黑痣菌科
下级分类

本科包括以下属：
Acerviclypeatus R.T.Hanlin, 1990
Anisochora
Apiosphaeria F.von Höhnel, 1909
Apodothina Petrak, 1970
Bagnisiopsis Theiss. & Syd.
Brobdingnagia K.D.Hyde & P.F.Cannon, 1999
Camarotella Theiss. & Syd.
Catacauma
Chaetomelasmia
Clypeotrabutia
Coccodiella K.Hara, 1910
Coccostroma
Coccostromopsis Plunkett, 1924
Deshpandiella Kamat & Ullasa, 1973
Diachora J.Müller-Arg., 1893
Diachorella F.von Höhnel, 1918
Diatractium
Discomycopsella
Dothidina
Endodothella Theiss. & Syd., 1915
Erikssonia Penzig & P.A.Saccardo, 1898
Fremitomyces P.F.Cannon & H.C.Evans, 1999
Geminispora Patouillard, 1893
Gibellina Pass.
Helochora M.A.Sherwood, 1979
Imazekia Tak.Kobayashi & Y.Kawabe, 1992
Isothea Fr.
Lichenochora Hafellner
Lindauella Rehm, 1900
Linochora Höhn.
Lohwagia Petrak, 1942
Maculatifrondes K.D.Hyde, 1996
Malthomyces K.D.Hyde & P.F.Cannon, 1999
Marinosphaera K.D.Hyde, 1989
Martinella (M.C.Cooke & Massee ex M.C.Cooke) P.A.Saccardo, 1892
Muelleromyces M.N.Kamat & K.H.Anahosur, 1968
Munkiodothis
Mycohypallage B.C.Sutton, 1963
Neoflageoletia
新黑痣菌属 Neophyllachora Dayar. & K.D.Hyde, 2017
Neophyllachora cerradensis (M.D.M.Santos, R.B.Medeiros & Dianese) Dayar. & K.D.Hyde
榕新黑痣菌 Neophyllachora fici Tennakoon, C.H.Kuo & K.D.Hyde
Neophyllachora myrciae (Lév.) Dayar. & K.D.Hyde
Neophyllachora myrciariae (M.D.M.Santos & Dianese) Dayar., Maharachch. & K.D.Hyde
Neophyllachora religiosa Literatus, Haituk & Cheew., 2023
Neophyllachora subcircinans (Speg.) Dayar., Maharachch. & K.D.Hyde
Ophiodothella (Henn.) Höhn.
Orphnodactylis Malloch & Mallik
Oswaldina E.Rangel, 1921
Oxodeora K.D.Hyde & P.F.Cannon, 1999
Parberya C.A.Pearce & K.D.Hyde, 2001
Periaster Theiss. & Syd. 1917
Petrakiella H.Sydow, 1924
Phaeochorella Theissen & H.Sydow, 1915
Phaeotrabutia Garcés 1941
Phragmocarpella Theiss. & Syd. 1915
Phragmocauma Theiss. & Syd. 1915
Phycomelaina Kohlm., 1968
黑痣菌属 Phyllachora Nitschke ex Fuckel, 1870
Phylleutypa Petr.
Phyllocrea F.von Höhnel, 1918
Physalosporina
Placostroma Theissen & Sydow, 1914
Plectosphaera Theiss.
Polylagenochromatia Sousa da Câmara 1928
Polystigma A.P.de Candolle ex Chevallier, 1826
Polystigma adenostomatis Farl.
Polystigma amygdalinum P.F.Cannon
Polystigma apophlaeae Kohlm.
Polystigma bumeliae (Schwein.) Sacc.
Polystigma caraganae (Woron.) Vasyag.
Polystigma caulicola E.Müll.
杏疗座霉菌 Polystigma deformans Syd., 1936
Polystigma eugeniae Anahosur
Polystigma fulvum Pers. ex DC., 2019
Polystigma haraeanum Sacc.
Polystigma indicum (Chona, Munjal & J.N.Kapoor) Munjal & J.N.Kapoor
Polystigma mahatbaleshwarense (Ananthan.) Ullasa
Polystigma melastomatum Pat.
Polystigma orbiculatum (Syd. & P.Syd.) Arx & E.Müll.
Polystigma phyllodii (Cooke & Massee) Arx & E.Müll.
Polystigma rubrum (Pers.) DC.
Polystigma sonneratiae Petr.
Polystigma uniloculare I.Hino & Katum.
Polystigma volkartianum (Rehm) Arx & E.Müll.
Polystigma xanthostroma (Penz. & Sacc.) Gola
Polystigma DC., 1815
Polystigmina Sacc.
Pseudothiella Petrak, 1928
Pseudothiopsella Petrak, 1928
Pterosporidium W.H.Ho & K.D.Hyde, 1996
Puiggarina
Rehmiodothis Theissen & H.Sydow, 1914
Retroa P.F.Cannon, 1991
Rhodosticta Woronichin, 1911
Rhopographina
Rikatlia P.F.Cannon, 1993
Schizochora H.Sydow & P.Sydow, 1913
Scolecoccoidea
Scolecodothis
Sphaerodothella C.A.Pearce & K.D.Hyde, 2001
Sphaerodothis (P.A.Saccardo & P.Sydow) Shear, 1909
Stigmatula (Sacc.) Syd. & P.Syd.
Stigmochora Theissen & H.Sydow, 1914
Stromaster F.von Höhnel, 1930
Telemeniella
Telimena Racib.
Telimenella Petr.
Telimenochora A.Sivanesan, 1987
Thamnogala
Tolediella
Trabutia Sacc. & Roum.
Trabutiella
Tribulatia Joanne E.Taylor, K.D.Hyde & E.B.G.Jones, 2003
Uropolystigma Maublanc, 1920
Vitreostroma P.F.Cannon, 1991
Woronichina
Xanthopsora
Zimmermanniella P.Hennings, 1902
Zimmermanniella trispora Henn.