | -61 | -47 | + | 5.06 | AGTGATAGGCTGAT
 |  | Fam126a | -32 | -18 | + | 4.78 | GGTGGTTGGCTGCT
 |  | Fam132a | -10 | 4 | - | 1.66 | AGTGCCCAATGAGT
 |  | Gtse1 | -7 | 7 | - | 0.44 | ACAGGCCAATCGGC
 |  | Lztfl1 | -74 | -60 | - | 0.64 | ATTAGCCAGTTACG
 |  | Mylip | -71 | -57 | + | 0.33 | TGTGATTGGCGGAG
 |  | Nfkb2 | -86 | -72 | - | 5.26 | TTCAACCAATAAAA
 |  | Plat | -19 | -5 | + | 0.67 | TCAAATTGGCTGGA
 |  | Sgms2 | -49 | -35 | + | 1.18 | AGTGATTGGATGTT
 |  | Cxcl10 | -59 | -45 | - | 11.89 | GTCAGCCAATCAGG
 |  | Stat2 | -96 | -82 | - | 6.2 | TTCAGCCAATGAGA
 |  | Samd9l | -64 | -50 | - | 1.58 | TTTACCCAAACAAA
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
16 | V$IRF1_01 | IRF-1 | 19.1479042987 | 0.37954823172 | -214:-119 | 7.33132874507e-05
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 9930104L06Rik | -123 | -110 | + | 0.43 | CAATAGCAAATCG
 |  | Zfp945 | -154 | -141 | + | 3.86 | GCAAAACAAAACC
 |  | Zfp945 | -122 | -109 | + | 1.44 | TTAAAGTAAAACA
 |  | Arl6ip1 | -119 | -106 | - | 4.44 | TCTTTCAGTTTCG
 |  | Birc2 | -208 | -195 | - | 4.94 | TGTGTCATTTTTA
 |  | Birc3 | -207 | -194 | + | 2.3 | TAAAAACAAAAAG
 |  | [NAME] | -158 | -145 | - | 8.61 | GATTTCAGTTTTC
 |  | Fam132a | -193 | -180 | + | 1.1 | CTAAATAGAAACC
 |  | Nfkb1 | -213 | -200 | - | 2.18 | AGATTGACTTTTG
 |  | Nif3l1 | -191 | -178 | - | 1.9 | TGTTTTGTTTTTT
 |  | Oasl1 | -179 | -166 | - | 1.84 | [NAME]
 |  | Oasl1 | -158 | -145 | + | 8.77 | CAAAAGAGAAACT
 |  | Oasl1 | -136 | -123 | + | 5.99 | GAGAATCGAAACT
 |  | Plat | -178 | -165 | + | 3.18 | GAATAATCAAACT
 |  | Rsbn1 | -168 | -155 | - | 1.93 | TTTTTTTCTTTTC
 |  | Rsbn1 | -133 | -120 | + | 2.85 | CTACAGCGAAACC
 |  | Thop1 | -165 | -152 | - | 2.36 | GGTGTTAGGTTTC
 |  | Usf1 | -187 | -174 | - | 4.6 | GGTTTTTTTTTTC
 |  | Cxcl10 | -214 | -201 | + | 8.53 | GGAAAGTGAAACT
 |  | Cxcl10 | -188 | -175 | + | 1.15 | AAAAATTAAAAGG
 |  | [NAME] | -207 | -194 | - | 1.26 | GTTTATGTTTTTC
 |  | Trim26 | -150 | -137 | - | 3.7 | GATTTCACTTTCC
 |  | Vcam1 | -166 | -153 | - | 1.15 | ATTTTTATTTTTT
 |  | Ccl2 | -167 | -154 | - | 3.22 | AGTTTCTCTCTTC
 |  | Tor1aip2 | -140 | -127 | + | 3.95 | AAAAAACGAAAGA
Results for Cluster 2:
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
1 | V$GC_01 | GC box | 11.5380830882 | 0.682481751374 | -117:-9 | 1.16505519087e-14
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 2310035C23Rik | -115 | -101 | + | 10.3 | TGTGGGCGGGGTCT
 |  | 2310035C23Rik | -51 | -37 | + | 9.79 | GGTGGGTGGGGCTG
 |  | 2310035C23Rik | -34 | -20 | + | 6.24 | CGGGGACGGGGCGG
 |  | Bcl2l13 | -55 | -41 | - | 10.43 | GGGCCCCGCCCCTA
 |  | Cdkn1a | -18 | -4 | + | 10.1 | AAGAGGTGGGGCTG
 |  | Chmp2a | -115 | -101 | + | 5.92 | CTTGGGTGGGACCT
 |  | Chmp2a | -12 | 2 | + | 7.87 | AGAGGGTGGGTCGT
 |  | Cdk12 | -94 | -80 | + | 9.14 | TAGGGGAAGGGCCT
 |  | Foxo3 | -47 | -33 | - | 7.14 | GGCCCCCGCCCCAG
 |  | Foxo3 | -18 | -4 | - | 7.31 | GGGACCCGCCCCGC
 |  | Ggps1 | -105 | -91 | - | 5.88 | CCGCAATGCCCACT
 |  | Ggps1 | -61 | -47 | + | 6.07 | AGGAGGCGCGGCCA
 |  | Ggps1 | -40 | -26 | + | 5.82 | GAGGGGAGGTGGCA
 |  | Gspt2 | -71 | -57 | + | 6.26 | CAGGGGTGGAGGAG
 |  | Gtf3c1 | -72 | -58 | + | 5.75 | TGGAGGAGGAACTC
 |  | Gtf3c1 | -51 | -37 | - | 6.04 | TGAGCCCGCCCTCG
 |  | Hbs1l | -103 | -89 | + | 9.02 | TGTGGGCGGGACCT
 |  | [NAME] | -48 | -34 | + | 6.79 | CGGAGGAGGAGGCG
 |  | [NAME] | -17 | -3 | + | 7.01 | AGGGGGAGGGAGGG
 |  | Kin | -63 | -49 | - | 9.06 | TGGCCCCACCCATT
 |  | [NAME] | -90 | -76 | - | 9.54 | CGGCTCCGCCCCGC
 |  | Lat2 | -54 | -40 | - | 7.99 | CTGCTCCACCCACT
 |  | Maml1 | -105 | -91 | - | 6.68 | CCCCCACGCCCTCG
 |  | Maml1 | -24 | -10 | - | 11.09 | AGGCCCCGCCCTCT
 |  | Med4 | -51 | -37 | - | 8.57 | CGGTTCCGCCCCTC
 |  | Mettl2 | -75 | -61 | - | 6.49 | GGAACCCGCCCCGC
 |  | Mettl2 | -60 | -46 | - | 9.81 | CCGCCCCGCCCCGC
 |  | Mettl2 | -45 | -31 | - | 9.81 | CCGCCCCGCCCCGC
 |  | Mettl6 | -27 | -13 | + | 7.87 | TTGGGGAGGGACTT
 |  | Mknk2 | -104 | -90 | - | 10.62 | AAGCTCCGCCTCCT
 |  | Mknk2 | -59 | -45 | + | 8.19 | GAGGGGCGGGGTAA
 |  | Mrpl38 | -52 | -38 | + | 9.81 | GCGGGGCGGGGCGG
 |  | Mrpl38 | -37 | -23 | + | 6.78 | GCGGGGCGGGGGGC
 |  | Mrpl38 | -13 | 1 | + | 10.32 | ACGGGGCGGGGCTA
 |  | Pdhx | -106 | -92 | + | 6.79 | GGTGGGCGTGCCCG
 |  | Pdhx | -85 | -71 | + | 7.5 | TGGAGGCGGTGTTA
 |  | Pdhx | -32 | -18 | + | 10.2 | TGTGGGCGGGGCCA
 |  | Pdhx | -12 | 2 | + | 8 | GCAAGGCGGGGCCT
 |  | Polr2d | -103 | -89 | - | 10.27 | TGGCCCCGCCCATT
 |  | Polr2d | -85 | -71 | - | 9.25 | TGGCCCCGCCTCCG
 |  | Ptpn4 | -113 | -99 | - | 7.74 | GAGCCACGCCCTCC
 |  | Rapgef6 | -117 | -103 | + | 7.31 | CCGAGGCGGAGTCT
 |  | [NAME] | -104 | -90 | - | 5.82 | GGGCCACACCTTCT
 |  | Rnf169 | -36 | -22 | - | 9.73 | CTGCCCCGCCCTCT
 |  | Rnf40 | -49 | -35 | + | 7.43 | GAGGGGTGGGACTA
 |  | Rsf1 | -41 | -27 | - | 6.01 | CAACTCCTCCCGCC
 |  | Rsf1 | -20 | -6 | - | 7 | CCCCTCCTCCTCCA
 |  | Rspry1 | -31 | -17 | + | 7.1 | AAGGGGCGTTTCCT
 |  | Rspry1 | -10 | 4 | + | 7.42 | TGAGGGAGGGCCCG
 |  | [NAME] | -82 | -68 | - | 6.03 | TCGCCCTACCCCGC
 |  | [NAME] | -28 | -14 | + | 6.76 | AGAGGGCAGTGTCT
 |  | [NAME] | -9 | 5 | + | 9.45 | AGAGGGCGGTGCTT
 |  | Sesn2 | -91 | -77 | + | 6.57 | GGAGGGAGGTGTCG
 |  | Sesn2 | -20 | -6 | - | 6.5 | CCCGCCCTCCCCCA
 |  | Sin3b | -90 | -76 | - | 6.76 | TGGACACTCCCCTA
 |  | Sin3b | -50 | -36 | + | 9.67 | AGGAGGCGGGGCCC
 |  | Sin3b | -12 | 2 | + | 8.81 | CGGAGGCGGGGCAG
 |  | Slc19a2 | -109 | -95 | + | 7.88 | GTGGGGCGTGGCCA
 |  | Slc19a2 | -93 | -79 | + | 6.42 | CGGAGGCGGGCCAG
 |  | Slc19a2 | -76 | -62 | + | 6.61 | GGGAGGCGGACCTA
 |  | Slc19a2 | -43 | -29 | + | 10.22 | TCGGGGCGGGGCGT
 |  | [NAME] | -99 | -85 | - | 5.95 | CACACACACCCCTC
 |  | Tob1 | -110 | -96 | + | 8.66 | GGAGGGCGGGACTG
 |  | Tob1 | -65 | -51 | + | 6.07 | TGGGGGCGGGGAGG
 |  | Tob1 | -39 | -25 | + | 8.33 | GAGAGGCGGGGCGC
 |  | Tra2a | -75 | -61 | + | 7.78 | CCGGGGCGGAGGCG
 |  | Tra2a | -40 | -26 | - | 9.28 | CAGGTCCGCCCCTT
 |  | Upk1a | -82 | -68 | - | 7.29 | AACTCCTGCCCCCT
 |  | Upk1a | -51 | -37 | + | 6.83 | TCAAGGAGGGGTTT
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
2 | V$SP1_01 | Sp1 | 8.90287601109 | 0.718181824684 | - 150 : 10 | 3.70283653222e-14
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 2310035C23Rik | -113 | -103 | + | 8.75 | TGGGCGGGGT
 |  | 2310035C23Rik | -38 | -28 | + | 8.46 | GAGGCGGGGA
 |  | 2310035C23Rik | -27 | -17 | + | 8.75 | GGGGCGGGGC
 |  | Bcl2l13 | -53 | -43 | - | 8.75 | GCCCCGCCCC
 |  | Car15 | -129 | -119 | - | 6.53 | GCCATGCCTC
 |  | Ccng1 | -75 | -65 | + | 6.14 | CGGGCGTGGC
 |  | Ccnk | -150 | -140 | + | 6.13 | TGGGCTTGGA
 |  | Cdkn1a | -80 | -70 | + | 6 | TGGGTGGGGA
 |  | Cdkn1a | -16 | -6 | + | 6 | GAGGTGGGGC
 |  | Chmp2a | -123 | -113 | + | 6.81 | GAGGCTGGCT
 |  | Chmp2a | -11 | -1 | + | 6.68 | GAGGGTGGGT
 |  | Foxo3 | -34 | -24 | - | 6.68 | GCCCTCCCCC
 |  | Foxo3 | -24 | -14 | + | 8.06 | TGGGCGGGGA
 |  | Ggps1 | -59 | -49 | + | 6.14 | GAGGCGCGGC
 |  | Gspt2 | -149 | -139 | - | 6 | ACTCAGCCTC
 |  | Gtf3c1 | -49 | -39 | - | 7.5 | AGCCCGCCCT
 |  | Hbs1l | -88 | -78 | - | 7.37 | GCCCCCCCCC
 |  | [NAME] | -146 | -136 | + | 7.66 | TGGGCGGGGC
 |  | [NAME] | -107 | -97 | + | 6.13 | AGGGCTTGGA
 |  | [NAME] | -16 | -6 | + | 7.08 | GGGGGAGGGA
 |  | [NAME] | -88 | -78 | - | 6.69 | GCTCCGCCCC
 |  | Lat2 | -104 | -94 | - | 7.22 | ACCATGCCCA
 |  | Maml1 | -22 | -12 | - | 7.66 | GCCCCGCCCT
 |  | Mettl2 | -73 | -63 | - | 7.91 | AACCCGCCCC
 |  | Mettl2 | -63 | -53 | - | 8.75 | GCCCCGCCCC
 |  | Mettl2 | -53 | -43 | - | 8.75 | GCCCCGCCCC
 |  | Mettl2 | -43 | -33 | - | 8.75 | GCCCCGCCCC
 |  | Mettl2 | -33 | -23 | - | 7.66 | GCCCCGCCCT
 |  | Mettl2 | 10 | 20 | + | 7.9 | GGGGCGTGGC
 |  | Mettl6 | -109 | -99 | - | 6.14 | TCCGCGCCCA
 |  | Mettl6 | -26 | -16 | + | 5.99 | TGGGGAGGGA
 |  | Mettl6 | 10 | 20 | + | 6.68 | GGGGCAGTGC
 |  | Mknk2 | -102 | -92 | - | 6 | GCTCCGCCTC
 |  | Mknk2 | -57 | -47 | + | 9.84 | GGGGCGGGGT
 |  | Mknk2 | -38 | -28 | - | 6.14 | ACCGCGCCTA
 |  | Mrpl38 | -50 | -40 | + | 8.75 | GGGGCGGGGC
 |  | Mrpl38 | -40 | -30 | + | 8.75 | GGGGCGGGGC
 |  | Mrpl38 | -28 | -18 | + | 9.84 | GGGGCGGGGT
 |  | Mrpl38 | -11 | -1 | + | 8.75 | GGGGCGGGGC
 |  | Mrpl38 | 3 | 13 | + | 6 | GAGGCGGAGC
 |  | Mrps7 | -147 | -137 | + | 6.13 | GAGGCAGGCC
 |  | Mrps7 | 6 | 16 | + | 8.75 | GGGGCGGGGC
 |  | Pdhx | -83 | -73 | + | 7.77 | GAGGCGGTGT
 |  | Pdhx | -50 | -40 | + | 7.37 | AAGGCGGGGA
 |  | Pdhx | -30 | -20 | + | 7.66 | TGGGCGGGGC
 |  | Pdhx | -10 | 0 | + | 6.97 | AAGGCGGGGC
 |  | Polk | -125 | -115 | + | 6 | GAGGCGGAGC
 |  | Polr2d | -124 | -114 | - | 6 | TCTCCGCCCT
 |  | Polr2d | -101 | -91 | - | 7.66 | GCCCCGCCCA
 |  | Polr2d | -83 | -73 | - | 8.06 | GCCCCGCCTC
 |  | Ptpn4 | -127 | -117 | + | 6.25 | GGGGTGTGGA
 |  | Ptpn4 | -111 | -101 | - | 6.81 | GCCACGCCCT
 |  | Ptpn4 | -14 | -4 | + | 6.54 | GAGGCGGGAA
 |  | Ptpn4 | -3 | 7 | + | 6 | GAGGCGGAGC
 |  | Ptpn4 | 9 | 19 | + | 6.81 | AGGGCGTGGC
 |  | Rapgef6 | -115 | -105 | + | 7.09 | GAGGCGGAGT
 |  | Rapgef6 | -78 | -68 | - | 7.09 | TCTCCGCCCC
 |  | Rapgef6 | -67 | -57 | - | 7.22 | TCCACGCCCA
 |  | Rnf169 | -79 | -69 | - | 7.22 | TTCCCGCCCC
 |  | Rnf169 | -39 | -29 | - | 6.68 | GCACTGCCCC
 |  | Rnf40 | -146 | -136 | - | 6.24 | TCCACCCCTC
 |  | Rsf1 | -64 | -54 | - | 6.29 | ACCCTGCCAT
 |  | Rspry1 | -9 | 1 | + | 5.99 | GAGGGAGGGC
 |  | Rspry1 | 2 | 12 | + | 6.69 | CGGGCGGTGT
 |  | [NAME] | -90 | -80 | - | 5.98 | AGCGCGCCTC
 |  | [NAME] | -80 | -70 | - | 6 | GCCCTACCCC
 |  | [NAME] | -26 | -16 | + | 6.68 | AGGGCAGTGT
 |  | [NAME] | -7 | 3 | + | 6.28 | AGGGCGGTGC
 |  | Sesn2 | -77 | -67 | - | 6 | GCTCCGCCTC
 |  | Sesn2 | -22 | -12 | - | 8.06 | TCCCCGCCCT
 |  | Sin3b | -48 | -38 | + | 8.06 | GAGGCGGGGC
 |  | Sin3b | -10 | 0 | + | 8.06 | GAGGCGGGGC
 |  | Skiv2l2 | -142 | -132 | + | 6.14 | GGGGCAGGAC
 |  | Slc19a2 | -149 | -139 | + | 7.9 | GGGGCGTGGC
 |  | Slc19a2 | -119 | -109 | + | 6.81 | TGGGCGTGGC
 |  | Slc19a2 | -107 | -97 | + | 7.9 | GGGGCGTGGC
 |  | Slc19a2 | -91 | -81 | + | 6.81 | GAGGCGGGCC
 |  | Slc19a2 | -41 | -31 | + | 8.75 | GGGGCGGGGC
 |  | Slc19a2 | -28 | -18 | + | 8.75 | GGGGCGGGGC
 |  | Slc19a2 | -18 | -8 | + | 7.38 | CAGGCGGGGT
 |  | Tob1 | -146 | -136 | + | 7.78 | GGGGCGGAGT
 |  | Tob1 | -63 | -53 | + | 9.15 | GGGGCGGGGA
 |  | Tob1 | -37 | -27 | + | 8.06 | GAGGCGGGGC
 |  | Tra2a | -67 | -57 | + | 9.15 | GAGGCGGGGT
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
3 | V$SP1_Q6 | Sp1 | 11.6644098901 | 0.789173803608 | -104:-9 | 5.02152022942e-13
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 2310035C23Rik | -51 | -38 | + | 8.77 | GGTGGGTGGGGCT
 |  | 2310035C23Rik | -35 | -22 | + | 6.2 | GCGGGGACGGGGC
 |  | Bcl2l13 | -54 | -41 | - | 11.15 | GGCCCCGCCCCTA
 |  | Ccng1 | -77 | -64 | + | 5.9 | GTCGGGCGTGGCT
 |  | Cdkn1a | -18 | -5 | + | 7.42 | AAGAGGTGGGGCT
 |  | Chmp2a | -12 | 1 | + | 6.5 | AGAGGGTGGGTCG
 |  | Cdk12 | -94 | -81 | + | 5.94 | TAGGGGAAGGGCC
 |  | Foxo3 | -53 | -40 | - | 6.09 | CCTCCCGGCCCCC
 |  | Foxo3 | -40 | -27 | - | 6.29 | GCCCCAGCCCTCC
 |  | Foxo3 | -26 | -13 | + | 6.97 | CCTGGGCGGGGAC
 |  | Foxo3 | -12 | 1 | - | 5.99 | CGCCCCGCCGTCA
 |  | Ggps1 | -73 | -60 | + | 5.98 | GAGGGGAGGGGAA
 |  | Ggps1 | -40 | -27 | + | 6.82 | GAGGGGAGGTGGC
 |  | Gspt2 | -39 | -26 | + | 6.07 | TGGGGGAGGAGAT
 |  | Gtf3c1 | -72 | -59 | + | 5.82 | TGGAGGAGGAACT
 |  | Gtf3c1 | -50 | -37 | - | 7.93 | GAGCCCGCCCTCG
 |  | Hbs1l | -103 | -90 | + | 9.34 | TGTGGGCGGGACC
 |  | Hbs1l | -89 | -76 | - | 6.63 | CGCCCCCCCCCCC
 |  | [NAME] | -48 | -35 | + | 6.74 | CGGAGGAGGAGGC
 |  | [NAME] | -17 | -4 | + | 8.42 | AGGGGGAGGGAGG
 |  | Kin | -62 | -49 | - | 8.23 | GGCCCCACCCATT
 |  | Kin | -33 | -20 | - | 6.78 | GGTCCCGCCTGTC
 |  | [NAME] | -89 | -76 | - | 10.24 | GGCTCCGCCCCGC
 |  | Lat2 | -53 | -40 | - | 6.33 | TGCTCCACCCACT
 |  | Maml1 | -104 | -91 | - | 6.85 | CCCCACGCCCTCG
 |  | Maml1 | -23 | -10 | - | 10.93 | GGCCCCGCCCTCT
 |  | Med4 | -50 | -37 | - | 8.99 | GGTTCCGCCCCTC
 |  | Mettl2 | -74 | -61 | - | 8.83 | GAACCCGCCCCGC
 |  | Mettl2 | -59 | -46 | - | 11.3 | CGCCCCGCCCCGC
 |  | Mettl2 | -44 | -31 | - | 11.3 | CGCCCCGCCCCGC
 |  | Mettl6 | -27 | -14 | + | 6.82 | TTGGGGAGGGACT
 |  | Mknk2 | -103 | -90 | - | 9.14 | AGCTCCGCCTCCT
 |  | Mknk2 | -59 | -46 | + | 9.6 | GAGGGGCGGGGTA
 |  | Mrpl38 | -52 | -39 | + | 11.3 | GCGGGGCGGGGCG
 |  | Mrpl38 | -37 | -24 | + | 10.34 | GCGGGGCGGGGGG
 |  | Mrpl38 | -13 | 0 | + | 11.04 | ACGGGGCGGGGCT
 |  | Mrps7 | -74 | -61 | - | 6.51 | CCTTCCGCCTCCG
 |  | Pdhx | -85 | -72 | + | 6.82 | TGGAGGCGGTGTT
 |  | Pdhx | -32 | -19 | + | 10.77 | TGTGGGCGGGGCC
 |  | Pdhx | -12 | 1 | + | 8.36 | GCAAGGCGGGGCC
 |  | Polr2d | -102 | -89 | - | 10.39 | GGCCCCGCCCATT
 |  | Polr2d | -84 | -71 | - | 10.39 | GGCCCCGCCTCCG
 |  | Polr2d | -45 | -32 | - | 5.77 | GAGCCCACCCTCG
 |  | Ptpn4 | -16 | -3 | + | 6.33 | AGGAGGCGGGAAG
 |  | Rapgef6 | -79 | -66 | - | 6.88 | TTCTCCGCCCCCT
 |  | Rnf169 | -80 | -67 | - | 8.19 | GTTCCCGCCCCCT
 |  | Rnf169 | -35 | -22 | - | 9.46 | TGCCCCGCCCTCT
 |  | Rnf40 | -49 | -36 | + | 7.72 | GAGGGGTGGGACT
 |  | Rnf40 | -27 | -14 | + | 5.92 | GAGAGGAGGAACC
 |  | Rsf1 | -40 | -27 | - | 6.96 | AACTCCTCCCGCC
 |  | Rsf1 | -22 | -9 | - | 6.17 | ATCCCCTCCTCCT
 |  | Rspry1 | -10 | 3 | + | 7.09 | TGAGGGAGGGCCC
 |  | [NAME] | -76 | -63 | - | 8.92 | [NAME]
 |  | [NAME] | -9 | 4 | + | 8.04 | AGAGGGCGGTGCT
 |  | Sesn2 | -91 | -78 | + | 6.46 | GGAGGGAGGTGTC
 |  | Sesn2 | -78 | -65 | - | 9.62 | GGCTCCGCCTCCC
 |  | Sesn2 | -23 | -10 | - | 8.19 | [NAME]
 |  | Sin3b | -63 | -50 | - | 6.19 | GTCTCCACCCCCT
 |  | Sin3b | -50 | -37 | + | 10.81 | AGGAGGCGGGGCC
 |  | Sin3b | -12 | 1 | + | 8.93 | CGGAGGCGGGGCA
 |  | Slc19a2 | -99 | -86 | + | 5.8 | GCCAGGCGGAGGC
 |  | Slc19a2 | -76 | -63 | + | 7.28 | GGGAGGCGGACCT
 |  | Slc19a2 | -43 | -30 | + | 10.75 | TCGGGGCGGGGCG
 |  | Slc19a2 | -30 | -17 | + | 11.99 | TGGGGGCGGGGCC
 |  | [NAME] | -93 | -80 | - | 8.62 | CACCCCTCCTCCC
 |  | Tob1 | -65 | -52 | + | 8.94 | TGGGGGCGGGGAG
 |  | Tob1 | -39 | -26 | + | 9.84 | GAGAGGCGGGGCG
 |  | Tra2a | -75 | -62 | + | 8.78 | CCGGGGCGGAGGC
 |  | Tra2a | -39 | -26 | - | 7.99 | AGGTCCGCCCCTT
 |  | Upk1a | -81 | -68 | - | 5.9 | ACTCCTGCCCCCT
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
4 | V$CREB_01 | CREB | 12.4601550545 | 0.474137931131 | - 74 : 7 | 3.17919383957e-10
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | Bcl2l13 | -33 | -25 | + | 8.05 | TGACGTAG
 |  | Bcl2l13 | -14 | -6 | + | 6.5 | TGACCTCA
 |  | C130022K22Rik | -36 | -28 | + | 6.25 | TGACGCAA
 |  | Chmp2a | 3 | 11 | + | 9.76 | TGACGTCA
 |  | Coq5 | -18 | -10 | - | 5.1 | CGCCGTCA
 |  | Coq5 | -1 | 7 | + | 6.25 | TGACGCAA
 |  | Foxo3 | -7 | 1 | - | 5.1 | CGCCGTCA
 |  | Gtf3c1 | -30 | -22 | + | 9.76 | TGACGTCA
 |  | Hbs1l | 7 | 15 | + | 8.33 | TGACGTCG
 |  | [NAME] | 3 | 11 | - | 5.1 | CGGCGTCA
 |  | Maml1 | -45 | -37 | + | 4.82 | TGACGCAG
 |  | Mrpl38 | -73 | -65 | + | 6.5 | TTACGTCA
 |  | Rapgef6 | -52 | -44 | - | 8.05 | CTACGTCA
 |  | Sin3b | -74 | -66 | + | 6.54 | TGACGCCA
 |  | Skiv2l2 | -48 | -40 | - | 5.1 | CGGCGTCA
 |  | Tra2a | -51 | -43 | - | 8.33 | CGACGTCA
 |  | Tra2a | -27 | -19 | + | 9.76 | TGACGTCA
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
5 | V$CREB_Q4 | CREB | 13.0218214916 | 0.562499997516 | - 98 : 5 | 3.48900391376e-09
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | Bcl2l13 | -35 | -23 | + | 10.06 | CGTGACGTAGGC
 |  | Bcl2l13 | -16 | -4 | + | 5.29 | GGTGACCTCACC
 |  | C130022K22Rik | -38 | -26 | + | 5.76 | AATGACGCAAAC
 |  | Chmp2a | 1 | 13 | + | 10.5 | TGTGACGTCAGG
 |  | Coq5 | -3 | 9 | + | 10.44 | GGTGACGCAACC
 |  | Gtf3c1 | -32 | -20 | + | 10.68 | CGTGACGTCACG
 |  | Hbs1l | 5 | 17 | + | 6.9 | TATGACGTCGCG
 |  | [NAME] | 1 | 13 | - | 6.46 | GGCGGCGTCAAG
 |  | Maml1 | -47 | -35 | + | 6.47 | AGTGACGCAGAG
 |  | Mettl2 | -9 | 3 | + | 6.13 | AGTGACGCTACT
 |  | Mrpl38 | -75 | -63 | - | 10.45 | CATTACGTCAGG
 |  | Rapgef6 | -54 | -42 | - | 8.58 | CTCTACGTCACG
 |  | Rspry1 | -89 | -77 | + | 4.82 | CGTGACACAAAT
 |  | Sin3b | -76 | -64 | + | 7.12 | TTTGACGCCACG
 |  | Skiv2l2 | -50 | -38 | - | 5.56 | TTCGGCGTCACT
 |  | Tob1 | -98 | -86 | + | 4.8 | TGTGACGCGAGC
 |  | Tra2a | -53 | -41 | - | 7.64 | GACGACGTCATC
 |  | Tra2a | -29 | -17 | + | 8.33 | CTTGACGTCAGG
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
6 | V$CREBP1_Q2 | CRE-BP1 | 15.1176695307 | 0.547619056134 | - 76 : 13 | 1.76594499308e-08
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | Bcl2l13 | -35 | -23 | + | 9.61 | CGTGACGTAGGC
 |  | Bcl2l13 | -16 | -4 | + | 6.01 | GGTGACCTCACC
 |  | Chmp2a | 1 | 13 | + | 5.48 | TGTGACGTCAGG
 |  | Coq5 | -20 | -8 | - | 3.88 | [NAME]
 |  | Coq5 | -3 | 9 | + | 10.52 | GGTGACGCAACC
 |  | Gtf3c1 | -32 | -20 | + | 10.92 | CGTGACGTCACG
 |  | [NAME] | 1 | 13 | - | 6.86 | GGCGGCGTCAAG
 |  | Maml1 | -47 | -35 | + | 6.46 | AGTGACGCAGAG
 |  | Mettl2 | -9 | 3 | + | 5.08 | AGTGACGCTACT
 |  | Mrpl38 | -75 | -63 | - | 5.08 | CATTACGTCAGG
 |  | Ptpn4 | 13 | 25 | - | 3.55 | CGTGGCTTCACC
 |  | Rai12 | -21 | -9 | - | 3.55 | TCTGACTTCAGG
 |  | Rapgef6 | -54 | -42 | - | 8.24 | CTCTACGTCACG
 |  | Sin3b | -76 | -64 | - | 3.55 | TTTGACGCCACG
 |  | Skiv2l2 | -50 | -38 | - | 6.17 | TTCGGCGTCACT
 |  | Tra2a | -29 | -17 | + | 8.86 | CTTGACGTCAGG
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
7 | V$ATF_01 | ATF | 12.6123019838 | 0.56285715084 | - 125 : 4 | 1.98237351609e-08
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | Bcl2l13 | -36 | -22 | + | 9.85 | CCGTGACGTAGGCG
 |  | Bcl2l13 | -17 | -3 | - | 5.79 | GGGTGACCTCACCG
 |  | Car15 | -63 | -49 | + | 5.08 | CTTTGACGGTGGTT
 |  | Chmp2a | 0 | 14 | + | 8.03 | GTGTGACGTCAGGT
 |  | Coq5 | -21 | -7 | - | 6.78 | GGCCGCCGTCACCC
 |  | Coq5 | -4 | 10 | + | 7.92 | TGGTGACGCAACCC
 |  | Gtf3c1 | -33 | -19 | + | 7.63 | GCGTGACGTCACGG
 |  | Hbs1l | -125 | -111 | - | 5.86 | AGTCCACGTCAGTC
 |  | Hbs1l | 4 | 18 | + | 7.54 | GTATGACGTCGCGC
 |  | [NAME] | 0 | 14 | - | 5.3 | CGGCGGCGTCAAGA
 |  | Maml1 | -120 | -106 | + | 5.35 | [NAME]
 |  | Maml1 | -48 | -34 | + | 5.45 | CAGTGACGCAGAGT
 |  | Mettl2 | -10 | 4 | + | 6.1 | CAGTGACGCTACTT
 |  | Mrpl38 | -76 | -62 | - | 8.47 | GCATTACGTCAGGA
 |  | Rapgef6 | -55 | -41 | - | 7.8 | TCTCTACGTCACGG
 |  | Tob1 | -99 | -85 | + | 7.5 | CTGTGACGCGAGCG
 |  | Tra2a | -54 | -40 | - | 7.82 | CGACGACGTCATCA
 |  | Tra2a | -30 | -16 | + | 8.91 | CCTTGACGTCAGGC
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
8 | V$ELK1_02 | Elk-1 | 10.1617738341 | 0.559907832041 | - 292 : 20 | 3.73190296139e-07
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | Bcl2l13 | -244 | -230 | + | 8.16 | AGCACCGGAAATGA
 |  | Bcl2l13 | -80 | -66 | - | 9.09 | TGGCTTCCGGCTTG
 |  | C130022K22Rik | -8 | 6 | - | 8.71 | ACACTTCCGGTTCT
 |  | Ccng1 | -37 | -23 | + | 6.7 | ACAACGGGAAGTGT
 |  | Ccnk | -255 | -241 | - | 6.72 | GTGTTTCCTTTTGA
 |  | Cdkn1a | -206 | -192 | - | 6.06 | GGATTTCCTTTCTA
 |  | Chmp2a | 18 | 32 | + | 6.96 | TAATCCGGAAACGG
 |  | Coq5 | -269 | -255 | - | 6.46 | CGAGTTCCGGGCCA
 |  | Cdk12 | -132 | -118 | + | 7.06 | GCGACAGGAAGCCA
 |  | Fam179b | -218 | -204 | - | 7.23 | AAACTTCCGCCCCG
 |  | Fam179b | -192 | -178 | - | 7.7 | TCATTTCCGTCTAA
 |  | Fam179b | -62 | -48 | - | 7.46 | TGGTTTCCGGGTCA
 |  | Gspt2 | -61 | -47 | + | 6.86 | GGAGTCGGAAGTGA
 |  | Gtf3c1 | -150 | -136 | - | 6.26 | GCGGTTCCGGCCTC
 |  | Gtf3c1 | -135 | -121 | + | 9.1 | CGAACCGGAAGCGG
 |  | Gtf3c1 | -87 | -73 | - | 6.87 | GGGGTTCCGGACCA
 |  | Igbp1 | -20 | -6 | - | 6.19 | CTGCTTCCTGTGTC
 |  | Kin | -54 | -40 | - | 6.88 | CCATTTCCTGCTGT
 |  | Lat2 | -12 | 2 | + | 6.07 | CGAGGCGGATGTAG
 |  | Lat2 | 18 | 32 | + | 6.37 | GTGACAGGAAGCCA
 |  | Maml1 | -270 | -256 | + | 6.23 | GAACCCGGAAGGGA
 |  | Med4 | -58 | -44 | - | 7.01 | CTTCTTCCGGTTCC
 |  | Mettl2 | -2 | 12 | - | 8.68 | CTACTTCCGGAAGG
 |  | Mettl2 | 19 | 33 | + | 9.33 | CCCACAGGAAGTCC
 |  | Mettl6 | -96 | -82 | + | 7.45 | GGGGCCGGAAACCA
 |  | Mettl6 | -60 | -46 | + | 6.98 | CTCTGCGGAAGTAA
 |  | Mettl6 | -39 | -25 | - | 7.98 | GCACTTCCGGCATT
 |  | Mettl6 | -19 | -5 | - | 8.49 | GGACTTCCGTCTCC
 |  | Mknk2 | -292 | -278 | - | 6.13 | CCACTTCCCTCGGA
 |  | Mrps7 | -230 | -216 | + | 6.44 | AGCGCCGGATGCTC
 |  | Polk | -278 | -264 | - | 5.95 | CATCTTCCTGCCGG
 |  | Polr2d | -292 | -278 | + | 6.87 | GTTGCCGGAAACAA
 |  | Polr2d | -217 | -203 | + | 8.07 | ACGACCGGAAGCCG
 |  | Polr2d | -32 | -18 | - | 7.21 | CGGCTTCCGTCTCC
 |  | Rai12 | -177 | -163 | + | 6.64 | AAAGCAGGAAGTGG
 |  | Rapgef6 | -280 | -266 | - | 6.37 | CGATTTCCGCGGGG
 |  | Rapgef6 | -171 | -157 | - | 7.25 | GCATTTCCGGAACC
 |  | Rapgef6 | -157 | -143 | + | 9.33 | TCAACCGGAAGCTG
 |  | Rnf169 | 9 | 23 | + | 6.02 | CAAACGGGAAACAA
 |  | Rnf40 | -256 | -242 | + | 6.02 | TGTACAGGATGTTC
 |  | Rnf40 | 0 | 14 | + | 6.73 | GAAACAGGAAATAA
 |  | Rnf40 | 20 | 34 | - | 6.83 | CCACATCCGGAGCG
 |  | Rspry1 | -291 | -277 | - | 7.57 | GGGCTTCCTGTTCC
 |  | Rspry1 | -253 | -239 | - | 8.35 | CCGCTTCCGGCGGC
 |  | [NAME] | -148 | -134 | - | 8.09 | ATGCTTCCGGCAAG
 |  | Sesn2 | -111 | -97 | + | 6.29 | TTGGACGGAAGGTT
 |  | Usp49 | -195 | -181 | + | 6.7 | CTAACGGGAAGCGA
 |  | Zswim1 | -91 | -77 | + | 6.39 | ATAACCGGAATTAC
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
9 | V$CREB_Q2 | CREB | 13.0955618848 | 0.555555568387 | - 54 : 5 | 8.49322979622e-07
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | Bcl2l13 | -35 | -23 | + | 10.04 | CGTGACGTAGGC
 |  | C130022K22Rik | -38 | -26 | + | 5.9 | AATGACGCAAAC
 |  | Chmp2a | 1 | 13 | + | 9.73 | TGTGACGTCAGG
 |  | Coq5 | -3 | 9 | + | 10.55 | GGTGACGCAACC
 |  | Gtf3c1 | -32 | -20 | + | 9.8 | CGTGACGTCACG
 |  | Hbs1l | 5 | 17 | + | 6.37 | TATGACGTCGCG
 |  | Maml1 | -47 | -35 | + | 7.04 | AGTGACGCAGAG
 |  | Mettl2 | -9 | 3 | + | 5.37 | AGTGACGCTACT
 |  | Rapgef6 | -54 | -42 | - | 9.31 | CTCTACGTCACG
 |  | Skiv2l2 | -50 | -38 | - | 4.67 | TTCGGCGTCACT
 |  | Tra2a | -53 | -41 | - | 7.03 | GACGACGTCATC
 |  | Tra2a | -29 | -17 | + | 4.65 | CTTGACGTCAGG
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
10 | V$CREB_02 | CREB | 11.5593096289 | 0.572916666667 | - 52 : 9 | 1.04543528225e-06
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | Bcl2l13 | -37 | -25 | + | 6.91 | GCCGTGACGTAG
 |  | Bcl2l13 | -14 | -2 | - | 6.4 | TGACCTCACCGT
 |  | Coq5 | -5 | 7 | + | 9.41 | CTGGTGACGCAA
 |  | Fam179b | 9 | 21 | + | 6.79 | CTGGTTACGCCG
 |  | Gtf3c1 | -34 | -22 | + | 7.98 | AGCGTGACGTCA
 |  | [NAME] | 3 | 15 | - | 5.94 | CGGCGTCAAGAT
 |  | Maml1 | -49 | -37 | + | 6.23 | GCAGTGACGCAG
 |  | Mettl2 | -11 | 1 | + | 6.27 | CCAGTGACGCTA
 |  | Rapgef6 | -52 | -40 | - | 6.91 | CTACGTCACGGC
 |  | Skiv2l2 | -48 | -36 | - | 6.1 | CGGCGTCACTGT
 |  | Tra2a | -51 | -39 | - | 9.6 | CGACGTCATCAC
 |  | Tra2a | -31 | -19 | + | 7.36 | [NAME]
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
11 | V$YY1_02 | YY1 | 15.727418945 | 0.568181821704 | - 36 : 81 | 5.77095785586e-06
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 2310035C23Rik | -23 | -3 | - | 4.53 | CGGGGCGAAGATGGGACCAA
 |  | Bcl2l13 | -7 | 13 | - | 11.58 | ACCGTCCAACATGGCGGCGG
 |  | Coq5 | 37 | 57 | - | 5.47 | GGGTGTCACGATGGCGGCGC
 |  | Fam179b | 49 | 69 | + | 9.34 | CGGGGGCCATTTTGCCGGAG
 |  | Foxo3 | 79 | 99 | - | 4.26 | AGGAATGTGGAAGGCGGCGG
 |  | Ggps1 | 26 | 46 | - | 4.16 | TGCGGCGTCGCTGGCCGCTG
 |  | Hbs1l | 48 | 68 | - | 7.09 | GGAAGACAAGATGGCGCGGC
 |  | Igbp1 | 65 | 85 | - | 9.1 | TTTCCACAAGATGGCAGCGT
 |  | [NAME] | 3 | 23 | - | 12.52 | CGGCGTCAAGATGGCGGCGG
 |  | Maml1 | 7 | 27 | - | 3.83 | CAATTTTAAGATGGCGGCGG
 |  | Mrpl38 | 81 | 101 | - | 10.59 | TGGGGGAAAGATGGCGGCGC
 |  | Pdhx | 54 | 74 | - | 11.21 | AGCCGGGAAGATGGCGGCCT
 |  | Rnf169 | 14 | 34 | - | 9.58 | GGGAAACAAGATGGCGGCGG
 |  | Rnf40 | 79 | 99 | - | 5.64 | GAAATCCAAGATGGTGGCGC
 |  | Rsf1 | -2 | 18 | - | 7.72 | CCAGTTCAAAATGGCGGCGG
 |  | Rspry1 | 55 | 75 | + | 7.02 | CCGCGTCCATCTTTACCGCT
 |  | [NAME] | -36 | -16 | - | 3.67 | AGCCCGGAAGAGGGCAGTGT
 |  | Sin3b | 12 | 32 | - | 3.94 | GACTTCCAACATGGCGCATG
 |  | [NAME] | -35 | -15 | + | 4.02 | GTCCAGCCATGATTATTTAT
 |  | Tra2a | 14 | 34 | + | 10.99 | CGGGCGCCATTTTGCCTGAA
 |  | Zswim1 | -26 | -6 | + | 6.8 | TTTCCACCATTCTGTATCTA
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
12 | V$PAX5_02 | BSAP | 25.0815458655 | 0.535714293697 | -465:-434 | 2.12280806516e-05
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 2310035C23Rik | -465 | -437 | + | -4.51 | CACTTGCTATCTGGGCGGTGACAGCAAA
 |  | 2310035C23Rik | -434 | -406 | + | 2.58 | CGACAAAAAACTGAAGCGTGAAGGGAGA
 |  | Car15 | -434 | -406 | + | -2.07 | GAACTGGAATACTGAGAGGGGCAGCCCT
 |  | Gtf3c1 | -456 | -428 | - | -4.46 | ACCGCCAACCAACTTCGACATTCCCATC
 |  | Mrpl38 | -447 | -419 | + | -1.21 | AACTTGAGTTCCAGGGCAGAAGGGCTGA
 |  | Mrps7 | -450 | -422 | - | -2.25 | GGCGTGGCACCGCTCAACCCTCCCCGAG
 |  | Rsf1 | -461 | -433 | + | -3.63 | GGACTCTGAGCCACAGCGGTTCAGCCAC
 |  | Slc19a2 | -450 | -422 | - | -3.27 | TTGGCAGATAAGACTGAGCAGACTCGCT
 |  | [NAME] | -443 | -415 | + | -4.41 | AGGTTCTTTCTCGAAGGGGAACCACACA
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
13 | V$TAXCREB_01 | Tax/CREB | 16.2535902312 | 0.603921575523 | - 60 : 62 | 2.32574926139e-05
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 2310035C23Rik | -45 | -30 | + | 3.41 | TGGGGCTGAGGCGGG
 |  | C130022K22Rik | -60 | -45 | - | 4.7 | AGGTCGTAAATCCAA
 |  | C130022K22Rik | 15 | 30 | + | 4.71 | TGGGGGTGGCGGACT
 |  | Coq5 | -19 | -4 | - | 7.71 | CCGCCGTCACCCGGC
 |  | Cdk12 | -55 | -40 | - | 3.75 | CCGCCGTCGGCCCCA
 |  | Ggps1 | -5 | 10 | + | 3.5 | TAGGGATGGCGTATT
 |  | Gm889 | -33 | -18 | + | 5.45 | CTGGGTTTACGGGCC
 |  | Maml1 | -51 | -36 | + | 6.53 | CAGCAGTGACGCAGA
 |  | Mettl6 | -16 | -1 | - | 3.8 | CTTCCGTCTCCCCAA
 |  | Rapgef6 | -53 | -38 | - | 5.6 | TCTACGTCACGGCCA
 |  | Rapgef6 | 50 | 65 | + | 4.09 | GTGGGCTGAGGCCCT
 |  | Rnf40 | 62 | 77 | + | 8.04 | GGCCGGTGACGTCCG
 |  | Sesn2 | 3 | 18 | + | 3.34 | GCGGGCTGACAGAGC
 |  | Tra2a | -28 | -13 | - | 4.79 | TTGACGTCAGGCGCC
 |  | Upk1a | 36 | 51 | + | 4.17 | GGGGGTTGACAGGGC
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
14 | [NAME] | Egr-1 | 17.4600094237 | 0.677586769064 | - 37 : 24 | 3.32941269464e-05
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 2310035C23Rik | -37 | -25 | + | 3.31 | AGGCGGGGACGG
 |  | Bcl2l13 | 4 | 16 | + | 3.61 | TGGCGGCGGCGG
 |  | Cdk12 | 24 | 36 | + | 5.41 | CGGCGGGGGTGG
 |  | Ggps1 | -22 | -10 | - | 7.66 | ACGCCTGCGCAG
 |  | Gspt2 | 15 | 27 | - | 4.5 | CCGCCGCCGCAG
 |  | Mettl6 | 5 | 17 | + | 3.24 | TAGCGGGGGCAG
 |  | Mrpl38 | -2 | 10 | + | 2.95 | CTATGGAGGCGG
 |  | Mrps7 | 1 | 13 | + | 7.33 | GGGCGGGGGCGG
 |  | Pdhx | -20 | -8 | - | 3.9 | CAGCCCATGCAA
 |  | Rapgef6 | -10 | 2 | + | 3.64 | ATGCGCATGCGT
 |  | Rapgef6 | 20 | 32 | + | 4.24 | CCGCGCAGGCGT
 |  | Rsf1 | -32 | -20 | - | 6.13 | CCGCCCCCCCAT
 |  | Rsf1 | 9 | 21 | + | 3.61 | TGGCGGCGGCGG
 |  | Rspry1 | 13 | 25 | + | 7.38 | AAGCGGGGGTGG
 |  | Sin3b | -15 | -3 | + | 8.51 | AGGCGGAGGCGG
 |  | Skiv2l2 | -15 | -3 | + | 5.22 | TTGGGTAGGAGG
 |  | Slc19a2 | -33 | -21 | + | 2.83 | GCGTGGGGGCGG
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
15 | V$NFY_Q6 | NF-Y | 11.9351525509 | 0.472727279771 | -116:-47 | 8.36188494245e-05
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | Car15 | -96 | -85 | + | 5.73 | GATCCAATGTG
 |  | Ccng1 | -101 | -90 | + | 5.73 | GCTCCAATGAG
 |  | Fam179b | -67 | -56 | - | 7.91 | CAGATTGGTTT
 |  | Gm889 | -47 | -36 | + | 5.5 | CCACCAATTAT
 |  | Gtf3c1 | -79 | -68 | + | 6.27 | GGACCAATGGA
 |  | Maml1 | -76 | -65 | - | 8.53 | TTGATTGGCTA
 |  | Mettl6 | -88 | -77 | + | 6.01 | AAACCAATCTA
 |  | Mrpl38 | -105 | -94 | + | 7.04 | GCGCCAATGGG
 |  | Rnf40 | -89 | -78 | + | 9.28 | TGGCCAATCAT
 |  | Rspry1 | -69 | -58 | - | 8.6 | ATGATTGGCTG
 |  | Sesn2 | -115 | -104 | - | 6.64 | CTGATTGGACG
 |  | Sesn2 | -51 | -40 | - | 9.15 | CTGATTGGCTG
 |  | Tra2a | -116 | -105 | + | 6.71 | CCGCCAATCTC
 |  | Upk1a | -60 | -49 | - | 5.49 | GAGACTGGCTC
Results for Cluster 3:
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
1 | V$SP1_Q6 | Sp1 | 11.6644098901 | 0.789173803608 | - 124 : 10 | 4.81636887301e-32
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 0610031J06Rik | -24 | -11 | - | 7.05 | TGGCCCGCCCTCA
 |  | Fam189b | -99 | -86 | + | 6.58 | TGGAGGAGGGCCT
 |  | Fam189b | -20 | -7 | - | 6.2 | CACCACACCCCTC
 |  | 6230409E13Rik | -96 | -83 | + | 10.57 | GCGGGGCGGGGGC
 |  | 6230409E13Rik | -62 | -49 | - | 6.02 | TATCCCGCCTCTG
 |  | Arhgap42 | -113 | -100 | + | 6.48 | TGGAGGAGGGTCT
 |  | Arhgap42 | -62 | -49 | + | 9.37 | AGGGGGCGGGTTT
 |  | Ralgapa2 | -124 | -111 | + | 6.33 | GGAGGGCGGACCA
 |  | Ralgapa2 | -102 | -89 | + | 10.62 | GTGGGGCGGGGCC
 |  | Ralgapa2 | -75 | -62 | - | 6.25 | [NAME]
 |  | Ralgapa2 | -62 | -49 | - | 9.73 | TGCCCCGCCCCTG
 |  | Ralgapa2 | -43 | -30 | - | 9.53 | CGGCCCGCCCCTC
 |  | Ralgapa2 | 8 | 21 | + | 7.07 | GCCGGGAGGGGGG
 |  | Abca5 | -118 | -105 | - | 11.6 | AGCCCCGCCCCCA
 |  | Abca5 | -103 | -90 | - | 11.6 | AGCCCCGCCCCCA
 |  | Abca5 | -52 | -39 | - | 5.74 | ACGCACGCCCCGC
 |  | Abca5 | -26 | -13 | + | 6.2 | CAGGGGCGGGCAG
 |  | Adamts9 | -53 | -40 | - | 11.5 | GCCCCCGCCCCCT
 |  | Ak4 | -49 | -36 | + | 7.68 | GAGAGGAGGGGGC
 |  | Ankrd12 | -67 | -54 | + | 10.57 | CGGGGGCGGGGCA
 |  | Ankrd12 | -47 | -34 | - | 6.32 | CACGCCGCCCGTC
 |  | Manf | -43 | -30 | + | 5.79 | GGTGGGCGCGGGG
 |  | [NAME] | -120 | -107 | - | 11.37 | CCCCCCGCCCCCC
 |  | [NAME] | -91 | -78 | + | 7.24 | GGGAGGCGGAAGC
 |  | [NAME] | -77 | -64 | + | 6.28 | ACAGGGCGGCGGC
 |  | [NAME] | -39 | -26 | + | 7.63 | GCGGGGCCGGGGC
 |  | Atp6ap2 | -121 | -108 | - | 7.84 | GCCTCCGCCCCAA
 |  | Atp6ap2 | -27 | -14 | + | 9.8 | AAGGGGAGGGGCT
 |  | Atp6v0b | 10 | 23 | + | 9.35 | GCGGGGCGGGCCG
 |  | Atp6v1h | -105 | -92 | - | 6.8 | GCTTCCGCCCTCA
 |  | Bnip3l | -108 | -95 | - | 8.54 | GGTCACGCCCCCT
 |  | Bnip3l | -83 | -70 | - | 6.13 | [NAME]
 |  | Bnip3l | -45 | -32 | + | 5.74 | TCCGGGAGGGCCC
 |  | Bnip3l | -23 | -10 | + | 6.93 | GAAGGGAGGGACT
 |  | Bnip3l | 5 | 18 | + | 10.03 | AGGGGGCGGGGGA
 |  | Calr | -13 | 0 | + | 9.11 | GAGGGGCGGGCTC
 |  | Clcn3 | -121 | -108 | - | 7.01 | GGCCACGCCCTGG
 |  | Cpeb2 | -55 | -42 | + | 6.64 | TCTAGGCGGGGCA
 |  | Creg1 | -82 | -69 | - | 9.58 | AGCCACGCCCCCT
 |  | Creg1 | -38 | -25 | + | 7.52 | GAGGGGCGGAACA
 |  | Creld2 | -54 | -41 | + | 11.32 | GGTGGGCGGGGCC
 |  | Creld2 | 5 | 18 | + | 9.09 | GGTGGGCGGAGGC
 |  | Cth | -124 | -111 | + | 9.43 | GGGAGGCGGGGCA
 |  | Cth | -32 | -19 | - | 9.2 | GGCCCCTCCCCAC
 |  | Ctsd | -107 | -94 | + | 7.98 | TAAGGGAGGGGCG
 |  | Ctsd | -82 | -69 | - | 8.37 | GGATCCGCCCCTC
 |  | Ctsd | 4 | 17 | + | 8.33 | AGTGGGCGGGCGC
 |  | Ddit3 | -93 | -80 | + | 7.62 | ATGAGGCGGAGCC
 |  | Ddit3 | -43 | -30 | - | 8.13 | GACCCTGCCCCCC
 |  | Ddit3 | -29 | -16 | + | 6.1 | CCCAGGAGGGGCC
 |  | Dirc2 | -60 | -47 | - | 9.24 | GACCCCGCCTCGC
 |  | Dnajb11 | -69 | -56 | - | 6.48 | CGCGCCGCCTCGG
 |  | Dock11 | -124 | -111 | - | 6.04 | GCCGCCGCCCGGC
 |  | Dock11 | -70 | -57 | + | 8.01 | AGAGGGAGGAGCG
 |  | Dock11 | -51 | -38 | + | 8.2 | GGGAGGAGGAGCC
 |  | Dock11 | -30 | -17 | + | 5.77 | TGGGCGCGGGGCG
 |  | Dpp7 | -36 | -23 | - | 8.29 | TGCCCCGCCCGTT
 |  | Dtna | -122 | -109 | + | 6.73 | AATGGGCGGAAGC
 |  | Dtna | -107 | -94 | + | 5.76 | CCTGGGAGGGAGG
 |  | E430025E21Rik | -33 | -20 | - | 7.99 | GCCGCCGCCCCTT
 |  | Eml5 | -78 | -65 | + | 7.47 | TCCGGGAGGGGCG
 |  | Eml5 | -56 | -43 | + | 7.51 | GAGAGGTGGGGCT
 |  | Eml5 | -39 | -26 | + | 9.55 | CAGGGGAGGGGCG
 |  | Eml5 | -17 | -4 | - | 9.75 | GGCTCCGCCCTCC
 |  | Eno2 | -21 | -8 | - | 6.39 | AGCCCTTCCCCCA
 |  | Erbb2 | -93 | -80 | - | 5.91 | AGCCACTCCCAGT
 |  | Erbb2 | -62 | -49 | + | 8.37 | GAGGGGTGGGGGG
 |  | Erbb2 | -10 | 3 | + | 7.11 | AGGAGGCGGAGGA
 |  | Fnip1 | -121 | -108 | - | 10.9 | GGCCCCGCCTCCC
 |  | Fnip1 | -107 | -94 | - | 8.02 | ACCCCCACCCCGC
 |  | Fnip1 | -28 | -15 | - | 10.02 | CGCTCCGCCCCGC
 |  | [NAME] | -122 | -109 | - | 8.87 | CCCACCGCCCCCC
 |  | [NAME] | -77 | -64 | - | 6.89 | [NAME]
 |  | [NAME] | -1 | 12 | + | 10.97 | CAGGGGCGGGGCG
 |  | Fyn | -90 | -77 | + | 8.74 | AGGGGGAGGGATG
 |  | Fzd3 | -15 | -2 | - | 6.88 | CGCACCTCCCTCC
 |  | Gadd45a | -117 | -104 | - | 9.95 | AGCTCCGCCCCTT
 |  | Gga2 | -42 | -29 | + | 6.75 | GGGAGGAGGTGCG
 |  | Gga2 | -29 | -16 | + | 9.09 | TGGGGGCGGGACA
 |  | Gga2 | -7 | 6 | + | 5.85 | AATGGGCGTGTCC
 |  | Gga2 | 10 | 23 | - | 9.48 | GGGCCCGCCCCGT
 |  | Gpt2 | -36 | -23 | + | 7.46 | [NAME]
 |  | Grn | -56 | -43 | + | 6.71 | TGGGGGAGGCGGG
 |  | Herpud1 | -96 | -83 | - | 6 | TAGCCCGCCTCTC
 |  | [NAME] | -79 | -66 | - | 8.44 | GGGCCCGCCTCCG
 |  | Hyou1 | -58 | -45 | + | 11.7 | GAGGGGCGGGGCC
 |  | Hyou1 | -42 | -29 | + | 9.26 | GAGGGGCGGGTCT
 |  | Hyou1 | 5 | 18 | + | 7.93 | CGTGGGCGGTGCT
 |  | [NAME] | -113 | -100 | - | 7.37 | TGCCCCGCCTATC
 |  | [NAME] | -62 | -49 | + | 10.4 | AGGGGGCGGGTCC
 |  | [NAME] | -105 | -92 | - | 7.18 | GGCCCCTGCCCCT
 |  | [NAME] | -85 | -72 | + | 12.23 | AGGGGGCGGGGCG
 |  | [NAME] | -102 | -89 | + | 6.06 | CCAGGGCGTGGGC
 |  | Letmd1 | -48 | -35 | - | 6.34 | GTCCCCGCCCGGG
 |  | Letmd1 | -28 | -15 | + | 7.01 | GGGGGGCGCGGGG
 |  | Letmd1 | 10 | 23 | + | 8.81 | GAGGGGCGGCGCG
 |  | Lmbr1l | -38 | -25 | - | 6.72 | AAACCCGCCCAGG
 |  | Lpar4 | -70 | -57 | + | 7.25 | ATTGGGCGGGATC
 |  | Map3k1 | -123 | -110 | + | 6.54 | GGGAGGCGCGGCC
 |  | Map3k1 | -73 | -60 | - | 8.42 | GCGCCCGCCCACC
 |  | Map3k1 | -53 | -40 | - | 9.19 | CGCTCCGCCCGCC
 |  | Map3k1 | -31 | -18 | - | 9.4 | CTCCCCGCCCCCT
 |  | Esyt1 | -70 | -57 | + | 10.97 | CAGGGGCGGGGCG
 |  | Mfsd1 | -58 | -45 | + | 7.57 | GAGAGGCGTGGCC
 |  | Mfsd11 | -60 | -47 | - | 10.09 | GGTCCCGCCCCGC
 |  | Mfsd11 | -46 | -33 | - | 7.51 | CGCCCCGCCGCCA
 |  | Mfsd11 | -1 | 12 | + | 9.24 | GCGAGGCGGGGTC
 |  | Mink1 | -110 | -97 | - | 8.15 | [NAME]
 |  | Mink1 | -66 | -53 | + | 6.16 | CGCAGGAGGGGGC
 |  | Mospd1 | -121 | -108 | - | 11.65 | AGCCCCGCCCCCG
 |  | Mospd1 | -104 | -91 | - | 10.38 | GACCCCGCCCCGG
 |  | Mospd1 | -70 | -57 | - | 5.91 | TCACCCACCCCCC
 |  | Mospd1 | -41 | -28 | + | 6.75 | CCTGGGCGGGGAG
 |  | Mpp5 | -68 | -55 | + | 6.66 | CGGGGGCCGGTCT
 |  | Mpp5 | -1 | 12 | + | 6.6 | GTGAGGAGGGGGC
 |  | Ppp1r15a | -28 | -15 | - | 9.42 | GACCCCGCCTCTC
 |  | Nans | -76 | -63 | + | 11.31 | GAGGGGCGGGGCT
 |  | Nbas | -10 | 3 | - | 8.13 | TGCCCCTCCCTCC
 |  | Pdia4 | 9 | 22 | + | 11.3 | GCGGGGCGGGGCG
 |  | Pdia6 | -19 | -6 | - | 8.22 | CGGCCCGCCTCCG
 |  | Pdia6 | 2 | 15 | - | 7.88 | CGCACCGCCCGCT
 |  | Pfkp | -74 | -61 | - | 9.68 | GGCCCCGCCCTTG
 |  | Pfkp | -57 | -44 | - | 8.66 | AGTCCCGCCCATC
 |  | Pfkp | -27 | -14 | + | 8.05 | CTCGGGCGGGGCG
 |  | Pfkp | 3 | 16 | + | 7.03 | TGCAGGCGGGGCA
 |  | Pgap1 | -100 | -87 | - | 8.01 | GCCCCCTCCTCCG
 |  | Pgap1 | -30 | -17 | + | 8.84 | AAGGGGAGGGGGT
 |  | Pgm2l1 | -75 | -62 | + | 8.77 | AGAGGGTGGGGCC
 |  | Pgm2l1 | -32 | -19 | + | 6.74 | CAGAGGCGGGCTG
 |  | Pi4k2b | -107 | -94 | - | 9.42 | TACCCCGCCCCGC
 |  | Pi4k2b | -92 | -79 | - | 8.14 | CGCCCCACCCTCG
 |  | Pi4k2b | -77 | -64 | - | 8.83 | TGCCCCACCCCCT
 |  | Pi4k2b | -25 | -12 | + | 9.84 | GAGAGGCGGGGCG
 |  | Pi4k2b | -3 | 10 | + | 7.82 | GCTGGGCGTGGCC
 |  | Ppp2r5b | -121 | -108 | - | 6.62 | AGTTCCTCCCCTA
 |  | Ppp2r5b | -8 | 5 | + | 6.88 | GGAGGGAGGTGCG
 |  | Ppp2r5b | 6 | 19 | + | 7.07 | GCCGGGAGGGGGG
 |  | Rab3gap2 | -86 | -73 | - | 7.27 | GCACCCTCCCCTC
 |  | Rab3gap2 | -43 | -30 | - | 9.71 | GTCCCCGCCCCCC
 |  | Rnf185 | -106 | -93 | - | 6.89 | ACGCCCTCCCCTT
 |  | Rnf185 | -87 | -74 | + | 7.92 | CCGGGGCGGAACT
 |  | Rragc | -87 | -74 | - | 7.49 | CAGCCCGCCCAGC
 |  | Rragc | -29 | -16 | + | 7.98 | TATGGGCGGGCCC
 |  | Rragc | -1 | 12 | + | 8.41 | CGGGGGCGGCGGC
 |  | Samd8 | -56 | -43 | - | 8.6 | TCCCCCTCCCCCT
 |  | Samd8 | -17 | -4 | - | 10.4 | GGACCCGCCCCCT
 |  | Samd8 | 4 | 17 | - | 10.68 | CGCCCCGCCTCCC
 |  | Sdf2l1 | -88 | -75 | + | 9.83 | TGGGGGTGGGGCC
 |  | Sdf2l1 | -17 | -4 | + | 6.48 | CGTGGGAGGGCGC
 |  | Serac1 | -58 | -45 | + | 7.21 | AGTAGGTGGGGCG
 |  | Serac1 | -40 | -27 | + | 8.17 | CTGGGGCGGGCCC
 |  | Serac1 | -27 | -14 | + | 8.99 | TAAGGGCGGGGTC
 |  | Serac1 | -7 | 6 | + | 8.92 | CAGAGGCGGGGTC
 |  | Sfmbt2 | -117 | -104 | + | 8.66 | GGGGGGAGGAGGG
 |  | Sfmbt2 | -79 | -66 | - | 6.65 | GACCACTCCCCTG
 |  | Slc12a6 | -97 | -84 | + | 9.84 | CCGGGGCGGGGGG
 |  | Slc12a6 | -52 | -39 | + | 8.63 | CCGGGGAGGGGGC
 |  | Slc24a6 | -124 | -111 | - | 7.01 | ACCCCCACCCTCG
 |  | Slc24a6 | -87 | -74 | + | 9.9 | CTGGGGCGGGGCG
 |  | Slc24a6 | -57 | -44 | + | 6.07 | CTTGGGCGGGGAC
 |  | Slc24a6 | -37 | -24 | + | 5.78 | CTCGGGCGTGGCC
 |  | Slc24a6 | -15 | -2 | + | 7.46 | AGTAGGCGGAGTG
 |  | Slc24a6 | 5 | 18 | + | 9.5 | TGGGGGCGTGGCC
 |  | Slc25a27 | -124 | -111 | + | 6.53 | AGGCGGCGGAGCT
 |  | Slc36a1 | -67 | -54 | + | 6.73 | GGGAGGAGGAGCA
 |  | Smyd3 | -19 | -6 | - | 8.35 | GTCTCCGCCCCCT
 |  | Snx30 | -95 | -82 | + | 11.1 | GGTGGGCGGGGCG
 |  | Snx30 | -81 | -68 | - | 5.76 | GCCGCCTCCTCCT
 |  | Snx30 | -65 | -52 | - | 8.96 | AGCTCCGCCCCAC
 |  | Snx30 | -48 | -35 | - | 9.37 | CGTCCCGCCCTCC
 |  | Snx30 | -13 | 0 | + | 11.65 | CGGGGGCGGGGCT
 |  | Snx30 | 6 | 19 | + | 7.29 | CGTGGGCGGCGTG
 |  | Snx8 | -120 | -107 | + | 8.03 | TAGGGGCGTGGTC
 |  | Snx8 | -93 | -80 | + | 5.8 | GAGCGGAGGGGCG
 |  | Snx8 | -68 | -55 | + | 7.49 | CATGGGCGTGGCC
 |  | Snx8 | -37 | -24 | + | 10.43 | CGTGGGCGGGGCT
 |  | Snx8 | -23 | -10 | + | 6.77 | GCCGGGCGGGCGC
 |  | Sord | -49 | -36 | - | 8.48 | TCCCCCGCCTCCC
 |  | Sord | -20 | -7 | - | 10.18 | GACCCCGCCTCCT
 |  | Sord | 9 | 22 | - | 11.02 | GGCCCCGCCCCGG
 |  | Ssfa2 | -119 | -106 | + | 8.45 | AGGGGGCAGGGCG
 |  | Ssfa2 | -97 | -84 | + | 8.16 | [NAME]
 |  | Ssfa2 | -82 | -69 | + | 6.77 | GCCGGGCGGGCGC
 |  | Ssfa2 | 5 | 18 | - | 9.25 | CCCTCCGCCCCTC
 |  | Strbp | -100 | -87 | + | 7.38 | AGTGGGAGGGGGA
 |  | Strbp | -40 | -27 | - | 7.45 | TGCCCCTCCTCCA
 |  | Tbc1d8b | -17 | -4 | + | 6.61 | CGTGGGAGGGAGT
 |  | Tet1 | 7 | 20 | - | 10.09 | GGTCCCGCCCCGC
 |  | Txndc16 | -107 | -94 | - | 5.82 | CGGTCCTCCCGCC
 |  | Vps13a | -119 | -106 | + | 7.72 | CAAGGGCGGGCCC
 |  | Vps13a | -70 | -57 | - | 5.99 | GGCCGCGCCTCCA
 |  | Vps13a | -47 | -34 | - | 8.07 | GGTCACGCCCCCA
 |  | Wdr7 | -120 | -107 | - | 5.93 | GACCACGCCTGCC
 |  | Wdr81 | -75 | -62 | + | 6.21 | CAGGGGTGGGGAC
 |  | Wdr81 | -56 | -43 | + | 7.9 | AAGAGGCGGGATC
 |  | Wdr81 | -42 | -29 | - | 6.93 | CGCCCGGCCCTTT
 |  | Wipi1 | -71 | -58 | - | 7.25 | CACTCCTCCTCCT
 |  | Zfp691 | -13 | 0 | - | 8.9 | TCCCCCGCCCACC
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
2 | V$GC_01 | GC box | 11.5380830882 | 0.682481751374 | - 125 : 10 | 1.96058066839e-27
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 0610031J06Rik | -25 | -11 | - | 6.14 | TTGGCCCGCCCTCA
 |  | Fam189b | -99 | -85 | + | 6.23 | TGGAGGAGGGCCTC
 |  | Fam189b | -21 | -7 | - | 7.38 | CCACCACACCCCTC
 |  | 6230409E13Rik | -96 | -82 | + | 7.77 | GCGGGGCGGGGGCA
 |  | Arhgap42 | -113 | -99 | + | 8.6 | TGGAGGAGGGTCTG
 |  | Arhgap42 | -62 | -48 | + | 8.76 | AGGGGGCGGGTTTC
 |  | Ralgapa2 | -124 | -110 | + | 5.87 | [NAME]
 |  | Ralgapa2 | -102 | -88 | + | 10.4 | GTGGGGCGGGGCCG
 |  | Ralgapa2 | -76 | -62 | - | 6.59 | CGACACCGCCTTCC
 |  | Ralgapa2 | -44 | -30 | - | 7.55 | TCGGCCCGCCCCTC
 |  | Abca5 | -119 | -105 | - | 10.87 | GAGCCCCGCCCCCA
 |  | Abca5 | -104 | -90 | - | 11.37 | TAGCCCCGCCCCCA
 |  | Abca5 | -48 | -34 | - | 10.37 | ACGCCCCGCCCTCA
 |  | Abca5 | -15 | -1 | + | 8.06 | AGGGGGCGTGTCTC
 |  | Adamts9 | -54 | -40 | - | 9.25 | GGCCCCCGCCCCCT
 |  | Ak4 | -49 | -35 | + | 7.64 | GAGAGGAGGGGGCG
 |  | Ankrd12 | -67 | -53 | + | 8.43 | CGGGGGCGGGGCAC
 |  | Armcx1 | -75 | -61 | + | 6.47 | GATGGGAGTGGCAG
 |  | Manf | -47 | -33 | + | 5.91 | TATGGGTGGGCGCG
 |  | [NAME] | -121 | -107 | - | 9.54 | CCCCCCCGCCCCCC
 |  | [NAME] | -33 | -19 | + | 8.47 | CCGGGGCGGGGGCT
 |  | Atp6ap2 | -122 | -108 | - | 8.58 | CGCCTCCGCCCCAA
 |  | Atp6ap2 | -27 | -13 | + | 11.22 | AAGGGGAGGGGCTT
 |  | Atp6v0b | 10 | 24 | + | 6.43 | GCGGGGCGGGCCGA
 |  | Bnip3l | -109 | -95 | - | 7.67 | TGGTCACGCCCCCT
 |  | Bnip3l | -23 | -9 | + | 7.38 | GAAGGGAGGGACTG
 |  | Bnip3l | 5 | 19 | + | 8.31 | AGGGGGCGGGGGAA
 |  | Calr | -13 | 1 | + | 7.24 | GAGGGGCGGGCTCA
 |  | Clcn3 | -122 | -108 | - | 7.45 | CGGCCACGCCCTGG
 |  | Cpeb2 | -55 | -41 | + | 7.37 | TCTAGGCGGGGCAG
 |  | Cpox | -26 | -12 | - | 7.3 | AGGACCCACCTCTG
 |  | Creg1 | -83 | -69 | - | 9.57 | GAGCCACGCCCCCT
 |  | Creg1 | -38 | -24 | + | 6.14 | GAGGGGCGGAACAA
 |  | Creld2 | -54 | -40 | + | 10.63 | GGTGGGCGGGGCCT
 |  | Creld2 | 5 | 19 | + | 8.32 | GGTGGGCGGAGGCT
 |  | Cth | -124 | -110 | + | 9.03 | GGGAGGCGGGGCAG
 |  | Cth | -33 | -19 | - | 9.26 | CGGCCCCTCCCCAC
 |  | Ctsd | -107 | -93 | + | 9.17 | TAAGGGAGGGGCGG
 |  | Ctsd | -83 | -69 | - | 9.08 | AGGATCCGCCCCTC
 |  | Ctsd | 4 | 18 | + | 7.48 | AGTGGGCGGGCGCG
 |  | Ddit3 | -93 | -79 | + | 8.23 | ATGAGGCGGAGCCA
 |  | Ddit3 | -44 | -30 | - | 7.7 | GGACCCTGCCCCCC
 |  | Dirc2 | -61 | -47 | - | 6.88 | GGACCCCGCCTCGC
 |  | Dock11 | -70 | -56 | + | 8.76 | AGAGGGAGGAGCGG
 |  | Dock11 | -51 | -37 | + | 8.55 | GGGAGGAGGAGCCG
 |  | Dpp7 | -37 | -23 | - | 7.56 | CTGCCCCGCCCGTT
 |  | Dtna | -122 | -108 | + | 6.79 | AATGGGCGGAAGCT
 |  | Dtna | -103 | -89 | + | 9.32 | GGAGGGAGGGGCCG
 |  | Eml5 | -78 | -64 | + | 6.02 | TCCGGGAGGGGCGG
 |  | Eml5 | -56 | -42 | + | 8.41 | GAGAGGTGGGGCTA
 |  | Eml5 | -39 | -25 | + | 9.58 | CAGGGGAGGGGCGG
 |  | Eml5 | -18 | -4 | - | 9.69 | [NAME]
 |  | Eno2 | -22 | -8 | - | 9.65 | CAGCCCTTCCCCCA
 |  | Erbb2 | -94 | -80 | - | 7.78 | CAGCCACTCCCAGT
 |  | Erbb2 | -62 | -48 | + | 8.18 | GAGGGGTGGGGGGG
 |  | Erbb2 | -10 | 4 | + | 7.42 | AGGAGGCGGAGGAG
 |  | Fnip1 | -122 | -108 | - | 10.46 | CGGCCCCGCCTCCC
 |  | Fnip1 | -108 | -94 | - | 7.85 | CACCCCCACCCCGC
 |  | Fnip1 | -29 | -15 | - | 7.55 | GCGCTCCGCCCCGC
 |  | [NAME] | -123 | -109 | - | 7.6 | CCCCACCGCCCCCC
 |  | [NAME] | -1 | 13 | + | 10.71 | CAGGGGCGGGGCGG
 |  | Fyn | -90 | -76 | + | 6.74 | AGGGGGAGGGATGA
 |  | Gadd45a | -118 | -104 | - | 10.68 | TAGCTCCGCCCCTT
 |  | Gga2 | -42 | -28 | + | 6.81 | GGGAGGAGGTGCGT
 |  | Gga2 | -7 | 7 | + | 7.25 | AATGGGCGTGTCCA
 |  | Gga2 | 9 | 23 | - | 8.55 | AGGGCCCGCCCCGT
 |  | Gpt2 | -36 | -22 | + | 7.39 | CCGAGGCGGAGTCG
 |  | Grn | -67 | -53 | - | 6.85 | AAGCTCTGCCCTGG
 |  | [NAME] | -80 | -66 | - | 7.77 | AGGGCCCGCCTCCG
 |  | Hyou1 | -58 | -44 | + | 11.43 | GAGGGGCGGGGCCG
 |  | Hyou1 | -42 | -28 | + | 10.15 | GAGGGGCGGGTCTT
 |  | Hyou1 | 5 | 19 | + | 7.85 | CGTGGGCGGTGCTA
 |  | [NAME] | -114 | -100 | - | 8.01 | CTGCCCCGCCTATC
 |  | [NAME] | -62 | -48 | + | 10.77 | AGGGGGCGGGTCCG
 |  | [NAME] | -105 | -91 | - | 6.83 | GGCCCCTGCCCCTC
 |  | [NAME] | -85 | -71 | + | 10.79 | AGGGGGCGGGGCGA
 |  | [NAME] | -102 | -88 | + | 5.91 | CCAGGGCGTGGGCG
 |  | Lpar4 | -70 | -56 | + | 6.33 | ATTGGGCGGGATCA
 |  | Map3k1 | -74 | -60 | - | 6.77 | CGCGCCCGCCCACC
 |  | Map3k1 | -54 | -40 | - | 7.17 | CCGCTCCGCCCGCC
 |  | Map3k1 | -26 | -12 | - | 7.78 | CGCCCCCTCCCTCC
 |  | Esyt1 | -70 | -56 | + | 10.71 | CAGGGGCGGGGCGG
 |  | Mfsd1 | -58 | -44 | + | 7.3 | GAGAGGCGTGGCCC
 |  | Mfsd1 | 7 | 21 | - | 6.91 | CCGCCCTGCCTTTG
 |  | Mfsd11 | -61 | -47 | - | 8.21 | CGGTCCCGCCCCGC
 |  | Mfsd11 | -47 | -33 | - | 6.76 | CCGCCCCGCCGCCA
 |  | Mfsd11 | -1 | 13 | + | 8.3 | GCGAGGCGGGGTCT
 |  | Mospd1 | -122 | -108 | - | 11.58 | AAGCCCCGCCCCCG
 |  | Mospd1 | -105 | -91 | - | 9.19 | AGACCCCGCCCCGG
 |  | Mospd1 | -71 | -57 | - | 5.88 | CTCACCCACCCCCC
 |  | Mospd1 | -18 | -4 | - | 5.94 | CGAGTCCTCCCATA
 |  | Mpp5 | -46 | -32 | + | 7.25 | TCGAGGAGGAGTTG
 |  | Mpp5 | -1 | 13 | + | 6.6 | GTGAGGAGGGGGCG
 |  | Ppp1r15a | -29 | -15 | - | 9.42 | AGACCCCGCCTCTC
 |  | Nans | -96 | -82 | + | 5.98 | TAGAGGCGTAGGCA
 |  | Nans | -76 | -62 | + | 11.65 | GAGGGGCGGGGCTT
 |  | Nbas | -11 | 3 | - | 6.4 | [NAME]
 |  | Pdia4 | 9 | 23 | + | 9.81 | GCGGGGCGGGGCGG
 |  | Pdia6 | -20 | -6 | - | 7.35 | CCGGCCCGCCTCCG
 |  | Pfkp | -75 | -61 | - | 10.02 | AGGCCCCGCCCTTG
 |  | Pfkp | -58 | -44 | - | 7.27 | GAGTCCCGCCCATC
 |  | Pfkp | -27 | -13 | + | 6.46 | CTCGGGCGGGGCGT
 |  | Pfkp | 3 | 17 | + | 6.37 | TGCAGGCGGGGCAG
 |  | Pgap1 | -101 | -87 | - | 7.48 | AGCCCCCTCCTCCG
 |  | Pgap1 | -30 | -16 | + | 9.76 | AAGGGGAGGGGGTG
 |  | Pgm2l1 | -75 | -61 | + | 9.88 | AGAGGGTGGGGCCT
 |  | Pi4k2b | -113 | -99 | - | 6.01 | ATGCCCTACCCCGC
 |  | Pi4k2b | -98 | -84 | - | 9.9 | CCGCCCCGCCCCAC
 |  | Pi4k2b | -78 | -64 | - | 8.64 | TTGCCCCACCCCCT
 |  | Pi4k2b | -25 | -11 | + | 9.74 | GAGAGGCGGGGCGT
 |  | Pi4k2b | -3 | 11 | + | 7.91 | GCTGGGCGTGGCCG
 |  | Ppp2r5b | -122 | -108 | - | 6.73 | GAGTTCCTCCCCTA
 |  | Ppp2r5b | -8 | 6 | + | 6.88 | GGAGGGAGGTGCGG
 |  | Rab3gap2 | -87 | -73 | - | 7.17 | AGCACCCTCCCCTC
 |  | Rab3gap2 | -44 | -30 | - | 6.08 | CGTCCCCGCCCCCC
 |  | Rnf185 | -107 | -93 | - | 5.88 | GACGCCCTCCCCTT
 |  | Rnf185 | -87 | -73 | + | 7.44 | CCGGGGCGGAACTT
 |  | Rragc | -29 | -15 | + | 8.59 | TATGGGCGGGCCCT
 |  | Samd8 | -57 | -43 | - | 8.17 | CTCCCCCTCCCCCT
 |  | Samd8 | -18 | -4 | - | 9.78 | TGGACCCGCCCCCT
 |  | Samd8 | 3 | 17 | - | 8.47 | GCGCCCCGCCTCCC
 |  | Sdf2l1 | -88 | -74 | + | 10.85 | TGGGGGTGGGGCCG
 |  | Serac1 | -58 | -44 | + | 7.59 | AGTAGGTGGGGCGA
 |  | Serac1 | -40 | -26 | + | 7.71 | CTGGGGCGGGCCCT
 |  | Serac1 | -7 | 7 | + | 8.29 | CAGAGGCGGGGTCA
 |  | Sfmbt2 | -117 | -103 | + | 6.64 | GGGGGGAGGAGGGA
 |  | Sfmbt2 | -99 | -85 | + | 6.04 | AGGGGGAAGGACAG
 |  | Sfmbt2 | -80 | -66 | - | 6.75 | TGACCACTCCCCTG
 |  | Slc12a6 | -97 | -83 | + | 6.56 | CCGGGGCGGGGGGC
 |  | Slc12a6 | -52 | -38 | + | 5.92 | CCGGGGAGGGGGCC
 |  | Slc24a6 | -125 | -111 | - | 7.71 | AACCCCCACCCTCG
 |  | Slc24a6 | -87 | -73 | + | 8.69 | CTGGGGCGGGGCGA
 |  | Slc24a6 | -68 | -54 | + | 8.22 | AAAGGGCGTGTCTT
 |  | Slc24a6 | -15 | -1 | + | 8.21 | AGTAGGCGGAGTGG
 |  | Slc24a6 | 5 | 19 | + | 9.55 | TGGGGGCGTGGCCA
 |  | Smyd3 | -20 | -6 | - | 6.02 | CGTCTCCGCCCCCT
 |  | Snx30 | -95 | -81 | + | 10.2 | GGTGGGCGGGGCGG
 |  | Snx30 | -79 | -65 | - | 6.38 | CGCCTCCTCCTTCA
 |  | Snx30 | -61 | -47 | - | 7.48 | CCGCCCCACCCTGC
 |  | Snx30 | -13 | 1 | + | 11.65 | CGGGGGCGGGGCTG
 |  | Snx8 | -120 | -106 | + | 9.51 | TAGGGGCGTGGTCT
 |  | Snx8 | -88 | -74 | + | 8.42 | GAGGGGCGTGGCGA
 |  | Snx8 | -68 | -54 | + | 7.83 | CATGGGCGTGGCCA
 |  | Snx8 | -37 | -23 | + | 10.78 | CGTGGGCGGGGCTG
 |  | Sord | -50 | -36 | - | 5.99 | GTCCCCCGCCTCCC
 |  | Sord | -21 | -7 | - | 10.35 | CGACCCCGCCTCCT
 |  | Sord | 8 | 22 | - | 10.01 | AGGCCCCGCCCCGG
 |  | Ssfa2 | -119 | -105 | + | 10.21 | AGGGGGCAGGGCGG
 |  | Ssfa2 | -97 | -83 | + | 8.2 | AGTAGGCGGGACCG
 |  | Ssfa2 | 4 | 18 | - | 7.13 | GCCCTCCGCCCCTC
 |  | Strbp | -100 | -86 | + | 7.3 | AGTGGGAGGGGGAG
 |  | Strbp | -41 | -27 | - | 8.38 | CTGCCCCTCCTCCA
 |  | Tbc1d8b | -17 | -3 | + | 5.93 | CGTGGGAGGGAGTT
 |  | Tet1 | 6 | 20 | - | 8.21 | CGGTCCCGCCCCGC
 |  | Vps13a | -119 | -105 | + | 7.71 | CAAGGGCGGGCCCG
 |  | Vps13a | -71 | -57 | - | 6.85 | CGGCCGCGCCTCCA
 |  | Vps13a | -48 | -34 | - | 8.45 | CGGTCACGCCCCCA
 |  | Wdr81 | -56 | -42 | + | 8.03 | AAGAGGCGGGATCT
 |  | Wipi1 | -72 | -58 | - | 7.94 | CCACTCCTCCTCCT
 |  | Zfp691 | -51 | -37 | + | 7.48 | TGAAGGCGGATCCT
 |  | Zfp691 | -14 | 0 | - | 6.74 | TTCCCCCGCCCACC
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
3 | V$SREBP1_01 | SREBP-1 | 14.1976081907 | 0.501346806572 | - 89: 25 | 2.25966118712e-24
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 0610031J06Rik | 9 | 20 | + | 7.17 | AGTCATGTGAC
 |  | 6230409E13Rik | -25 | -14 | + | 9.18 | CATCACGTGGC
 |  | Ankrd12 | -21 | -10 | + | 7.42 | AGTCACGTGTC
 |  | Ankrd12 | -4 | 7 | + | 8.73 | GGTCACGTGCT
 |  | Armcx1 | -31 | -20 | + | 8.23 | CCTCACGTGAG
 |  | Atp6v0b | -35 | -24 | + | 6.89 | GGTCACGTGGG
 |  | Atp6v0b | -17 | -6 | + | 9.37 | CATCACGTGCG
 |  | Atp6v0b | -4 | 7 | + | 4.53 | GGTCAGGTGGC
 |  | Atp6v1h | -87 | -76 | + | 7.95 | GGTCACGTGCG
 |  | Atp6v1h | -73 | -62 | + | 7.26 | GCTCACGTGCC
 |  | BC031353 | -17 | -6 | + | 7.48 | GGACACGTGAC
 |  | Bnip3l | -55 | -44 | + | 6.73 | CATCACATGGT
 |  | Ctsd | -37 | -26 | + | 5.83 | CCCCACGTGAC
 |  | D6Wsu116e | -24 | -13 | + | 9.88 | GGTCACGTGAG
 |  | D6Wsu116e | -8 | 3 | + | 12.16 | CATCACGTGAC
 |  | D6Wsu116e | 6 | 17 | + | 5.34 | AACCATGTGAT
 |  | Dpp7 | -49 | -38 | + | 11.39 | TATCACGTGAT
 |  | Dpp7 | -18 | -7 | + | 8.17 | GGTCATGTGAC
 |  | Dpp7 | -5 | 6 | + | 8.89 | AATCACATGAC
 |  | E430025E21Rik | -56 | -45 | + | 9.81 | GATCACATGAT
 |  | E430025E21Rik | -20 | -9 | + | 10.74 | GGTCACGTGAC
 |  | E430025E21Rik | 25 | 36 | - | 4.2 | GGCAGCTGACG
 |  | Eml5 | -64 | -53 | + | 5.32 | GGCCACCTGAG
 |  | Fnip1 | -78 | -67 | + | 6.61 | TGCCACGTGAT
 |  | Fnip1 | 15 | 26 | + | 5.03 | TGTCATATGAC
 |  | Gba | -46 | -35 | + | 12.16 | CATCACGTGAC
 |  | Gba | -26 | -15 | + | 9.59 | CATCATGTGAC
 |  | Gga2 | 20 | 31 | + | 8.72 | CGTCACGTGCC
 |  | Grn | -37 | -26 | + | 4.94 | TGTCATATGAT
 |  | Grn | -21 | -10 | + | 8.81 | AATCACATGAT
 |  | [NAME] | -19 | -8 | + | 8.9 | CACCACGTGAC
 |  | [NAME] | -25 | -14 | + | 6.7 | TGCCACGTGAC
 |  | Mfsd1 | -89 | -78 | + | 8.03 | CACCACGTGAG
 |  | Mfsd1 | -73 | -62 | + | 8.32 | [NAME]
 |  | Mfsd1 | -39 | -28 | + | 7.98 | AGTCACGTGAA
 |  | Mfsd1 | -28 | -17 | - | 9.07 | CACACGTGATC
 |  | Pgap1 | 11 | 22 | + | 4.61 | GTTCATGTGCT
 |  | Rnf185 | 15 | 26 | + | 7.42 | CGTCAGGTGAC
 |  | Serac1 | 2 | 13 | + | 8.73 | GGTCACGTGCT
 |  | Sfmbt2 | 12 | 23 | + | 4.95 | GATCAGCTGCG
 |  | Slc12a6 | -78 | -67 | + | 4.75 | GGTCACGTAAC
 |  | Slc12a6 | 24 | 35 | + | 4.66 | CATCAGCTGGC
 |  | Slc36a1 | -44 | -33 | + | 4.72 | CGGCACGTGAC
 |  | Slc36a1 | -16 | -5 | + | 12.16 | CATCACGTGAC
 |  | Snx8 | -3 | 8 | + | 5.89 | AGTCACGTGGG
 |  | Snx8 | 15 | 26 | + | 6.83 | GCTCACATGAC
 |  | Ssfa2 | -13 | -2 | + | 7.43 | GTTCACGTGAA
 |  | Tbccd1 | 23 | 34 | + | 5.93 | GCACACGTGAC
 |  | Wdr7 | 12 | 23 | + | 5.36 | TGTCAGCTGAT
 |  | Wdr81 | 3 | 14 | + | 9.89 | GATCACATGAC
 |  | Wdr81 | 17 | 28 | + | 7.65 | CATCAGCTGAC
 |  | Wipi1 | -27 | -16 | + | 5.92 | CACCACGTGGC
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
4 | V$USF_01 | USF | 12.680238568 | 0.566961681883 | - 170 : 67 | 1.29716451388e-21
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 0610031J06Rik | 8 | 22 | + | 6.98 | GAGTCATGTGACTC
 |  | 2700049A03Rik | -124 | -110 | + | 6.95 | TTACCACGTGGGAA
 |  | 6230409E13Rik | -26 | -12 | + | 10.63 | ACATCACGTGGCCC
 |  | Ankrd12 | -22 | -8 | + | 9.09 | GAGTCACGTGTCCG
 |  | Ankrd12 | -5 | 9 | + | 9.68 | GGGTCACGTGCTCG
 |  | Armcx1 | -32 | -18 | + | 6.71 | CCCTCACGTGAGCC
 |  | Manf | -76 | -62 | + | 7.31 | [NAME]
 |  | Atp6v0b | -36 | -22 | + | 8.81 | GGGTCACGTGGGGT
 |  | Atp6v0b | -18 | -4 | + | 7.39 | GCATCACGTGCGCC
 |  | Atp6v1h | -88 | -74 | + | 6.83 | CGGTCACGTGCGGC
 |  | Atp6v1h | -74 | -60 | + | 6.56 | TGCTCACGTGCCAG
 |  | BC031353 | -18 | -4 | + | 9.63 | GGGACACGTGACCA
 |  | Bnip3l | -56 | -42 | + | 6.93 | TCATCACATGGTCC
 |  | Calr | -165 | -151 | + | 5.21 | ACAACGCGTGGTCG
 |  | Cth | -153 | -139 | + | 6.44 | GTCCCACGTGGGCA
 |  | Ctsd | -38 | -24 | + | 8.36 | CCCCCACGTGACCT
 |  | D6Wsu116e | -168 | -154 | + | 6.77 | AGGCCACGGGACTC
 |  | D6Wsu116e | -25 | -11 | + | 8.25 | AGGTCACGTGAGGA
 |  | D6Wsu116e | -9 | 5 | + | 9.37 | CCATCACGTGACGT
 |  | D6Wsu116e | 5 | 19 | + | 6.2 | GAACCATGTGATTA
 |  | Dpp7 | -50 | -36 | + | 9.82 | CTATCACGTGATGC
 |  | Dpp7 | -19 | -5 | + | 7.51 | CGGTCATGTGACCA
 |  | E430025E21Rik | -57 | -43 | + | 7.48 | CGATCACATGATGC
 |  | E430025E21Rik | -21 | -7 | + | 9.35 | TGGTCACGTGACGG
 |  | Eno2 | 67 | 81 | + | 5.45 | GGGTCACATGCGCC
 |  | Fnip1 | -160 | -146 | + | 6.18 | AGGCCGCGTGACGG
 |  | Fnip1 | -79 | -65 | + | 9.99 | CTGCCACGTGATAC
 |  | Fzd3 | -29 | -15 | + | 5.24 | GCGGCACGTGCGCG
 |  | Gba | -47 | -33 | + | 10.23 | GCATCACGTGACCG
 |  | Gba | -27 | -13 | + | 6.16 | TCATCATGTGACTC
 |  | Gga2 | 19 | 33 | + | 7.66 | CCGTCACGTGCCTC
 |  | Grn | -22 | -8 | + | 7.3 | TAATCACATGATCC
 |  | Herpud1 | 48 | 62 | + | 4.93 | GGGGCGCGTGTCCC
 |  | [NAME] | -20 | -6 | + | 10.01 | CCACCACGTGACCC
 |  | [NAME] | -26 | -12 | + | 9.43 | CTGCCACGTGACAG
 |  | Mfsd1 | -90 | -76 | + | 7.53 | CCACCACGTGAGCA
 |  | Mfsd1 | -74 | -60 | + | 6.96 | CGTTCACGTGAGCA
 |  | Mfsd1 | -40 | -26 | + | 8.4 | AAGTCACGTGAACA
 |  | Mfsd1 | -22 | -8 | + | 7.9 | TGATCACGTGAGTG
 |  | Mfsd11 | 64 | 78 | + | 7.17 | GCTCCACGTGCTCC
 |  | Pfkp | -135 | -121 | + | 4.83 | AGAACGCGTGTCCA
 |  | Pgap1 | 10 | 24 | + | 5.36 | AGTTCATGTGCTAT
 |  | Rab3gap2 | -170 | -156 | + | 9.09 | GAGTCACGTGTCCG
 |  | Rragc | -129 | -115 | + | 8.7 | CGGGCACGTGATAG
 |  | Serac1 | 1 | 15 | + | 9.35 | GGGTCACGTGCTCA
 |  | Slc25a27 | 64 | 78 | + | 6.33 | AAGGCACATGGTCC
 |  | Slc36a1 | -45 | -31 | + | 9.15 | GCGGCACGTGACCT
 |  | Slc36a1 | -17 | -3 | + | 9.71 | GCATCACGTGACAG
 |  | Snx8 | -150 | -136 | + | 9.5 | CGGCCACGTGGTTG
 |  | Snx8 | -4 | 10 | + | 8.51 | AAGTCACGTGGGCG
 |  | Snx8 | 14 | 28 | + | 5.71 | GGCTCACATGACTG
 |  | Ssfa2 | -14 | 0 | + | 7.16 | GGTTCACGTGAAGC
 |  | Tbccd1 | 22 | 36 | + | 7.21 | TGCACACGTGACTT
 |  | Wdr81 | -28 | -14 | + | 5.37 | GAGACACGTGCGGT
 |  | Wdr81 | 2 | 16 | + | 9.01 | AGATCACATGACCC
 |  | Wipi1 | -28 | -14 | + | 9.96 | CCACCACGTGGCCT
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
5 | V$MAX_01 | [NAME] | 14.0375431259 | 0.521428574068 | - 231 : 30 | 3.46045696964e-20
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 2700049A03Rik | -181 | -167 | + | 6.9 | AGAACACGTGGGGG
 |  | 2700049A03Rik | -124 | -110 | + | 6.16 | TTACCACGTGGGAA
 |  | 6230409E13Rik | -26 | -12 | + | 9.35 | ACATCACGTGGCCC
 |  | Ankrd12 | -22 | -8 | + | 9.12 | GAGTCACGTGTCCG
 |  | Ankrd12 | -5 | 9 | + | 8.92 | GGGTCACGTGCTCG
 |  | Manf | -76 | -62 | + | 6.99 | [NAME]
 |  | Atp6v0b | -36 | -22 | + | 6.39 | GGGTCACGTGGGGT
 |  | Atp6v0b | -18 | -4 | + | 5.99 | GCATCACGTGCGCC
 |  | Atp6v1h | -88 | -74 | + | 4.79 | CGGTCACGTGCGGC
 |  | Atp6v1h | -74 | -60 | + | 4.93 | TGCTCACGTGCCAG
 |  | BC031353 | -18 | -4 | + | 9.1 | GGGACACGTGACCA
 |  | Calr | -225 | -211 | + | 8.38 | CAGTCACGTGACCG
 |  | Calr | -165 | -151 | + | 3.86 | ACAACGCGTGGTCG
 |  | Cth | -153 | -139 | + | 4.25 | GTCCCACGTGGGCA
 |  | Ctsd | -38 | -24 | + | 5.91 | CCCCCACGTGACCT
 |  | D6Wsu116e | -168 | -154 | + | 4.05 | AGGCCACGGGACTC
 |  | D6Wsu116e | -25 | -11 | + | 5.81 | AGGTCACGTGAGGA
 |  | D6Wsu116e | -9 | 5 | + | 7.36 | CCATCACGTGACGT
 |  | D6Wsu116e | 5 | 19 | + | 5.09 | GAACCATGTGATTA
 |  | Ddit3 | -201 | -187 | + | 4.05 | AAGCCGCGTGACCC
 |  | Dirc2 | -225 | -211 | + | 8.58 | TAGGCACGTGATGT
 |  | Dpp7 | -50 | -36 | + | 8.1 | CTATCACGTGATGC
 |  | E430025E21Rik | -21 | -7 | + | 7.18 | TGGTCACGTGACGG
 |  | Fnip1 | -79 | -65 | + | 8.11 | CTGCCACGTGATAC
 |  | Fzd3 | -29 | -15 | + | 4.37 | GCGGCACGTGCGCG
 |  | Gba | -47 | -33 | + | 8.16 | GCATCACGTGACCG
 |  | Gga2 | 19 | 33 | + | 7.26 | CCGTCACGTGCCTC
 |  | Grn | -22 | -8 | + | 4.53 | TAATCACATGATCC
 |  | [NAME] | -20 | -6 | + | 8.49 | CCACCACGTGACCC
 |  | Hyou1 | -231 | -217 | + | 4.08 | AGAGCACCTGCTCC
 |  | [NAME] | -227 | -213 | + | 3.9 | ATATGACGTGATTG
 |  | [NAME] | -26 | -12 | + | 6.91 | CTGCCACGTGACAG
 |  | Mfsd1 | -90 | -76 | + | 6 | CCACCACGTGAGCA
 |  | Mfsd1 | -74 | -60 | + | 4.38 | CGTTCACGTGAGCA
 |  | Mfsd1 | -40 | -26 | + | 7.7 | AAGTCACGTGAACA
 |  | Mfsd1 | -22 | -8 | + | 7.09 | TGATCACGTGAGTG
 |  | Pfkp | -135 | -121 | + | 4.47 | AGAACGCGTGTCCA
 |  | Pgm2l1 | -217 | -203 | + | 3.96 | [NAME]
 |  | Rab3gap2 | -170 | -156 | + | 9.12 | GAGTCACGTGTCCG
 |  | Rragc | -143 | -129 | + | 4.04 | TAGTCAGGTGATTC
 |  | Rragc | -129 | -115 | + | 7.66 | CGGGCACGTGATAG
 |  | Serac1 | 1 | 15 | + | 9.14 | GGGTCACGTGCTCA
 |  | Slc24a6 | -226 | -212 | + | 8.73 | AACCCACGTGCTTT
 |  | Slc36a1 | -45 | -31 | + | 7.88 | GCGGCACGTGACCT
 |  | Slc36a1 | -17 | -3 | + | 7.38 | GCATCACGTGACAG
 |  | Smyd3 | 30 | 44 | + | 4.94 | AAAACACGAGACTC
 |  | Snx8 | -150 | -136 | + | 9.75 | CGGCCACGTGGTTG
 |  | Snx8 | -4 | 10 | + | 7.33 | AAGTCACGTGGGCG
 |  | Ssfa2 | -14 | 0 | + | 4.42 | GGTTCACGTGAAGC
 |  | Tbccd1 | 22 | 36 | + | 7.49 | TGCACACGTGACTT
 |  | Wdr81 | -28 | -14 | + | 6.15 | GAGACACGTGCGGT
 |  | Wdr81 | 2 | 16 | + | 4.2 | AGATCACATGACCC
 |  | Wipi1 | -28 | -14 | + | 9.19 | CCACCACGTGGCCT
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
6 | V$USF_C | USF | 10.1668525451 | 0.615829698673 | - 87 : 25 | 7.85042283708e-20
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 0610031J06Rik | 11 | 19 | - | 6.38 | TCATGTGA
 |  | 6230409E13Rik | -23 | -15 | + | 6.92 | TCACGTGG
 |  | Acp6 | -18 | -10 | + | 6.59 | TCCCGTGC
 |  | Ankrd12 | -36 | -28 | + | 6.59 | TCCCGTGC
 |  | Ankrd12 | -19 | -11 | + | 7.84 | TCACGTGT
 |  | Ankrd12 | -2 | 6 | + | 8.24 | TCACGTGC
 |  | Armcx1 | -29 | -21 | + | 7.8 | TCACGTGA
 |  | Manf | -73 | -65 | - | 8.7 | GCACGTGG
 |  | Atp6v0b | -33 | -25 | + | 6.92 | TCACGTGG
 |  | Atp6v0b | -15 | -7 | + | 8.24 | TCACGTGC
 |  | Atp6v1h | -85 | -77 | + | 8.24 | TCACGTGC
 |  | Atp6v1h | -71 | -63 | + | 8.24 | TCACGTGC
 |  | BC031353 | -15 | -7 | + | 7.37 | ACACGTGA
 |  | Ctsa | -25 | -17 | - | 6.6 | TCACGGGG
 |  | Ctsd | -35 | -27 | + | 8.26 | CCACGTGA
 |  | D6Wsu116e | -22 | -14 | + | 7.8 | TCACGTGA
 |  | D6Wsu116e | -6 | 2 | + | 7.8 | TCACGTGA
 |  | Dpp7 | -47 | -39 | + | 7.8 | TCACGTGA
 |  | Dpp7 | -16 | -8 | - | 6.38 | TCATGTGA
 |  | Dpp7 | -3 | 5 | + | 6.38 | TCACATGA
 |  | E430025E21Rik | -54 | -46 | + | 6.38 | TCACATGA
 |  | E430025E21Rik | -18 | -10 | + | 7.8 | TCACGTGA
 |  | Fnip1 | -76 | -68 | + | 8.26 | CCACGTGA
 |  | Fzd3 | -26 | -18 | + | 7.27 | GCACGTGC
 |  | Gba | -44 | -36 | + | 7.8 | TCACGTGA
 |  | Gba | -24 | -16 | - | 6.38 | TCATGTGA
 |  | Gga2 | 22 | 30 | + | 8.24 | TCACGTGC
 |  | Grn | -19 | -11 | + | 6.38 | TCACATGA
 |  | Herpud1 | 16 | 24 | - | 7.05 | GCACGGGG
 |  | [NAME] | -17 | -9 | + | 8.26 | CCACGTGA
 |  | [NAME] | -23 | -15 | + | 8.26 | CCACGTGA
 |  | Mfsd1 | -87 | -79 | + | 8.26 | CCACGTGA
 |  | Mfsd1 | -71 | -63 | + | 7.8 | TCACGTGA
 |  | Mfsd1 | -37 | -29 | + | 7.8 | TCACGTGA
 |  | Mfsd1 | -27 | -19 | + | 7.37 | ACACGTGA
 |  | Mfsd1 | -19 | -11 | + | 7.8 | TCACGTGA
 |  | Pgm2l1 | 11 | 19 | + | 7.27 | GCACGTGC
 |  | Serac1 | 4 | 12 | + | 8.24 | TCACGTGC
 |  | Slc36a1 | -42 | -34 | + | 6.82 | [NAME]
 |  | Slc36a1 | -14 | -6 | + | 7.8 | TCACGTGA
 |  | Snx8 | -1 | 7 | + | 6.92 | TCACGTGG
 |  | Snx8 | 17 | 25 | + | 6.38 | TCACATGA
 |  | Ssfa2 | -11 | -3 | + | 7.8 | TCACGTGA
 |  | Tbccd1 | 17 | 25 | + | 6.4 | CCATGTGC
 |  | Tbccd1 | 25 | 33 | + | 7.37 | ACACGTGA
 |  | Wdr81 | -25 | -17 | + | 7.81 | [NAME]
 |  | Wdr81 | 5 | 13 | + | 6.38 | TCACATGA
 |  | Wipi1 | -25 | -17 | + | 7.37 | CCACGTGG
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
7 | V$NFY_01 | NF-Y | 12.7728840972 | 0.523544444998 | - 147 : 12 | 2.42715096306e-19
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | Ankrd12 | 12 | 28 | + | 9.56 | CGCAGCCAATCGCGGA
 |  | Manf | -122 | -106 | + | 10.89 | AGCAGCCAATGAGGGA
 |  | Manf | -69 | -53 | + | 9.64 | GTGGACCAATGAGGAT
 |  | Manf | -27 | -11 | + | 7.72 | GCACACCAATGGGAAG
 |  | Atp6ap2 | -63 | -47 | - | 9.99 | [NAME]
 |  | Calr | -133 | -117 | + | 6.8 | TGCGACCAATAGAAAT
 |  | Clcn3 | -90 | -74 | + | 9.43 | TCCGACCAATAGGCGC
 |  | Creg1 | -57 | -41 | - | 9.82 | TCTCTGATTGGCTTTC
 |  | Creld2 | -145 | -129 | - | 9.63 | CTTCTCATTGGTGGCT
 |  | Creld2 | -118 | -102 | - | 6.33 | GCCTCAATTGGTCCAC
 |  | Creld2 | -83 | -67 | + | 8.06 | TCCGGCCAATAGAAGC
 |  | Cth | -85 | -69 | + | 9.9 | GCCGACCAATAAGCAG
 |  | Cth | -50 | -34 | - | 10.47 | GCGATGATTGGTTGCG
 |  | Ddit3 | -64 | -48 | - | 8.81 | TTTCTGATTGGTAGGC
 |  | Dnajb11 | -121 | -105 | - | 10.4 | CTTCCCATTGGCCGGC
 |  | Dnajb11 | -85 | -69 | - | 8.52 | TGTCTGATTGGCTTCC
 |  | Dnajb11 | -42 | -26 | - | 12.33 | GCGCTGATTGGCTGCG
 |  | Dnajb11 | 1 | 17 | - | 9.92 | GCGGCGATTGGCCCAC
 |  | Dtna | -72 | -56 | - | 8.06 | CCTGCCATTGGTGAGT
 |  | Eif2ak3 | -146 | -130 | - | 9.97 | TTTCTCATTGGCCGTC
 |  | Eif2ak3 | -91 | -75 | - | 7.23 | AATTTGATTGGTAGGT
 |  | Eif2ak3 | -25 | -9 | + | 9.98 | CGCAACCAATCGCAGA
 |  | Erbb2 | -32 | -16 | + | 5.62 | GGCTCCCAATCACCGG
 |  | Fnip1 | -138 | -122 | + | 9.87 | GCCAGCCAATGGCAGG
 |  | Fnip1 | -57 | -41 | + | 10.69 | GCCAGCCAATCGCCGC
 |  | [NAME] | -61 | -45 | - | 10.35 | GCGTTCATTGGCTGCT
 |  | [NAME] | -29 | -13 | - | 9.41 | GCGTCCATTGGCCGCG
 |  | Gadd45a | -41 | -25 | + | 5.59 | ATAACCCAATGGCCTG
 |  | Gadd45a | -5 | 11 | - | 6.61 | [NAME]
 |  | Gga2 | -1 | 15 | + | 5.22 | CGTGTCCAATAGGGCC
 |  | Herpud1 | -67 | -51 | - | 9.35 | GCGCTGATTGGGCCAC
 |  | Herpud1 | -32 | -16 | + | 8.47 | CTCAGCCAATGGATGG
 |  | Hyou1 | -125 | -109 | + | 6.42 | GTGGCCCAATCCGCAG
 |  | Hyou1 | -24 | -8 | + | 9.17 | GTGGACCAATGGGGTC
 |  | [NAME] | -145 | -129 | + | 8.75 | CATAACCAATAGGAAC
 |  | [NAME] | -92 | -76 | + | 10.5 | CTCAACCAATCATCGG
 |  | [NAME] | -53 | -37 | + | 11.7 | ACTAGCCAATCAGGGC
 |  | Letmd1 | -62 | -46 | + | 6.94 | CGCGTCCAATCCGGGT
 |  | Lmbr1l | -110 | -94 | + | 5.34 | AATGTCCTATCAGCGC
 |  | Lpar4 | -112 | -96 | - | 6.91 | CCAGCGATTGGTGGTG
 |  | Lpar4 | -76 | -60 | - | 5.49 | CAGGGGATTGGGCGGG
 |  | Lpar4 | -37 | -21 | + | 7.46 | CTTATCCAATGAAAAG
 |  | Esyt1 | -146 | -130 | + | 7.7 | CTGGTCCAATCACGGA
 |  | Nans | -32 | -16 | - | 11.12 | [NAME]
 |  | Nans | -2 | 14 | - | 9.83 | CCGCGGATTGGCTGCG
 |  | Nbas | -68 | -52 | + | 8 | CTCTGCCAATCACCAG
 |  | Pdia4 | -100 | -84 | - | 8.04 | CCCGTGATTGGTGGTC
 |  | Pdia4 | -80 | -64 | + | 11.11 | CACAGCCAATCAGAAG
 |  | Pdia6 | -93 | -77 | - | 6.17 | CTTTCAATTGGCCACG
 |  | Pdia6 | -59 | -43 | + | 8.25 | AGAGACCAATGAAAGG
 |  | Pfkp | -40 | -24 | - | 7.59 | CAGCCCATTGGCGCTC
 |  | Rragc | -80 | -64 | + | 8.58 | CCCAGCCAATAATAAA
 |  | Rragc | -51 | -35 | + | 8.8 | GCGGCCCAATCGGAGC
 |  | Sdf2l1 | -68 | -52 | + | 6.34 | ACGGTCCAATAGCAGT
 |  | Sdf2l1 | -32 | -16 | - | 8.89 | CAGACGATTGGCTGCC
 |  | Sdf2l1 | 2 | 18 | - | 5.6 | AGCTGGATTGGCCGCT
 |  | Slc25a27 | -76 | -60 | + | 12.3 | ACCAGCCAATCAGAGA
 |  | Syvn1 | -75 | -59 | - | 10.15 | TTTCTCATTGGTCCGC
 |  | Syvn1 | -49 | -33 | + | 11.36 | CGCAACCAATCGGCGG
 |  | Tbccd1 | -60 | -44 | + | 7.91 | GTCCACCAATCGCGAG
 |  | Tbccd1 | -31 | -15 | + | 4.76 | TCCGACCAATTGCTTG
 |  | Tet1 | -54 | -38 | + | 6.92 | AAGGACCAATGACACT
 |  | Wipi1 | 7 | 23 | + | 8.41 | TTCGGCCAATGGCAAA
 |  | Zfp691 | -146 | -130 | - | 7.55 | ATGTTTATTGGCCGTC
 |  | Zfp691 | -100 | -84 | + | 5.77 | TATAGCCAATAGAGAG
 |  | Zfp691 | -71 | -55 | + | 7.36 | AGGATCCAATCCGAAC
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
8 | V$SP1_01 | Sp1 | 8.90287601109 | 0.718181824684 | - 124 : 13 | 4.15334454196e-19
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 0610031J06Rik | -23 | -13 | - | 6.41 | GGCCCGCCCT
 |  | Fam189b | -19 | -9 | - | 6.94 | ACCACACCCC
 |  | Fam189b | 13 | 23 | - | 6.93 | ACCATCCCCC
 |  | 6230409E13Rik | -88 | -78 | + | 8.06 | GGGGCAGGGC
 |  | 6230409E13Rik | -61 | -51 | - | 7.22 | ATCCCGCCTC
 |  | Arhgap42 | -60 | -50 | + | 7.91 | GGGGCGGGTT
 |  | Ralgapa2 | -100 | -90 | + | 8.75 | GGGGCGGGGC
 |  | Ralgapa2 | -74 | -64 | - | 6.68 | ACACCGCCTT
 |  | Ralgapa2 | -61 | -51 | - | 8.75 | GCCCCGCCCC
 |  | Ralgapa2 | -42 | -32 | - | 7.5 | GGCCCGCCCC
 |  | Abca5 | -117 | -107 | - | 8.75 | GCCCCGCCCC
 |  | Abca5 | -102 | -92 | - | 8.75 | GCCCCGCCCC
 |  | Abca5 | -46 | -36 | - | 7.66 | GCCCCGCCCT
 |  | Abca5 | -24 | -14 | + | 7.9 | GGGGCGGGCA
 |  | Abca5 | -13 | -3 | + | 5.98 | GGGGCGTGTC
 |  | Adamts9 | -89 | -79 | + | 6.37 | [NAME]
 |  | Ak4 | -41 | -31 | + | 6.82 | GGGGCGCGGC
 |  | Ankrd12 | -65 | -55 | + | 8.75 | GGGGCGGGGC
 |  | Armcx1 | -119 | -109 | + | 7.38 | GTGGCGGGGA
 |  | Manf | -112 | -102 | + | 7.08 | GAGGGAGGGT
 |  | [NAME] | -124 | -114 | - | 7.22 | AGCCCCCCCC
 |  | [NAME] | -114 | -104 | - | 6.68 | GCCCCCCCTC
 |  | Atp6v0b | 12 | 22 | + | 7.5 | GGGGCGGGCC
 |  | Bnip3l | -107 | -97 | - | 5.98 | GTCACGCCCC
 |  | Bnip3l | -82 | -72 | - | 6.98 | ACCCCGCCGT
 |  | Calr | -11 | -1 | + | 8.59 | GGGGCGGGCT
 |  | Clcn3 | -120 | -110 | - | 6.81 | GCCACGCCCT
 |  | Cpeb2 | -53 | -43 | + | 6.97 | TAGGCGGGGC
 |  | Creg1 | -81 | -71 | - | 7.9 | GCCACGCCCC
 |  | Creg1 | 13 | 23 | + | 7.37 | TGGGCAGGGA
 |  | Creld2 | -52 | -42 | + | 7.66 | TGGGCGGGGC
 |  | Cth | -122 | -112 | + | 8.06 | GAGGCGGGGC
 |  | Cth | -26 | -16 | - | 6 | TCCCCACCCT
 |  | Ctsd | -100 | -90 | + | 6.69 | GGGGCGGAGC
 |  | Ctsd | -88 | -78 | + | 6.14 | AGGGCAGGAT
 |  | Ddit3 | -91 | -81 | + | 6 | GAGGCGGAGC
 |  | Ddit3 | -42 | -32 | - | 9.15 | ACCCTGCCCC
 |  | Dirc2 | -59 | -49 | - | 9.15 | ACCCCGCCTC
 |  | Dpp7 | -35 | -25 | - | 6.98 | GCCCCGCCCG
 |  | Eml5 | -71 | -61 | + | 8.75 | GGGGCGGGGC
 |  | Eml5 | -54 | -44 | + | 6 | GAGGTGGGGC
 |  | Eml5 | -32 | -22 | + | 8.75 | GGGGCGGGGC
 |  | Fnip1 | -120 | -110 | - | 8.06 | GCCCCGCCTC
 |  | Fnip1 | -101 | -91 | - | 9.84 | [NAME]
 |  | Fnip1 | -27 | -17 | - | 6.69 | GCTCCGCCCC
 |  | [NAME] | -124 | -114 | - | 6.01 | ACCCCACCGC
 |  | [NAME] | 1 | 11 | + | 8.75 | GGGGCGGGGC
 |  | Fyn | -89 | -79 | + | 7.08 | GGGGGAGGGA
 |  | Gadd45a | -116 | -106 | - | 6.69 | GCTCCGCCCC
 |  | Gga2 | -27 | -17 | + | 6.82 | [NAME]
 |  | Gga2 | 11 | 21 | - | 7.5 | GGCCCGCCCC
 |  | Gpt2 | -34 | -24 | + | 7.09 | GAGGCGGAGT
 |  | Grn | -51 | -41 | + | 7.9 | GAGGCGGGCT
 |  | Herpud1 | -95 | -85 | - | 7.9 | AGCCCGCCTC
 |  | [NAME] | -78 | -68 | - | 6.81 | [NAME]
 |  | Hyou1 | -56 | -46 | + | 8.75 | GGGGCGGGGC
 |  | Hyou1 | -40 | -30 | + | 6.82 | GGGGCGGGTC
 |  | Hyou1 | 7 | 17 | + | 6.28 | TGGGCGGTGC
 |  | [NAME] | -112 | -102 | - | 6.97 | GCCCCGCCTA
 |  | [NAME] | -60 | -50 | + | 6.82 | GGGGCGGGTC
 |  | [NAME] | -83 | -73 | + | 8.75 | GGGGCGGGGC
 |  | Letmd1 | -47 | -37 | - | 7.38 | TCCCCGCCCG
 |  | Lmbr1l | -37 | -27 | - | 6.82 | AACCCGCCCA
 |  | Lpar4 | -68 | -58 | + | 6.82 | TGGGCGGGAT
 |  | Map3k1 | -121 | -111 | + | 6.14 | GAGGCGCGGC
 |  | Map3k1 | -30 | -20 | - | 9.15 | TCCCCGCCCC
 |  | Map3k1 | -19 | -9 | - | 7.08 | TCCCTCCCCC
 |  | Esyt1 | -68 | -58 | + | 8.75 | GGGGCGGGGC
 |  | Mfsd1 | -56 | -46 | + | 7.22 | GAGGCGTGGC
 |  | Mfsd1 | 9 | 19 | - | 6.28 | GCCCTGCCTT
 |  | Mfsd11 | -59 | -49 | - | 6.82 | GTCCCGCCCC
 |  | Mfsd11 | -45 | -35 | - | 6.98 | GCCCCGCCGC
 |  | Mfsd11 | 1 | 11 | + | 9.15 | GAGGCGGGGT
 |  | Mospd1 | -120 | -110 | - | 8.75 | GCCCCGCCCC
 |  | Mospd1 | -103 | -93 | - | 9.84 | [NAME]
 |  | Mospd1 | -68 | -58 | - | 7.37 | ACCCACCCCC
 |  | Mospd1 | -39 | -29 | + | 8.06 | TGGGCGGGGA
 |  | Mpp5 | 7 | 17 | + | 9.15 | GGGGCGGGGA
 |  | Ppp1r15a | -27 | -17 | - | 9.15 | ACCCCGCCTC
 |  | Nans | -74 | -64 | + | 8.75 | GGGGCGGGGC
 |  | Pdia4 | 11 | 21 | + | 8.75 | GGGGCGGGGC
 |  | Pdia6 | -18 | -8 | - | 6.81 | [NAME]
 |  | Pfkp | -73 | -63 | - | 7.66 | GCCCCGCCCT
 |  | Pfkp | -25 | -15 | + | 6.98 | CGGGCGGGGC
 |  | Pfkp | 5 | 15 | + | 6.29 | CAGGCGGGGC
 |  | Pgm2l1 | -92 | -82 | - | 6.81 | ACCAAGCCCT
 |  | Pgm2l1 | -30 | -20 | + | 7.9 | GAGGCGGGCT
 |  | Pi4k2b | -111 | -101 | - | 6 | GCCCTACCCC
 |  | Pi4k2b | -101 | -91 | - | 8.75 | GCCCCGCCCC
 |  | Pi4k2b | -76 | -66 | - | 6.69 | GCCCCACCCC
 |  | Pi4k2b | -23 | -13 | + | 8.06 | GAGGCGGGGC
 |  | Pi4k2b | -1 | 9 | + | 6.81 | TGGGCGTGGC
 |  | Plekhb2 | -4 | 6 | + | 7.08 | GAGGCGGTGA
 |  | Ppp2r5b | -67 | -57 | + | 6 | AGGGTGGGGA
 |  | Ppp2r5b | -21 | -11 | - | 6.13 | AGCCCCCCCT
 |  | Ppp2r5b | 11 | 21 | + | 7.08 | GAGGGGGGGA
 |  | Rab3gap2 | -84 | -74 | - | 6.68 | ACCCTCCCCT
 |  | Rab3gap2 | -42 | -32 | - | 9.15 | TCCCCGCCCC
 |  | Rragc | -86 | -76 | - | 7.5 | AGCCCGCCCA
 |  | Rragc | -27 | -17 | + | 6.41 | TGGGCGGGCC
 |  | Samd8 | -16 | -6 | - | 6.82 | GACCCGCCCC
 |  | Samd8 | 5 | 15 | - | 8.06 | GCCCCGCCTC
 |  | Sdf2l1 | -86 | -76 | + | 6.69 | GGGGTGGGGC
 |  | Serac1 | -38 | -28 | + | 7.5 | GGGGCGGGCC
 |  | Serac1 | -25 | -15 | + | 8.75 | AGGGCGGGGT
 |  | Serac1 | -5 | 5 | + | 9.15 | GAGGCGGGGT
 |  | Sfmbt2 | -109 | -99 | + | 6.39 | GAGGGAGGGA
 |  | Slc12a6 | -109 | -99 | - | 6.82 | AGCCCGCCGC
 |  | Slc24a6 | -106 | -96 | + | 6.68 | GAGGCTGTGT
 |  | Slc24a6 | -85 | -75 | + | 8.75 | GGGGCGGGGC
 |  | Slc24a6 | -55 | -45 | + | 8.06 | TGGGCGGGGA
 |  | Slc24a6 | -35 | -25 | + | 6.14 | CGGGCGTGGC
 |  | Slc24a6 | -13 | -3 | + | 6 | TAGGCGGAGT
 |  | Slc24a6 | 7 | 17 | + | 7.9 | GGGGCGTGGC
 |  | Smyd3 | -81 | -71 | - | 6.4 | ACACCACCCC
 |  | Smyd3 | -18 | -8 | - | 7.09 | TCTCCGCCCC
 |  | Snx30 | -93 | -83 | + | 7.66 | TGGGCGGGGC
 |  | Snx30 | -64 | -54 | - | 6.69 | GCTCCGCCCC
 |  | Snx30 | -42 | -32 | - | 5.99 | GCCCTCCCTC
 |  | Snx30 | -11 | -1 | + | 8.75 | GGGGCGGGGC
 |  | Snx30 | 11 | 21 | + | 6.14 | GCGGCGTGGC
 |  | Snx8 | -118 | -108 | + | 8.99 | GGGGCGTGGT
 |  | Snx8 | -86 | -76 | + | 7.9 | GGGGCGTGGC
 |  | Snx8 | -66 | -56 | + | 6.81 | TGGGCGTGGC
 |  | Snx8 | -35 | -25 | + | 7.66 | TGGGCGGGGC
 |  | Sord | -19 | -9 | - | 9.15 | ACCCCGCCTC
 |  | Sord | 10 | 20 | - | 8.75 | GCCCCGCCCC
 |  | Ssfa2 | -117 | -107 | + | 8.06 | GGGGCAGGGC
 |  | Strbp | -44 | -34 | - | 7.22 | TGCCTGCCCC
 |  | Tet1 | 8 | 18 | - | 6.82 | GTCCCGCCCC
 |  | Vps13a | -117 | -107 | + | 6.41 | AGGGCGGGCC
 |  | Vps13a | -69 | -59 | - | 6.14 | GCCGCGCCTC
 |  | Vps13a | -46 | -36 | - | 5.98 | GTCACGCCCC
 |  | Wdr7 | -119 | -109 | - | 6.54 | ACCACGCCTG
 |  | Wdr81 | -73 | -63 | + | 7.09 | GGGGTGGGGA
 |  | Wdr81 | -54 | -44 | + | 7.22 | GAGGCGGGAT
 |  | Wipi1 | -96 | -86 | + | 6.13 | AAGGCAGGCT
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
9 | V$NMYC_01 | N-Myc | 10.7086491854 | 0.604166666046 | - 230 : 23 | 8.68202971448e-19
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 2700049A03Rik | -180 | -168 | + | 6.45 | GAACACGTGGGG
 |  | 2700049A03Rik | -123 | -111 | + | 8.22 | [NAME]
 |  | 6230409E13Rik | -25 | -13 | + | 7.62 | CATCACGTGGCC
 |  | 6230409E13Rik | -11 | 1 | + | 6.41 | TTCCACGCGCTG
 |  | Arhgap42 | -81 | -69 | + | 5.9 | GCCCGCGTGCGC
 |  | Ankrd12 | -180 | -168 | + | 6.84 | TCCCACGCGGCT
 |  | Ankrd12 | -21 | -9 | + | 7.29 | AGTCACGTGTCC
 |  | Ankrd12 | -4 | 8 | + | 6.15 | GGTCACGTGCTC
 |  | Armcx1 | -31 | -19 | + | 6.59 | CCTCACGTGAGC
 |  | Manf | -75 | -63 | + | 6.33 | GGGCACGTGGAC
 |  | [NAME] | -144 | -132 | - | 6.89 | [NAME]
 |  | [NAME] | -4 | 8 | + | 6.81 | TCACACGCGCCC
 |  | Atp6ap2 | -83 | -71 | + | 6.77 | TCGCTCGTGTAG
 |  | Atp6v0b | -35 | -23 | - | 9.11 | GGTCACGTGGGG
 |  | Atp6v0b | -17 | -5 | + | 6.79 | CATCACGTGCGC
 |  | Atp6v1h | -87 | -75 | - | 7.92 | GGTCACGTGCGG
 |  | Atp6v1h | -73 | -61 | + | 7.74 | GCTCACGTGCCA
 |  | BC031353 | -17 | -5 | + | 6.81 | GGACACGTGACC
 |  | Calr | -224 | -212 | + | 6.39 | AGTCACGTGACC
 |  | Calr | -164 | -152 | - | 5.85 | CAACGCGTGGTC
 |  | Cpox | -43 | -31 | + | 5.9 | GCCCGCGTGCGA
 |  | Creld2 | -225 | -213 | + | 6.17 | CCACTCGTGGAG
 |  | Cth | -152 | -140 | + | 8.62 | TCCCACGTGGGC
 |  | Ctsd | -37 | -25 | + | 9.11 | CCCCACGTGACC
 |  | D6Wsu116e | -24 | -12 | - | 7.74 | GGTCACGTGAGG
 |  | D6Wsu116e | -8 | 4 | + | 7.34 | CATCACGTGACG
 |  | Ddit3 | -200 | -188 | + | 5.7 | AGCCGCGTGACC
 |  | Dirc2 | -224 | -212 | + | 5.88 | AGGCACGTGATG
 |  | Dnajb11 | -19 | -7 | - | 6.49 | GGCCGCGTGTGA
 |  | Dock11 | -230 | -218 | + | 7.43 | TCCCGCGTGACC
 |  | Dpp7 | -49 | -37 | + | 7.02 | TATCACGTGATG
 |  | E430025E21Rik | -20 | -8 | + | 6.24 | GGTCACGTGACG
 |  | Fnip1 | -78 | -66 | + | 7.89 | TGCCACGTGATA
 |  | Fzd3 | -28 | -16 | + | 6.46 | CGGCACGTGCGC
 |  | Gba | -46 | -34 | + | 7.34 | CATCACGTGACC
 |  | Gga2 | 20 | 32 | + | 6.99 | CGTCACGTGCCT
 |  | Grn | -164 | -152 | + | 5.86 | GAACGCGTGCCC
 |  | [NAME] | -19 | -7 | + | 8.71 | CACCACGTGACC
 |  | Hyou1 | -220 | -208 | + | 6.14 | TCCCACGCGGGG
 |  | [NAME] | -25 | -13 | + | 8.58 | TGCCACGTGACA
 |  | Map3k1 | -7 | 5 | - | 6.39 | AGGCACGAGCGA
 |  | Mfsd1 | -89 | -77 | + | 7.56 | CACCACGTGAGC
 |  | Mfsd1 | -73 | -61 | - | 6.77 | GTTCACGTGAGC
 |  | Mfsd1 | -39 | -27 | + | 6.02 | AGTCACGTGAAC
 |  | Mfsd1 | -21 | -9 | - | 6.61 | GATCACGTGAGT
 |  | Mpp5 | -206 | -194 | + | 6.08 | CCCCACGCGCGC
 |  | Pfkp | -134 | -122 | + | 6.17 | GAACGCGTGTCC
 |  | Pgm2l1 | 9 | 21 | + | 6.77 | GCGCACGTGCGA
 |  | Rab3gap2 | -169 | -157 | + | 7.29 | AGTCACGTGTCC
 |  | Rnf185 | -191 | -179 | - | 6.08 | CTTCACGCGGGC
 |  | Rragc | -177 | -165 | + | 6.55 | CTCCTCGTGACG
 |  | Rragc | -128 | -116 | + | 5.73 | [NAME]
 |  | Serac1 | 2 | 14 | + | 6.15 | GGTCACGTGCTC
 |  | Slc24a6 | -225 | -213 | + | 8.13 | ACCCACGTGCTT
 |  | Slc36a1 | -44 | -32 | + | 7.01 | CGGCACGTGACC
 |  | Slc36a1 | -16 | -4 | + | 7.34 | CATCACGTGACA
 |  | Snx8 | -149 | -137 | + | 6.76 | GGCCACGTGGTT
 |  | Snx8 | -3 | 9 | - | 8.07 | AGTCACGTGGGC
 |  | Ssfa2 | -13 | -1 | + | 6.26 | GTTCACGTGAAG
 |  | Tbccd1 | 23 | 35 | + | 7.27 | GCACACGTGACT
 |  | Vps13a | -39 | -27 | + | 6.86 | CCCCACGCGCAG
 |  | Vps13a | -17 | -5 | - | 5.98 | GCACGCGTGGTG
 |  | Wdr81 | -27 | -15 | + | 6.42 | AGACACGTGCGG
 |  | Wipi1 | -27 | -15 | + | 8.99 | CACCACGTGGCC
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
10 | V$MYCMAX_02 | c-Myc/Max | 11.2586655756 | 0.503284078091 | - 89 : 39 | 2.31233611886e-18
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 6230409E13Rik | -25 | -13 | + | 8.12 | CATCACGTGGCC
 |  | Abca5 | -65 | -53 | + | 5.6 | GAGCACGCGCAT
 |  | Ankrd12 | -21 | -9 | + | 5.91 | AGTCACGTGTCC
 |  | Ankrd12 | -4 | 8 | - | 8.35 | GGTCACGTGCTC
 |  | Armcx1 | -31 | -19 | + | 5.82 | CCTCACGTGAGC
 |  | Manf | -75 | -63 | - | 6.07 | GGGCACGTGGAC
 |  | Manf | -52 | -40 | + | 5.53 | CAGCATATGGGT
 |  | Atp6v0b | -35 | -23 | - | 6.95 | GGTCACGTGGGG
 |  | Atp6v0b | -17 | -5 | + | 6.91 | CATCACGTGCGC
 |  | Atp6v1h | -87 | -75 | - | 6.75 | GGTCACGTGCGG
 |  | Atp6v1h | -73 | -61 | + | 6.43 | GCTCACGTGCCA
 |  | BC031353 | -17 | -5 | - | 5.58 | GGACACGTGACC
 |  | Bnip3l | -55 | -43 | + | 6.64 | CATCACATGGTC
 |  | Ctsd | -37 | -25 | + | 6.95 | CCCCACGTGACC
 |  | D6Wsu116e | -24 | -12 | - | 6.35 | GGTCACGTGAGG
 |  | D6Wsu116e | 6 | 18 | + | 6.53 | AACCATGTGATT
 |  | Dpp7 | -49 | -37 | - | 8.83 | TATCACGTGATG
 |  | Dpp7 | -5 | 7 | + | 8.72 | AATCACATGACA
 |  | Eno2 | -65 | -53 | - | 5.82 | ATCCGTGTGCTT
 |  | Fnip1 | -78 | -66 | + | 6.81 | TGCCACGTGATA
 |  | Gba | -46 | -34 | + | 8.28 | CATCACGTGACC
 |  | Gba | -26 | -14 | + | 6.61 | CATCATGTGACT
 |  | Grn | -37 | -25 | - | 6.15 | TGTCATATGATT
 |  | Grn | -21 | -9 | + | 6.8 | AATCACATGATC
 |  | [NAME] | -19 | -7 | + | 8.88 | CACCACGTGACC
 |  | [NAME] | -25 | -13 | + | 7.49 | TGCCACGTGACA
 |  | Lmbr1l | 39 | 51 | - | 7.96 | TGAAACGTGCTT
 |  | Mfsd1 | -89 | -77 | + | 8.34 | CACCACGTGAGC
 |  | Mfsd1 | -73 | -61 | + | 5.77 | GTTCACGTGAGC
 |  | Mfsd1 | -39 | -27 | - | 7.21 | AGTCACGTGAAC
 |  | Mfsd1 | -21 | -9 | + | 8.32 | GATCACGTGAGT
 |  | Ppp1r15a | 21 | 33 | - | 5.92 | AGCCGCGTGGAC
 |  | Pgap1 | 11 | 23 | - | 7.15 | GTTCATGTGCTA
 |  | Pgm2l1 | 9 | 21 | + | 6.29 | GCGCACGTGCGA
 |  | Serac1 | 2 | 14 | - | 8.35 | GGTCACGTGCTC
 |  | Slc36a1 | -44 | -32 | + | 5.7 | CGGCACGTGACC
 |  | Slc36a1 | -16 | -4 | + | 9.52 | CATCACGTGACA
 |  | Smyd3 | 31 | 43 | + | 6.09 | AAACACGAGACT
 |  | Snx8 | -3 | 9 | - | 7.53 | AGTCACGTGGGC
 |  | Snx8 | 15 | 27 | + | 6.13 | GCTCACATGACT
 |  | Ssfa2 | -13 | -1 | - | 5.55 | GTTCACGTGAAG
 |  | Tbccd1 | 23 | 35 | + | 6.24 | GCACACGTGACT
 |  | Vps13a | -17 | -5 | - | 7.22 | GCACGCGTGGTG
 |  | Wdr81 | -27 | -15 | - | 8.27 | AGACACGTGCGG
 |  | Wdr81 | 3 | 15 | + | 7.15 | GATCACATGACC
 |  | Wipi1 | -27 | -15 | + | 8.73 | CACCACGTGGCC
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
11 | V$USF_02 | USF | 8.97798654955 | 0.501471074374 | - 231 : 30 | 3.67777732695e-18
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 0610031J06Rik | 8 | 22 | + | 7.27 | GAGTCATGTGACTC
 |  | 2700049A03Rik | -181 | -167 | + | 6.19 | AGAACACGTGGGGG
 |  | 2700049A03Rik | -124 | -110 | + | 7.83 | TTACCACGTGGGAA
 |  | 6230409E13Rik | -26 | -12 | + | 8.08 | ACATCACGTGGCCC
 |  | Abca5 | -191 | -177 | + | 6.31 | TGAGCACCTGAGCT
 |  | Ankrd12 | -22 | -8 | + | 7.69 | GAGTCACGTGTCCG
 |  | Ankrd12 | -5 | 9 | + | 7.43 | GGGTCACGTGCTCG
 |  | Atp6v0b | -36 | -22 | + | 6.74 | GGGTCACGTGGGGT
 |  | Atp6v0b | -18 | -4 | + | 5.79 | GCATCACGTGCGCC
 |  | Atp6v1h | -74 | -60 | + | 6.66 | TGCTCACGTGCCAG
 |  | BC031353 | -18 | -4 | + | 8.38 | GGGACACGTGACCA
 |  | Bnip3l | -56 | -42 | + | 6.92 | TCATCACATGGTCC
 |  | Calr | -225 | -211 | + | 7.95 | CAGTCACGTGACCG
 |  | Clcn3 | -184 | -170 | + | 6.61 | AGAGCAGGTGGCAC
 |  | Cth | -153 | -139 | + | 5.92 | GTCCCACGTGGGCA
 |  | Ctsd | -38 | -24 | + | 6.5 | CCCCCACGTGACCT
 |  | D6Wsu116e | -25 | -11 | + | 7.63 | AGGTCACGTGAGGA
 |  | D6Wsu116e | -9 | 5 | + | 7.46 | CCATCACGTGACGT
 |  | D6Wsu116e | 5 | 19 | + | 7.8 | GAACCATGTGATTA
 |  | Dirc2 | -225 | -211 | + | 8.12 | TAGGCACGTGATGT
 |  | Dpp7 | -50 | -36 | + | 7.85 | CTATCACGTGATGC
 |  | Dpp7 | -19 | -5 | + | 7.4 | CGGTCATGTGACCA
 |  | E430025E21Rik | -57 | -43 | + | 6.55 | CGATCACATGATGC
 |  | E430025E21Rik | -21 | -7 | + | 7.89 | TGGTCACGTGACGG
 |  | Fnip1 | -79 | -65 | + | 8.08 | CTGCCACGTGATAC
 |  | Gba | -47 | -33 | + | 7.58 | GCATCACGTGACCG
 |  | Gba | -27 | -13 | + | 7.17 | TCATCATGTGACTC
 |  | Gga2 | 19 | 33 | + | 6.54 | CCGTCACGTGCCTC
 |  | Grn | -38 | -24 | + | 6.75 | TTGTCATATGATTC
 |  | Grn | -22 | -8 | + | 8.12 | TAATCACATGATCC
 |  | [NAME] | -108 | -94 | + | 6.87 | GAGTCATATGATTT
 |  | [NAME] | -20 | -6 | + | 7.2 | CCACCACGTGACCC
 |  | Hyou1 | -231 | -217 | + | 6.23 | AGAGCACCTGCTCC
 |  | [NAME] | -26 | -12 | + | 7.63 | CTGCCACGTGACAG
 |  | Mfsd1 | -184 | -170 | + | 6.94 | AAATCAGATGTTAA
 |  | Mfsd1 | -90 | -76 | + | 6.58 | CCACCACGTGAGCA
 |  | Mfsd1 | -40 | -26 | + | 7.24 | AAGTCACGTGAACA
 |  | Mfsd1 | -22 | -8 | + | 7.77 | TGATCACGTGAGTG
 |  | Mospd1 | -141 | -127 | + | 7.5 | AAGCCAGGTGGCAA
 |  | Plekhb2 | -37 | -23 | + | 5.95 | GTGGCACCTGCCTT
 |  | Rab3gap2 | -170 | -156 | + | 7.69 | GAGTCACGTGTCCG
 |  | Rnf185 | 14 | 28 | + | 6.76 | GCGTCAGGTGACCA
 |  | Rragc | -143 | -129 | + | 7.84 | TAGTCAGGTGATTC
 |  | Rragc | -129 | -115 | + | 7.25 | CGGGCACGTGATAG
 |  | Serac1 | 1 | 15 | + | 8.18 | GGGTCACGTGCTCA
 |  | Slc24a6 | -226 | -212 | + | 7.55 | AACCCACGTGCTTT
 |  | Slc36a1 | -45 | -31 | + | 7.35 | GCGGCACGTGACCT
 |  | Slc36a1 | -17 | -3 | + | 7.65 | GCATCACGTGACAG
 |  | Smyd3 | 30 | 44 | + | 6.03 | AAAACACGAGACTC
 |  | Snx8 | -150 | -136 | + | 7.39 | CGGCCACGTGGTTG
 |  | Snx8 | -4 | 10 | + | 7.31 | AAGTCACGTGGGCG
 |  | Snx8 | 14 | 28 | + | 5.83 | GGCTCACATGACTG
 |  | Strbp | -209 | -195 | + | 5.89 | ATGCCATCTGCTCA
 |  | Tbccd1 | 22 | 36 | + | 7.94 | TGCACACGTGACTT
 |  | Tet1 | -113 | -99 | + | 7.07 | AACTCAGGTGACCA
 |  | Wdr7 | 11 | 25 | + | 6.59 | GTGTCAGCTGATTT
 |  | Wdr81 | -28 | -14 | + | 5.78 | GAGACACGTGCGGT
 |  | Wdr81 | 2 | 16 | + | 7.98 | AGATCACATGACCC
 |  | Wipi1 | -28 | -14 | + | 7.45 | CCACCACGTGGCCT
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
12 | V$ARNT_01 | Arnt | 12.9757054252 | 0.556930694031 | - 232 : 21 | 5.03101049379e-18
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 2700049A03Rik | -182 | -166 | + | 8.98 | GAGAACACGTGGGGGC
 |  | 2700049A03Rik | -125 | -109 | + | 6.97 | GTTACCACGTGGGAAA
 |  | 6230409E13Rik | -27 | -11 | + | 5.61 | GACATCACGTGGCCCT
 |  | Abca5 | -67 | -51 | - | 5.47 | AGGAGCACGCGCATTA
 |  | Acp6 | -180 | -164 | + | 7.26 | AGTGGAACGTGGGAGG
 |  | Ankrd12 | -182 | -166 | - | 5.8 | [NAME]
 |  | Ankrd12 | -23 | -7 | + | 11.56 | GGAGTCACGTGTCCGC
 |  | Ankrd12 | -6 | 10 | + | 10.61 | CGGGTCACGTGCTCGC
 |  | Armcx1 | -33 | -17 | - | 6.74 | CCCCTCACGTGAGCCG
 |  | Manf | -107 | -91 | + | 4.47 | AGGGTAGCGTGGAGCC
 |  | Manf | -77 | -61 | + | 7.32 | CTGGGCACGTGGACCA
 |  | Atp6ap2 | -133 | -117 | - | 4.41 | TTCATCACGTTCGCCT
 |  | Atp6v0b | -37 | -21 | + | 9.83 | GGGGTCACGTGGGGTC
 |  | Atp6v0b | -19 | -3 | - | 6.47 | CGCATCACGTGCGCCG
 |  | Atp6v1h | -89 | -73 | + | 4.59 | GCGGTCACGTGCGGCT
 |  | BC031353 | -19 | -3 | + | 7.55 | TGGGACACGTGACCAG
 |  | Calr | -226 | -210 | + | 5.3 | TCAGTCACGTGACCGT
 |  | Clcn3 | -204 | -188 | + | 7.44 | GGGAGAACGTGAGCGA
 |  | Clcn3 | -185 | -169 | - | 5.28 | [NAME]
 |  | Cth | -154 | -138 | + | 5.92 | [NAME]
 |  | Ctsd | -39 | -23 | - | 7.72 | [NAME]
 |  | D6Wsu116e | -169 | -153 | - | 4.55 | TAGGCCACGGGACTCC
 |  | D6Wsu116e | -26 | -10 | + | 7.42 | CAGGTCACGTGAGGAC
 |  | D6Wsu116e | -10 | 6 | - | 4.69 | ACCATCACGTGACGTG
 |  | Ddit3 | -202 | -186 | + | 6.3 | GAAGCCGCGTGACCCA
 |  | Dirc2 | -226 | -210 | + | 8.42 | TTAGGCACGTGATGTA
 |  | Dock11 | -232 | -216 | + | 4.5 | CTTCCCGCGTGACCCT
 |  | Dpp7 | -51 | -35 | + | 4.74 | ACTATCACGTGATGCT
 |  | E430025E21Rik | -22 | -6 | + | 9.59 | TTGGTCACGTGACGGG
 |  | Fnip1 | -161 | -145 | + | 6.2 | GAGGCCGCGTGACGGA
 |  | Fnip1 | -80 | -64 | + | 4.39 | GCTGCCACGTGATACG
 |  | Fzd3 | -30 | -14 | + | 4.54 | CGCGGCACGTGCGCGC
 |  | Gba | -48 | -32 | + | 4.96 | TGCATCACGTGACCGG
 |  | Gga2 | 18 | 34 | - | 9.71 | CCCGTCACGTGCCTCT
 |  | Grn | -166 | -150 | + | 6.57 | TTGAACGCGTGCCCTC
 |  | Herpud1 | -59 | -43 | - | 5.09 | TGGGCCACGTTGGACA
 |  | [NAME] | -21 | -5 | - | 9.72 | GCCACCACGTGACCCG
 |  | Hyou1 | -232 | -216 | + | 4.5 | GAGAGCACCTGCTCCC
 |  | [NAME] | -27 | -11 | + | 5.08 | GCTGCCACGTGACAGG
 |  | Mfsd1 | -91 | -75 | - | 8.37 | GCCACCACGTGAGCAA
 |  | Mfsd1 | -75 | -59 | - | 8.87 | CCGTTCACGTGAGCAC
 |  | Mfsd1 | -41 | -25 | + | 8.21 | CAAGTCACGTGAACAC
 |  | Mfsd1 | -23 | -7 | + | 9.78 | GTGATCACGTGAGTGC
 |  | Mpp5 | -98 | -82 | + | 6.49 | AGGGGCGCGTGCGCGG
 |  | Ppp1r15a | 19 | 35 | + | 5.37 | AAAGCCGCGTGGACGA
 |  | Pgm2l1 | 7 | 23 | + | 6.86 | AGGCGCACGTGCGAGT
 |  | Plekhb2 | -160 | -144 | - | 4.85 | GCTGTCACGCTTTTCT
 |  | Plekhb2 | -38 | -22 | + | 4.35 | GGTGGCACCTGCCTTG
 |  | Rab3gap2 | -171 | -155 | + | 9.16 | CGAGTCACGTGTCCGA
 |  | Rragc | -130 | -114 | - | 6.32 | CCGGGCACGTGATAGT
 |  | Serac1 | 0 | 16 | + | 10.57 | GGGGTCACGTGCTCAC
 |  | Slc12a6 | -80 | -64 | + | 5.06 | GAGGTCACGTAACGGC
 |  | Slc24a6 | -227 | -211 | + | 7.17 | TAACCCACGTGCTTTC
 |  | Slc36a1 | -46 | -30 | + | 5.05 | AGCGGCACGTGACCTG
 |  | Slc36a1 | -18 | -2 | + | 4.71 | AGCATCACGTGACAGG
 |  | Snx8 | -151 | -135 | + | 4.56 | GCGGCCACGTGGTTGG
 |  | Snx8 | -5 | 11 | + | 9.85 | GAAGTCACGTGGGCGA
 |  | Ssfa2 | -15 | 1 | + | 8.12 | GGGTTCACGTGAAGCG
 |  | Tbccd1 | 21 | 37 | + | 7.73 | [NAME]
 |  | Wdr81 | -29 | -13 | + | 8.48 | AGAGACACGTGCGGTT
 |  | Wipi1 | -29 | -13 | - | 8.41 | ACCACCACGTGGCCTG
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
13 | V$USF_Q6 | USF | 10.1608946904 | 0.633333341777 | - 233 : 28 | 2.08514108765e-15
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 0610031J06Rik | 10 | 20 | - | 8.15 | GTCATGTGAC
 |  | 2700049A03Rik | -179 | -169 | - | 7.43 | AACACGTGGG
 |  | 2700049A03Rik | -122 | -112 | + | 6.46 | ACCACGTGGG
 |  | 6230409E13Rik | -24 | -14 | + | 8.11 | ATCACGTGGC
 |  | Ralgapa2 | -107 | -97 | - | 6.19 | CACCCGTGGG
 |  | Ankrd12 | -179 | -169 | + | 6.86 | CCCACGCGGC
 |  | Ankrd12 | -20 | -10 | + | 9.52 | GTCACGTGTC
 |  | Ankrd12 | -3 | 7 | + | 7.6 | GTCACGTGCT
 |  | Armcx1 | -30 | -20 | + | 7.44 | CTCACGTGAG
 |  | [NAME] | -143 | -133 | + | 6.46 | [NAME]
 |  | [NAME] | 3 | 13 | - | 6.36 | CGCCCGTGAC
 |  | Atp6ap2 | -216 | -206 | - | 6.76 | ATCTCGTGAC
 |  | Atp6v0b | -34 | -24 | + | 8.79 | GTCACGTGGG
 |  | Atp6v1h | -86 | -76 | + | 7.2 | GTCACGTGCG
 |  | Atp6v1h | -72 | -62 | + | 7.6 | CTCACGTGCC
 |  | Atp6v1h | 28 | 38 | - | 7.03 | CTCCCGTGGC
 |  | BC031353 | -16 | -6 | + | 8.43 | GACACGTGAC
 |  | Calr | -223 | -213 | + | 9.52 | [NAME]
 |  | Clcn3 | -192 | -182 | - | 6.91 | GCGACGTGAG
 |  | Cth | -151 | -141 | + | 7.54 | CCCACGTGGG
 |  | Ctsa | -26 | -16 | + | 7.1 | CTCACGGGGG
 |  | Ctsd | -36 | -26 | + | 8.28 | CCCACGTGAC
 |  | D6Wsu116e | -166 | -156 | + | 8.28 | [NAME]
 |  | D6Wsu116e | -23 | -13 | + | 8.28 | [NAME]
 |  | D6Wsu116e | -7 | 3 | + | 7.6 | ATCACGTGAC
 |  | Ddit3 | -199 | -189 | - | 8.11 | GCCGCGTGAC
 |  | Dirc2 | -223 | -213 | - | 6.52 | GGCACGTGAT
 |  | Dnajb11 | -18 | -8 | - | 6.18 | GCCGCGTGTG
 |  | Dock11 | -229 | -219 | - | 6.87 | CCCGCGTGAC
 |  | Dpp7 | -233 | -223 | + | 6.32 | GACACTTGGG
 |  | Dpp7 | -48 | -38 | + | 6.76 | ATCACGTGAT
 |  | Dpp7 | -17 | -7 | - | 8.15 | GTCATGTGAC
 |  | Dpp7 | -4 | 6 | + | 6.23 | ATCACATGAC
 |  | E430025E21Rik | -76 | -66 | + | 6.73 | ATCACTTGGC
 |  | E430025E21Rik | -19 | -9 | + | 9.52 | [NAME]
 |  | Fnip1 | -170 | -160 | - | 8.34 | GCCCCGTGAG
 |  | Fnip1 | -158 | -148 | - | 8.11 | GCCGCGTGAC
 |  | Fnip1 | -147 | -137 | - | 7.84 | GACCCGTGAG
 |  | Fnip1 | -77 | -67 | + | 8.28 | GCCACGTGAT
 |  | Fnip1 | -15 | -5 | - | 6.51 | GCGCCGTGGC
 |  | Gadd45a | -140 | -130 | - | 7.43 | GTCCCGTGGG
 |  | Gba | -45 | -35 | + | 7.6 | ATCACGTGAC
 |  | Gba | -25 | -15 | - | 7.3 | ATCATGTGAC
 |  | Gga2 | -64 | -54 | - | 6.42 | ACCTCGTGAG
 |  | Gga2 | 21 | 31 | + | 8.44 | GTCACGTGCC
 |  | [NAME] | -18 | -8 | + | 7.2 | ACCACGTGAC
 |  | Hyou1 | -135 | -125 | - | 6.4 | [NAME]
 |  | Hyou1 | 1 | 11 | - | 6.36 | GTCTCGTGGG
 |  | [NAME] | -83 | -73 | - | 6.18 | GCCGCGTGTG
 |  | [NAME] | -24 | -14 | + | 9.12 | GCCACGTGAC
 |  | Lmbr1l | -16 | -6 | + | 7.81 | GTCACTGGGC
 |  | Lpar4 | -195 | -185 | - | 7.74 | GTCAAGTGGC
 |  | Mfsd1 | -88 | -78 | - | 8.34 | ACCACGTGAG
 |  | Mfsd1 | -72 | -62 | + | 6.36 | TTCACGTGAG
 |  | Mfsd1 | -38 | -28 | - | 7.6 | GTCACGTGAA
 |  | Mfsd1 | -28 | -18 | + | 6.75 | CACACGTGAT
 |  | Pgm2l1 | -136 | -126 | - | 6.6 | CTCCCGTGAG
 |  | Rab3gap2 | -168 | -158 | + | 9.52 | GTCACGTGTC
 |  | Rragc | -127 | -117 | - | 6.52 | GGCACGTGAT
 |  | Serac1 | 3 | 13 | + | 7.6 | GTCACGTGCT
 |  | Slc24a6 | -224 | -214 | + | 6.36 | CCCACGTGCT
 |  | Slc36a1 | -43 | -33 | - | 8.44 | GGCACGTGAC
 |  | Slc36a1 | -15 | -5 | + | 7.6 | ATCACGTGAC
 |  | Smyd3 | -39 | -29 | + | 6.46 | CTCACAGGAC
 |  | Snx8 | -148 | -138 | + | 8.78 | GCCACGTGGT
 |  | Snx8 | -2 | 8 | + | 8.79 | GTCACGTGGG
 |  | Snx8 | 16 | 26 | + | 7.3 | CTCACATGAC
 |  | Stxbp5 | -42 | -32 | + | 6.6 | CTCACGGGAG
 |  | Tbccd1 | 24 | 34 | + | 7.59 | CACACGTGAC
 |  | Wdr81 | -209 | -199 | - | 6.9 | GTCCAGTGGC
 |  | Wdr81 | 4 | 14 | + | 6.23 | ATCACATGAC
 |  | Wipi1 | -26 | -16 | + | 7.7 | ACCACGTGGC
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
14 | V$NFY_Q6 | NF-Y | 11.9351525509 | 0.472727279771 | -152:-22 | 1.10080024066e-13
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | Armcx1 | -48 | -37 | - | 6.3 | CTCACTGGTGA
 |  | Manf | -120 | -109 | + | 8.64 | CAGCCAATGAG
 |  | Manf | -67 | -56 | + | 8.77 | GGACCAATGAG
 |  | Manf | -25 | -14 | + | 6.8 | ACACCAATGGG
 |  | Atp6ap2 | -60 | -49 | - | 8.68 | GCGATTGGCTG
 |  | BC031353 | -117 | -106 | + | 6.09 | TCCCCAATCTC
 |  | Calr | -148 | -137 | - | 8.32 | CTCATTGGCCC
 |  | Clcn3 | -88 | -77 | + | 7.2 | CGACCAATAGG
 |  | Creg1 | -54 | -43 | - | 8.75 | CTGATTGGCTT
 |  | Creld2 | -142 | -131 | - | 7.8 | CTCATTGGTGG
 |  | Cth | -83 | -72 | + | 7.8 | CGACCAATAAG
 |  | Cth | -47 | -36 | - | 9.04 | ATGATTGGTTG
 |  | Ddit3 | -113 | -102 | - | 5.74 | CTGAGTGGCGG
 |  | Dnajb11 | -118 | -107 | - | 7.44 | CCCATTGGCCG
 |  | Dnajb11 | -82 | -71 | - | 8.75 | CTGATTGGCTT
 |  | Dnajb11 | -39 | -28 | - | 9.15 | CTGATTGGCTG
 |  | Dtna | -69 | -58 | - | 8.62 | GCCATTGGTGA
 |  | Eif2ak3 | -143 | -132 | - | 8.04 | CTCATTGGCCG
 |  | Eif2ak3 | -23 | -12 | + | 9.13 | CAACCAATCGC
 |  | Fnip1 | -136 | -125 | + | 8.17 | CAGCCAATGGC
 |  | Fnip1 | -55 | -44 | + | 8.68 | CAGCCAATCGC
 |  | [NAME] | -58 | -47 | - | 6.74 | TTCATTGGCTG
 |  | [NAME] | -26 | -15 | - | 5.53 | TCCATTGGCCG
 |  | Gadd45a | -39 | -28 | + | 5.87 | AACCCAATGGC
 |  | Herpud1 | -64 | -53 | - | 6.93 | CTGATTGGGCC
 |  | Herpud1 | -30 | -19 | + | 6.14 | CAGCCAATGGA
 |  | Hyou1 | -22 | -11 | + | 8.17 | GGACCAATGGG
 |  | [NAME] | -143 | -132 | + | 9.09 | TAACCAATAGG
 |  | [NAME] | -90 | -79 | + | 9.04 | CAACCAATCAT
 |  | [NAME] | -51 | -40 | + | 10.44 | TAGCCAATCAG
 |  | Lmbr1l | -65 | -54 | + | 5.9 | GAACCAGTAAG
 |  | Lpar4 | -109 | -98 | - | 7.84 | GCGATTGGTGG
 |  | Lpar4 | -35 | -24 | + | 6.12 | TATCCAATGAA
 |  | Esyt1 | -144 | -133 | + | 7.06 | GGTCCAATCAC
 |  | Nans | -29 | -18 | - | 8.55 | CCGATTGGCTG
 |  | Pdia4 | -97 | -86 | - | 8.44 | GTGATTGGTGG
 |  | Pdia4 | -78 | -67 | + | 9.15 | CAGCCAATCAG
 |  | Pdia6 | -57 | -46 | + | 6.19 | AGACCAATGAA
 |  | Pfkp | -37 | -26 | - | 7.04 | CCCATTGGCGC
 |  | Rragc | -78 | -67 | + | 7.4 | CAGCCAATAAT
 |  | Rragc | -49 | -38 | + | 6.32 | GGCCCAATCGG
 |  | Sdf2l1 | -29 | -18 | - | 7.99 | ACGATTGGCTG
 |  | Slc25a27 | -74 | -63 | + | 9.15 | CAGCCAATCAG
 |  | Ssfa2 | -47 | -36 | + | 6.84 | GAGCCACTCGC
 |  | Syvn1 | -151 | -140 | + | 5.43 | GGGCCACTCTG
 |  | Syvn1 | -126 | -115 | + | 7.61 | CAACCACTCAC
 |  | Syvn1 | -72 | -61 | - | 8.77 | CTCATTGGTCC
 |  | Syvn1 | -47 | -36 | + | 9 | CAACCAATCGG
 |  | Tbccd1 | -58 | -47 | + | 7.84 | CCACCAATCGC
 |  | Tbccd1 | -29 | -18 | + | 6.27 | CGACCAATTGC
 |  | Tet1 | -52 | -41 | + | 8.91 | GGACCAATGAC
 |  | Zfp691 | -152 | -141 | + | 6.85 | AAACCAATGTT
 |  | Zfp691 | -98 | -87 | + | 6.74 | TAGCCAATAGA
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
15 | V$CAAT_01 | CCAAT box | 10.751155233 | 0.480000012748 | -92:-25 | 1.49515410308e-11
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | Manf | -69 | -57 | + | 6.41 | GTGGACCAATGA
 |  | Atp6ap2 | -59 | -47 | - | 9.22 | CGATTGGCTGAG
 |  | Calr | -33 | -21 | + | 7.02 | CTAAACCAGTCA
 |  | Clcn3 | -90 | -78 | + | 6.86 | TCCGACCAATAG
 |  | Clcn3 | -45 | -33 | - | 5.88 | TGCTTGGACGGT
 |  | Creg1 | -53 | -41 | - | 7.5 | TGATTGGCTTTC
 |  | Creld2 | -83 | -71 | + | 7.52 | TCCGGCCAATAG
 |  | Cth | -85 | -73 | + | 6.22 | GCCGACCAATAA
 |  | Cth | -46 | -34 | - | 9.25 | TGATTGGTTGCG
 |  | Ctsd | -25 | -13 | + | 7.02 | [NAME]
 |  | Dnajb11 | -81 | -69 | - | 7.79 | TGATTGGCTTCC
 |  | Dnajb11 | -38 | -26 | - | 9.91 | TGATTGGCTGCG
 |  | E430025E21Rik | -25 | -13 | - | 5.94 | CCCTTGGTCACG
 |  | Eif2ak3 | -87 | -75 | - | 5.72 | TGATTGGTAGGT
 |  | Eif2ak3 | -25 | -13 | + | 8.45 | CGCAACCAATCG
 |  | Fnip1 | -57 | -45 | + | 7.8 | GCCAGCCAATCG
 |  | [NAME] | -57 | -45 | - | 9.51 | TCATTGGCTGCT
 |  | [NAME] | -25 | -13 | - | 8.32 | CCATTGGCCGCG
 |  | Gadd45a | -36 | -24 | - | 6.36 | CCAATGGCCTGA
 |  | Herpud1 | -32 | -20 | + | 8.8 | CTCAGCCAATGG
 |  | [NAME] | -92 | -80 | + | 9.36 | CTCAACCAATCA
 |  | [NAME] | -53 | -41 | + | 10.63 | ACTAGCCAATCA
 |  | Lpar4 | -37 | -25 | + | 8.48 | CTTATCCAATGA
 |  | Nans | -28 | -16 | - | 7.32 | CGATTGGCTGTC
 |  | Nbas | -68 | -56 | + | 6.28 | CTCTGCCAATCA
 |  | Pdia4 | -80 | -68 | + | 9.62 | CACAGCCAATCA
 |  | Pdia6 | -89 | -77 | - | 5.98 | CAATTGGCCACG
 |  | Pdia6 | -59 | -47 | + | 7.85 | AGAGACCAATGA
 |  | Rragc | -80 | -68 | + | 8.75 | CCCAGCCAATAA
 |  | Sdf2l1 | -28 | -16 | - | 7.62 | CGATTGGCTGCC
 |  | Slc25a27 | -76 | -64 | + | 10.12 | ACCAGCCAATCA
 |  | Ssfa2 | -49 | -37 | + | 5.8 | CGGAGCCACTCG
 |  | Syvn1 | -71 | -59 | - | 6.49 | TCATTGGTCCGC
 |  | Syvn1 | -49 | -37 | + | 8.45 | CGCAACCAATCG
 |  | Tet1 | -54 | -42 | + | 7.52 | AAGGACCAATGA
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
16 | V$AP4_Q6 | AP-4 | 12.3703864679 | 0.640000003576 | - 7 : 54 | 2.61129326934e-11
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 6230409E13Rik | -7 | 3 | - | 6.66 | ACGCGCTGAC
 |  | 6230409E13Rik | 47 | 57 | - | 5.57 | CGCCGCTGCC
 |  | [NAME] | 21 | 31 | + | 7.75 | CGCAGCGGGG
 |  | Atp6v0b | 3 | 13 | - | 5.28 | TGGCGCTGCG
 |  | Calr | -3 | 7 | + | 8.03 | CTCAGCGGCT
 |  | Clcn3 | -7 | 3 | - | 6.66 | ACGCGCTGAC
 |  | Cpeb2 | 42 | 52 | + | 6.66 | CGCAGCGGCA
 |  | Ctsa | 41 | 51 | - | 6.26 | TAGAGCTGAT
 |  | Dirc2 | 15 | 25 | + | 5.57 | AGCAGCTCCG
 |  | Dirc2 | 51 | 61 | + | 6.26 | GTCAGCTCCC
 |  | Dnajb11 | 54 | 64 | - | 8.72 | GGCAGCTGAG
 |  | Dock11 | 35 | 45 | + | 5.57 | AGCAGCGGCC
 |  | E430025E21Rik | 25 | 35 | - | 7.63 | GGCAGCTGAC
 |  | Eml5 | 1 | 11 | + | 9.81 | CTCAGCTGGG
 |  | Erbb2 | 37 | 47 | - | 7.35 | TGGAGCTGAG
 |  | Gga2 | 50 | 60 | + | 8.04 | GGCAGCTGGA
 |  | [NAME] | 16 | 26 | + | 7.63 | GGCAGCTGCT
 |  | Esyt1 | 10 | 20 | - | 6.95 | TGCAGCTGCT
 |  | Mfsd1 | -7 | 3 | - | 5.57 | TGCCGCTGCC
 |  | Mospd1 | 47 | 57 | + | 8.72 | CGCAGCTGCT
 |  | Ppp1r15a | -3 | 7 | + | 5.97 | CACAGCGCCG
 |  | Ppp1r15a | 51 | 61 | + | 6.26 | GTCAGCTCTG
 |  | Pdia4 | 5 | 15 | + | 6.66 | GGCAGCGGGG
 |  | Pdia6 | 52 | 62 | + | 5.57 | GGCAGCGGCG
 |  | Pfkp | 12 | 22 | + | 6.26 | GGCAGCGGTT
 |  | Pgap1 | 4 | 14 | - | 5.28 | GCGCGCTGCT
 |  | Pgm2l1 | 45 | 55 | - | 8.72 | GACAGCTGAG
 |  | Ppp2r5b | 41 | 51 | + | 8.04 | AGCAGCTGGG
 |  | Rragc | 12 | 22 | + | 6.26 | AACAGCGGCG
 |  | Samd8 | 37 | 47 | - | 5.57 | GGCCGCTGCT
 |  | Sdf2l1 | 11 | 21 | - | 6.26 | [NAME]
 |  | Sdf2l1 | 45 | 55 | + | 8.04 | AGCAGCTGGA
 |  | Sfmbt2 | 13 | 23 | + | 7.63 | ATCAGCTGCG
 |  | Slc12a6 | 4 | 14 | + | 7.63 | AACAGCTGCG
 |  | Slc12a6 | 25 | 35 | + | 8.72 | ATCAGCTGGC
 |  | Slc36a1 | 44 | 54 | - | 5.97 | CGGCGCTGAG
 |  | Snx8 | 40 | 50 | - | 7.35 | ACCCGCTGCC
 |  | Txndc16 | 29 | 39 | - | 8.03 | AGCCGCTGAG
 |  | Wdr7 | 33 | 43 | + | 5.57 | AGCAGCGGCG
 |  | Wdr81 | 42 | 52 | + | 5.97 | CTCAGCGCTG
 |  | Wipi1 | 52 | 62 | + | 7.63 | AACAGCTGTC
 |  | Zfp691 | 4 | 14 | - | 6.26 | CGCCGCTGTC
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
17 | V$EGR3_01 | Egr-3 | 17.8865145874 | 0.716911929349 | - 187 : 35 | 4.7827866382e-11
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | Fam189b | -11 | 1 | - | 3.79 | CCTCCTCCGCAC
 |  | 6230409E13Rik | -177 | -165 | - | 2.66 | CCTCCCGCGCCG
 |  | Ralgapa2 | -142 | -130 | + | 1.88 | GTGCGCGTGCGT
 |  | Acp6 | -176 | -164 | + | 5.37 | GAACGTGGGAGG
 |  | Acp6 | 17 | 29 | + | 4.56 | GTCCGTGGGAGG
 |  | Ak4 | -92 | -80 | - | 4.52 | TCGCCCCCGCAG
 |  | Ankrd12 | -182 | -170 | - | 8.99 | ACTCCCACGCGG
 |  | Manf | -170 | -158 | - | 5.91 | CCGCCCAGGCTC
 |  | Manf | -46 | -34 | + | 2.43 | ATGGGTGGGCGC
 |  | [NAME] | -181 | -169 | + | 2.66 | GGGCGGGGGTGG
 |  | [NAME] | -140 | -128 | + | 2.45 | ACGCGGGGGCGA
 |  | Atp6ap2 | -123 | -111 | - | 1.89 | TCGCCTCCGCCC
 |  | Atp6ap2 | -71 | -59 | + | 1.91 | CGGCGTAGTTGG
 |  | Atp6v0b | -158 | -146 | + | 2.46 | CAGCGCAGGTGG
 |  | Atp6v0b | -44 | -32 | + | 2 | GTGCGCGGGGGT
 |  | Calr | -162 | -150 | + | 2.45 | ACGCGTGGTCGA
 |  | Clcn3 | -123 | -111 | - | 5.36 | CCGGCCACGCCC
 |  | Creld2 | -57 | -45 | + | 2.19 | AAAGGTGGGCGG
 |  | Ctsa | -7 | 5 | - | 3 | ACACCCAAGCGG
 |  | Ctsd | 1 | 13 | + | 2.08 | GAAAGTGGGCGG
 |  | Ctsd | 30 | 42 | + | 7.13 | GTGCGTAGGCCT
 |  | Dnajb11 | 9 | 21 | - | 2.74 | TGGCCCACGCCT
 |  | Dock11 | -57 | -45 | + | 2.37 | GCGCGCGGGAGG
 |  | Eml5 | -164 | -152 | + | 7.36 | CTGCGTGGGGGG
 |  | Eno2 | -164 | -152 | + | 1.88 | GTGGGTGGGCTT
 |  | Eno2 | 11 | 23 | - | 3.2 | CCACCCGCGCTC
 |  | Fnip1 | -187 | -175 | - | 2.32 | [NAME]
 |  | [NAME] | -73 | -61 | - | 5.36 | CCGCCCAGGCCC
 |  | Gga2 | -34 | -22 | + | 2.44 | GTGCGTGGGGGC
 |  | Hyou1 | 2 | 14 | + | 4.51 | TCTCGTGGGCGG
 |  | [NAME] | -99 | -87 | + | 8.63 | GGGCGTGGGCGA
 |  | Lmbr1l | -34 | -22 | - | 5.46 | CCGCCCAGGCCT
 |  | Lmbr1l | 10 | 22 | + | 4.33 | CCGCGTAGCCGG
 |  | Map3k1 | -173 | -161 | - | 1.91 | CCACCTGCGCCG
 |  | Map3k1 | -69 | -57 | - | 5.07 | CCGCCCACCCGC
 |  | Map3k1 | -17 | -5 | - | 4.54 | CCTCCCCCGCAG
 |  | Mfsd1 | -153 | -141 | - | 3.28 | ACTCCCACTCCC
 |  | Mfsd11 | -129 | -117 | + | 2.27 | CTGCGCCGGCGT
 |  | Mink1 | -86 | -74 | + | 2.25 | GCGCGCAGGTGT
 |  | Mpp5 | -160 | -148 | + | 5.38 | GGCCGTGGGCGG
 |  | Mpp5 | -94 | -82 | + | 5.07 | GCGCGTGCGCGG
 |  | Ppp1r15a | 23 | 35 | + | 2.35 | CCGCGTGGACGA
 |  | Nans | -93 | -81 | + | 4.72 | AGGCGTAGGCAG
 |  | Pdia4 | -152 | -140 | - | 1.82 | [NAME]
 |  | Pdia4 | 20 | 32 | + | 4.61 | CGGTGTAGGCGG
 |  | Pdia6 | -15 | -3 | - | 4.33 | CCGCCTCCGCGC
 |  | Pdia6 | 29 | 41 | + | 2.61 | GGACGTGGGCGC
 |  | Pfkp | -19 | -7 | + | 11.35 | GGGCGTGGGCGG
 |  | Pfkp | 33 | 45 | + | 2.35 | GCGCGTGGGCCA
 |  | Pgap1 | -124 | -112 | - | 3.18 | TCGCTCACGCTG
 |  | Pgap1 | -92 | -80 | + | 7.26 | CTCCGTGGGCGG
 |  | Pi4k2b | -88 | -76 | - | 3.3 | CCACCCTCGCTT
 |  | Pi4k2b | -58 | -46 | + | 7.13 | CTGCGCAGGCGT
 |  | Pi4k2b | -17 | -5 | + | 5.36 | GGGCGTGGCCGG
 |  | Pi4k2b | 0 | 12 | + | 5.36 | GGGCGTGGCCGG
 |  | Pi4k2b | 35 | 47 | + | 2.46 | TGGCGTCGGTGG
 |  | Rab3gap2 | -125 | -113 | - | 5.07 | CCGCGCACGCGC
 |  | Samd8 | -81 | -69 | + | 1.98 | ATGCTTGGGCAT
 |  | Sdf2l1 | -20 | -8 | + | 2.09 | TGCCGTGGGAGG
 |  | Smyd3 | -52 | -40 | - | 3.9 | CCTCCTGCGCAT
 |  | Snx30 | -16 | -4 | + | 5.07 | CCGCGGGGGCGG
 |  | Snx30 | 3 | 15 | + | 5.48 | AGCCGTGGGCGG
 |  | Snx8 | -71 | -59 | + | 5.4 | TGGCATGGGCGT
 |  | Snx8 | -40 | -28 | + | 10.77 | TGGCGTGGGCGG
 |  | Snx8 | -16 | -4 | + | 2.66 | GGGCGCGGGAGG
 |  | Snx8 | -1 | 11 | + | 3.94 | TCACGTGGGCGA
 |  | Sord | -187 | -175 | - | 3.83 | ACACCCGCGCTC
 |  | Ssfa2 | -183 | -171 | + | 6.01 | CGTCGTGGGCGT
 |  | Ssfa2 | -139 | -127 | + | 5.95 | TAGCGGGGGCGT
 |  | Ssfa2 | -100 | -88 | + | 4.58 | TAGAGTAGGCGG
 |  | Stxbp5 | -176 | -164 | + | 5.36 | GGGCGGGGGCGG
 |  | Syvn1 | -14 | -2 | - | 3.84 | ACTCCTACACAA
 |  | Tbc1d8b | -20 | -8 | + | 4.56 | CTCCGTGGGAGG
 |  | Tbc1d8b | 11 | 23 | + | 3.99 | CTACGTGGGAGA
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
18 | V$XBP1_01 | [NAME] | 13.6382649355 | 0.459893056575 | -270:-5 | 7.60186029125e-11
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 2700049A03Rik | -125 | -108 | + | 5.69 | GTTACCACGTGGGAAAA
 |  | 6230409E13Rik | -27 | -10 | + | 8.4 | GACATCACGTGGCCCTT
 |  | Ankrd12 | -7 | 10 | - | 4.92 | CCGGGTCACGTGCTCGC
 |  | Armcx1 | -44 | -27 | + | 6.37 | CTGGTGACGTGCCCCTC
 |  | Armcx1 | -17 | 0 | + | 4.95 | AAGCCTACGTGTGCAGA
 |  | Manf | -77 | -60 | + | 4.44 | CTGGGCACGTGGACCAA
 |  | Atp6ap2 | -134 | -117 | - | 4.85 | ATTCATCACGTTCGCCT
 |  | Atp6ap2 | -109 | -92 | - | 5.24 | ATTGCTGACGTCGACCA
 |  | Atp6v0b | -87 | -70 | + | 7.52 | GGCATGACGTCTACCAG
 |  | Atp6v1h | -89 | -72 | + | 4.98 | GCGGTCACGTGCGGCTG
 |  | BC031353 | -20 | -3 | - | 8.1 | TTGGGACACGTGACCAG
 |  | Calr | -227 | -210 | - | 6.05 | TTCAGTCACGTGACCGT
 |  | Clcn3 | -20 | -3 | - | 4.91 | GCCGTTCACGTCAACGC
 |  | Cpox | -113 | -96 | - | 4.71 | AAGGTGTACGTGACTAA
 |  | Cth | -163 | -146 | + | 5.46 | [NAME]
 |  | D6Wsu116e | -27 | -10 | - | 5.68 | CCAGGTCACGTGAGGAC
 |  | D6Wsu116e | -10 | 7 | + | 4.45 | ACCATCACGTGACGTGA
 |  | Dirc2 | -227 | -210 | - | 5.65 | ATTAGGCACGTGATGTA
 |  | Dpp7 | -52 | -35 | - | 4.45 | GACTATCACGTGATGCT
 |  | Eif2ak3 | -61 | -44 | - | 4.87 | AAGGAACGCGTCTGCCT
 |  | Grn | -119 | -102 | + | 4.54 | GGCATGAGGTGTCTCAT
 |  | Herpud1 | -60 | -43 | - | 4.6 | TTGGGCCACGTTGGACA
 |  | Hyou1 | -133 | -116 | + | 8.38 | ACCGTGACGTGGCCCAA
 |  | Hyou1 | -32 | -15 | + | 5.06 | TCTTCTACGTGGACCAA
 |  | [NAME] | -229 | -212 | - | 5.52 | ATATATGACGTGATTGA
 |  | Mfsd1 | -76 | -59 | - | 6.61 | ACCGTTCACGTGAGCAC
 |  | Mfsd1 | -42 | -25 | - | 5.47 | GCAAGTCACGTGAACAC
 |  | Mfsd11 | -103 | -86 | + | 4.51 | AGTGGGACGTGAACGAA
 |  | Ppp1r15a | -17 | 0 | - | 5.31 | TCCGGTGACGTCAGCAC
 |  | Pdia4 | -266 | -249 | - | 6.75 | TTCTTACACGTGTTCTT
 |  | Pgap1 | -270 | -253 | + | 5.11 | TGATTAACGTGTGCGAA
 |  | Rab3gap2 | -171 | -154 | + | 5.27 | CGAGTCACGTGTCCGAA
 |  | Rnf185 | -202 | -185 | - | 9.06 | TATTCCCACGTCTTCAC
 |  | Slc24a6 | -228 | -211 | - | 5.32 | ATAACCCACGTGCTTTC
 |  | Slc36a1 | -262 | -245 | - | 4.86 | TAAATGCACGTTAATAT
 |  | Slc36a1 | -18 | -1 | + | 4.45 | AGCATCACGTGACAGGG
 |  | Snx30 | -242 | -225 | - | 9.45 | CTGAGCCACGTAACCCT
 |  | Snx8 | -5 | 12 | + | 5.22 | GAAGTCACGTGGGCGAG
 |  | Wdr81 | -159 | -142 | - | 6.44 | TTTGCCCACGTAGCCCC
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
19 | V$MYCMAX_01 | c-Myc/Max | 15.6634559302 | 0.585714288013 | - 315 : 22 | 2.1517941179e-10
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 2700049A03Rik | -181 | -167 | + | 6.95 | AGAACACGTGGGGG
 |  | 2700049A03Rik | -124 | -110 | + | 9.04 | TTACCACGTGGGAA
 |  | 2700049A03Rik | -98 | -84 | + | 3.54 | AAAGCAAGTGCCCA
 |  | 6230409E13Rik | -26 | -12 | + | 6.45 | ACATCACGTGGCCC
 |  | Ankrd12 | -22 | -8 | + | 4.92 | GAGTCACGTGTCCG
 |  | Ankrd12 | -5 | 9 | + | 7.26 | GGGTCACGTGCTCG
 |  | Manf | -76 | -62 | + | 8.26 | [NAME]
 |  | Atp6ap2 | -250 | -236 | + | 4.48 | GGGCCACCTGCTCT
 |  | Atp6v0b | -36 | -22 | + | 3.38 | GGGTCACGTGGGGT
 |  | Atp6v1h | -74 | -60 | + | 4.09 | TGCTCACGTGCCAG
 |  | BC031353 | -18 | -4 | + | 5.43 | GGGACACGTGACCA
 |  | Calr | -315 | -301 | + | 3.35 | TTAACACCTGGTAC
 |  | Calr | -225 | -211 | + | 4.26 | CAGTCACGTGACCG
 |  | Calr | -165 | -151 | + | 4.02 | ACAACGCGTGGTCG
 |  | Clcn3 | -184 | -170 | + | 3.52 | AGAGCAGGTGGCAC
 |  | Cth | -153 | -139 | + | 6.06 | GTCCCACGTGGGCA
 |  | Ctsd | -38 | -24 | + | 4.23 | CCCCCACGTGACCT
 |  | Dirc2 | -225 | -211 | + | 5.51 | TAGGCACGTGATGT
 |  | Dnajb11 | -311 | -297 | + | 3.68 | AAGTCACGTGTGCA
 |  | Dpp7 | -50 | -36 | + | 3.48 | CTATCACGTGATGC
 |  | Fnip1 | -79 | -65 | + | 6.63 | CTGCCACGTGATAC
 |  | Fzd3 | -29 | -15 | + | 4.45 | GCGGCACGTGCGCG
 |  | Gga2 | 19 | 33 | + | 3.67 | CCGTCACGTGCCTC
 |  | Grn | -165 | -151 | + | 3.42 | TGAACGCGTGCCCT
 |  | [NAME] | -20 | -6 | + | 6.66 | CCACCACGTGACCC
 |  | Hyou1 | -231 | -217 | + | 4.39 | AGAGCACCTGCTCC
 |  | [NAME] | -26 | -12 | + | 6.3 | CTGCCACGTGACAG
 |  | Lmbr1l | -291 | -277 | + | 5.08 | AGACCCCGTGGTGC
 |  | Esyt1 | -283 | -269 | + | 5.75 | ATCCCACGTGGGAG
 |  | Mfsd1 | -90 | -76 | + | 5.64 | CCACCACGTGAGCA
 |  | Mfsd1 | -30 | -16 | + | 4.88 | AACACACGTGATCA
 |  | Mospd1 | -141 | -127 | + | 3.95 | AAGCCAGGTGGCAA
 |  | Ppp1r15a | 20 | 34 | + | 3.68 | AAGCCGCGTGGACG
 |  | Pdia4 | -264 | -250 | + | 6.61 | CTTACACGTGTTCT
 |  | Pfkp | -315 | -301 | + | 9.07 | CGCCCACGTGGTGG
 |  | Pgm2l1 | 8 | 22 | + | 3.5 | GGCGCACGTGCGAG
 |  | Rab3gap2 | -170 | -156 | + | 4.92 | GAGTCACGTGTCCG
 |  | Rragc | -129 | -115 | + | 7.16 | CGGGCACGTGATAG
 |  | Serac1 | 1 | 15 | + | 7.26 | GGGTCACGTGCTCA
 |  | Slc24a6 | -226 | -212 | + | 8.21 | AACCCACGTGCTTT
 |  | Slc36a1 | -45 | -31 | + | 3.97 | GCGGCACGTGACCT
 |  | Snx8 | -150 | -136 | + | 12.31 | CGGCCACGTGGTTG
 |  | Snx8 | -4 | 10 | + | 5.59 | AAGTCACGTGGGCG
 |  | Tbccd1 | 22 | 36 | + | 3.68 | TGCACACGTGACTT
 |  | Wipi1 | -28 | -14 | + | 10.73 | CCACCACGTGGCCT
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
20 | V$AP4_Q5 | AP-4 | 11.1899891273 | 0.614285723865 | - 7 : 78 | 2.23468104361e-09
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 0610031J06Rik | -5 | 5 | + | 6.66 | ATCAGCAGGA
 |  | 6230409E13Rik | -7 | 3 | - | 6.83 | ACGCGCTGAC
 |  | Armcx1 | 62 | 72 | - | 6.66 | GCCTGCTGCG
 |  | [NAME] | 21 | 31 | + | 7.34 | CGCAGCGGGG
 |  | BC031353 | 60 | 70 | + | 6.94 | GGCAGCGGGG
 |  | Calr | -3 | 7 | + | 7.06 | CTCAGCGGCT
 |  | Calr | 78 | 88 | - | 6.25 | AGCCGCTGCC
 |  | Clcn3 | -7 | 3 | - | 6.83 | ACGCGCTGAC
 |  | Cpeb2 | 34 | 44 | - | 7.34 | CCCTGCTGCG
 |  | Creld2 | 70 | 80 | - | 7.34 | ACCTGCTGCT
 |  | Ctsa | 23 | 33 | + | 6.43 | GGCAGCACGT
 |  | Ctsa | 41 | 51 | - | 6.94 | TAGAGCTGAT
 |  | Dirc2 | 15 | 25 | + | 6.54 | AGCAGCTCCG
 |  | Dirc2 | 51 | 61 | + | 6.25 | GTCAGCTCCC
 |  | Dnajb11 | 54 | 64 | + | 7.45 | GGCAGCTGAG
 |  | E430025E21Rik | 25 | 35 | + | 6.76 | GGCAGCTGAC
 |  | Eif2ak3 | 71 | 81 | + | 7.22 | GGCAGCTCTG
 |  | Eml5 | 1 | 11 | + | 9.34 | CTCAGCTGGG
 |  | Erbb2 | 37 | 47 | - | 6.66 | TGGAGCTGAG
 |  | Gadd45a | 62 | 72 | + | 6.54 | GGCAGCAGTG
 |  | Gga2 | 50 | 60 | + | 7.85 | GGCAGCTGGA
 |  | [NAME] | 16 | 26 | + | 7.85 | GGCAGCTGCT
 |  | [NAME] | 73 | 83 | - | 8.03 | CCGAGCTGTG
 |  | Letmd1 | 77 | 87 | - | 7.34 | CCCTGCTGTG
 |  | Esyt1 | 0 | 10 | - | 6.54 | CTGAGCTGCC
 |  | Esyt1 | 10 | 20 | - | 6.76 | TGCAGCTGCT
 |  | Mfsd11 | 30 | 40 | - | 6.94 | CCCTGCTGCC
 |  | Mospd1 | 47 | 57 | + | 8.25 | CGCAGCTGCT
 |  | Ppp1r15a | 51 | 61 | + | 7.62 | GTCAGCTCTG
 |  | Pdia4 | 5 | 15 | + | 6.94 | GGCAGCGGGG
 |  | Pfkp | 12 | 22 | + | 6.94 | GGCAGCGGTT
 |  | Pgap1 | 12 | 22 | + | 9.34 | CTCAGCTGGG
 |  | Pgm2l1 | 45 | 55 | + | 7.45 | GACAGCTGAG
 |  | Pgm2l1 | 76 | 86 | - | 8.25 | GCCAGCTGTG
 |  | Ppp2r5b | 41 | 51 | + | 8.53 | AGCAGCTGGG
 |  | Sdf2l1 | 45 | 55 | + | 7.85 | AGCAGCTGGA
 |  | Sfmbt2 | 13 | 23 | + | 7.85 | ATCAGCTGCG
 |  | Slc12a6 | 4 | 14 | + | 7.45 | AACAGCTGCG
 |  | Slc12a6 | 25 | 35 | + | 8.25 | ATCAGCTGGC
 |  | Snx30 | 75 | 85 | - | 6.94 | CGGAGCTGTG
 |  | Snx8 | 40 | 50 | - | 7.34 | ACCCGCTGCC
 |  | Snx8 | 65 | 75 | - | 6.76 | TGCAGCTGCT
 |  | Txndc16 | 13 | 23 | + | 7.34 | CGCAGCAGGG
 |  | Txndc16 | 29 | 39 | - | 7.06 | AGCCGCTGAG
 |  | Wdr7 | 13 | 23 | + | 8.25 | GTCAGCTGAT
 |  | Wdr81 | 18 | 28 | + | 7.16 | ATCAGCTGAC
 |  | Wdr81 | 42 | 52 | + | 6.43 | CTCAGCGCTG
 |  | Wdr81 | 69 | 79 | - | 7.34 | CCCTGCTGCG
 |  | Wipi1 | 52 | 62 | + | 7.45 | AACAGCTGTC
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
21 | V$GATA1_01 | GATA-1 | 6.16102405104 | 0.538098700176 | - 141 : 21 | 1.05337684595e-07
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | Fam189b | -84 | -74 | - | 6.25 | CCCTATCTCC
 |  | Fam189b | 12 | 22 | - | 5.9 | CACCATCCCC
 |  | 6230409E13Rik | -102 | -92 | + | 5.62 | GGGGATGCGG
 |  | Ankrd12 | 16 | 26 | - | 5.62 | GCCAATCGCG
 |  | Atp6ap2 | -61 | -51 | + | 5.52 | GGCGATTGGC
 |  | Atp6v0b | -20 | -10 | - | 5.69 | GCGCATCACG
 |  | BC031353 | -115 | -105 | - | 5.76 | CCCAATCTCC
 |  | Bnip3l | -99 | -89 | - | 5.65 | CCCTATCCTG
 |  | Calr | -116 | -106 | - | 5.69 | AGCCATCTGG
 |  | Creld2 | -106 | -96 | - | 5.64 | CCACATCAGG
 |  | D6Wsu116e | -11 | -1 | - | 6.52 | CACCATCACG
 |  | Ddit3 | -140 | -130 | + | 6.65 | CGCGATGGGG
 |  | Dnajb11 | -40 | -30 | + | 5.49 | GCTGATTGGC
 |  | Dnajb11 | 3 | 13 | + | 5.52 | GGCGATTGGC
 |  | Dpp7 | -52 | -42 | - | 5.98 | GACTATCACG
 |  | Erbb2 | -28 | -18 | - | 6.19 | CCCAATCACC
 |  | Fnip1 | -73 | -63 | + | 6.24 | CGTGATACGG
 |  | Fnip1 | -53 | -43 | - | 5.52 | GCCAATCGCC
 |  | Fzd3 | -122 | -112 | - | 6.43 | CACTATCACC
 |  | Herpud1 | -65 | -55 | + | 6.03 | GCTGATTGGG
 |  | Herpud1 | -3 | 7 | - | 5.83 | CGCTATCTGC
 |  | Hyou1 | -121 | -111 | - | 5.5 | CCCAATCCGC
 |  | [NAME] | -107 | -97 | - | 5.61 | GCCTATCCCC
 |  | [NAME] | -49 | -39 | - | 5.58 | GCCAATCAGG
 |  | Letmd1 | -141 | -131 | + | 5.81 | CACGATAGCG
 |  | Lmbr1l | -106 | -96 | - | 5.53 | TCCTATCAGC
 |  | Lpar4 | -74 | -64 | + | 5.66 | GGGGATTGGG
 |  | Mfsd1 | -128 | -118 | - | 6.39 | CCCCATCGGC
 |  | Nbas | -64 | -54 | - | 5.65 | GCCAATCACC
 |  | Pdia4 | -98 | -88 | + | 6.05 | CGTGATTGGT
 |  | Pfkp | -51 | -41 | - | 6.01 | GCCCATCGCC
 |  | Pgap1 | -131 | -121 | - | 5.6 | CACAATCTCG
 |  | Rragc | -123 | -113 | + | 5.53 | CGTGATAGTA
 |  | Slc12a6 | 21 | 31 | - | 5.98 | CCGCATCAGC
 |  | Slc36a1 | -19 | -9 | - | 5.99 | CAGCATCACG
 |  | Smyd3 | -75 | -65 | - | 6.25 | CCCCATCCCG
 |  | Syvn1 | -45 | -35 | - | 5.67 | ACCAATCGGC
 |  | Tbccd1 | -56 | -46 | - | 5.92 | ACCAATCGCG
 |  | Wdr81 | 14 | 24 | - | 5.98 | CCGCATCAGC
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
22 | [NAME] | Egr-1 | 17.4600094237 | 0.677586769064 | - 58 : 25 | 2.86563067872e-07
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | Fam189b | -11 | 1 | - | 7.55 | CCTCCTCCGCAC
 |  | Fam189b | 21 | 33 | - | 3.53 | CCACCTCCACAG
 |  | Acp6 | 17 | 29 | + | 4.17 | GTCCGTGGGAGG
 |  | Manf | -46 | -34 | + | 2.73 | ATGGGTGGGCGC
 |  | Atp6v0b | -44 | -32 | + | 2.74 | GTGCGCGGGGGT
 |  | Creld2 | 22 | 34 | - | 3.03 | ACTCCGCCGCAG
 |  | Dock11 | -57 | -45 | + | 2.95 | GCGCGCGGGAGG
 |  | Eno2 | 11 | 23 | - | 3.43 | CCACCCGCGCTC
 |  | Erbb2 | -16 | -4 | + | 4.76 | CGGCGGAGGAGG
 |  | Gga2 | -32 | -20 | + | 2.83 | GCGTGGGGGCGG
 |  | Hyou1 | 2 | 14 | + | 4.43 | TCTCGTGGGCGG
 |  | Lmbr1l | -34 | -22 | - | 5.07 | CCGCCCAGGCCT
 |  | Map3k1 | -17 | -5 | - | 8.35 | CCTCCCCCGCAG
 |  | Map3k1 | 25 | 37 | + | 3.61 | TGGCGGCGGCGG
 |  | Mpp5 | 2 | 14 | + | 3.33 | AGGAGGGGGCGG
 |  | Pdia4 | 20 | 32 | + | 4.4 | CGGTGTAGGCGG
 |  | Pdia6 | -15 | -3 | - | 5.9 | CCGCCTCCGCGC
 |  | Pfkp | -19 | -7 | + | 9.07 | GGGCGTGGGCGG
 |  | Pgap1 | -57 | -45 | + | 4.12 | TTGCGCAGGCGC
 |  | Pgm2l1 | -35 | -23 | + | 5.46 | GTGCAGAGGCGG
 |  | Pi4k2b | -58 | -46 | + | 7.66 | CTGCGCAGGCGT
 |  | Pi4k2b | -17 | -5 | + | 3.08 | GGGCGTGGCCGG
 |  | Pi4k2b | 0 | 12 | + | 3.08 | GGGCGTGGCCGG
 |  | Rab3gap2 | -39 | -27 | - | 4.15 | CCGCCCCCCCAG
 |  | Rragc | -4 | 8 | + | 3.32 | TGCCGGGGGCGG
 |  | Rragc | 24 | 36 | + | 3.35 | CTGGGGAGGCGG
 |  | Sdf2l1 | -20 | -8 | + | 3.28 | TGCCGTGGGAGG
 |  | Slc24a6 | 2 | 14 | + | 8.47 | TTGTGGGGGCGT
 |  | Smyd3 | -52 | -40 | - | 7.55 | CCTCCTGCGCAT
 |  | Snx30 | -16 | -4 | + | 6.7 | CCGCGGGGGCGG
 |  | Snx30 | 3 | 15 | + | 5.13 | AGCCGTGGGCGG
 |  | Snx8 | -40 | -28 | + | 10.98 | TGGCGTGGGCGG
 |  | Snx8 | -16 | -4 | + | 3.58 | GGGCGCGGGAGG
 |  | Snx8 | -1 | 11 | + | 2.7 | TCACGTGGGCGA
 |  | Syvn1 | -14 | -2 | - | 7.63 | ACTCCTACACAA
 |  | Tbc1d8b | -20 | -8 | + | 4.17 | CTCCGTGGGAGG
 |  | Vps13a | -43 | -31 | - | 3.14 | ACGCCCCCACGC
 |  | Wdr7 | -48 | -36 | + | 2.84 | TTGCAGCGGCGT
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
23 | V$NFY_C | NF-Y | 19.0425781706 | 0.424078402775 | -92:-25 | 6.34375020835e-07
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 2700049A03Rik | -92 | -78 | - | 1.01 | AGTGCCCAAGCAAA
 |  | Creg1 | -55 | -41 | + | 3.5 | TCTGATTGGCTTTC
 |  | Cth | -85 | -71 | - | 3.97 | GCCGACCAATAAGC
 |  | Cth | -48 | -34 | + | 1.52 | GATGATTGGTTGCG
 |  | D6Wsu116e | -50 | -36 | - | 0.26 | AGCTCCCGATCAGA
 |  | Ddit3 | -62 | -48 | + | 10.92 | TCTGATTGGTAGGC
 |  | Dnajb11 | -83 | -69 | + | 8.51 | TCTGATTGGCTTCC
 |  | Dnajb11 | -40 | -26 | + | 7.03 | GCTGATTGGCTGCG
 |  | Eif2ak3 | -89 | -75 | + | 10.64 | [NAME]
 |  | Eif2ak3 | -25 | -11 | - | 0.51 | CGCAACCAATCGCA
 |  | Erbb2 | -32 | -18 | - | 2.99 | GGCTCCCAATCACC
 |  | Fnip1 | -57 | -43 | - | 4.13 | GCCAGCCAATCGCC
 |  | [NAME] | -59 | -45 | + | 5.39 | GTTCATTGGCTGCT
 |  | [NAME] | -92 | -78 | - | 1.07 | CTCAACCAATCATC
 |  | [NAME] | -53 | -39 | - | 14.67 | ACTAGCCAATCAGG
 |  | Nans | -30 | -16 | + | 1.69 | TCCGATTGGCTGTC
 |  | Nbas | -68 | -54 | - | 3.2 | CTCTGCCAATCACC
 |  | Pdia4 | -80 | -66 | - | 3.04 | CACAGCCAATCAGA
 |  | Pdia6 | -59 | -45 | - | 0.5 | AGAGACCAATGAAA
 |  | Sdf2l1 | -30 | -16 | + | 0.14 | GACGATTGGCTGCC
 |  | Slc24a6 | -26 | -12 | + | 0.86 | CCCGACTGGCAAGT
 |  | Slc25a27 | -76 | -62 | - | 13.39 | ACCAGCCAATCAGA
 |  | Strbp | -91 | -77 | - | 1.2 | GGGAGCGAATCAAG
 |  | Syvn1 | -73 | -59 | + | 0.82 | TCTCATTGGTCCGC
 |  | Syvn1 | -49 | -35 | - | 1.06 | CGCAACCAATCGGC
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
24 | V$CREB_Q4 | CREB | 13.0218214916 | 0.562499997516 | - 173 : 7 | 5.69734413288e-06
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 6230409E13Rik | -70 | -58 | + | 6.97 | GGTGACATTATC
 |  | 6230409E13Rik | -3 | 9 | + | 5.6 | GCTGACACAAAG
 |  | Atp6ap2 | -106 | -94 | + | 8.46 | GCTGACGTCGAC
 |  | Atp6v0b | -85 | -73 | + | 5.05 | CATGACGTCTAC
 |  | Bnip3l | -34 | -22 | + | 10.23 | CCTGACGTCACG
 |  | Calr | 3 | 15 | - | 5.69 | GGCTGTGTCAGG
 |  | Clcn3 | -3 | 9 | + | 10.38 | GCTGACGTCACG
 |  | Cpox | -173 | -161 | - | 6.02 | TTTGTCGTCAGC
 |  | D6Wsu116e | -3 | 9 | + | 4.92 | CGTGACGTGAAC
 |  | Dnajb11 | -134 | -122 | + | 6.49 | TCTGACGTTTTC
 |  | E430025E21Rik | -85 | -73 | - | 5.35 | CTCTGCGTCATC
 |  | Erbb2 | -162 | -150 | - | 6.61 | CGAGGCGTCAGG
 |  | Fzd3 | -130 | -118 | - | 7 | CAAGACGTCACT
 |  | Herpud1 | -141 | -129 | + | 8.08 | GATGACGCAACC
 |  | Hyou1 | -131 | -119 | + | 4.76 | CGTGACGTGGCC
 |  | Lmbr1l | -22 | -10 | - | 6.32 | TGTGTCGTCACT
 |  | Ppp1r15a | -107 | -95 | - | 4.91 | GGTGACCTCACA
 |  | Ppp1r15a | -14 | -2 | + | 11.24 | GGTGACGTCAGC
 |  | Pgm2l1 | -130 | -118 | - | 6.38 | TGAGGCGTCACG
 |  | Plekhb2 | 1 | 13 | + | 8.1 | GGTGACGCAGGA
 |  | Ppp2r5b | -29 | -17 | + | 8.59 | CCTGACGCAGCC
 |  | Rragc | -172 | -160 | + | 7.47 | CGTGACGCCTCC
 |  | Samd8 | -72 | -60 | + | 7.93 | CATGACGCAAGC
 |  | Serac1 | -86 | -74 | - | 6.11 | CCGTACGTCATC
 |  | Slc12a6 | -78 | -66 | + | 5.06 | GGTCACGTAACG
 |  | Tbccd1 | -153 | -141 | - | 6.49 | GAAAACGTCAGA
 |  | Wdr7 | -44 | -32 | - | 7.33 | AGCGGCGTCACG
 |  | Wdr7 | -23 | -11 | - | 5.62 | GCCGGTGTCAGC
 |  | Wdr7 | 7 | 19 | - | 5.62 | GCCGGTGTCAGC
Results for Cluster 4:
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
1 | V$SP1_Q6 | Sp1 | 11.6644098901 | 0.789173803608 | -98:-10 | 1.73490074174e-32
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 1110012J17Rik | -95 | -82 | - | 10.42 | AGCCCCGCCTCCT
 |  | 1110012J17Rik | -79 | -66 | - | 12.23 | CGCCCCGCCCCCT
 |  | 1110012J17Rik | -51 | -38 | + | 10.59 | AGGAGGCGGGGCG
 |  | 2310014H01Rik | -81 | -68 | - | 5.89 | GGCCACACCCCAT
 |  | 2310014H01Rik | -68 | -55 | - | 8.48 | GGACCCGCCCCAT
 |  | Fam64a | -74 | -61 | + | 7.42 | CAGGGGCAGGGCC
 |  | Angptl4 | -52 | -39 | - | 10.54 | CGCTCCGCCCCCG
 |  | Angptl4 | -39 | -26 | - | 10.35 | GGCCCCGCCTCCA
 |  | Angptl4 | -22 | -9 | - | 5.95 | TCTCCCTCCCACT
 |  | Anxa3 | -61 | -48 | + | 7.21 | AAGGGGAGGGCTT
 |  | Anxa3 | -44 | -31 | + | 9.2 | GGGGGGCGTGGTG
 |  | Arl4c | -44 | -31 | - | 6.5 | GACCCCGCCTGAC
 |  | Arl4c | -20 | -7 | + | 8.81 | GCGGGGCGTGGCG
 |  | Arrdc3 | -83 | -70 | + | 6.37 | CGCGGGAGGGAGC
 |  | Bhlhe40 | -97 | -84 | - | 6.06 | GGCTCGTCCCCTC
 |  | Bhlhe40 | -83 | -70 | - | 5.74 | AGCAACTCCCCCC
 |  | Bhlhe40 | -66 | -53 | - | 10.38 | CGCCCCGCCCGCT
 |  | Bhlhe40 | -30 | -17 | - | 7.45 | CCTCCCGCCTCTC
 |  | Bnc1 | -51 | -38 | - | 6.51 | GGAGCCGCCCACT
 |  | Bnc1 | -26 | -13 | + | 11.2 | GGGGGGCGGGGGT
 |  | Capn2 | -10 | 3 | + | 8.67 | GGGAGGCGGAGGC
 |  | Ccnd1 | -97 | -84 | - | 10.07 | GCCCCCTCCCCCT
 |  | Ccnd1 | -84 | -71 | - | 6.36 | GCACCCGCCTCGG
 |  | Ccnd1 | -68 | -55 | - | 8.6 | TCCCCCTCCCCCT
 |  | Clcf1 | -15 | -2 | - | 5.78 | AAGCCCTCCCTTC
 |  | Col12a1 | -40 | -27 | - | 5.74 | TCTCCCTCCCTCC
 |  | Col1a2 | -84 | -71 | + | 5.7 | GATGGGAGGTGTG
 |  | Dusp5 | -89 | -76 | - | 6.15 | AGCTCCACCCATG
 |  | Dusp5 | -63 | -50 | + | 8.16 | AGGGGGCGGGGAA
 |  | Dusp6 | -86 | -73 | - | 6.26 | GGCCCGTCCCCAC
 |  | E2f8 | -84 | -71 | + | 6.94 | AGCGGGCGTGGGG
 |  | E2f8 | -13 | 0 | + | 6.44 | CGGGGGCTGGACT
 |  | Egr2 | -81 | -68 | + | 8.07 | TCGGGGCGGCGCG
 |  | Egr2 | -31 | -18 | + | 6.02 | GAGGGGCGGCTGC
 |  | Egr2 | -12 | 1 | - | 8.21 | CCTCCCGCCCACG
 |  | Ehbp1l1 | -95 | -82 | - | 5.99 | CCTTCCACCCCCG
 |  | Ehbp1l1 | -31 | -18 | - | 11.3 | CGCCCCGCCCCGC
 |  | Ehbp1l1 | -13 | 0 | - | 10.3 | AGCCCCGCCCGCC
 |  | Elk3 | -75 | -62 | - | 8.49 | GGCTCCTCCCCTG
 |  | Elk3 | -45 | -32 | + | 6.74 | GCGGGGCGGGCAC
 |  | Elk3 | -19 | -6 | + | 5.91 | GCGGGGCGTGCGG
 |  | Emp1 | -68 | -55 | + | 5.85 | GCAGGGCGTAGCT
 |  | Enpp1 | -68 | -55 | + | 7.36 | CGCGGGCGGGGAC
 |  | Enpp1 | -34 | -21 | - | 5.89 | AGACACGCCCACG
 |  | Ets1 | -68 | -55 | - | 7.26 | GACCACACCCCCC
 |  | F2r | -60 | -47 | - | 10.24 | AGCCCCGCCCCAC
 |  | Fez1 | -64 | -51 | + | 6.16 | CCAGGGTGGGGGG
 |  | Fhdc1 | -56 | -43 | - | 11.7 | GGCCCCGCCCCTC
 |  | Fhdc1 | -43 | -30 | - | 7.28 | CGCACCGCCCTGC
 |  | Fhl3 | -76 | -63 | + | 7.23 | TGCGGGCGGGTTG
 |  | Fhl3 | -57 | -44 | + | 11.4 | CGGGGGCGGGGTC
 |  | Fhl3 | -41 | -28 | + | 9.57 | GCGGGGCGGGCCC
 |  | Flnc | -67 | -54 | + | 8.7 | TGGAGGAGGGGCG
 |  | Flnc | -52 | -39 | + | 10.39 | CGGAGGCGGGGCC
 |  | Flnc | -30 | -17 | - | 5.99 | AGCGCGGCCCCCA
 |  | Flnc | -15 | -2 | + | 7.03 | CGCGGGCCGGGCG
 |  | Fosl1 | -55 | -42 | + | 10.06 | GGGGGGCGTGGCC
 |  | Fosl2 | -78 | -65 | + | 8.15 | CGGGGGCGGAAGG
 |  | Fosl2 | -58 | -45 | + | 8.34 | CAGGGGAGGGACC
 |  | Fosl2 | -25 | -12 | + | 7.69 | AGAGGGAGGGACT
 |  | [NAME] | -67 | -54 | + | 6.34 | CGCGGGAGGGGGA
 |  | [NAME] | -50 | -37 | + | 9.95 | AGGGGGCGGTGCC
 |  | [NAME] | -35 | -22 | + | 11.13 | GCGGGGCGGGGCT
 |  | Id1 | -93 | -80 | - | 6.63 | AGCCACGCCTCTA
 |  | Id1 | -51 | -38 | - | 6.99 | GAACCCGCCCTTG
 |  | Id3 | -19 | -6 | + | 8.29 | GGGGGGAGGGGAC
 |  | Il1rap | -70 | -57 | + | 8.69 | CGCGGGCGGAGCG
 |  | Il1rap | -47 | -34 | + | 6.75 | CGTGGGTGGAGTC
 |  | Klf10 | -64 | -51 | - | 10.93 | GGCCCCGCCCTCT
 |  | Klf10 | -11 | 2 | + | 8.83 | ACGGGGAGGGGGG
 |  | Klf4 | -91 | -78 | + | 6.46 | TGGCGGCGGAGCC
 |  | Klf4 | -66 | -53 | + | 6.25 | ACAGGGAGGAGGC
 |  | Klhdc8a | -97 | -84 | - | 6.48 | CTCTCCGCCTCCT
 |  | Klhdc8a | -62 | -49 | - | 8.69 | ACGCCCGCCCCCA
 |  | Lamb1 | -76 | -63 | + | 7.31 | GGGAGGTGGGACC
 |  | Lamb1 | -54 | -41 | - | 7.64 | ACCCCCACCCCTA
 |  | Lamb1 | -29 | -16 | - | 8.75 | TCCTCCGCCCCCT
 |  | Lbh | -69 | -56 | + | 10.06 | GAGAGGCGGGGCC
 |  | Lbh | -45 | -32 | - | 11.31 | AGCCCCGCCCCTC
 |  | [NAME] | -66 | -53 | - | 8.43 | AGCTCCTCCCCGC
 |  | [NAME] | -15 | -2 | - | 8.7 | GACTCCTCCCCCG
 |  | Lima1 | -74 | -61 | + | 7.04 | GGGAGGCGGGAGA
 |  | Lima1 | -43 | -30 | + | 12.06 | AGGGGGCGGGGCT
 |  | Lima1 | -26 | -13 | + | 7.63 | GCGGGGCCGGGGC
 |  | [NAME] | -81 | -68 | - | 10.57 | TGCCCCGCCCCCG
 |  | [NAME] | -44 | -31 | - | 8.06 | CACCCCTCCTCCA
 |  | Mab21l1 | -55 | -42 | - | 5.92 | CCGCCCGCCTGCC
 |  | Marveld1 | -65 | -52 | + | 5.98 | GCTGGGAGGCGCG
 |  | Met | -85 | -72 | + | 7.35 | GAAGGGCGGGGAC
 |  | Met | -69 | -56 | - | 5.82 | AACCCCCCCCCCC
 |  | Midn | -87 | -74 | - | 8.14 | TGCCCGGCCCCCC
 |  | Midn | -45 | -32 | + | 6.49 | GGAAGGCGGCGCG
 |  | Midn | -20 | -7 | - | 6.07 | GGGGCCGCCCGCC
 |  | Msh6 | -78 | -65 | + | 10.19 | CGCGGGCGGGGCC
 |  | Myc | -53 | -40 | - | 8.11 | ATCCCCGCCCACC
 |  | Myo1c | -34 | -21 | - | 8.15 | AGCCCCTCCTCTT
 |  | Nrp1 | -73 | -60 | + | 5.71 | TCTGGGAGGGAGG
 |  | Nrp1 | -47 | -34 | + | 7.05 | GAGAGGCGGGTGC
 |  | Nuak2 | -54 | -41 | + | 8.07 | [NAME]
 |  | Nudt4 | -95 | -82 | - | 8.33 | ACCCCCGCCCGGC
 |  | Osr1 | -73 | -60 | + | 6.34 | GGGGGGCAGGGGA
 |  | Osr1 | -38 | -25 | + | 9.01 | AAGGGGAGGGGGG
 |  | Osr1 | -23 | -10 | + | 6.1 | AGGGGGAGGTGGA
 |  | Pdlim5 | -81 | -68 | + | 8.07 | TGGGGGCGTGACC
 |  | Pdlim5 | -66 | -53 | + | 9.5 | TAGGGGAGGGGCG
 |  | Pdlim5 | -39 | -26 | + | 9.66 | GCGAGGCGGGGCG
 |  | Pdlim5 | -22 | -9 | + | 6.34 | [NAME]
 |  | Rhoj | -22 | -9 | - | 5.87 | TCCCCGGCCCACT
 |  | Rrm2 | -23 | -10 | - | 9.97 | GGCCACGCCCCCT
 |  | S100a4 | -52 | -39 | + | 6.2 | CATGGGCAGGGCC
 |  | Serpine1 | -77 | -64 | + | 8.69 | [NAME]
 |  | Sertad4 | -69 | -56 | + | 7.75 | TGCGGGCGGGAGC
 |  | Sertad4 | -42 | -29 | + | 8.28 | CGAGGGCGGAGGC
 |  | Sertad4 | -25 | -12 | + | 9.8 | CGGGGGCGGAGGC
 |  | Sertad4 | -10 | 3 | + | 9.74 | GGCGGGCGGGGGC
 |  | [NAME] | -78 | -65 | - | 6.25 | AGCCTCGCCCCCC
 |  | [NAME] | -64 | -51 | - | 5.67 | CCCCCCCCCCCCC
 |  | [NAME] | -16 | -3 | - | 7 | GCCGCCGCCCCAC
 |  | Smad7 | -20 | -7 | - | 6.58 | CGCTCGGCCCCGG
 |  | Snai1 | -66 | -53 | + | 7.7 | AAGGGGCGTGACC
 |  | Snai1 | -45 | -32 | - | 8.07 | GGTCACGCCCCCA
 |  | Socs5 | -92 | -79 | + | 7.4 | AGGGGGAGGCGGC
 |  | Socs5 | -75 | -62 | + | 8.5 | AAGGGGTGGGGGC
 |  | Ston1 | -92 | -79 | - | 7.04 | AACACCTCCCCCA
 |  | Ston1 | -74 | -61 | - | 6.15 | ATCCCCACCCCGC
 |  | Ston1 | -52 | -39 | - | 7.52 | [NAME]
 |  | Ston1 | -36 | -23 | - | 5.74 | TCTCCCTCCCTCC
 |  | Ston1 | -11 | 2 | - | 6.39 | CCTTCCTCCCCTC
 |  | Styk1 | -51 | -38 | - | 5.9 | CGCTCCTCCTTCA
 |  | Styk1 | -26 | -13 | - | 7.75 | AGCCACGCCCCAC
 |  | Tgfb3 | -67 | -54 | - | 8.16 | GGTCCCTCCCTCC
 |  | Tgfb3 | -30 | -17 | + | 5.94 | CATGGGAGGGAGG
 |  | Thy1 | -77 | -64 | - | 9.44 | CACCCCACCCCCT
 |  | Thy1 | -26 | -13 | - | 6.75 | [NAME]
 |  | Trib1 | -98 | -85 | - | 10.22 | GCCTCCGCCCCCT
 |  | Trib1 | -22 | -9 | + | 7.05 | GGGGGGCGTGTGC
 |  | Trib2 | -66 | -53 | + | 7.3 | CAGGGGCCGGGGC
 |  | Trib2 | -49 | -36 | + | 9.1 | GTAGGGCGGGGCC
 |  | Trib2 | -31 | -18 | + | 9.98 | AGAGGGCGGGGGC
 |  | Trim59 | -43 | -30 | + | 7.5 | CGGAGGCGGCGCG
 |  | Zbtb37 | -85 | -72 | + | 9.32 | GAGGGGAGGGGGC
 |  | Zbtb37 | -55 | -42 | + | 9.61 | TGGGGGTGGGGCG
 |  | Zcchc24 | -70 | -57 | - | 6.92 | GTGCCCGCCCCTC
 |  | Zcchc24 | -56 | -43 | + | 7.07 | GCCGGGAGGGGGG
 |  | Zcchc24 | -30 | -17 | + | 9.59 | CCGGGGAGGGGCC
 |  | [NAME] | -93 | -80 | + | 6.86 | GGGAGGAGGGAGG
 |  | [NAME] | -13 | 0 | + | 8.19 | CGGGGGCGGTGGT
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
2 | V$GC_01 | GC box | 11.5380830882 | 0.682481751374 | -109:-10 | 7.38836076632e-24
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 1110012J17Rik | -96 | -82 | - | 11.46 | CAGCCCCGCCTCCT
 |  | 1110012J17Rik | -80 | -66 | - | 11.78 | CCGCCCCGCCCCCT
 |  | 1110012J17Rik | -51 | -37 | + | 10.59 | AGGAGGCGGGGCGT
 |  | 2310014H01Rik | -82 | -68 | - | 6.88 | GGGCCACACCCCAT
 |  | 6330406I15Rik | -74 | -60 | + | 6.15 | TCTGGGCAGAGCAG
 |  | Fam64a | -74 | -60 | + | 8.65 | CAGGGGCAGGGCCA
 |  | Angptl4 | -53 | -39 | - | 9.1 | TCGCTCCGCCCCCG
 |  | Anxa3 | -88 | -74 | + | 6.29 | TGGAGGAGGATGTG
 |  | Anxa3 | -61 | -47 | + | 8.09 | AAGGGGAGGGCTTG
 |  | Anxa3 | -44 | -30 | + | 8.74 | GGGGGGCGTGGTGG
 |  | Arl4c | -20 | -6 | + | 8.29 | GCGGGGCGTGGCGG
 |  | Bhlhe40 | -84 | -70 | - | 7.27 | CAGCAACTCCCCCC
 |  | Bhlhe40 | -67 | -53 | - | 8.64 | CCGCCCCGCCCGCT
 |  | Bhlhe40 | -31 | -17 | - | 6.18 | CCCTCCCGCCTCTC
 |  | Bnc1 | -26 | -12 | + | 10.33 | GGGGGGCGGGGGTG
 |  | Capn2 | -10 | 4 | + | 6.66 | GGGAGGCGGAGGCC
 |  | Ccnd1 | -98 | -84 | - | 9.53 | AGCCCCCTCCCCCT
 |  | Ccnd1 | -75 | -61 | - | 7.26 | TCGGCCCTCCCCCT
 |  | Col12a1 | -109 | -95 | - | 6.25 | CTAGCCCGCCCCAA
 |  | Dusp5 | -90 | -76 | - | 8.58 | AAGCTCCACCCATG
 |  | Ehbp1l1 | -32 | -18 | - | 8.82 | TCGCCCCGCCCCGC
 |  | Ehbp1l1 | -14 | 0 | - | 8.73 | CAGCCCCGCCCGCC
 |  | Elk3 | -76 | -62 | - | 9.23 | AGGCTCCTCCCCTG
 |  | Enpp1 | -35 | -21 | - | 7.68 | AAGACACGCCCACG
 |  | Ets1 | -69 | -55 | - | 7.03 | TGACCACACCCCCC
 |  | F2r | -61 | -47 | - | 9.2 | GAGCCCCGCCCCAC
 |  | F2r | -43 | -29 | - | 6.07 | CTGAACCGCCTCCA
 |  | Fez1 | -35 | -21 | + | 6.24 | AGTGGGAAGTGTTG
 |  | Fhdc1 | -57 | -43 | - | 11.43 | CGGCCCCGCCCCTC
 |  | Fhdc1 | -39 | -25 | - | 10.21 | CCGCCCTGCCCCCT
 |  | Fhl3 | -96 | -82 | + | 11.39 | AGGGGGCGGGGTCT
 |  | Fhl3 | -76 | -62 | + | 6.1 | TGCGGGCGGGTTGG
 |  | Fhl3 | -57 | -43 | + | 9.05 | [NAME]
 |  | Fhl3 | -41 | -27 | + | 7.92 | GCGGGGCGGGCCCG
 |  | Flnc | -104 | -90 | - | 8.35 | CGCCCCCACCCCAT
 |  | Flnc | -67 | -53 | + | 9.31 | TGGAGGAGGGGCGG
 |  | Flnc | -52 | -38 | + | 10.24 | CGGAGGCGGGGCCG
 |  | Fosl1 | -55 | -41 | + | 10.05 | GGGGGGCGTGGCCG
 |  | Fosl2 | -78 | -64 | + | 6.45 | CGGGGGCGGAAGGG
 |  | Fosl2 | -58 | -44 | + | 7.98 | CAGGGGAGGGACCG
 |  | Fosl2 | -25 | -11 | + | 6.74 | AGAGGGAGGGACTC
 |  | [NAME] | -50 | -36 | + | 10.34 | AGGGGGCGGTGCCG
 |  | [NAME] | -35 | -21 | + | 9.11 | GCGGGGCGGGGCTC
 |  | Id1 | -94 | -80 | - | 9.51 | AAGCCACGCCTCTA
 |  | Id1 | -52 | -38 | - | 6.78 | TGAACCCGCCCTTG
 |  | Id1 | -11 | 3 | - | 6.84 | GCGCTCTGCCCTCT
 |  | Il1rap | -47 | -33 | + | 7.61 | CGTGGGTGGAGTCT
 |  | Klf10 | -65 | -51 | - | 11.09 | AGGCCCCGCCCTCT
 |  | Klf10 | -11 | 3 | + | 6.34 | ACGGGGAGGGGGGC
 |  | Klf4 | -104 | -90 | + | 12.21 | AGGGGGCGGGGCCT
 |  | Klf4 | -66 | -52 | + | 6.45 | ACAGGGAGGAGGCG
 |  | Klhdc8a | -63 | -49 | - | 8.36 | AACGCCCGCCCCCA
 |  | Lamb1 | -76 | -62 | + | 7.07 | GGGAGGTGGGACCT
 |  | Lamb1 | -55 | -41 | - | 9.39 | AACCCCCACCCCTA
 |  | Lamb1 | -30 | -16 | - | 7.05 | GTCCTCCGCCCCCT
 |  | Lbh | -69 | -55 | + | 10.32 | GAGAGGCGGGGCCG
 |  | Lbh | -46 | -32 | - | 11.65 | AAGCCCCGCCCCTC
 |  | [NAME] | -67 | -53 | - | 8.62 | AAGCTCCTCCCCGC
 |  | [NAME] | -16 | -2 | - | 8.56 | AGACTCCTCCCCCG
 |  | Lima1 | -43 | -29 | + | 11.09 | AGGGGGCGGGGCTC
 |  | Lima1 | -20 | -6 | + | 10.09 | CCGGGGCGGGGCCG
 |  | [NAME] | -82 | -68 | - | 8.43 | GTGCCCCGCCCCCG
 |  | [NAME] | -45 | -31 | - | 8.5 | CCACCCCTCCTCCA
 |  | Mab21l1 | -42 | -28 | - | 7.13 | TGGCCCTGCCTTTA
 |  | Marveld1 | -55 | -41 | + | 6.74 | GCGAGGAGGGGTGG
 |  | Met | -90 | -76 | + | 5.72 | TGCGGGAAGGGCGG
 |  | Met | -47 | -33 | + | 5.95 | CAAGGGTGGTGCCA
 |  | Midn | -81 | -67 | - | 8.61 | GCCCCCCGCCCCTT
 |  | Midn | -59 | -45 | - | 7.6 | AAACTCCACCCCAG
 |  | Msh6 | -107 | -93 | - | 10.06 | CCGCCCCGCCCATC
 |  | Msh6 | -78 | -64 | + | 6.72 | CGCGGGCGGGGCCC
 |  | Myc | -46 | -32 | - | 7.48 | CCCACCCGCCCTTT
 |  | Myo1c | -35 | -21 | - | 10.18 | CAGCCCCTCCTCTT
 |  | Nrp1 | -107 | -93 | + | 7.63 | GCGGGGAGGGGGCG
 |  | Nrp1 | -85 | -71 | + | 6.56 | GGAGGGAAGGGCTC
 |  | Nrp1 | -69 | -55 | + | 6.35 | GGAGGGAGGGGGAG
 |  | Nrp1 | -47 | -33 | + | 5.78 | GAGAGGCGGGTGCC
 |  | Nuak2 | -54 | -40 | + | 7.88 | CAGGGGCGTGGTCA
 |  | Nudt4 | -102 | -88 | - | 7.26 | CCACCCTACCCCCG
 |  | Osr1 | -73 | -59 | + | 7.03 | GGGGGGCAGGGGAG
 |  | Osr1 | -38 | -24 | + | 8.88 | AAGGGGAGGGGGGT
 |  | Osr1 | -23 | -9 | + | 6.15 | AGGGGGAGGTGGAT
 |  | Pdlim5 | -103 | -89 | - | 8.44 | TGGCCCCGCCCAGC
 |  | Pdlim5 | -81 | -67 | + | 7.46 | TGGGGGCGTGACCA
 |  | Pdlim5 | -66 | -52 | + | 10.21 | TAGGGGAGGGGCGT
 |  | Pdlim5 | -39 | -25 | + | 7.7 | GCGAGGCGGGGCGA
 |  | Pdlim5 | -22 | -8 | + | 6.05 | [NAME]
 |  | Pi15 | -101 | -87 | - | 11.22 | AAGCCCCTCCCCTT
 |  | Pi15 | -63 | -49 | - | 6.17 | AGAGCCTGCCCTTT
 |  | Rrm2 | -24 | -10 | - | 10.68 | AGGCCACGCCCCCT
 |  | S100a4 | -52 | -38 | + | 8.69 | CATGGGCAGGGCCT
 |  | Sdpr | -43 | -29 | + | 6.85 | TAAGGGAAGGGGTG
 |  | Serpine1 | -77 | -63 | + | 10.49 | AGTGGGTGGGGCTG
 |  | Sertad4 | -109 | -95 | - | 7.27 | AGCCCCTGCCTCCC
 |  | Sertad4 | -42 | -28 | + | 7.93 | CGAGGGCGGAGGCG
 |  | Sertad4 | -25 | -11 | + | 8.05 | CGGGGGCGGAGGCA
 |  | Sertad4 | -10 | 4 | + | 6.89 | GGCGGGCGGGGGCG
 |  | [NAME] | -79 | -65 | - | 6.91 | AAGCCTCGCCCCCC
 |  | [NAME] | -12 | 2 | - | 8.68 | CCGCCCCACCCCAC
 |  | Snai1 | -66 | -52 | + | 7.53 | AAGGGGCGTGACCA
 |  | Snai1 | -46 | -32 | - | 8.45 | CGGTCACGCCCCCA
 |  | Socs5 | -75 | -61 | + | 9.31 | AAGGGGTGGGGGCT
 |  | Ston1 | -93 | -79 | - | 6.98 | GAACACCTCCCCCA
 |  | Ston1 | -53 | -39 | - | 6.93 | CGGGCCCTCCTCCC
 |  | Ston1 | -33 | -19 | - | 6.16 | CCCTCCCTCCCCTC
 |  | Styk1 | -52 | -38 | - | 5.94 | GCGCTCCTCCTTCA
 |  | Styk1 | -27 | -13 | - | 9.17 | CAGCCACGCCCCAC
 |  | Tgfb3 | -68 | -54 | - | 6.23 | TGGTCCCTCCCTCC
 |  | Tgfb3 | -54 | -40 | - | 5.99 | CTCCCCCACCCCAG
 |  | Thy1 | -78 | -64 | - | 9.75 | CCACCCCACCCCCT
 |  | Trib1 | -99 | -85 | - | 8.98 | TGCCTCCGCCCCCT
 |  | Trib1 | -22 | -8 | + | 7.01 | GGGGGGCGTGTGCG
 |  | Trib2 | -60 | -46 | + | 6.33 | CCGGGGCGTGGGTA
 |  | Trib2 | -31 | -17 | + | 9.55 | AGAGGGCGGGGGCT
 |  | Zbtb37 | -85 | -71 | + | 8.68 | GAGGGGAGGGGGCT
 |  | Zbtb37 | -55 | -41 | + | 10.35 | TGGGGGTGGGGCGG
 |  | Zcchc24 | -30 | -16 | + | 8.95 | CCGGGGAGGGGCCG
 |  | [NAME] | -86 | -72 | + | 7 | GGGAGGTGGGGTAG
 |  | [NAME] | -38 | -24 | + | 6.15 | CTGGGGAAGGGTGG
 |  | [NAME] | -13 | 1 | + | 8.17 | CGGGGGCGGTGGTG
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
3 | V$SP1_01 | Sp1 | 8.90287601109 | 0.718181824684 | -84:-17 | 3.118866937e-19
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 1110012J17Rik | -83 | -73 | - | 7.9 | TGCCCGCCCC
 |  | 1110012J17Rik | -49 | -39 | + | 8.06 | GAGGCGGGGC
 |  | 2310014H01Rik | -67 | -57 | - | 6.82 | GACCCGCCCC
 |  | Fam64a | -72 | -62 | + | 8.06 | GGGGCAGGGC
 |  | Angptl4 | -51 | -41 | - | 6.69 | GCTCCGCCCC
 |  | Angptl4 | -38 | -28 | - | 8.06 | GCCCCGCCTC
 |  | Anxa3 | -42 | -32 | + | 8.99 | GGGGCGTGGT
 |  | Arl4c | -43 | -33 | - | 7.38 | ACCCCGCCTG
 |  | Arl4c | -18 | -8 | + | 7.9 | GGGGCGTGGC
 |  | Bhlhe40 | -79 | -69 | - | 6.4 | ACTCCCCCCC
 |  | Bhlhe40 | -65 | -55 | - | 6.98 | GCCCCGCCCG
 |  | Bhlhe40 | -41 | -31 | - | 6.68 | ACCCCCCCTT
 |  | Ccnd1 | -72 | -62 | - | 6.68 | GCCCTCCCCC
 |  | Clcf1 | -58 | -48 | - | 7.62 | ACCACCCCCC
 |  | Col12a1 | -38 | -28 | - | 6.39 | TCCCTCCCTC
 |  | Col12a1 | -27 | -17 | - | 9.15 | TCCCCGCCCC
 |  | Dusp5 | -78 | -68 | + | 7.9 | TGGGCGTGGT
 |  | Dusp5 | -61 | -51 | + | 9.15 | GGGGCGGGGA
 |  | Ehbp1l1 | -30 | -20 | - | 8.75 | GCCCCGCCCC
 |  | Elk3 | -43 | -33 | + | 7.9 | GGGGCGGGCA
 |  | Enpp1 | -66 | -56 | + | 7.38 | CGGGCGGGGA
 |  | Ets1 | -67 | -57 | - | 6.94 | ACCACACCCC
 |  | F2r | -59 | -49 | - | 8.75 | GCCCCGCCCC
 |  | Fez1 | -57 | -47 | + | 6.93 | GGGGGGTGGA
 |  | Fhdc1 | -55 | -45 | - | 8.75 | GCCCCGCCCC
 |  | Fhdc1 | -42 | -32 | - | 6.28 | GCACCGCCCT
 |  | Fhl3 | -74 | -64 | + | 6.14 | CGGGCGGGTT
 |  | Fhl3 | -55 | -45 | + | 9.84 | GGGGCGGGGT
 |  | Fhl3 | -44 | -34 | + | 6.98 | CGGGCGGGGC
 |  | Flnc | -50 | -40 | + | 8.06 | GAGGCGGGGC
 |  | Fosl1 | -53 | -43 | + | 7.9 | GGGGCGTGGC
 |  | Fosl2 | -57 | -47 | + | 5.99 | AGGGGAGGGA
 |  | Fosl2 | -24 | -14 | + | 6.39 | GAGGGAGGGA
 |  | [NAME] | -60 | -50 | + | 7.08 | GGGGGAGGGA
 |  | [NAME] | -48 | -38 | + | 7.37 | GGGGCGGTGC
 |  | [NAME] | -38 | -28 | + | 6.98 | CGGGCGGGGC
 |  | Id1 | -50 | -40 | - | 6.82 | AACCCGCCCT
 |  | Klf10 | -63 | -53 | - | 7.66 | GCCCCGCCCT
 |  | Klf10 | -51 | -41 | - | 8.07 | ACCCCGCCCG
 |  | Klf10 | -35 | -25 | + | 7.22 | GGGGCAGGCA
 |  | Klf4 | -58 | -48 | + | 8.46 | GAGGCGGGGA
 |  | Lbh | -67 | -57 | + | 8.06 | GAGGCGGGGC
 |  | Lbh | -44 | -34 | - | 8.75 | GCCCCGCCCC
 |  | Lima1 | -41 | -31 | + | 8.75 | GGGGCGGGGC
 |  | Lima1 | -18 | -8 | + | 8.75 | GGGGCGGGGC
 |  | [NAME] | -80 | -70 | - | 8.75 | GCCCCGCCCC
 |  | Mab21l1 | -40 | -30 | - | 6.28 | GCCCTGCCTT
 |  | Marveld1 | -50 | -40 | + | 6.24 | GAGGGGTGGA
 |  | Met | -83 | -73 | + | 8.06 | AGGGCGGGGA
 |  | Met | -69 | -59 | - | 6.54 | AACCCCCCCC
 |  | Midn | -68 | -58 | - | 6.81 | TGCCCGCCCA
 |  | Msh6 | -76 | -66 | + | 6.98 | CGGGCGGGGC
 |  | Myadm | -19 | -9 | - | 7.09 | TCCCCACCCC
 |  | Myc | -52 | -42 | - | 8.06 | TCCCCGCCCA
 |  | Myo1c | -23 | -13 | - | 6.54 | TTCCTGCCCC
 |  | Nuak2 | -52 | -42 | + | 8.99 | GGGGCGTGGT
 |  | Osr1 | -66 | -56 | + | 5.99 | AGGGGAGGGA
 |  | Pdgfra | -63 | -53 | + | 7.77 | GGGGGGGGGA
 |  | Pdlim5 | -79 | -69 | + | 5.98 | GGGGCGTGAC
 |  | Pdlim5 | -59 | -49 | + | 7.9 | GGGGCGTGGC
 |  | Pdlim5 | -37 | -27 | + | 8.06 | GAGGCGGGGC
 |  | Pi15 | -61 | -51 | - | 6.81 | AGCCTGCCCT
 |  | Rrm2 | -22 | -12 | - | 7.9 | GCCACGCCCC
 |  | S100a4 | -50 | -40 | + | 6.97 | TGGGCAGGGC
 |  | Serpine1 | -70 | -60 | + | 6.14 | GGGGCTGGAA
 |  | Sertad4 | -34 | -24 | + | 6 | GAGGCGGAGC
 |  | Sertad4 | -17 | -7 | + | 7.37 | GAGGCAGGGC
 |  | [NAME] | -65 | -55 | - | 7.77 | TCCCCCCCCC
 |  | Smad7 | -34 | -24 | - | 6.14 | GCCACGCCGC
 |  | Snai1 | -64 | -54 | + | 5.98 | GGGGCGTGAC
 |  | Snai1 | -44 | -34 | - | 5.98 | GTCACGCCCC
 |  | Ston1 | -73 | -63 | - | 7.09 | TCCCCACCCC
 |  | Ston1 | -34 | -24 | - | 6.39 | TCCCTCCCTC
 |  | Ston1 | -18 | -8 | - | 5.99 | TCCCTCCCCT
 |  | Styk1 | -25 | -15 | - | 7.9 | GCCACGCCCC
 |  | Tgfb3 | -65 | -55 | - | 6.39 | TCCCTCCCTC
 |  | Thy1 | -76 | -66 | - | 7.78 | ACCCCACCCC
 |  | Trib1 | -36 | -26 | - | 6.57 | GCCCAGCCCA
 |  | Trib2 | -47 | -37 | + | 7.66 | AGGGCGGGGC
 |  | Trim16 | -17 | -7 | + | 6.57 | AGGGCTGGGC
 |  | Trim59 | -38 | -28 | + | 6.14 | GCGGCGCGGT
 |  | Zbtb37 | -53 | -43 | + | 6.69 | GGGGTGGGGC
 |  | Zcchc24 | -69 | -59 | - | 7.9 | TGCCCGCCCC
 |  | [NAME] | -84 | -74 | + | 7.09 | GAGGTGGGGT
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
4 | V$MZF1_01 | MZF1 | 9.18367372951 | 0.681250003166 | -238:-5 | 5.38142869498e-16
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 1110012J17Rik | -28 | -20 | + | 6.5 | GCTGGGGA
 |  | 1110012J17Rik | -18 | -10 | + | 6.59 | GAGGGGGA
 |  | 6330406I15Rik | -238 | -230 | - | 6.59 | TCCCCCTC
 |  | Fam64a | -136 | -128 | - | 7.09 | TCCCCTCC
 |  | Fam64a | -37 | -29 | + | 6.41 | CGCGGGGA
 |  | Angptl4 | -171 | -163 | - | 6.21 | TCCCCAAG
 |  | Arl4c | -159 | -151 | + | 7.18 | ATTGGGGA
 |  | Bcl2l1 | -224 | -216 | + | 7.88 | AGGGGGGA
 |  | Bhlhe40 | -91 | -83 | - | 7.09 | TCCCCTCC
 |  | Bhlhe40 | -77 | -69 | - | 7.6 | TCCCCCCC
 |  | Bnc1 | -202 | -194 | - | 7.5 | TCCCCACA
 |  | Bnc1 | -56 | -48 | + | 6.41 | CGCGGGGA
 |  | Capn2 | -216 | -208 | - | 7.18 | TCCCCAAT
 |  | Capn2 | -186 | -178 | - | 6.89 | [NAME]
 |  | Capn2 | -166 | -158 | - | 6.91 | TCCCCCCA
 |  | Capn2 | -141 | -133 | - | 8.18 | TCCCCACC
 |  | Ccnd1 | -225 | -217 | - | 6.88 | TCCCCCTT
 |  | Ccnd1 | -156 | -148 | + | 6.59 | GAGGGGGA
 |  | Ccnd1 | -68 | -60 | - | 6.59 | TCCCCCTC
 |  | Cdc42ep2 | -76 | -68 | + | 6.41 | TGCGGGGA
 |  | Col12a1 | -229 | -221 | + | 6.37 | AAAGGGGA
 |  | Col12a1 | -188 | -180 | - | 8.47 | TCCCCACT
 |  | Col12a1 | -48 | -40 | - | 6.59 | TCCCCCTC
 |  | Col12a1 | -27 | -19 | - | 7.09 | TCCCCGCC
 |  | Col1a2 | -160 | -152 | + | 7.18 | GATGGGGA
 |  | Col1a2 | -135 | -127 | + | 7.09 | GGAGGGGA
 |  | Dusp5 | -59 | -51 | + | 7.09 | GGCGGGGA
 |  | Dusp6 | -80 | -72 | - | 7.5 | TCCCCACG
 |  | E2f8 | -191 | -183 | - | 6.21 | TCCCCAAG
 |  | E2f8 | -77 | -69 | + | 6.31 | GTGGGGGA
 |  | Egr2 | -114 | -106 | - | 7.46 | TCCCCATT
 |  | Egr2 | -87 | -79 | - | 6.59 | TCCCCCTC
 |  | Egr3 | -183 | -175 | - | 7.09 | TCCCCTCC
 |  | Egr3 | -161 | -153 | - | 6.37 | TCCCCTTT
 |  | Egr3 | -149 | -141 | - | 7.88 | TCCCCCCT
 |  | Ehd2 | -197 | -189 | - | 7.09 | TCCCCGCC
 |  | Enpp1 | -105 | -97 | + | 6.91 | CGGGGGGA
 |  | Enpp1 | -64 | -56 | + | 7.09 | GGCGGGGA
 |  | Ets1 | -156 | -148 | - | 6.37 | TCCCCTTT
 |  | F2r | -160 | -152 | + | 6.78 | ACTGGGGA
 |  | Fez1 | -174 | -166 | - | 6.88 | TCCCCCTT
 |  | Fez1 | -9 | -1 | + | 7.38 | AGAGGGGA
 |  | Fhdc1 | -153 | -145 | + | 6.88 | AAGGGGGA
 |  | Flnc | -214 | -206 | - | 7.46 | TCCCCATT
 |  | Flnc | -125 | -117 | + | 6.49 | CATGGGGA
 |  | Flnc | -91 | -83 | - | 7.38 | TCCCCGCT
 |  | Grb14 | -162 | -154 | + | 7.09 | GGAGGGGA
 |  | [NAME] | -62 | -54 | + | 6.59 | GAGGGGGA
 |  | Id3 | -209 | -201 | - | 6.59 | TCCCCCTC
 |  | Id3 | -147 | -139 | + | 7.18 | ATTGGGGA
 |  | Id3 | -20 | -12 | + | 6.91 | TGGGGGGA
 |  | Igfbp6 | -235 | -227 | - | 6.31 | TCCCCCAC
 |  | Igfbp6 | -139 | -131 | - | 6.37 | TCCCCTTT
 |  | Klf4 | -122 | -114 | + | 7.09 | GGCGGGGA
 |  | Klf4 | -56 | -48 | + | 7.09 | GGCGGGGA
 |  | Klhdc8a | -164 | -156 | - | 6.91 | TCCCCCCA
 |  | Lamb1 | -198 | -190 | - | 6.5 | [NAME]
 |  | Lbh | -213 | -205 | + | 8.18 | GGTGGGGA
 |  | Lbh | -147 | -139 | - | 7.09 | TCCCCGCC
 |  | [NAME] | -60 | -52 | - | 7.38 | TCCCCGCT
 |  | Lima1 | -206 | -198 | + | 6.37 | AAAGGGGA
 |  | [NAME] | -15 | -7 | - | 7.38 | TCCCCTCT
 |  | [NAME] | -6 | 2 | - | 6.41 | TCCCCGCA
 |  | Mab21l1 | -120 | -112 | + | 7.88 | AGGGGGGA
 |  | Met | -195 | -187 | + | 6.5 | GCTGGGGA
 |  | Met | -81 | -73 | + | 7.09 | GGCGGGGA
 |  | Met | -32 | -24 | - | 7.18 | TCCCCATC
 |  | Met | -5 | 3 | + | 6.89 | GTTGGGGA
 |  | Midn | -228 | -220 | + | 6.49 | CATGGGGA
 |  | Myadm | -19 | -11 | - | 8.18 | TCCCCACC
 |  | Myc | -161 | -153 | - | 8.47 | TCCCCACT
 |  | Myc | -124 | -116 | + | 7.09 | GGCGGGGA
 |  | Myc | -87 | -79 | + | 8.18 | GGTGGGGA
 |  | Myc | -52 | -44 | - | 7.09 | TCCCCGCC
 |  | Nrp1 | -197 | -189 | + | 7.88 | AGGGGGGA
 |  | Nrp1 | -108 | -100 | + | 6.41 | TGCGGGGA
 |  | Nrp1 | -64 | -56 | + | 6.59 | GAGGGGGA
 |  | Nuak2 | -34 | -26 | - | 6.59 | TCCCCCTC
 |  | Nudt4 | -105 | -97 | - | 8.18 | TCCCCACC
 |  | Osr1 | -182 | -174 | + | 7.09 | GGAGGGGA
 |  | Osr1 | -59 | -51 | + | 7.09 | GGAGGGGA
 |  | Pdgfra | -210 | -202 | - | 7.88 | TCCCCCCT
 |  | Pdgfra | -61 | -53 | + | 7.6 | GGGGGGGA
 |  | Pdlim5 | -9 | -1 | - | 8.18 | TCCCCACC
 |  | Ptgfr | -154 | -146 | - | 6.49 | TCCCCATA
 |  | Rhoj | -93 | -85 | - | 7.38 | TCCCCTCT
 |  | Rrm2 | -185 | -177 | - | 6.21 | TCCCCAAG
 |  | S100a4 | -165 | -157 | + | 6.5 | GCTGGGGA
 |  | S100a4 | -66 | -58 | - | 6.59 | TCCCCCAT
 |  | S100a4 | -5 | 3 | - | 6.21 | TCCCCAAA
 |  | S100a6 | -127 | -119 | - | 7.09 | TCCCCTCC
 |  | S100a6 | -115 | -107 | + | 6.21 | CTTGGGGA
 |  | S100a6 | -67 | -59 | - | 6.59 | TCCCCCTC
 |  | Sdpr | -130 | -122 | + | 6.5 | GCTGGGGA
 |  | Serpine1 | -193 | -185 | - | 6.59 | TCCCCCAT
 |  | Serpine1 | -131 | -123 | + | 6.59 | GAGGGGGA
 |  | Six1 | -148 | -140 | - | 7.5 | TCCCCACG
 |  | Six1 | -19 | -11 | + | 6.41 | TGCGGGGA
 |  | [NAME] | -234 | -226 | - | 7.6 | TCCCCCCC
 |  | [NAME] | -226 | -218 | - | 7.6 | TCCCCCCC
 |  | [NAME] | -175 | -167 | - | 7.09 | TCCCCTCC
 |  | [NAME] | -65 | -57 | - | 7.6 | TCCCCCCC
 |  | Smad7 | -225 | -217 | + | 7.88 | AGGGGGGA
 |  | Socs5 | -115 | -107 | + | 6.91 | CGGGGGGA
 |  | Socs5 | -93 | -85 | + | 6.59 | GAGGGGGA
 |  | Sox9 | -222 | -214 | - | 6.41 | TCCCCTCA
 |  | Sox9 | -188 | -180 | - | 7.09 | TCCCCTCC
 |  | Sox9 | -173 | -165 | - | 7.09 | TCCCCTCC
 |  | Sox9 | -134 | -126 | - | 6.5 | [NAME]
 |  | Spry2 | -21 | -13 | + | 7.88 | AGGGGGGA
 |  | Ston1 | -183 | -175 | + | 6.21 | TTTGGGGA
 |  | Ston1 | -123 | -115 | + | 7.09 | GGCGGGGA
 |  | Ston1 | -86 | -78 | - | 6.31 | TCCCCCAC
 |  | Ston1 | -73 | -65 | - | 8.18 | TCCCCACC
 |  | Ston1 | -43 | -35 | - | 6.88 | TCCCCCTT
 |  | Ston1 | -26 | -18 | - | 7.38 | TCCCCTCT
 |  | Ston1 | -5 | 3 | - | 7.38 | TCCCCTCT
 |  | Tgfb3 | -199 | -191 | + | 7.09 | GGAGGGGA
 |  | Tgfb3 | -53 | -45 | - | 6.31 | TCCCCCAC
 |  | Thy1 | -13 | -5 | - | 7.88 | TCCCCCCT
 |  | Trim16 | -238 | -230 | + | 6.09 | GAAGGGGA
 |  | Trim16 | -227 | -219 | + | 7.09 | GGAGGGGA
 |  | Trim59 | -190 | -182 | - | 7.09 | TCCCCGCC
 |  | Trim59 | -157 | -149 | - | 7.6 | TCCCCCCC
 |  | Zbtb37 | -86 | -78 | + | 6.41 | TGAGGGGA
 |  | [NAME] | -39 | -31 | + | 6.5 | GCTGGGGA
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
5 | V$MZF1_02 | MZF1 | 9.77485069483 | 0.576923076923 | - 167 : 11 | 3.11160130259e-12
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 1110012J17Rik | -22 | -9 | + | 7.1 | GACGGAGGGGGAC
 |  | Fam64a | -159 | -146 | + | 6.22 | TGGAGAGGGTGAT
 |  | Angptl4 | -23 | -10 | - | 6.5 | CTCTCCCTCCCAC
 |  | Anxa3 | -159 | -146 | + | 5.96 | GGGGGATGGGCGG
 |  | Anxa3 | -79 | -66 | + | 6.06 | ATGTGAGGGAGAC
 |  | Anxa3 | -66 | -53 | + | 5.89 | AGGGGAAGGGGAG
 |  | Anxa3 | -50 | -37 | + | 7.58 | TTGCGAGGGGGGC
 |  | Arl4c | -8 | 5 | + | 6.66 | GGGCGAGGGGCGT
 |  | Bhlhe40 | -78 | -65 | - | 8.13 | CTCCCCCCCCCCC
 |  | Bnc1 | -160 | -147 | + | 6.54 | GGAGTAGGGGCGC
 |  | Bnc1 | -94 | -81 | + | 5.81 | GCACGAGGGGCGC
 |  | Capn2 | -167 | -154 | - | 7.86 | GTCCCCCCAACAC
 |  | Capn2 | -12 | 1 | + | 6.83 | TGGGGAGGCGGAG
 |  | Ccnd1 | -160 | -147 | + | 9.53 | [NAME]
 |  | Ccnd1 | -137 | -124 | - | 9.16 | TTGCCCCCCCCCC
 |  | Ccnd1 | -123 | -110 | - | 5.88 | CCGCCCCCCCCCC
 |  | Ccnd1 | -69 | -56 | - | 9.58 | CTCCCCCTCCCCC
 |  | Clcf1 | -56 | -43 | - | 6 | CACCCCCCCCCTC
 |  | Clcf1 | -37 | -24 | + | 6.5 | GTGGGAGGGAGAG
 |  | Clcf1 | -4 | 9 | - | 6.88 | TCCCTCCTCCCCC
 |  | Clcf1 | 11 | 24 | - | 7.69 | CTTCCCCCCACCC
 |  | Col12a1 | -131 | -118 | + | 6.51 | GGGTTAGGGAAAC
 |  | Col12a1 | -49 | -36 | - | 8.46 | GTCCCCCTCTCTC
 |  | E2f8 | -75 | -62 | + | 7.05 | GGGGGAGGGGAGG
 |  | Egr2 | -35 | -22 | + | 6.66 | GGGAGAGGGGCGG
 |  | Egr3 | -149 | -136 | - | 8.65 | TCCCCCCTCCCTC
 |  | Ehbp1l1 | -158 | -145 | - | 8.02 | GTCACCCTAACCC
 |  | Ehbp1l1 | 10 | 23 | + | 7.89 | GGGCGAGGGGGGG
 |  | F2r | -158 | -145 | + | 6.18 | TGGGGAGGAGCGA
 |  | F2r | -114 | -101 | + | 6.9 | GAGCGAGGGGCTG
 |  | Fez1 | -58 | -45 | + | 6.06 | TGGGGGGTGGAAA
 |  | Fez1 | -7 | 6 | + | 7.67 | AGGGGAGGGGGAT
 |  | Fhdc1 | -158 | -145 | + | 6.47 | GGTTGAAGGGGGA
 |  | Flnc | -105 | -92 | - | 5.77 | GCGCCCCCACCCC
 |  | Flnc | -66 | -53 | + | 6.65 | GGAGGAGGGGCGG
 |  | Grb14 | -99 | -86 | + | 6.06 | TAGAGAGGAGAAA
 |  | [NAME] | -66 | -53 | + | 8.34 | GCGGGAGGGGGAG
 |  | Id1 | -163 | -150 | - | 6.08 | GCCCCCATCACCT
 |  | Id3 | -24 | -11 | + | 6.78 | GTATTGGGGGGAG
 |  | Igfbp6 | -133 | -120 | - | 6.34 | TTACTCCTCCCTA
 |  | Il1rap | 11 | 24 | + | 7.74 | TCCGGAGGGGGAA
 |  | Klf10 | -10 | 3 | + | 6.38 | CGGGGAGGGGGGC
 |  | Klhdc8a | -165 | -152 | - | 6.89 | CTCCCCCCAAACA
 |  | Klhdc8a | -95 | -82 | - | 6.14 | CTCCGCCTCCTCA
 |  | Lamb1 | -50 | -37 | - | 5.99 | CCACCCCTAGCCA
 |  | [NAME] | 8 | 21 | - | 7.18 | TCGCCCCTAGTAC
 |  | [NAME] | -45 | -32 | - | 5.97 | CCACCCCTCCTCC
 |  | Marveld1 | -106 | -93 | + | 6.22 | GAAAGGGGGGGTA
 |  | Marveld1 | 1 | 14 | + | 7.12 | GAGAGAGGGAGAA
 |  | Met | -69 | -56 | - | 6.16 | AACCCCCCCCCCC
 |  | Midn | -117 | -104 | + | 6.56 | GGGTGGGGGGGTT
 |  | Myadm | -38 | -25 | - | 5.97 | CTACCCATCCCTA
 |  | Myadm | -20 | -7 | - | 8.19 | TTCCCCACCCCCA
 |  | Myc | -161 | -148 | - | 6.31 | TCCCCACTAGCCC
 |  | Myc | -115 | -102 | + | 6.65 | GCGAGAGGAGGAA
 |  | Myc | -91 | -78 | + | 6.82 | GAGAGGTGGGGAA
 |  | Myo1c | -35 | -22 | - | 5.81 | CAGCCCCTCCTCT
 |  | Nrp1 | -68 | -55 | + | 8.74 | GAGGGAGGGGGAG
 |  | Nuak2 | -119 | -106 | + | 7.4 | AGGAGAGGGTGAA
 |  | Nuak2 | -35 | -22 | - | 9.49 | TTCCCCCTCGAAA
 |  | Nudt4 | 1 | 14 | + | 5.84 | GGGCGAAGGGGGC
 |  | Osr1 | -77 | -64 | + | 5.76 | AGTTGGGGGGCAG
 |  | Osr1 | -62 | -49 | + | 7.81 | GAGGGAGGGGAGA
 |  | Osr1 | -37 | -24 | + | 5.98 | AGGGGAGGGGGGT
 |  | Oxct1 | 11 | 24 | + | 7.5 | GCGCGAGGGGAAG
 |  | Pdgfra | -66 | -53 | + | 6.79 | AGGGGGGGGGGGA
 |  | Pi15 | -101 | -88 | - | 5.82 | [NAME]
 |  | Ptgfr | -155 | -142 | - | 6.41 | TTCCCCATAAGCT
 |  | Rhoj | -95 | -82 | - | 7.74 | TTTCCCCTCTCCG
 |  | S100a4 | -66 | -53 | - | 6.18 | TCCCCCATCCTCT
 |  | S100a6 | -129 | -116 | - | 7.9 | CTTCCCCTCCCTC
 |  | S100a6 | -68 | -55 | - | 9.83 | GTCCCCCTCACAC
 |  | Serpine1 | -135 | -122 | + | 8.74 | GAGGGAGGGGGAG
 |  | [NAME] | -74 | -61 | - | 6.79 | TCGCCCCCCTCCC
 |  | [NAME] | -61 | -48 | - | 6.44 | CCCCCCCCCCCCC
 |  | Socs5 | -166 | -153 | - | 6.28 | CCGCCCCCCACCC
 |  | Socs5 | -127 | -114 | + | 6.33 | GGGCTGGGGGGGC
 |  | Socs5 | -113 | -100 | + | 8.65 | GGGGGAGGGGAGA
 |  | Socs5 | -97 | -84 | + | 8.74 | TGACGAGGGGGAG
 |  | Socs5 | -73 | -60 | + | 5.77 | GGGGTGGGGGCTG
 |  | Spry2 | -24 | -11 | + | 6.27 | AGAAGGGGGGAAA
 |  | Ston1 | -86 | -73 | - | 6.5 | TCCCCCACCCCCA
 |  | Ston1 | -43 | -30 | - | 6.36 | TCCCCCTTCTCCC
 |  | Ston1 | -15 | -2 | - | 6.45 | CTCCCCTTCCTCC
 |  | Thy1 | -72 | -59 | - | 6.48 | CACCCCCTCCATC
 |  | Thy1 | -58 | -45 | - | 6.16 | TTTTCCCTCAGCC
 |  | Thy1 | -13 | 0 | - | 7.96 | TCCCCCCTCTCTC
 |  | Trib1 | -146 | -133 | - | 6.1 | CCGCCCCTCCCGC
 |  | Trim59 | -158 | -145 | - | 6 | TTCCCCCCCAAGG
 |  | Zbtb37 | -42 | -29 | + | 8.53 | GGGTGAGGGTGAC
 |  | [NAME] | -86 | -73 | + | 6.37 | GGGAGGTGGGGTA
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
6 | V$NGFIC_01 | NGFI-C | 17.4047747502 | 0.692772606229 | -101:-2 | 1.45179864949e-10
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 1110012J17Rik | -75 | -63 | - | 5.31 | CCGCCCCCTCCC
 |  | 1110012J17Rik | -43 | -31 | + | 3.42 | GGGCGTGCGCGT
 |  | Angptl4 | -18 | -6 | - | 5.79 | CCTCCCACTCCC
 |  | Anxa3 | -50 | -38 | + | 2.55 | TTGCGAGGGGGG
 |  | Arl4c | -101 | -89 | + | 2.41 | TCGCCTGGGCGA
 |  | Bhlhe40 | -73 | -61 | - | 2.65 | CCCCCCCCGCCC
 |  | Bnc1 | -47 | -35 | - | 5.33 | CCGCCCACTTCT
 |  | Bnc1 | -23 | -11 | + | 7.57 | GGGCGGGGGTGG
 |  | Ccnd1 | -70 | -58 | - | 3.54 | CCTCCCCCTCCC
 |  | Col12a1 | -97 | -85 | + | 6.13 | [NAME]
 |  | Dusp5 | -10 | 2 | - | 4.56 | ACGCGCACTCAT
 |  | Egr2 | -41 | -29 | + | 3.14 | GCGCGGGGGAGA
 |  | Egr2 | -8 | 4 | - | 6.79 | CCGCCCACGTGC
 |  | Egr3 | -54 | -42 | + | 3.95 | AGGCGGCGGCGG
 |  | Egr3 | -39 | -27 | + | 3.59 | TGGCGGCGGCGG
 |  | Ehbp1l1 | -91 | -79 | - | 3.9 | CCACCCCCGAAC
 |  | Elk3 | -31 | -19 | + | 2.72 | GCGCGGGGGCGC
 |  | Enpp1 | -30 | -18 | - | 6.83 | ACGCCCACGTCA
 |  | Fhl3 | -99 | -87 | + | 6.9 | AGGAGGGGGCGG
 |  | Filip1l | -90 | -78 | - | 5.33 | ACACCCTCGCAC
 |  | Flnc | -55 | -43 | + | 6.94 | GGGCGGAGGCGG
 |  | Fosl2 | -81 | -69 | + | 8.36 | GCGCGGGGGCGG
 |  | [NAME] | -64 | -52 | + | 3.54 | GGGAGGGGGAGG
 |  | Il1rap | -50 | -38 | + | 6.34 | CCGCGTGGGTGG
 |  | Il1rap | -10 | 2 | + | 2.64 | GCGCGGTGGCGG
 |  | Klf4 | -63 | -51 | + | 4.17 | GGGAGGAGGCGG
 |  | Klhdc8a | -93 | -81 | - | 6.48 | CCGCCTCCTCAC
 |  | Lamb1 | -16 | -4 | - | 8.36 | CCGCCCCCGCTC
 |  | Lbh | -82 | -70 | + | 6 | AAGAGTGGGCGA
 |  | [NAME] | -11 | 1 | - | 7.89 | CCTCCCCCGCCT
 |  | [NAME] | -77 | -65 | - | 4.25 | CCGCCCCCGTCC
 |  | Marveld1 | -15 | -3 | + | 4.93 | GCGAGTAGGAGG
 |  | Msh6 | -98 | -86 | - | 3.93 | CCATCTACGCCA
 |  | Myadm | -42 | -30 | - | 3.72 | TCGCCTACCCAT
 |  | Myadm | -16 | -4 | - | 3.51 | CCACCCCCACTT
 |  | Myc | -49 | -37 | - | 4.68 | CCGCCCACCCGC
 |  | Nrp1 | -66 | -54 | + | 3.54 | GGGAGGGGGAGG
 |  | Nuak2 | -57 | -45 | + | 3.05 | ACGCAGGGGCGT
 |  | Osr1 | -5 | 7 | + | 6.5 | ATAAGTAGGCGG
 |  | Pdlim5 | -25 | -13 | + | 7.22 | GCGCGGAGGCGG
 |  | Phldb2 | -26 | -14 | + | 3.07 | TTGAGTAGGCCT
 |  | Serpine1 | -80 | -68 | + | 3.52 | GAAAGTGGGTGG
 |  | Sertad4 | -39 | -27 | + | 6.94 | GGGCGGAGGCGG
 |  | Socs5 | -95 | -83 | + | 5.41 | ACGAGGGGGAGG
 |  | Thy1 | -73 | -61 | - | 6.04 | CCACCCCCTCCA
 |  | Trib1 | -94 | -82 | - | 5.31 | CCGCCCCCTCCC
 |  | Trib2 | -57 | -45 | + | 3.83 | GGGCGTGGGTAG
 |  | Trim59 | -64 | -52 | - | 4.72 | CCGCCCGCGCTC
 |  | Trim59 | -46 | -34 | + | 8.17 | TGGCGGAGGCGG
 |  | Trim59 | -2 | 10 | - | 4.31 | CCGCCCCCGCCG
 |  | [NAME] | -80 | -68 | + | 3.98 | TGGGGTAGGTGG
 |  | [NAME] | -16 | -4 | + | 4.31 | CGGCGGGGGCGG
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
7 | V$AP2_Q6 | AP-2 | 10.3435600158 | 0.794871796209 | -144:-22 | 6.06279208859e-10
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 1110012J17Rik | -30 | -18 | - | 6.51 | GGGCTGGGGACG
 |  | Angptl4 | -47 | -35 | + | 9.41 | CGCCCCCGGGCC
 |  | Bhlhe40 | -122 | -110 | + | 6.91 | AGCCCGCAGCCT
 |  | Bnc1 | -124 | -112 | + | 8.04 | GACCCCGGGGCG
 |  | Bnc1 | -66 | -54 | + | 7.92 | CACCCGGCGCCG
 |  | Capn2 | -32 | -20 | + | 8.21 | AGCCCGGCGCCG
 |  | Ccnd1 | -122 | -110 | + | 6.15 | CGCCCCCCCCCC
 |  | Clcf1 | -106 | -94 | + | 9.18 | CTCCCCCAGGAG
 |  | Col12a1 | -64 | -52 | + | 6.74 | AACCCGGCTGCG
 |  | Col12a1 | -23 | -11 | + | 6.73 | CGCCCCCGGAGG
 |  | Dlx2 | -129 | -117 | + | 6.06 | GGTCCCGGGGCC
 |  | Dlx2 | -104 | -92 | + | 7.23 | CTCCCGGCGCCC
 |  | Dusp5 | -67 | -55 | - | 7.26 | AGCCAGGGGGCG
 |  | Dusp6 | -81 | -69 | + | 6.38 | GTCCCCACGGCA
 |  | E2f8 | -101 | -89 | - | 6.44 | GGGCCCCGGGCC
 |  | E2f8 | -80 | -68 | - | 7.02 | GGCGTGGGGGAG
 |  | E2f8 | -57 | -45 | + | 9.48 | CGCCCGCGGGAG
 |  | Egr2 | -85 | -73 | - | 7.53 | CCCCTCGGGGCG
 |  | Ehbp1l1 | -31 | -19 | + | 6.15 | CGCCCCGCCCCG
 |  | Elk3 | -91 | -79 | - | 8.72 | GGCCGGCGGGTC
 |  | Elk3 | -32 | -20 | - | 7.14 | GGCGCGGGGGCG
 |  | Enpp1 | -107 | -95 | - | 5.84 | CGCGGGGGGATT
 |  | F2r | -55 | -43 | + | 7.05 | CGCCCCACGCCC
 |  | F2r | -23 | -11 | + | 6.84 | CACCCAGGGGCC
 |  | Fhdc1 | -99 | -87 | - | 6.32 | CGGCTGGAGGAG
 |  | Fhl3 | -106 | -94 | - | 5.94 | CGCAGGCAGGAG
 |  | Fhl3 | -80 | -68 | - | 6.41 | CCCTTGCGGGCG
 |  | Fhl3 | -61 | -49 | + | 8.91 | GGCCCGGGGGCG
 |  | Flnc | -104 | -92 | + | 5.93 | CGCCCCCACCCC
 |  | Flnc | -43 | -31 | - | 8.14 | GGCCGTGGGGCT
 |  | Flnc | -25 | -13 | + | 6.22 | GGCCCCCACCCG
 |  | Fosl2 | -112 | -100 | - | 6.05 | AGCCCGTGGGTC
 |  | Fosl2 | -82 | -70 | - | 8.11 | CGCGCGGGGGCG
 |  | H1f0 | -135 | -123 | + | 6.11 | [NAME]
 |  | [NAME] | -144 | -132 | - | 8.5 | CGCCTCCGGGTC
 |  | [NAME] | -93 | -81 | + | 6.72 | CGCCTCCAGCCG
 |  | [NAME] | -44 | -32 | - | 6.34 | CGGTGCCGGGCG
 |  | Id1 | -110 | -98 | + | 7.42 | GACCCAGAGGCG
 |  | Il1rap | -133 | -121 | + | 7.06 | CTCCTCGCGGCG
 |  | Klf10 | -47 | -35 | + | 5.93 | CGCCCGCGGCGC
 |  | Klf4 | -95 | -83 | + | 6.96 | GGCCTGGCGGCG
 |  | Klhdc8a | -57 | -45 | + | 6.35 | CGCCCCCACGCT
 |  | Lbh | -137 | -125 | + | 9.48 | CGCCCGCGGGAG
 |  | [NAME] | -119 | -107 | - | 7.87 | CTGCTGCGGGAG
 |  | Lima1 | -112 | -100 | - | 9.7 | CGCCGCCGGGAG
 |  | Lima1 | -74 | -62 | - | 5.93 | GGGAGGCGGGAG
 |  | Lima1 | -47 | -35 | - | 7.82 | CGGCAGGGGGCG
 |  | Mab21l1 | -72 | -60 | + | 7.03 | AGCCCAGTGGCG
 |  | Mab21l1 | -54 | -42 | + | 7.83 | CGCCCGCCTGCC
 |  | Met | -115 | -103 | + | 6.37 | GACCCCCCGGGC
 |  | Midn | -137 | -125 | - | 6.06 | GGCCAGCAGGCG
 |  | Midn | -82 | -70 | + | 7.74 | GGCCCCCCGCCC
 |  | Msh6 | -128 | -116 | - | 5.94 | AGCTTGGGGGCT
 |  | Msh6 | -111 | -99 | + | 6.15 | CGCCCCGCCCCG
 |  | Msh6 | -43 | -31 | - | 6.7 | CGCCTTCGGATT
 |  | Msh6 | -31 | -19 | - | 7.64 | [NAME]
 |  | Myc | -48 | -36 | + | 6.74 | CGCCCACCCGCC
 |  | Myo1c | -116 | -104 | + | 6.04 | GACCCGGAGCCC
 |  | Nrp1 | -77 | -65 | - | 5.92 | GGGCTCTGGGAG
 |  | Nudt4 | -138 | -126 | + | 8.84 | CGCCCCCCGGCT
 |  | Nudt4 | -90 | -78 | + | 6.34 | CGCCCGGCAACG
 |  | Nudt4 | -53 | -41 | + | 7.3 | CGCCCAAAGGAG
 |  | Nudt4 | -25 | -13 | - | 7.89 | CGCGCGCGGGAG
 |  | Pdlim5 | -48 | -36 | - | 7.25 | AGCCTTGGGGCG
 |  | Rrm2 | -142 | -130 | + | 5.83 | CGCCCGCGCACC
 |  | Sertad4 | -100 | -88 | + | 8.11 | CTCCCGCGGGCT
 |  | Sertad4 | -73 | -61 | - | 8.39 | GGGCTGCGGGCG
 |  | Sertad4 | -47 | -35 | + | 5.87 | GGCCCCGAGGGC
 |  | Six1 | -22 | -10 | - | 7.24 | CGCTGCGGGGAG
 |  | [NAME] | -138 | -126 | + | 6.21 | CGCCCAGAGCAG
 |  | [NAME] | -73 | -61 | + | 6.15 | CGCCCCCCTCCC
 |  | [NAME] | -24 | -12 | + | 7.99 | AACCCGCGGCCG
 |  | Snai1 | -40 | -28 | + | 8.21 | CGCCCCCAGCCC
 |  | Socs5 | -134 | -122 | - | 6.73 | CGGTGGGGGGCT
 |  | Socs5 | -118 | -106 | - | 8.02 | GGGCGGGGGGAG
 |  | Socs5 | -37 | -25 | + | 5.96 | GGTCCCCGGGCT
 |  | Ston1 | -143 | -131 | + | 6.9 | ATCCCGCAGGAA
 |  | Tgfb3 | -48 | -36 | + | 6.83 | CACCCCAGGCCG
 |  | Trib1 | -73 | -61 | + | 8.91 | GGCCCGCGGGCC
 |  | Trib1 | -26 | -14 | - | 6.67 | ACCCGGGGGGCG
 |  | Trib2 | -139 | -127 | - | 11.07 | CGCCGGCGGGCG
 |  | Trib2 | -84 | -72 | - | 7.01 | GGGCTCCGGGCT
 |  | Trim16 | -92 | -80 | + | 6.62 | [NAME]
 |  | Zcchc24 | -60 | -48 | - | 8.61 | CTCCGCCGGGAG
 |  | Zcchc24 | -43 | -31 | - | 7.22 | CGCGAGCGGGCG
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
8 | V$TATA_01 | TATA | 10.0863285279 | 0.376692369239 | - 43 : 5 | 4.08704140682e-08
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 2310014H01Rik | -9 | 6 | + | 6.93 | GTATAAATCAGGGAA
 |  | Angptl4 | -4 | 11 | - | 7.39 | ACCCGCTTTATAAAG
 |  | Col1a2 | -30 | -15 | + | 6.22 | TCATAAATAGGCAGC
 |  | Dusp5 | -41 | -26 | - | 6.73 | TTTGGCCTTATATGG
 |  | Dusp5 | 4 | 19 | + | 6 | ACATAAAACGCTGCG
 |  | Emp1 | -9 | 6 | + | 6.64 | CTTTAAAACACGGGG
 |  | Grb14 | -6 | 9 | - | 6.5 | ACTCTGTTTTTATTC
 |  | Id1 | -30 | -15 | + | 7.45 | TTATAAAAGACTGGC
 |  | Lbh | -37 | -22 | - | 6.64 | CCCTCCCTTATAAAT
 |  | Mab21l1 | -40 | -25 | - | 7.04 | GCCCTGCCTTTATAA
 |  | Myc | -43 | -28 | - | 8.02 | ACCCGCCCTTTATAT
 |  | Nuak2 | -27 | -12 | - | 6.48 | CGAAACGTTTTATAG
 |  | Nudt4 | -14 | 1 | - | 5.52 | GCCCCGCTTAAATGC
 |  | Pi15 | -30 | -15 | + | 6.72 | ATATAAAAGCTGTTA
 |  | Rrm2 | 5 | 20 | - | 6.22 | GGTGGCTCTTTAAAG
 |  | S100a4 | -37 | -22 | - | 6.14 | GCAGGGTATAAATAG
 |  | Serpine1 | -29 | -14 | + | 8.18 | GTATAAAGGGAGGCA
 |  | Tgfb3 | -18 | -3 | + | 6.23 | GTATAAAATTTCAGC
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
9 | V$GKLF_01 | GKLF | 8.76683454265 | 0.49271137982 | -72:-11 | 2.92088733963e-07
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 2310014H01Rik | -60 | -46 | - | 6.22 | CCCATCTCTCAGTC
 |  | Bhlhe40 | -40 | -26 | - | 7.37 | CCCCCCCTTCCCTC
 |  | Bhlhe40 | -11 | 3 | - | 6.67 | CCCCACTTCTCATT
 |  | Bnc1 | -44 | -30 | - | 5.75 | CCCACTTCTCCTGC
 |  | Ccnd1 | -71 | -57 | - | 6.17 | CCCTCCCCCTCCCC
 |  | Clcf1 | -54 | -40 | - | 5.92 | CCCCCCCCCTCAGT
 |  | Clcf1 | -37 | -23 | + | 6.04 | GTGGGAGGGAGAGG
 |  | Clcf1 | -12 | 2 | - | 7.76 | CCCTCCCTTCCCTC
 |  | Col12a1 | -47 | -33 | - | 6.77 | CCCCCTCTCTCCCT
 |  | Col12a1 | -33 | -19 | - | 5.74 | CCCTCCTCCCCGCC
 |  | Egr2 | -39 | -25 | + | 5.8 | GCGGGGGAGAGGGG
 |  | Ehbp1l1 | -11 | 3 | - | 5.73 | CCCCGCCCGCCTTC
 |  | Emp1 | -53 | -39 | - | 5.66 | CCAAGTTTTTTTTT
 |  | Fez1 | -50 | -36 | + | 7.23 | GGAAAGGAAGAAGG
 |  | Fez1 | -16 | -2 | + | 6.21 | CTGAGAAAGAGGGG
 |  | Flnc | -70 | -56 | + | 5.62 | GCGTGGAGGAGGGG
 |  | [NAME] | -65 | -51 | + | 5.69 | CGGGAGGGGGAGGG
 |  | Id3 | -22 | -8 | + | 6.34 | ATTGGGGGGAGGGG
 |  | Igfbp6 | -17 | -3 | + | 5.98 | GGCGGAGAAGAAGG
 |  | Klf10 | -12 | 2 | + | 6.01 | CACGGGGAGGGGGG
 |  | Lbh | -72 | -58 | + | 6.35 | GAGGAGAGGCGGGG
 |  | Lbh | -43 | -29 | - | 5.61 | CCCCGCCCCTCCCT
 |  | [NAME] | -46 | -32 | - | 6.15 | [NAME]
 |  | [NAME] | -18 | -4 | - | 7.45 | CCCTCCCCTCTCTC
 |  | Marveld1 | -20 | -6 | + | 6.24 | AAAGAGCGAGTAGG
 |  | Myadm | -30 | -16 | - | 5.75 | CCCTACCTTGTTCC
 |  | Myc | -46 | -32 | - | 6.17 | CCCACCCGCCCTTT
 |  | Myo1c | -32 | -18 | - | 7.61 | CCCCTCCTCTTCCT
 |  | Nrp1 | -72 | -58 | + | 5.91 | CTGGGAGGGAGGGG
 |  | Nrp1 | -55 | -41 | + | 6.04 | GTCGGAGAGAGAGG
 |  | Nrp1 | -12 | 2 | - | 5.66 | CCCGCTCATCTTTT
 |  | Osr1 | -68 | -54 | + | 6.02 | GCAGGGGAGGGAGG
 |  | Osr1 | -41 | -27 | + | 6.63 | GGCAAGGGGAGGGG
 |  | Pdgfra | -70 | -56 | + | 6.07 | [NAME]
 |  | Pdlim5 | -69 | -55 | + | 6.63 | CATTAGGGGAGGGG
 |  | Pi15 | -55 | -41 | - | 5.71 | CCCTTTCTGGACTT
 |  | Rrm2 | -35 | -21 | + | 6.11 | AATGGGAGGCGAGG
 |  | Sdpr | -57 | -43 | - | 7.05 | ACTTTTTTTTTTTT
 |  | [NAME] | -69 | -55 | - | 6.2 | CCCCTCCCCCCCCC
 |  | Spry2 | -45 | -31 | + | 7.05 | AAAAAAAAAAAAAG
 |  | Spry2 | -31 | -17 | + | 8.3 | GAGAGAGAGAAGGG
 |  | Ston1 | -49 | -35 | - | 7.56 | CCCTCCTCCCCCTT
 |  | Ston1 | -33 | -19 | - | 7.17 | CCCTCCCTCCCCTC
 |  | Ston1 | -17 | -3 | - | 7.88 | CCCTCCCCTTCCTC
 |  | Tgfb3 | -64 | -50 | - | 7.45 | CCCTCCCTCCCTCC
 |  | Thy1 | -70 | -56 | - | 6.02 | CCCCCTCCATCCTT
 |  | Thy1 | -12 | 2 | - | 5.95 | CCCCCCTCTCTCCC
 |  | Trib2 | -34 | -20 | + | 6.01 | CGAAGAGGGCGGGG
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
10 | V$EGR3_01 | Egr-3 | 17.8865145874 | 0.716911929349 | -217:-181 | 3.4793261032e-07
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | Anxa3 | -181 | -169 | + | 3.28 | GGGGGTGGGAGT
 |  | Arrdc3 | -209 | -197 | + | 2.07 | TGGCGGGGGTGG
 |  | Dusp5 | -214 | -202 | + | 1.92 | ATGCGTGAGTGA
 |  | Ehd2 | -186 | -174 | - | 5.19 | CCCCCCACGCGG
 |  | F2r | -205 | -193 | - | 3.93 | ACTCCCAGGCTT
 |  | Fhdc1 | -191 | -179 | + | 2.05 | TGGCGAGGGCGA
 |  | Fhl3 | -193 | -181 | + | 1.91 | GGGCGCAGGAGG
 |  | [NAME] | -195 | -183 | - | 3.83 | ACACCCACACTC
 |  | Id1 | -186 | -174 | - | 3.3 | CCTCCCACCCTT
 |  | Il1rap | -196 | -184 | - | 2.35 | TGGCCCACGCGG
 |  | Klf4 | -212 | -200 | - | 5.36 | CCGCCCGCGCCC
 |  | Klf4 | -195 | -183 | - | 2.64 | TCGCCCCCGCCC
 |  | [NAME] | -217 | -205 | + | 2.66 | GGGCGTGGGTCG
 |  | [NAME] | -185 | -173 | + | 2.08 | CAACGCGGGCGG
 |  | [NAME] | -209 | -197 | - | 5.07 | CCGCCCACACGC
 |  | Mab21l1 | -183 | -171 | + | 2.07 | TGGCCTGGGTGG
 |  | Smad7 | -210 | -198 | + | 4.61 | GGGCGGAGGCGG
 |  | Tagln2 | -195 | -183 | + | 2 | CCACGTGGGGGT
 |  | Trim59 | -201 | -189 | - | 1.92 | TCACCCGCGCAT
 |  | Trim59 | -187 | -175 | - | 4.49 | CCGCCCTCGCGA
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
11 | V$EGR2_01 | Egr-2 | 17.0938866358 | 0.685880038069 | -57:0 | 6.36251735199e-07
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 1110012J17Rik | -43 | -31 | + | 5.3 | GGGCGTGCGCGT
 |  | Angptl4 | -18 | -6 | - | 5.8 | CCTCCCACTCCC
 |  | Arrdc3 | -40 | -28 | - | 4.07 | GCGCCTGCGCAC
 |  | Bnc1 | -47 | -35 | - | 5.63 | CCGCCCACTTCT
 |  | Bnc1 | -23 | -11 | + | 3.32 | GGGCGGGGGTGG
 |  | Dusp5 | -10 | 2 | - | 5.06 | ACGCGCACTCAT
 |  | Egr2 | -8 | 4 | - | 7.13 | CCGCCCACGTGC
 |  | Enpp1 | -30 | -18 | - | 8.43 | ACGCCCACGTCA
 |  | Enpp1 | -7 | 5 | - | 3.4 | TAGCCCACGCGC
 |  | Fhl3 | 0 | 12 | - | 4.92 | GCGCCCACTCGC
 |  | Flnc | -55 | -43 | + | 4.68 | GGGCGGAGGCGG
 |  | [NAME] | -25 | -13 | - | 3.28 | GCTCCCACTCCT
 |  | Il1rap | -50 | -38 | + | 7.44 | CCGCGTGGGTGG
 |  | Lamb1 | -16 | -4 | - | 4.7 | CCGCCCCCGCTC
 |  | Marveld1 | -15 | -3 | + | 4.41 | GCGAGTAGGAGG
 |  | Myadm | -42 | -30 | - | 4.41 | TCGCCTACCCAT
 |  | Myc | -49 | -37 | - | 4.41 | CCGCCCACCCGC
 |  | Osr1 | -5 | 7 | + | 7.27 | ATAAGTAGGCGG
 |  | Pdlim5 | -25 | -13 | + | 3.8 | GCGCGGAGGCGG
 |  | Phldb2 | -26 | -14 | + | 4.65 | TTGAGTAGGCCT
 |  | Sertad4 | -39 | -27 | + | 4.68 | GGGCGGAGGCGG
 |  | Trib2 | -57 | -45 | + | 5.17 | GGGCGTGGGTAG
 |  | Trim59 | -46 | -34 | + | 4.99 | TGGCGGAGGCGG
 |  | Trim59 | -2 | 10 | - | 4.2 | CCGCCCCCGCCG
 |  | [NAME] | -16 | -4 | + | 4.2 | CGGCGGGGGCGG
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
12 | V$MIF1_01 | MIF-1 | 21.3603357987 | 0.553703709609 | -384:-303 | 1.38240256256e-06
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | Capn2 | -377 | -359 | + | 6.72 | GGGGTGGTAGGTAACATG
 |  | Ccnd1 | -377 | -359 | - | 4.32 | AGGGTGTCCTTGCACCCC
 |  | Dusp5 | -307 | -289 | + | 2.49 | CCGTAGCGCGGCCACGGT
 |  | E2f8 | -383 | -365 | - | 1.52 | CCGGTTGACGTGGCACCA
 |  | Ets1 | -357 | -339 | + | 1.58 | CTGGTGCATGCCAAGTGT
 |  | Grb14 | -382 | -364 | + | -0.26 | CTGTTGGATAGTAATCTT
 |  | Id1 | -374 | -356 | + | -0.19 | CTTGTCCTGAGTCACTGG
 |  | Igfbp6 | -306 | -288 | + | -0.99 | [NAME]
 |  | Il1rap | -359 | -341 | - | 1.19 | ACCGTAGGCTAGGACCCA
 |  | Klf4 | -339 | -321 | + | 2.89 | GAGTAGCGCGGCCACGGG
 |  | [NAME] | -364 | -346 | - | 0.65 | GGGGTTGCGGTGAACCGA
 |  | [NAME] | -303 | -285 | + | 2.6 | TGTTGCCTTGGCAACAGG
 |  | Midn | -376 | -358 | - | -0.65 | CTGCTGACTAAGGAACCC
 |  | Myadm | -384 | -366 | - | -0.52 | AAANNNNNNNNNNNNNNN
 |  | Myadm | -366 | -348 | + | 0 | NNNNNNNNNNNNNNNNNN
 |  | Myadm | -348 | -330 | + | 0 | NNNNNNNNNNNNNNNNNN
 |  | Myadm | -330 | -312 | + | 0 | NNNNNNNNNNNNNNNNNN
 |  | Myadm | -312 | -294 | + | 0 | NNNNNNNNNNNNNNNNNN
 |  | Ptgfr | -368 | -350 | - | 1.91 | GCAGGTGCTTAAGAACGC
 |  | Ptgfr | -311 | -293 | - | 0.32 | CCAGTGACAGTGGAGCCT
 |  | S100a4 | -374 | -356 | + | 2.1 | TCGTTCCTGGGCCACATA
 |  | S100a6 | -327 | -309 | - | -0.37 | GGAATTGCCTAAGACCAT
 |  | Trib2 | -338 | -320 | + | 3.58 | GTGTTGCGTGGCGACGGT
 |  | Trim59 | -336 | -318 | - | 1.01 | CCGGTGACTGAACAAGGA
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
13 | [NAME] | Egr-1 | 17.4600094237 | 0.677586769064 | - 99 : 8 | 1.52371462443e-06
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 1110012J17Rik | -43 | -31 | + | 3.39 | GGGCGTGCGCGT
 |  | Angptl4 | -12 | 0 | - | 3.73 | ACTCCCACACCC
 |  | Arrdc3 | -86 | -74 | + | 2.95 | CCGCGCGGGAGG
 |  | Bnc1 | -23 | -11 | + | 5.41 | GGGCGGGGGTGG
 |  | Capn2 | -13 | -1 | + | 3.35 | CTGGGGAGGCGG
 |  | Col12a1 | -97 | -85 | + | 7.04 | [NAME]
 |  | Col12a1 | -24 | -12 | - | 4.21 | CCGCCCCCGGAG
 |  | E2f8 | 8 | 20 | - | 3.39 | ACGGCCACGCTC
 |  | Egr2 | -8 | 4 | - | 5.93 | CCGCCCACGTGC
 |  | Egr3 | -54 | -42 | + | 3.68 | AGGCGGCGGCGG
 |  | Egr3 | -39 | -27 | + | 3.61 | TGGCGGCGGCGG
 |  | Enpp1 | -30 | -18 | - | 8.77 | ACGCCCACGTCA
 |  | Fhl3 | -99 | -87 | + | 3.33 | AGGAGGGGGCGG
 |  | Fhl3 | 8 | 20 | - | 2.86 | TCGCCCACACAG
 |  | Filip1l | -90 | -78 | - | 4.43 | ACACCCTCGCAC
 |  | Flnc | -55 | -43 | + | 6.53 | GGGCGGAGGCGG
 |  | Fosl2 | -81 | -69 | + | 6.7 | GCGCGGGGGCGG
 |  | [NAME] | -70 | -58 | + | 3.58 | CGGCGCGGGAGG
 |  | Il1rap | -50 | -38 | + | 6.51 | CCGCGTGGGTGG
 |  | Il1rap | -4 | 8 | + | 7.46 | TGGCGGGGGAGG
 |  | Klhdc8a | -93 | -81 | - | 3.35 | CCGCCTCCTCAC
 |  | Klhdc8a | -58 | -46 | - | 2.83 | CCGCCCCCACGC
 |  | Lamb1 | -16 | -4 | - | 7.33 | CCGCCCCCGCTC
 |  | [NAME] | -11 | 1 | - | 7.53 | CCTCCCCCGCCT
 |  | Lima1 | -80 | -68 | + | 2.95 | CCGCGCGGGAGG
 |  | [NAME] | -77 | -65 | - | 4.82 | CCGCCCCCGTCC
 |  | [NAME] | -40 | -28 | - | 2.79 | CCTCCTCCACCA
 |  | Myadm | -16 | -4 | - | 3.51 | CCACCCCCACTT
 |  | Nuak2 | -57 | -45 | + | 5.12 | ACGCAGGGGCGT
 |  | Osr1 | -95 | -83 | + | 4.19 | ATGCGCAGGCGC
 |  | Osr1 | -5 | 7 | + | 4.55 | ATAAGTAGGCGG
 |  | Pdlim5 | -25 | -13 | + | 5.9 | GCGCGGAGGCGG
 |  | Sertad4 | -39 | -27 | + | 6.53 | GGGCGGAGGCGG
 |  | [NAME] | 2 | 14 | - | 3.64 | AGGCCTCCGCAC
 |  | Socs5 | -92 | -80 | + | 2.53 | [NAME]
 |  | Socs5 | -62 | -50 | + | 3.55 | TGGCGGGGGCAT
 |  | Trim59 | -64 | -52 | - | 5.36 | CCGCCCGCGCTC
 |  | Trim59 | -46 | -34 | + | 8.44 | TGGCGGAGGCGG
 |  | Trim59 | -2 | 10 | - | 7.33 | CCGCCCCCGCCG
 |  | Zbtb37 | 2 | 14 | + | 3.33 | AGGAGGGGGCGG
 |  | [NAME] | -16 | -4 | + | 7.33 | CGGCGGGGGCGG
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
14 | V$NGFIC_01 | NGFI-C | 17.4047747502 | 0.692772606229 | -217:-180 | 3.69131267807e-06
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | Anxa3 | -185 | -173 | + | 6.4 | AGGAGGGGGTGG
 |  | Arrdc3 | -209 | -197 | + | 8.81 | TGGCGGGGGTGG
 |  | Bnc1 | -197 | -185 | - | 5.41 | ACACCCCCTCGA
 |  | Col1a2 | -200 | -188 | - | 2.45 | TCTCCTACTCCA
 |  | Dusp5 | -214 | -202 | + | 4.29 | ATGCGTGAGTGA
 |  | Emp1 | -199 | -187 | - | 2.56 | CCTCTTACTCAT
 |  | F2r | -205 | -193 | - | 3.53 | ACTCCCAGGCTT
 |  | Fhdc1 | -191 | -179 | + | 2.23 | TGGCGAGGGCGA
 |  | [NAME] | -195 | -183 | - | 3.26 | ACACCCACACTC
 |  | Id1 | -186 | -174 | - | 4.5 | CCTCCCACCCTT
 |  | Klf4 | -212 | -200 | - | 4.43 | CCGCCCGCGCCC
 |  | Klf4 | -195 | -183 | - | 4.63 | TCGCCCCCGCCC
 |  | [NAME] | -217 | -205 | + | 3.83 | GGGCGTGGGTCG
 |  | [NAME] | -209 | -197 | - | 4.68 | CCGCCCACACGC
 |  | Mab21l1 | -183 | -171 | + | 5.07 | TGGCCTGGGTGG
 |  | Myc | -181 | -169 | - | 4.27 | CCTCCTCCTCTT
 |  | Nrp1 | -214 | -202 | + | 2.33 | ACCCGGAGGTGG
 |  | Smad7 | -210 | -198 | + | 6.94 | GGGCGGAGGCGG
 |  | Trib2 | -202 | -190 | + | 2.56 | ATCCGGGGGCGA
 |  | Trim59 | -201 | -189 | - | 4.39 | TCACCCGCGCAT
 |  | Trim59 | -187 | -175 | - | 5.95 | CCGCCCTCGCGA
 |  | Zbtb37 | -215 | -203 | - | 5.03 | ACTCCTCCTCAA
 |  | Zcchc24 | -180 | -168 | + | 2.52 | TCGGGGAGGCGG
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
15 | V$NMYC_01 | N-Myc | 10.7086491854 | 0.604166666046 | -197:-83 | 5.15787026553e-06
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 1110012J17Rik | -143 | -131 | - | 6.94 | GGACGCGTGGGC
 |  | Bcl2l1 | -89 | -77 | + | 6.65 | TTCCACGCGCCT
 |  | Bnc1 | -96 | -84 | - | 7.28 | GTGCACGAGGGG
 |  | Dlx2 | -145 | -133 | + | 8.21 | CGCCACGTGACA
 |  | Ehd2 | -184 | -172 | + | 6.23 | CCCCACGCGGTC
 |  | F2r | -100 | -88 | - | 6.46 | GGGCACGAGCGG
 |  | H1f0 | -151 | -139 | + | 5.81 | AGCCACGCGTAG
 |  | Il1rap | -194 | -182 | - | 5.79 | GCCCACGCGGTG
 |  | Il1rap | -146 | -134 | + | 6.47 | CCCCACGCGGCT
 |  | Il1rap | -111 | -99 | + | 6.5 | CCCCGCGTGCGG
 |  | Klf10 | -132 | -120 | + | 6.47 | TCACGCGTGGCT
 |  | Klf4 | -185 | -173 | + | 8.56 | CCCCACGTGCGC
 |  | Lima1 | -128 | -116 | - | 5.86 | GGTCACGAGTTG
 |  | [NAME] | -88 | -76 | + | 8.86 | AACCACGTGCCC
 |  | Mab21l1 | -127 | -115 | - | 6.52 | [NAME]
 |  | Nrp1 | -169 | -157 | - | 6.01 | AAGCACGCGGAG
 |  | Serpine1 | -169 | -157 | + | 8.78 | ACACACGTGTCC
 |  | Sertad4 | -88 | -76 | - | 6.08 | GCGCGCGTGGGG
 |  | Six1 | -147 | -135 | + | 5.76 | CCCCACGCGGGG
 |  | Snai1 | -159 | -147 | + | 6.01 | CGCCACGCGGCG
 |  | Tagln2 | -197 | -185 | + | 7.4 | AACCACGTGGGG
 |  | Trim16 | -83 | -71 | + | 7.32 | GCACACGTGGTC
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
16 | V$PAX4_03 | Pax-4 | 7.39832657386 | 0.582107854386 | -240:-204 | 6.99423598105e-06
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 1110012J17Rik | -231 | -219 | + | 6.14 | TCCCTTCACCCC
 |  | 6330406I15Rik | -216 | -204 | - | 6.09 | CAGGTGGGTGTT
 |  | Bnc1 | -204 | -192 | + | 5.97 | CCTCCCCACACC
 |  | Dusp5 | -220 | -208 | - | 6.1 | GGGGTGATGCGT
 |  | Dusp6 | -240 | -228 | + | 6.14 | CTCCTCCACCGC
 |  | Egr3 | -211 | -199 | + | 6.43 | CCCATCCACCCC
 |  | H1f0 | -204 | -192 | - | 6.19 | ACGGTGGGGGCT
 |  | [NAME] | -207 | -195 | + | 6.3 | GTCATTCACCCT
 |  | Id3 | -232 | -220 | + | 5.92 | CAGCTTCACCGC
 |  | Igfbp6 | -236 | -224 | + | 7.85 | [NAME]
 |  | Igfbp6 | -222 | -210 | + | 5.85 | TATTCTCACACT
 |  | [NAME] | -228 | -216 | - | 6.14 | AGGGTGTGGAAG
 |  | Lima1 | -218 | -206 | - | 5.85 | AGGGTGAGCCAG
 |  | Nrp1 | -204 | -192 | - | 6.83 | [NAME]
 |  | Pdgfra | -238 | -226 | + | 7.16 | GCCCCCCACCCC
 |  | S100a4 | -229 | -217 | + | 6.72 | GGTGTCCACCCC
 |  | Sertad4 | -232 | -220 | - | 7.62 | GGGGTGGGAAAG
 |  | Sox9 | -222 | -210 | + | 6.48 | TCCCCTCACCCC
 |  | Sox9 | -210 | -198 | + | 6.43 | ACCATCCACCCT
 |  | Ston1 | -206 | -194 | + | 5.85 | CAATCTCACACC
 |  | Thy1 | -219 | -207 | + | 7.01 | [NAME]
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
17 | V$AP4_01 | AP-4 | 19.3698223529 | 0.600000008113 | 12 : 81 | 1.089252509e-05
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 2310014H01Rik | 78 | 96 | - | 1.21 | CTGGCAGCCGCCTTCTCT
 |  | Arl4c | 44 | 62 | - | 3.1 | CCGGCCGCAGCAGGCTGG
 |  | Arrdc3 | 12 | 30 | - | 0.64 | CAGCCTCCAGCCGCCCGT
 |  | Capn2 | 27 | 45 | - | 2.12 | CTTCCCGCCGGTGAATCA
 |  | Ccnd1 | 30 | 48 | - | 0.81 | CAGCCTCCAGAGGGCTGT
 |  | Cdc42ep2 | 72 | 90 | - | 0.92 | CTGCCTCCAGCTCTCCAA
 |  | Egr2 | 18 | 36 | + | 4.01 | [NAME]
 |  | Elk3 | 48 | 66 | + | 0.86 | GCGCACAGCCGCGGCCCG
 |  | Fhl3 | 16 | 34 | + | 1.72 | ACAGTCAGTCGCAGCCGG
 |  | Filip1l | 49 | 67 | + | 1.04 | TGGCAAAGCTGTGGGGTG
 |  | Il1rap | 26 | 44 | + | 0.93 | AGAAAGTGCGGCGGAAAG
 |  | Il1rap | 65 | 83 | - | 8.18 | CTGCCAGCATCTGGCTTT
 |  | Klf4 | 15 | 33 | + | 0.93 | AGAGCGAGCGCGGCTCCG
 |  | Klhdc8a | 47 | 65 | - | 1.54 | TCGCCCGGGGCTGACGCA
 |  | Lamb1 | 77 | 95 | - | 6.4 | CTGCCAGGAGCGGGTTGA
 |  | Lbh | 78 | 96 | - | 6.11 | CGGACCGGCGCTAGCCCA
 |  | Met | 81 | 99 | - | 1.04 | CCGGGCGCCGCTGTTGCC
 |  | Msh6 | 18 | 36 | + | 1.14 | CCCGCCAGCGGCGGCCGC
 |  | Myc | 38 | 56 | + | 0.92 | TCACTCAGCTCCCCTCCT
 |  | Myo1c | 23 | 41 | - | 5.25 | ACTGCTCCAGCTGTGTCC
 |  | Osr1 | 58 | 76 | - | 1.43 | CTCGCCGGCACTGGTTCA
 |  | Oxct1 | 57 | 75 | - | 0.86 | GCGCCCGCCGCTGCGGGT
 |  | Pi15 | 60 | 78 | - | 6.11 | CTTACAAGAGTTGATGCT
 |  | Rhoj | 36 | 54 | + | 4.62 | TCGGCAAGCTGGAGGAAG
 |  | Rrm2 | 49 | 67 | - | 1.32 | CGGATTCCAGCTGTTTTC
 |  | Sdpr | 80 | 98 | - | 0.81 | CTGGGTGGAGCAGGTCCT
 |  | [NAME] | 60 | 78 | + | 1.78 | TGCGCTGGCTGCGGGCCT
 |  | Styk1 | 37 | 55 | - | 2.53 | CGTGCCTCACCTGTCTCT
 |  | Thy1 | 37 | 55 | + | 0.92 | TGCAGCAACTGGAGGCGT
 |  | Trib2 | 15 | 33 | + | 3.77 | AGACCGAGCGCGAGCAAG
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
18 | [NAME] | Egr-1 | 17.4600094237 | 0.677586769064 | -215:-182 | 1.41798715404e-05
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | Arrdc3 | -209 | -197 | + | 7.31 | TGGCGGGGGTGG
 |  | Bhlhe40 | -205 | -193 | - | 2.37 | CCTCCCCGGCAG
 |  | Ehd2 | -186 | -174 | - | 2.72 | CCCCCCACGCGG
 |  | F2r | -205 | -193 | - | 3.6 | ACTCCCAGGCTT
 |  | Fhl3 | -193 | -181 | + | 2.78 | GGGCGCAGGAGG
 |  | [NAME] | -195 | -183 | - | 3.58 | ACACCCACACTC
 |  | Id1 | -186 | -174 | - | 3.29 | CCTCCCACCCTT
 |  | Klf4 | -212 | -200 | - | 5.36 | CCGCCCGCGCCC
 |  | Klf4 | -189 | -177 | - | 4.81 | CCGCCCCCACGT
 |  | [NAME] | -185 | -173 | + | 2.85 | CAACGCGGGCGG
 |  | [NAME] | -209 | -197 | - | 4.57 | CCGCCCACACGC
 |  | Mab21l1 | -183 | -171 | + | 3.07 | TGGCCTGGGTGG
 |  | Myadm | -186 | -174 | - | 2.51 | ACTCTCACACAT
 |  | Pdlim5 | -182 | -170 | + | 2.54 | TTGTGGCGGCGG
 |  | Sertad4 | -195 | -183 | - | 4.21 | ACGCACACACAA
 |  | Smad7 | -210 | -198 | + | 6.53 | GGGCGGAGGCGG
 |  | Trim59 | -201 | -189 | - | 3.06 | TCACCCGCGCAT
 |  | Trim59 | -187 | -175 | - | 4.53 | CCGCCCTCGCGA
 |  | Zbtb37 | -215 | -203 | - | 3.79 | ACTCCTCCTCAA
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
19 | V$EGR3_01 | Egr-3 | 17.8865145874 | 0.716911929349 | -90:-2 | 2.37449800186e-05
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 1110012J17Rik | -43 | -31 | + | 5.99 | GGGCGTGCGCGT
 |  | Angptl4 | -18 | -6 | - | 2.66 | CCTCCCACTCCC
 |  | Arrdc3 | -86 | -74 | + | 2.37 | CCGCGCGGGAGG
 |  | Bnc1 | -23 | -11 | + | 2.66 | GGGCGGGGGTGG
 |  | E2f8 | -81 | -69 | + | 2.76 | GGGCGTGGGGGA
 |  | Egr2 | -8 | 4 | - | 7.24 | CCGCCCACGTGC
 |  | Enpp1 | -30 | -18 | - | 7.57 | ACGCCCACGTCA
 |  | Enpp1 | -7 | 5 | - | 2.35 | TAGCCCACGCGC
 |  | Filip1l | -90 | -78 | - | 5.17 | ACACCCTCGCAC
 |  | Flnc | -55 | -43 | + | 4.61 | GGGCGGAGGCGG
 |  | Fosl2 | -81 | -69 | + | 5.07 | GCGCGGGGGCGG
 |  | [NAME] | -70 | -58 | + | 2.66 | CGGCGCGGGAGG
 |  | Il1rap | -50 | -38 | + | 8.36 | CCGCGTGGGTGG
 |  | Il1rap | -4 | 8 | + | 2.07 | TGGCGGGGGAGG
 |  | Lamb1 | -16 | -4 | - | 5.91 | CCGCCCCCGCTC
 |  | Lbh | -82 | -70 | + | 3.29 | AAGAGTGGGCGA
 |  | [NAME] | -11 | 1 | - | 2.76 | CCTCCCCCGCCT
 |  | Lima1 | -80 | -68 | + | 2.37 | CCGCGCGGGAGG
 |  | Myadm | -42 | -30 | - | 3.88 | TCGCCTACCCAT
 |  | Myc | -49 | -37 | - | 5.07 | CCGCCCACCCGC
 |  | Osr1 | -5 | 7 | + | 2.78 | ATAAGTAGGCGG
 |  | Pdlim5 | -25 | -13 | + | 4.33 | GCGCGGAGGCGG
 |  | Sertad4 | -39 | -27 | + | 4.61 | GGGCGGAGGCGG
 |  | Trib2 | -57 | -45 | + | 2.66 | GGGCGTGGGTAG
 |  | Trim59 | -64 | -52 | - | 5.91 | CCGCCCGCGCTC
 |  | Trim59 | -46 | -34 | + | 4.03 | TGGCGGAGGCGG
 |  | Trim59 | -2 | 10 | - | 5.36 | CCGCCCCCGCCG
 |  | [NAME] | -16 | -4 | + | 5.36 | CGGCGGGGGCGG
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
20 | V$CDXA_01 | CdxA | 4.79520357579 | 0.263157900955 | - 36 : 1 | 6.05066928641e-05
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 2310014H01Rik | -8 | -1 | - | 5.84 | TATAAAT
 |  | Angptl4 | 1 | 8 | + | 5.44 | [NAME]
 |  | Cdc42ep2 | -21 | -14 | + | 6.24 | ATTTATG
 |  | Col1a2 | -29 | -22 | - | 6.24 | CATAAAT
 |  | Lbh | -29 | -22 | - | 5.84 | TATAAAT
 |  | Mab21l1 | -33 | -26 | + | 5.44 | [NAME]
 |  | Myc | -36 | -29 | + | 5.44 | [NAME]
 |  | S100a4 | -31 | -24 | - | 5.84 | TATAAAT
 |  | Serpine1 | -28 | -21 | - | 5.44 | TATAAAG
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
21 | V$IK3_01 | Ik-3 | 14.9455519733 | 0.486153847896 | -415:-378 | 8.46528767273e-05
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | 1110012J17Rik | -412 | -399 | + | 4.52 | TACCAGGAATCCT
 |  | 6330406I15Rik | -415 | -402 | + | 3.84 | TGCCTGGAATGTC
 |  | B130024G19Rik | -380 | -367 | + | 7.44 | GGCAAGGAATTTC
 |  | Bnc1 | -388 | -375 | + | 8.34 | GCCAGGGAACTTC
 |  | Elk3 | -381 | -368 | + | 5.05 | TCTTAGGAAGACT
 |  | Id1 | -390 | -377 | + | 4.64 | ATCTGGGAATCCT
 |  | [NAME] | -408 | -395 | - | 5.32 | AGGATTCCCTGTC
 |  | [NAME] | -378 | -365 | + | 4.22 | TCCTGGAAATGTT
 |  | Msh6 | -403 | -390 | - | 4.24 | GGCATTCACAAGT
 |  | Nab2 | -392 | -379 | + | 4.75 | GGCTGGAAATTCC
 |  | Osr1 | -395 | -382 | + | 3.52 | GTGTGGGGACACC
 |  | Rrm2 | -401 | -388 | + | 4.08 | TTTAGGGAACCCT
 |  | Sdpr | -390 | -377 | - | 5.28 | TGAGTTCCTTGTC
 |  | Styk1 | -396 | -383 | - | 6.66 | ATTATTCCTAGGT
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
22 | V$EGR2_01 | Egr-2 | 17.0938866358 | 0.685880038069 | -218:-178 | 8.58886942291e-05
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | Anxa3 | -181 | -169 | + | 2.65 | GGGGGTGGGAGT
 |  | Arrdc3 | -218 | -206 | + | 3.63 | TGGCGGGGGTGG
 |  | Arrdc3 | -200 | -188 | + | 3.63 | TGGCGGGGGTGG
 |  | Clcf1 | -178 | -166 | - | 4.35 | AAGCCCACACCA
 |  | Col1a2 | -200 | -188 | - | 2.84 | TCTCCTACTCCA
 |  | Dusp5 | -214 | -202 | + | 2.94 | ATGCGTGAGTGA
 |  | Ehd2 | -186 | -174 | - | 3.51 | CCCCCCACGCGG
 |  | Fhdc1 | -191 | -179 | + | 2.74 | TGGCGAGGGCGA
 |  | [NAME] | -195 | -183 | - | 5.83 | ACACCCACACTC
 |  | Klf4 | -212 | -200 | - | 5.19 | CCGCCCGCGCCC
 |  | [NAME] | -217 | -205 | + | 3.35 | GGGCGTGGGTCG
 |  | [NAME] | -209 | -197 | - | 7.2 | CCGCCCACACGC
 |  | Mab21l1 | -183 | -171 | + | 3.63 | TGGCCTGGGTGG
 |  | Nuak2 | -178 | -166 | + | 3.51 | CCAAGTGGGCGG
 |  | Sertad4 | -195 | -183 | - | 4.65 | ACGCACACACAA
 |  | Smad7 | -210 | -198 | + | 4.68 | GGGCGGAGGCGG
 |  | Trim59 | -201 | -189 | - | 2.94 | TCACCCGCGCAT
 |  | Trim59 | -187 | -175 | - | 4.62 | CCGCCCTCGCGA
Results for Cluster 5:
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
1 | V$NFY_01 | NF-Y | 12.7728840972 | 0.523544444998 | -204:-18 | 1.67061689181e-23
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | Kif18b | -58 | -42 | + | 11.46 | AACAGCCAATCAGCGA
 |  | Kif18b | -35 | -19 | + | 10.04 | GGTGACCAATGAGAAG
 |  | Angptl2 | -30 | -14 | + | 5.88 | TGCAGCCAACCAGGGT
 |  | Arhgap11a | -86 | -70 | + | 10.13 | GCGGGCCAATCGGATG
 |  | Aurkb | -56 | -40 | + | 10.89 | CGTAGCCAATGAGAGT
 |  | Aurkb | -26 | -10 | + | 7.74 | CTCAGCCAATGGACCT
 |  | Bub1 | -68 | -52 | - | 8.67 | GCAGCGATTGGCCAGC
 |  | Bub1 | -41 | -25 | + | 5.91 | GGAGACCAATAGTCAG
 |  | C330027C09Rik | -86 | -70 | + | 8.24 | CCCTGCCAATCACCGA
 |  | [NAME] | -20 | -4 | + | 8.6 | CGGCGCCAATGGGAAG
 |  | Cdk1 | -60 | -44 | - | 11.94 | GCTCTGATTGGCTCCT
 |  | Cdk1 | -28 | -12 | - | 7.96 | AATCGGATTGGCGGAT
 |  | Cenpf | -137 | -121 | + | 10.84 | AAGGGCCAATCAGAGG
 |  | Cenpf | -76 | -60 | + | 9.5 | CATGGCCAATGGGCGT
 |  | Ckap2l | -127 | -111 | + | 6.67 | ACTCTCCAATCGCAGA
 |  | Ckap2l | -46 | -30 | - | 7.16 | [NAME]
 |  | Ckap2l | -19 | -3 | + | 8.78 | GGAAGCCAATAGGAGC
 |  | Espl1 | -50 | -34 | - | 11.08 | TCGCTGATTGGTCACT
 |  | Hist1h2af | -166 | -150 | + | 8.38 | ACTATCCAATCAAAAC
 |  | Hist1h2af | -131 | -115 | - | 8.27 | GCTACCATTGGTTTAG
 |  | Hist1h2af | -102 | -86 | + | 5.06 | TGTAGCCAACGAGATC
 |  | Hist1h2ak | -91 | -75 | + | 7.33 | AATACCCAATCATAGC
 |  | Hist1h2ak | -56 | -40 | - | 7.68 | TCTGTTATTGGTCTAG
 |  | Hist1h2ak | -26 | -10 | + | 7.74 | TGTAACCAATGAAATT
 |  | Hist1h2an | -204 | -188 | - | 10.43 | TTTCTGATTGGTTAAA
 |  | Hist1h2an | -167 | -151 | + | 4.91 | AGCGCCCAATGGAACT
 |  | Hist1h2an | -134 | -118 | - | 9.43 | CCTCCCATTGGTCTAG
 |  | Hist1h2an | -105 | -89 | + | 8.97 | GCCAGCCAATCGCGTA
 |  | Hist1h2ao | -103 | -87 | - | 10.1 | CCTATGATTGGTTCAT
 |  | Hist1h2ao | -63 | -47 | + | 4.83 | CTTGTCCAATTGACGT
 |  | Hist1h2bc | -181 | -165 | - | 7.71 | TACTTGATTGGTTACA
 |  | Hist1h2bc | -151 | -135 | + | 6.17 | TATAGCCAATAGAAAA
 |  | Hist1h2be | -158 | -142 | - | 8.33 | GTCCCGATTGGTGAAA
 |  | Hist1h2be | -130 | -114 | + | 8.83 | GACAGCCAATGAGACA
 |  | Hist1h3a | -100 | -84 | + | 10.8 | ATAAACCAATCAGAGT
 |  | Hist1h3a | -58 | -42 | + | 6.64 | TTCATCCAATCACTAT
 |  | Hist1h3g | -203 | -187 | + | 9.77 | GTTAACCAATCGGGTG
 |  | Hist1h3g | -180 | -164 | + | 10.22 | [NAME]
 |  | Hist1h3g | -156 | -140 | + | 6.65 | CTCAGCCAATAGTACT
 |  | Hist2h2aa1 | -102 | -86 | - | 9.56 | GCTCCTATTGGCCACG
 |  | Hist2h2aa1 | -72 | -56 | + | 11.45 | GTGAGCCAATGAGAGC
 |  | [NAME] | -178 | -162 | - | 6.22 | GAAGTGATTGGATAGA
 |  | [NAME] | -135 | -119 | - | 10.22 | CCTCTTATTGGCTACT
 |  | [NAME] | -102 | -86 | - | 8.61 | CTTCCGATTGGGCGGC
 |  | [NAME] | -26 | -10 | - | 11.8 | TTTCTGATTGGCTGAG
 |  | Incenp | -32 | -16 | - | 8.11 | TACGTGATTGGTTTGG
 |  | Kif11 | -72 | -56 | - | 8.01 | TCTGCTATTGGTCCGG
 |  | Kif2c | -100 | -84 | + | 5.47 | ACCAACCAACCAAAAA
 |  | Mki67 | -172 | -156 | - | 7 | CTCGCCATTGGTCTCT
 |  | Mki67 | -146 | -130 | + | 7.71 | CTGGCCCAATCGCAGC
 |  | Racgap1 | -18 | -2 | - | 11.06 | TCTGTGATTGGCTGGT
 |  | Shcbp1 | -128 | -112 | + | 5.35 | GTCCGCCAATCCCACA
 |  | Siah1b | -137 | -121 | - | 8.14 | GCTCTGATAGGCCAAT
 |  | Top2a | -195 | -179 | - | 7.73 | ATTGCTATTGGTCCAT
 |  | Top2a | -155 | -139 | - | 6.85 | TACCTAATTGGTTTAT
 |  | Top2a | -104 | -88 | - | 9.1 | TCTACGATTGGTTACT
 |  | Top2a | -83 | -67 | + | 10.74 | CAGAGCCAATGAGAGC
 |  | Top2a | -64 | -48 | - | 10.1 | TCGGTGATTGGTTCCT
 |  | Zfp36l2 | -164 | -148 | + | 10.53 | GGCGACCAATGAGAAG
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
2 | V$NFY_Q6 | NF-Y | 11.9351525509 | 0.472727279771 | -201:-15 | 2.31791799718e-19
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | Kif18b | -56 | -45 | + | 9.15 | CAGCCAATCAG
 |  | Kif18b | -33 | -22 | + | 9.78 | TGACCAATGAG
 |  | Arhgap11a | -84 | -73 | + | 8.23 | GGGCCAATCGG
 |  | Aurkb | -54 | -43 | + | 9.93 | TAGCCAATGAG
 |  | Aurkb | -37 | -26 | - | 5.74 | CTGAGTGGCGG
 |  | Aurkb | -24 | -13 | + | 6.14 | CAGCCAATGGA
 |  | Bub1 | -65 | -54 | - | 9.36 | GCGATTGGCCA
 |  | Bub1 | -39 | -28 | + | 6.25 | AGACCAATAGT
 |  | [NAME] | -18 | -7 | + | 7.04 | GCGCCAATGGG
 |  | Cdk1 | -57 | -46 | - | 9.43 | CTGATTGGCTC
 |  | Cenpf | -135 | -124 | + | 8.83 | GGGCCAATCAG
 |  | Cenpf | -74 | -63 | + | 8.72 | TGGCCAATGGG
 |  | Ckap2l | -125 | -114 | + | 6.78 | TCTCCAATCGC
 |  | Ckap2l | -43 | -32 | - | 6.05 | TTTATTGGCGA
 |  | Ckap2l | -17 | -6 | + | 6.96 | [NAME]
 |  | Espl1 | -47 | -36 | - | 10.28 | CTGATTGGTCA
 |  | Hist1h2af | -164 | -153 | + | 6.63 | TATCCAATCAA
 |  | Hist1h2af | -128 | -117 | - | 7.54 | ACCATTGGTTT
 |  | Hist1h2ak | -89 | -78 | + | 7.98 | TACCCAATCAT
 |  | Hist1h2ak | -53 | -42 | - | 7.54 | GTTATTGGTCT
 |  | Hist1h2ak | -24 | -13 | + | 8.47 | TAACCAATGAA
 |  | Hist1h2an | -201 | -190 | - | 10.89 | CTGATTGGTTA
 |  | Hist1h2an | -131 | -120 | - | 7.49 | CCCATTGGTCT
 |  | Hist1h2an | -103 | -92 | + | 8.68 | CAGCCAATCGC
 |  | Hist1h2ao | -100 | -89 | - | 9.33 | ATGATTGGTTC
 |  | Hist1h2bc | -178 | -167 | - | 8.98 | TTGATTGGTTA
 |  | Hist1h2bc | -149 | -138 | + | 6.74 | TAGCCAATAGA
 |  | Hist1h2bc | -65 | -54 | - | 5.94 | GAGACTGGTTC
 |  | Hist1h2be | -155 | -144 | - | 9 | CCGATTGGTGA
 |  | Hist1h2be | -128 | -117 | + | 8.64 | CAGCCAATGAG
 |  | Hist1h3a | -98 | -87 | + | 9.2 | AAACCAATCAG
 |  | Hist1h3a | -56 | -45 | + | 7.38 | CATCCAATCAC
 |  | Hist1h3g | -201 | -190 | + | 10.28 | TAACCAATCGG
 |  | Hist1h3g | -178 | -167 | + | 11.02 | TAACCAATCAC
 |  | Hist1h3g | -154 | -143 | + | 6.8 | CAGCCAATAGT
 |  | Hist1h4d | -33 | -22 | - | 7.27 | GTCACTGGCTA
 |  | Hist1h4f | -133 | -122 | + | 5.85 | CAGCCAGTGAG
 |  | Hist2h2aa1 | -99 | -88 | - | 8.04 | CCTATTGGCCA
 |  | Hist2h2aa1 | -70 | -59 | + | 8.93 | GAGCCAATGAG
 |  | [NAME] | -175 | -164 | - | 8.67 | GTGATTGGATA
 |  | [NAME] | -132 | -121 | - | 9.24 | CTTATTGGCTA
 |  | [NAME] | -99 | -88 | - | 6.04 | CCGATTGGGCG
 |  | [NAME] | -23 | -12 | - | 9.15 | CTGATTGGCTG
 |  | Incenp | -29 | -18 | - | 9.33 | GTGATTGGTTT
 |  | Kif11 | -69 | -58 | - | 7.62 | GCTATTGGTCC
 |  | Mki67 | -169 | -158 | - | 7.62 | GCCATTGGTCT
 |  | Mki67 | -144 | -133 | + | 6.46 | GGCCCAATCGC
 |  | Racgap1 | -15 | -4 | - | 9.28 | GTGATTGGCTG
 |  | Siah1b | -129 | -118 | + | 6.96 | AGGCCAATAAG
 |  | Top2a | -192 | -181 | - | 7.62 | GCTATTGGTCC
 |  | Top2a | -152 | -141 | - | 6.94 | CTAATTGGTTT
 |  | Top2a | -101 | -90 | - | 9.73 | ACGATTGGTTA
 |  | Top2a | -81 | -70 | + | 8.93 | GAGCCAATGAG
 |  | Top2a | -61 | -50 | - | 10.02 | GTGATTGGTTC
 |  | Zfp36l2 | -162 | -151 | + | 8.49 | CGACCAATGAG
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
3 | V$CAAT_01 | CCAAT box | 10.751155233 | 0.480000012748 | -180:-14 | 3.87263747971e-16
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | Kif18b | -133 | -121 | + | 7.58 | TTTGGCCAAAGA
 |  | Kif18b | -58 | -46 | + | 9.63 | AACAGCCAATCA
 |  | Kif18b | -35 | -23 | + | 7.48 | GGTGACCAATGA
 |  | Arhgap11a | -86 | -74 | + | 6.77 | GCGGGCCAATCG
 |  | Aurkb | -56 | -44 | + | 10 | CGTAGCCAATGA
 |  | Aurkb | -26 | -14 | + | 8.8 | CTCAGCCAATGG
 |  | Bub1 | -64 | -52 | - | 7.95 | CGATTGGCCAGC
 |  | C330027C09Rik | -86 | -74 | + | 6.36 | CCCTGCCAATCA
 |  | Cdk1 | -56 | -44 | - | 9.26 | TGATTGGCTCCT
 |  | Cenpf | -137 | -125 | + | 8.6 | AAGGGCCAATCA
 |  | Cenpf | -76 | -64 | + | 8.54 | CATGGCCAATGG
 |  | Ckap2l | -155 | -143 | + | 5.82 | CCTAGCCATAGG
 |  | Ckap2l | -19 | -7 | + | 5.64 | GGAAGCCAATAG
 |  | Espl1 | -46 | -34 | - | 9.41 | TGATTGGTCACT
 |  | Hist1h2af | -166 | -154 | + | 9 | ACTATCCAATCA
 |  | Hist1h2af | -127 | -115 | - | 7.52 | CCATTGGTTTAG
 |  | Hist1h2ak | -91 | -79 | + | 7.41 | AATACCCAATCA
 |  | Hist1h2ak | -52 | -40 | - | 7.01 | TTATTGGTCTAG
 |  | Hist1h2ak | -26 | -14 | + | 9.29 | TGTAACCAATGA
 |  | Hist1h2an | -130 | -118 | - | 7.14 | CCATTGGTCTAG
 |  | Hist1h2an | -105 | -93 | + | 7.8 | GCCAGCCAATCG
 |  | Hist1h2ao | -99 | -87 | - | 8.71 | TGATTGGTTCAT
 |  | Hist1h2bc | -177 | -165 | - | 9.71 | TGATTGGTTACA
 |  | Hist1h2bc | -151 | -139 | + | 7.93 | TATAGCCAATAG
 |  | Hist1h2be | -130 | -118 | + | 7.7 | GACAGCCAATGA
 |  | Hist1h3a | -100 | -88 | + | 8.75 | [NAME]
 |  | Hist1h3a | -58 | -46 | + | 8.33 | TTCATCCAATCA
 |  | Hist1h3g | -180 | -168 | + | 8.38 | GTTAACCAATCA
 |  | Hist1h3g | -156 | -144 | + | 7.87 | CTCAGCCAATAG
 |  | Hist1h4d | -32 | -20 | - | 8.49 | TCACTGGCTAGT
 |  | Hist1h4f | -135 | -123 | + | 7.82 | TTCAGCCAGTGA
 |  | Hist2h2aa1 | -98 | -86 | - | 7.9 | CTATTGGCCACG
 |  | Hist2h2aa1 | -72 | -60 | + | 7.44 | GTGAGCCAATGA
 |  | [NAME] | -174 | -162 | - | 8.92 | TGATTGGATAGA
 |  | [NAME] | -131 | -119 | - | 9.09 | TTATTGGCTACT
 |  | [NAME] | -49 | -37 | - | 7.29 | GGATTGGCCAGA
 |  | [NAME] | -22 | -10 | - | 10.02 | TGATTGGCTGAG
 |  | Incenp | -28 | -16 | - | 8.81 | TGATTGGTTTGG
 |  | Kif11 | -68 | -56 | - | 6.25 | CTATTGGTCCGG
 |  | Kif2c | -116 | -104 | + | 6.25 | AAAAACCAAACA
 |  | Kif2c | -96 | -84 | + | 6 | ACCAACCAAAAA
 |  | Mki67 | -168 | -156 | - | 7.05 | CCATTGGTCTCT
 |  | Racgap1 | -14 | -2 | - | 10.12 | TGATTGGCTGGT
 |  | Siah1b | -131 | -119 | + | 7.69 | ATAGGCCAATAA
 |  | Spag5 | -111 | -99 | + | 6.18 | CGGAGCCACTGA
 |  | Top2a | -100 | -88 | - | 8.99 | CGATTGGTTACT
 |  | Top2a | -83 | -71 | + | 8.53 | CAGAGCCAATGA
 |  | Top2a | -60 | -48 | - | 8.6 | TGATTGGTTCCT
 |  | Zfp36l2 | -164 | -152 | + | 6.96 | GGCGACCAATGA
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
4 | V$NFY_C | NF-Y | 19.0425781706 | 0.424078402775 | - 180 : 12 | 3.93735804769e-11
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | Kif18b | -58 | -44 | - | 7.33 | AACAGCCAATCAGC
 |  | Kif18b | -35 | -21 | - | 6.61 | GGTGACCAATGAGA
 |  | Angptl2 | -30 | -16 | - | 6.28 | TGCAGCCAACCAGG
 |  | Arhgap11a | -86 | -72 | - | 0.8 | GCGGGCCAATCGGA
 |  | Aurkb | -56 | -42 | - | 3.7 | CGTAGCCAATGAGA
 |  | Aurkb | -38 | -24 | + | 0.64 | [NAME]
 |  | Bub1 | -66 | -52 | + | 4.74 | AGCGATTGGCCAGC
 |  | C330027C09Rik | -86 | -72 | - | 3.67 | CCCTGCCAATCACC
 |  | [NAME] | 12 | 26 | - | 6.92 | ACTGGCCAATGAGG
 |  | Cdk1 | -58 | -44 | + | 9.19 | TCTGATTGGCTCCT
 |  | Cdk1 | -26 | -12 | + | 1.23 | TCGGATTGGCGGAT
 |  | Cenpf | -137 | -123 | - | 2.42 | AAGGGCCAATCAGA
 |  | Cep55 | 5 | 19 | + | 0.88 | CCTGGTTGATAAGT
 |  | Ckap2l | -44 | -30 | + | 1.9 | TTTTATTGGCGAAT
 |  | Espl1 | -48 | -34 | + | 12.25 | GCTGATTGGTCACT
 |  | Hist1h2af | -166 | -152 | - | 8.78 | ACTATCCAATCAAA
 |  | Hist1h2af | -102 | -88 | - | 2.28 | TGTAGCCAACGAGA
 |  | Hist1h2ak | -26 | -12 | - | 7.34 | TGTAACCAATGAAA
 |  | Hist1h2an | -105 | -91 | - | 4.79 | GCCAGCCAATCGCG
 |  | Hist1h2ao | -101 | -87 | + | 3.23 | TATGATTGGTTCAT
 |  | Hist1h2ao | -5 | 9 | - | 4.69 | GTCAGCCAATCGCA
 |  | Hist1h2bc | -179 | -165 | + | 12.97 | CTTGATTGGTTACA
 |  | Hist1h2be | -156 | -142 | + | 1.78 | CCCGATTGGTGAAA
 |  | Hist1h2be | -130 | -116 | - | 1.69 | GACAGCCAATGAGA
 |  | Hist1h3a | -100 | -86 | - | 8.76 | ATAAACCAATCAGA
 |  | Hist1h3a | -58 | -44 | - | 5.02 | TTCATCCAATCACT
 |  | Hist1h3g | -180 | -166 | - | 11.31 | GTTAACCAATCACC
 |  | Hist1h4d | -34 | -20 | + | 1.16 | AGTCACTGGCTAGT
 |  | Hist2h2aa1 | -72 | -58 | - | 2.08 | GTGAGCCAATGAGA
 |  | [NAME] | -176 | -162 | + | 7.12 | AGTGATTGGATAGA
 |  | [NAME] | -133 | -119 | + | 9.01 | TCTTATTGGCTACT
 |  | [NAME] | -51 | -37 | + | 0.66 | CAGGATTGGCCAGA
 |  | [NAME] | -24 | -10 | + | 7.62 | TCTGATTGGCTGAG
 |  | Incenp | -30 | -16 | + | 1.98 | CGTGATTGGTTTGG
 |  | Kif2c | -108 | -94 | - | 0.39 | AACAACCAACCAAC
 |  | Racgap1 | -16 | -2 | + | 11.82 | TGTGATTGGCTGGT
 |  | Siah1b | -135 | -121 | + | 6.82 | TCTGATAGGCCAAT
 |  | Top2a | -153 | -139 | + | 2.4 | CCTAATTGGTTTAT
 |  | Top2a | -102 | -88 | + | 3.49 | TACGATTGGTTACT
 |  | Top2a | -62 | -48 | + | 6.6 | [NAME]
 |  | Zfp36l2 | -164 | -150 | - | 4.97 | [NAME]
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
5 | V$E2F_02 | E2F | 13.9361607198 | 0.625 | - 216 : 81 | 9.32098817709e-11
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | Kif18b | -113 | -105 | - | 4.08 | GCGCGCAA
 |  | Angptl2 | -212 | -204 | - | 4.08 | GTGCCAAA
 |  | Angptl2 | -182 | -174 | - | 7.7 | CCGCCAAA
 |  | Arhgap11a | -152 | -144 | + | 6.1 | TTTGCCGG
 |  | Arhgap11a | -60 | -52 | + | 10.07 | TTTGGCGC
 |  | Birc5 | -53 | -45 | + | 6.1 | TTTCCCGG
 |  | C330027C09Rik | -171 | -163 | - | 7.7 | CCGCCAAA
 |  | [NAME] | -18 | -10 | - | 4.08 | GCGCCAAT
 |  | Cdk1 | -153 | -145 | + | 4.08 | GTTGGCGC
 |  | Cdk1 | -105 | -97 | + | 10.07 | TTTCGCGC
 |  | Cdca5 | -146 | -138 | - | 4.08 | GCGCGGAA
 |  | Cdca5 | 74 | 82 | + | 4.26 | TTTCTCGC
 |  | Cspg4 | -118 | -110 | - | 4.08 | GCCCGAAA
 |  | Cspg4 | -98 | -90 | + | 4.08 | TCTGGCGC
 |  | Espl1 | -54 | -46 | + | 4.26 | TTTCTCGC
 |  | Espl1 | -10 | -2 | - | 4.08 | GCGCGGAA
 |  | Gen1 | -35 | -27 | + | 6.1 | TTTCCCGG
 |  | Hist1h2af | -79 | -71 | + | 10.07 | TTTCGCGC
 |  | Hist1h2af | 15 | 23 | - | 8.47 | GCGGCAAA
 |  | Hist1h2af | 39 | 47 | - | 4.08 | GCGCCAAG
 |  | Hist1h2an | -166 | -158 | - | 4.08 | GCGCCCAA
 |  | Hist1h2an | -82 | -74 | + | 10.07 | TTTCGCGC
 |  | Hist1h2an | 10 | 18 | - | 8.47 | GCGGCAAA
 |  | Hist1h2an | 34 | 42 | - | 4.08 | GCGCCAAG
 |  | Hist1h2ao | 18 | 26 | + | 4.77 | TTTTGCGC
 |  | Hist1h3f | -160 | -152 | + | 4.08 | TTTGGCCC
 |  | Hist1h4d | 14 | 22 | - | 8.47 | GCGGGAAA
 |  | Hist1h4d | 72 | 80 | - | 4.08 | GCGCGACA
 |  | Hist1h4m | 81 | 89 | - | 4.08 | GCGCCAAG
 |  | Hist2h2aa1 | -173 | -165 | + | 4.08 | ATTCGCGC
 |  | Hist2h2aa1 | 77 | 85 | - | 4.08 | GCGCCAAG
 |  | [NAME] | -216 | -208 | - | 4.08 | GCGCGAAC
 |  | Kif11 | -28 | -20 | - | 4.08 | GCGCGGAA
 |  | Kif15 | -27 | -19 | - | 10.07 | GCGCCAAA
 |  | Kif20a | -161 | -153 | + | 4.26 | TTTCACGC
 |  | Kif20b | -86 | -78 | - | 4.08 | GGGCGAAA
 |  | Ltbp2 | -74 | -66 | - | 4.08 | GTGCCAAA
 |  | Mki67 | -125 | -117 | - | 4.08 | GCGCCAGA
 |  | Mki67 | -68 | -60 | + | 4.08 | CTTGGCGC
 |  | Prrx1 | -216 | -208 | + | 4.08 | TTTCGGGC
 |  | Racgap1 | -111 | -103 | + | 4.08 | TTTCGGGC
 |  | Racgap1 | -71 | -63 | + | 4.77 | TTTTGCGC
 |  | Siah1b | 38 | 46 | - | 10.07 | GCGCGAAA
 |  | Siah1b | 60 | 68 | + | 4.08 | TTAGGCGC
 |  | Top2a | 68 | 76 | + | 8.47 | TTTCCCGC
 |  | Top2a | 80 | 88 | + | 4.26 | TTTGTCGC
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
6 | V$CREB_Q2 | CREB | 13.0955618848 | 0.555555568387 | - 137 : 66 | 1.92497443617e-07
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | [NAME] | 51 | 63 | + | 7.97 | GGTGACATCAGG
 |  | Angptl2 | -135 | -123 | + | 6.72 | TGTGACATCACC
 |  | Cdca5 | -32 | -20 | + | 6.31 | GATGACGCCACA
 |  | Cdca5 | 57 | 69 | - | 5.16 | GCCTGTGTCACT
 |  | Gsto1 | -79 | -67 | - | 7.57 | GTTAACGTCACA
 |  | Hist1h2ak | -108 | -96 | - | 4.58 | GCAGTCGTCATC
 |  | Hist1h2be | -82 | -70 | + | 7.73 | CGTGACGAAACA
 |  | Hist1h3a | -83 | -71 | - | 5.18 | TTAAACGTCACA
 |  | Hist1h4m | 29 | 41 | - | 4.81 | GTCTTCGTCATG
 |  | Hist2h2aa1 | -90 | -78 | - | 7.51 | CACGGCGTCAGG
 |  | [NAME] | 66 | 78 | - | 7.05 | CCAGGCGTCAGA
 |  | Kif11 | -124 | -112 | - | 7.21 | CCCGTCGTCACC
 |  | Kif11 | -110 | -98 | + | 6.17 | AGTGACGACACG
 |  | Kif15 | -88 | -76 | + | 8.56 | [NAME]
 |  | Kif15 | -70 | -58 | + | 7.34 | AGTGACGCCATC
 |  | Kif15 | 21 | 33 | + | 4.85 | CCTGGCGTAAGC
 |  | Kif2c | 13 | 25 | + | 7.1 | GGTGACGTTGTA
 |  | Lpp | 48 | 60 | + | 9.55 | [NAME]
 |  | [NAME] | -102 | -90 | + | 5.21 | GATGACACAAGT
 |  | Prrx1 | 43 | 55 | - | 5.86 | TAAAACGTCAGG
 |  | Ptn | -136 | -124 | + | 5.97 | GGTGACACCAGA
 |  | Shcbp1 | -51 | -39 | + | 5.3 | ACTGACGCTAGA
 |  | Shcbp1 | -39 | -27 | - | 5.85 | GATGTCGTCATC
 |  | Siah1b | -97 | -85 | + | 5.4 | CGTGACGTGACG
 |  | Zfp36l2 | -137 | -125 | + | 7.39 | CCTGACGTCCGC
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
7 | V$CREB_Q4 | CREB | 13.0218214916 | 0.562499997516 | - 137 : 66 | 3.69841485705e-07
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | [NAME] | 51 | 63 | + | 7.94 | GGTGACATCAGG
 |  | Angptl2 | -135 | -123 | + | 8 | TGTGACATCACC
 |  | Cdca5 | -32 | -20 | + | 6.77 | GATGACGCCACA
 |  | Cdca5 | 57 | 69 | - | 5.06 | GCCTGTGTCACT
 |  | Cep55 | -47 | -35 | + | 4.92 | AGTGACGTGACC
 |  | Gsto1 | -79 | -67 | - | 8.45 | GTTAACGTCACA
 |  | Hist1h2be | -82 | -70 | + | 7.62 | CGTGACGAAACA
 |  | Hist1h3a | -83 | -71 | - | 4.77 | TTAAACGTCACA
 |  | Hist2h2aa1 | -90 | -78 | - | 7.96 | CACGGCGTCAGG
 |  | [NAME] | 66 | 78 | - | 6.43 | CCAGGCGTCAGA
 |  | Kif11 | -124 | -112 | - | 7 | CCCGTCGTCACC
 |  | Kif11 | -110 | -98 | + | 7 | AGTGACGACACG
 |  | Kif15 | -88 | -76 | + | 8.35 | [NAME]
 |  | Kif15 | -70 | -58 | + | 8.98 | AGTGACGCCATC
 |  | Kif15 | 21 | 33 | + | 4.86 | CCTGGCGTAAGC
 |  | Kif2c | 13 | 25 | + | 7.54 | GGTGACGTTGTA
 |  | Lpp | 48 | 60 | + | 10.63 | [NAME]
 |  | Prrx1 | 43 | 55 | - | 5.58 | TAAAACGTCAGG
 |  | Ptn | -136 | -124 | + | 6.23 | GGTGACACCAGA
 |  | Shcbp1 | -51 | -39 | + | 6.07 | ACTGACGCTAGA
 |  | Shcbp1 | -39 | -27 | - | 6.29 | GATGTCGTCATC
 |  | Siah1b | -97 | -85 | + | 5.6 | CGTGACGTGACG
 |  | Zfp36l2 | -137 | -125 | + | 8.04 | CCTGACGTCCGC
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
8 | V$TATA_01 | TATA | 10.0863285279 | 0.376692369239 | - 162 : 54 | 1.64443103754e-06
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | [NAME] | -76 | -61 | + | 6.63 | CCATAAAAATAGGTC
 |  | [NAME] | -56 | -41 | + | 6.13 | CCATAAAACGGAGAA
 |  | [NAME] | -26 | -11 | - | 6.43 | CGGTTACATATATAT
 |  | Cenpf | -162 | -147 | - | 6.94 | TGCTTGTTTTTAAAC
 |  | Ckap2l | -51 | -36 | - | 7.07 | TCCGTCTTTTTATTG
 |  | Gsto1 | -35 | -20 | - | 5.5 | GCTTTCCCTTTAAAG
 |  | Hist1h2ak | -152 | -137 | - | 7.89 | GGCTGCCTTTTAAAC
 |  | Hist1h2ak | 15 | 30 | + | 7.32 | CTATAAATACTGTCA
 |  | Hist1h2ak | 54 | 69 | - | 5.58 | AGCAGGCTTATATTC
 |  | Hist1h2an | -64 | -49 | + | 8.24 | CTATAAAGGCCAAGC
 |  | Hist1h2bc | -29 | -14 | + | 5.81 | CTATAAGTAGGAGAA
 |  | Hist1h3a | -32 | -17 | + | 7.28 | CTATAAATAGTAGTT
 |  | Hist1h3f | 54 | 69 | - | 5.45 | CATCTCCTTAAATAT
 |  | Hist1h4b | 20 | 35 | + | 5.75 | CTATAATAACACAGC
 |  | Hist1h4d | -157 | -142 | - | 5.58 | TCAGCCTTTTCATAG
 |  | Hist1h4d | -63 | -48 | + | 8.5 | TTATAAAAGCCAGGA
 |  | Hist1h4f | -59 | -44 | - | 7.08 | ATTCGCCATATATAT
 |  | Hist1h4m | -131 | -116 | + | 5.63 | CCATATAAAAACCTA
 |  | Hist1h4m | -33 | -18 | + | 7.83 | CTATAAGAGGGGCCG
 |  | Hist2h2aa1 | -31 | -16 | + | 8.44 | CTATAAAAGAGTGAG
 |  | Iqgap3 | -109 | -94 | + | 5.82 | CTACAAAACCCAGGG
 |  | Kif15 | -147 | -132 | + | 6.18 | CAATAAATAGCACTC
 |  | Kif20a | -111 | -96 | + | 10.69 | CTATAAAAGGGGGGC
 |  | Kif2c | 36 | 51 | - | 6.55 | GCGCGGGATTTAAAC
 |  | Ltbp2 | 8 | 23 | + | 6.62 | GGATAAAAGAGGCGA
 |  | Top2a | -117 | -102 | + | 5.94 | GAATAAAAGACGATC
 |  | Zfp36l2 | -29 | -14 | + | 8.49 | GTATAAAGGGCGCAC
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
9 | [NAME] | CHOP-C/EBPalpha | 12.3672766563 | 0.506903354652 | -470:-440 | 1.20316925804e-05
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | Gsto1 | -440 | -427 | - | 5.85 | AGGGATGGCAGCT
 |  | Hist1h2an | -448 | -435 | + | 5.34 | [NAME]
 |  | Hist1h3g | -470 | -457 | - | 5.15 | GCTCATTTCACCG
 |  | Hist1h4b | -457 | -444 | - | 5.56 | GCCAAGTGCATCT
 |  | Hist1h4m | -451 | -438 | + | 6.36 | ATGTGCCATCACC
 |  | Hist2h2aa1 | -453 | -440 | - | 6.15 | GGTGGTTTCATAC
 |  | [NAME] | -444 | -431 | - | 5.2 | GGTCACTGCACAT
 |  | Kif20b | -468 | -455 | - | 5.58 | ACGTGTTTCATCC
 |  | [NAME] | -461 | -448 | - | 6.68 | GGCTATTTCAGAC
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
10 | V$ATF_01 | ATF | 12.6123019838 | 0.56285715084 | - 138 : 87 | 1.23662456687e-05
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | Birc5 | 87 | 101 | + | 6.19 | TGGTGACGCCATCA
 |  | Cep55 | -48 | -34 | + | 9.13 | CAGTGACGTGACCC
 |  | Gsto1 | -80 | -66 | - | 8.82 | GGTTAACGTCACAC
 |  | Hist1h2ak | -109 | -95 | - | 6.11 | [NAME]
 |  | Hist1h2be | -83 | -69 | + | 5.97 | TCGTGACGAAACAC
 |  | Hist1h3a | -84 | -70 | - | 7.34 | CTTAAACGTCACAG
 |  | Hist1h4m | 28 | 42 | - | 5.1 | TGTCTTCGTCATGT
 |  | Hist2h2aa1 | -91 | -77 | - | 5.55 | CCACGGCGTCAGGA
 |  | [NAME] | 65 | 79 | - | 6.42 | CCCAGGCGTCAGAA
 |  | Kif11 | -125 | -111 | - | 6.85 | CCCCGTCGTCACCA
 |  | Kif11 | -111 | -97 | + | 6.98 | CAGTGACGACACGG
 |  | Kif15 | -89 | -75 | + | 9.81 | TTCTGACGTAGACC
 |  | Kif15 | -71 | -57 | + | 6.67 | TAGTGACGCCATCC
 |  | Kif20b | 86 | 100 | + | 6.67 | AGCTGACGATTTTG
 |  | Kif2c | 12 | 26 | + | 5.66 | TGGTGACGTTGTAG
 |  | Lpp | 47 | 61 | + | 11.5 | CCCTGACGTCAGCC
 |  | Prrx1 | 42 | 56 | - | 5.78 | GTAAAACGTCAGGC
 |  | Shcbp1 | -40 | -26 | - | 7.82 | AGATGTCGTCATCG
 |  | Siah1b | -98 | -84 | + | 7.24 | ACGTGACGTGACGT
 |  | Zfp36l2 | -138 | -124 | + | 6.48 | GCCTGACGTCCGCG
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
11 | V$MEIS1B/HOXA9_01 | MEIS1B/HOXA9 | 17.9299161883 | 0.367346934518 | -435:-234 | 2.19357124811e-05
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | Arhgap11a | -248 | -234 | + | 5.62 | TGACATTTTTCTTC
 |  | Bub1 | -286 | -272 | - | 4.6 | GTGTAATACTGTAA
 |  | Ccna2 | -344 | -330 | + | 5.29 | GGACAGCATTATGA
 |  | Ccna2 | -236 | -222 | + | 2.42 | TGGCAGCATCACAG
 |  | [NAME] | -336 | -322 | + | 2.24 | [NAME]
 |  | Cdk1 | -322 | -308 | - | 2.85 | TAGTGGTACTGTCA
 |  | Cenpf | -381 | -367 | - | 1.79 | [NAME]
 |  | Ckap2l | -269 | -255 | - | 5.85 | TTCTTCAACTGTCA
 |  | Hist1h4d | -385 | -371 | - | 2.62 | CTGCTTAACTGTAA
 |  | Hist1h4d | -368 | -354 | + | 2.59 | TGATACTGTTATGA
 |  | Hist1h4f | -386 | -372 | + | 2.56 | TTACATTTTCGTAA
 |  | Hist1h4m | -343 | -329 | - | 5.16 | CTGTAAAAGCGACA
 |  | [NAME] | -261 | -247 | + | 2.56 | TGACGCCAAAATTC
 |  | Incenp | -307 | -293 | - | 3.53 | TAGCAGAGCTGTCA
 |  | Iqgap3 | -234 | -220 | + | 5 | GGACAGGTTAGTGA
 |  | Kif20a | -411 | -397 | - | 2.13 | CAGCTAACATATCA
 |  | Kif2c | -434 | -420 | - | 3.16 | TTGTATACATTTCA
 |  | Nuf2 | -433 | -419 | - | 4.06 | CCCTCAAGCTTTCA
 |  | Nuf2 | -347 | -333 | - | 1.77 | CAGTAAGACTGTTA
 |  | Ptn | -407 | -393 | - | 4.4 | TAATCAAAATGTTA
 |  | Ptn | -365 | -351 | + | 4.22 | TGACATCATGAGAC
 |  | Ptn | -313 | -299 | - | 5.09 | TAATTAATCTGGCA
 |  | Racgap1 | -239 | -225 | - | 3.04 | TAGTCAACAGGTCA
 |  | Shcbp1 | -435 | -421 | + | 2.56 | TGAAGCATTTATTA
 |  | Shcbp1 | -281 | -267 | - | 3.37 | CAATCAAGATGGCA
 |  | Siah1b | -395 | -381 | - | 8.16 | AAATAAAAGTGTCA
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
12 | V$CEBP_01 | C/EBP | 6.98613091071 | 0.402097910643 | -200:-117 | 2.57306179448e-05
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | [NAME] | -150 | -137 | + | 6.07 | CCTTTGCTAAGAT
 |  | Cep55 | -123 | -110 | - | 5.88 | GCCTTTCCTCAGA
 |  | Gsto1 | -134 | -121 | + | 6.34 | TCTGTGGTTTTGT
 |  | Hist1h2af | -167 | -154 | - | 6.99 | AACTATCCAATCA
 |  | Hist1h2an | -200 | -187 | + | 6.05 | TGATTGGTTAAAA
 |  | Hist1h2ao | -145 | -132 | + | 6.16 | TATTTGATGAGGT
 |  | Hist1h2bc | -177 | -164 | + | 5.87 | TGATTGGTTACAA
 |  | Hist1h2bc | -118 | -105 | + | 5.8 | CATTTGCATAATC
 |  | Hist1h3g | -181 | -168 | - | 6.6 | AGTTAACCAATCA
 |  | Hist1h4m | -137 | -124 | - | 6.68 | TCCTTTCCATATA
 |  | [NAME] | -174 | -161 | + | 5.89 | TGATTGGATAGAG
 |  | Iqgap3 | -198 | -185 | + | 6.21 | TATTTGTTAAAAA
 |  | Kif11 | -120 | -107 | - | 5.89 | TCGTCACCACAGT
 |  | Kif2c | -134 | -121 | - | 5.99 | AACAAAACAAACA
 |  | Kif2c | -117 | -104 | - | 6.81 | AAAAAACCAAACA
 |  | Shcbp1 | -192 | -179 | - | 6.31 | AGCATTCCAAATT
 |  | Top2a | -151 | -138 | + | 6.18 | [NAME]
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
13 | V$VJUN_01 | [NAME] | 20.5104214481 | 0.479166672565 | -142:-34 | 3.41423870495e-05
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | Angptl2 | -137 | -121 | - | 6.03 | AGTGTGACATCACCAG
 |  | Aurkb | -78 | -62 | + | 2.02 | TCAATGACTACATCAC
 |  | Cdca5 | -132 | -116 | - | -0.66 | GGACTGAGCTCACCAA
 |  | Cdca5 | -34 | -18 | + | 6.56 | CTGATGACGCCACAGC
 |  | Cep55 | -49 | -33 | + | 0.42 | GCAGTGACGTGACCCG
 |  | Gsto1 | -81 | -65 | + | 0.26 | CGGTTAACGTCACACA
 |  | Hist1h2ao | -142 | -126 | + | 2.32 | TTGATGAGGTCTTATT
 |  | Hist1h2ao | -83 | -67 | - | 1.02 | TACATGGCGACATCCG
 |  | Kif11 | -112 | -96 | + | 3.86 | ACAGTGACGACACGGC
 |  | Kif15 | -72 | -56 | + | 2.42 | TTAGTGACGCCATCCG
 |  | Shcbp1 | -41 | -25 | + | 7.52 | GAGATGTCGTCATCGC
 |  | Siah1b | -94 | -78 | - | 3.31 | GACGTGACGTGACCCA
 |  | Siah1b | -62 | -46 | + | 1.19 | ATGGTAACGGCATCAC
 |  | Zfp36l2 | -139 | -123 | - | 1.24 | AGCCTGACGTCCGCGG
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
14 | V$BARBIE_01 | [NAME] | 12.6996606365 | 0.435555556085 | -181:-151 | 6.14518078386e-05
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | [NAME] | -156 | -141 | - | 6.22 | CCCCCTCCTTTGCTA
 |  | Angptl2 | -181 | -166 | + | 7.16 | CGCCAAAGCAGGCAG
 |  | Arhgap11a | -160 | -145 | - | 5.18 | CTTTCGGCTTTGCCG
 |  | Aurkb | -158 | -143 | + | 7.8 | [NAME]
 |  | Bub1 | -151 | -136 | + | 5.47 | ACTAAAAGGCAAATG
 |  | Cspg4 | -157 | -142 | + | 7 | TAAGAAAGTTGGAGG
 |  | Hist1h3a | -177 | -162 | - | 5.37 | CCATTTACTTTAAAA
 |  | Hist1h4d | -159 | -144 | - | 9.13 | CCTCAGCCTTTTCAT
 |  | Kif20a | -169 | -154 | - | 6.04 | CCCACGCCTTTCACG
 |  | Ptn | -170 | -155 | + | 6.96 | AAAGAAAGCTTATGA
 |  | Shcbp1 | -168 | -153 | - | 7.74 | CAACTTCCTTTTGTT
 |  | Top2a | -166 | -151 | - | 6.06 | CCGCCTTCTTTTACC
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
15 | [NAME] | IRF-2 | 21.5088732994 | 0.394871796553 | -390:-310 | 8.45290921956e-05
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | Arhgap11a | -390 | -377 | - | 0.78 | AGAATCGGTTTTC
 |  | Arhgap11a | -365 | -352 | - | -0.4 | CCTTTAGCTTTAG
 |  | Arhgap11a | -350 | -337 | + | 2.48 | GAGAAATGAAAGG
 |  | Cdk1 | -379 | -366 | + | 0.92 | GAAAGCTGAGACT
 |  | Cdk1 | -315 | -302 | - | 0.64 | ACTGTCACTTTGG
 |  | Cenpf | -358 | -345 | - | 2.27 | CCTTACGCTTGTC
 |  | Cspg4 | -322 | -309 | - | 3.78 | GCTCTCACTTTTA
 |  | Hist1h2af | -383 | -370 | - | -0.83 | GTTTTCCCTTTTA
 |  | Hist1h3f | -389 | -376 | + | 1.1 | CTAAAGTCAAAGC
 |  | Hist1h4b | -323 | -310 | - | 1.73 | TCTTTCACATTTG
 |  | Hist1h4f | -325 | -312 | + | -0.27 | GATAAGTGTATGG
 |  | Hist1h4m | -313 | -300 | - | 0.64 | ACTATAACTTTTG
 |  | Kif20a | -336 | -323 | - | 0.57 | CCTTTCCGTTTTA
 |  | Mki67 | -310 | -297 | - | 3.78 | GGTTCCGCTTCTC
 |  | [NAME] | -367 | -354 | + | -2.01 | GACAAATGTAACC
 |  | [NAME] | -313 | -300 | - | 0.78 | ACATTTAGTTTTC
 |  | Shcbp1 | -342 | -329 | + | -0.12 | GAAATCTTAAAGG
 |  | Siah1b | -319 | -306 | - | -1.95 | ACTTTGGGGTATC
rank | matrix name | transcription factor name | matrix information content | matrix [NAME] (G+C)% | location of identified binding sites (relative to TSS) | p-value
16 | V$GATA1_01 | GATA-1 | 6.16102405104 | 0.538098700176 | -82:-10 | 9.00303191863e-05
 |  | list of hits:
 |  | gene name | position start | position end | strand | matrix similarity | motif instance
 |  | Kif18b | -54 | -44 | - | 5.49 | GCCAATCAGC
 |  | Birc5 | -75 | -65 | + | 5.54 | GCAGATGGGC
 |  | C330027C09Rik | -82 | -72 | - | 5.65 | GCCAATCACC
 |  | Espl1 | -48 | -38 | + | 5.79 | GCTGATTGGT
 |  | Gsto1 | -67 | -57 | - | 5.83 | CAGCATCAGG
 |  | Hist1h3a | -10 | 0 | - | 6 | CACCATCTCC
 |  | [NAME] | -42 | -32 | + | 5.94 | CCAGATAGGT
 |  | Incenp | -30 | -20 | + | 6.05 | CGTGATTGGT
 |  | Kif20a | -73 | -63 | - | 5.5 | CGCCATCTTG
 |  | [NAME] | -10 | 0 | + | 5.54 | GCAGATGGGC
 |  | Siah1b | -55 | -45 | - | 5.89 | CGGCATCACC
 |  | Spag5 | -53 | -43 | + | 5.94 | CCAGATGGGT
 |  | Top2a | -62 | -52 | + | 5.95 | GGTGATTGGT