虫囊菌科
下属分类

本科包括以下属：
Acallomyces Thaxter
无雅菌属 Acompsomyces Thaxter
Acrogynomyces Thaxter, 1931
无形菌属 Amorphomyces Thaxter, 1893
Amphimyces Thaxter
Apatelomyces Thaxter, 1931
Apatomyces Thaxter, 1931
Aphanandromyces W.Rossi
无孔菌属 Aporomyces Thaxter, 1931
Appendiculina Berl.
Arthrorhynchus Kolen.
Arthrorhynchus acrandros Merola
Arthrorhynchus cyclopodiae Thaxt.
Arthrorhynchus eucampsipodae Thaxt.
Arthrorhynchus nycteribiae (Peyr.) Thaxt.
Asaphomyces Thaxter
Autophagomyces Thaxter
Balazucia R.K.Benjamin, 1968
Benjaminiomyces I.I.Tavares, 2000
顶囊菌属 Blasticomyces I.I.Tavares, 1985
Bordea
葡雄菌属 Botryandromyces I.I.Tav. & T.Majewski
Camptomyces Thaxter
间雄菌属 Cantharomyces Thaxter
Capillistichus S.Santamaría, 2004
Carpophoromyces Thaxter, 1931
Ceraiomyces
Cesariella W.Rossi & S.Santamaria, 2008
牙甲菌属 Chaetarthriomyces Thaxter
Chaetomyces Thaxter, 1893
甲壳菌属 Chitonomyces Peyr.
Clematomyces Thaxter, 1900
Clonophoromyces Thaxter, 1931
Columnomyces R.K.Benjamin, 1955
Compsomyces Thaxter
翅托菌属 Coreomyces Thaxter
Coreomycetopsis Thaxter, 1920
帚菌属 Corethromyces Thaxter
Corylophomyces R.K.Benjamin, 1994
隐雄菌属 Cryptandromyces Thaxter
Cucujomyces Spegazzini, 1917
Cupulomyces R.K.Benjamin, 1992
Dermapteromyces Thaxter, 1931
Diandromyces Thaxter, 1918
Diaphoromyces Thaxter, 1926
Dichomyces Thaxter
Diclonomyces Thaxter, 1931
排壳菌属 Dimeromyces Thaxter
Dimorphomyces Thaxter
Dioicomyces Thaxter
Diphymyces I.I.Tav.
Diplomyces Thaxter
Diplopodomyces W.Rossi & Balazuc, 1977
Dipodomyces Thaxter, 1931
Distichomyces
Distolomyces Thaxter
叉菌属 Dixomyces I.I.Tavares, 1985
Ecteinomyces Thaxter
同株菌属 Enarthromyces Thaxter, 1896
复雄菌属 Eucantharomyces Thaxter, 1895
Eudimeromyces
Euhaplomyces Thaxter
Eumisgomyces
真单体菌属 Eumonoicomyces Thaxter, 1901
Euphoriomyces Thaxter
Fanniomyces T.Majewski, 1972
丝菌属 Filariomyces Shanor, 1952
Gloeandromyces Thaxter, 1931
单菌属 Haplomyces Thaxter
Hesperomyces Thaxter
Histeridomyces Thaxter, 1931
Homaromyces R.K.Benjamin, 1955
沼梭菌属 Hydraeomyces Thaxter
Hydrophilomyces Thaxter
Idiomyces Thaxter
Ilyomyces F.Picard, 1917
Ilytheomyces Thaxter, 1917
Jeaneliomyces
新菌属 Kainomyces Thaxter, 1901
Kleidiomyces Thaxter, 1908
Kruphaiomyces Thaxter, 1931
Kyphomyces I.I.Tavares, 1985
虫囊菌属 Laboulbenia Mont. & C.P.Robin, 1853
Laboulbeniella
Limnaiomyces Thaxter, 1900
Majewskia Y.-B.Lee & K.Sugiyama, 1986
Meionomyces Thaxter, 1931
Microsomyces Thaxter, 1931
Mimeomyces Thaxter, 1912
顶枝菌属 Misgomyces Thaxter
Monandromyces R.K.Benjamin, 1999
单体菌属 Monoicomyces Thaxter
Nanomyces Thaxter, 1931
Neohaplomyces R.K.Benjamin, 1955
Nycteromyces Thaxter, 1917
链菌属 Ormomyces I.I.Tavares, 1985
隐翅甲菌属 Osoriomyces K.Terada, 1981
Parahydraeomyces
Parvomyces S.Santamaria, 1995
Peyerimhoffiella Maire, 1916
多精菌属 Peyritschiella Thaxter
Phalacrichomyces R.K.Benjamin, 1992
Phaulomyces Thaxter
Picardella I.I.Tavares, 1985
多雄菌属 Polyandromyces Thaxter, 1920
Polyascomyces Thaxter
具孔菌属 Porophoromyces Thaxter, 1926
Prolixandromyces R.K.Benj., 1970
Pselaphidomyces Spegazzini, 1917
刺菌属 Rhachomyces Thaxter
Rhadinomyces Thaxter
Rheophila
Rhipidiomyces Thaxter, 1926
Rhizomyces Thaxter, 1896
Rhizopodomyces Thaxter, 1931
虫生菌属 Rickia Cavara
Rossiomyces R.K.Benj.
Sandersoniomyces R.K.Benjamin, 1968
Scalenomyces I.I.Tavares, 1985
Scaphidiomyces Thaxter, 1912
Scelophoromyces Thaxter, 1912
Scepastocarpus S.Santamaría, 2004
Schizolaboulbenia
Siemaszkoa I.I.Tav. & T.Majewski
Smeringomyces Thaxter, 1908
Sphaleromyces Thaxter
Spongiophaga Carter, 1878
Stemmatomyces Thaxter, 1931
Stichomyces Thaxter
点菌属 Stigmatomyces H.Karst.
Sugiyamaemyces I.I.Tavares & J.Balazuc, 1989
Symplectromyces Thaxter
Sympodomyces R.K.Benjamin, 1973
聚雄菌属 Synandromyces Thaxter, 1912
Tavaresiella T.Majewski, 1980
怪菌属 Teratomyces Thaxter
Tetrandromyces Thaxter, 1912
Thaxterimyces
Trenomyces Chatton & F.Picard
Triainomyces W.Rossi & A.Weir, 1998
Triceromyces T.Majewski, 1980
Trochoideomyces Thaxter, 1931
Troglomyces S.Colla
对雄菌属 Zeugandromyces Thaxter, 1912
大托菌属 Zodiomyces Thaxter