圆孔壳科
下级分类

本科包括以下属：
Amphibambusa D.Q. Dai & K.D. Hyde 2015
Amphibambusa bambusicola D.Q.Dai & K.D.Hyde
红河竹圆孔壳 Amphibambusa hongheensis H.B.Jiang & Phookamsak, 2021
Amphisphaerella (Sacc.) Kirschst.
Amphisphaerella alpigena (Fuckel) Lar.N.Vassiljeva
Amphisphaerella amphisphaerioides (Sacc. & Speg.) Kirschst.
Amphisphaerella arausiaca (Fabre) Kirschst.
Amphisphaerella canicollis (P.Karst.) Kirschst.
Amphisphaerella deceptiva M.E.Barr
Amphisphaerella dispersella (Nyl.) O.E.Erikss.
Amphisphaerella erikssonii Math.
Amphisphaerella lonicericola (Z.Q.Yuan & Z.Y.Zhao) Lar.N.Vassiljeva
Amphisphaerella mycophila (Fr.) Kirschst.
Amphisphaerella vaga (Niessl) O.E.Erikss.
Amphisphaerella whitmanensis J.D.Rogers
Amphisphaerella xylostei (Pers.) Munk
圆孔壳菌属 Amphisphaeria Cesati & de Notaris, 1863
Beltraniella
Bleptosporium R.L.Steyaert, 1961
Blogiascospora Shoemaker, E.Müll. & Morgan-Jones
Cainia Arx & E.Müll.
Capsulospora K.D.Hyde, 1996
Capsulospora angustispora J.Fröhl. & K.D.Hyde
Capsulospora australiensis J.Fröhl. & K.D.Hyde
Capsulospora bipolaris J.Fröhl. & K.D.Hyde
Capsulospora borneoensis J.Fröhl. & K.D.Hyde
Capsulospora brunneispora K.D.Hyde
Capsulospora calamicola K.D.Hyde
Capsulospora frondicola K.D.Hyde
Capsulospora pacifica Whitton, K.D.Hyde & McKenzie
Capsulospora trachycarpa Joanne E.Taylor, K.D.Hyde & E.B.G.Jones
Ceratosporium Schwein. 1832
Ceratosporium aequatoriale Matsush.
Ceratosporium caribense Hol.-Jech.
Ceratosporium cornutum Matsush.
Ceratosporium fuscescens Schwein.
Ceratosporium gracile Matsush.
Ceratosporium hainanense Jian Ma & X.G.Zhang
Ceratosporium indicum V.G.Rao & D.Rao
Ceratosporium multiseptatum Goid.
Ceratosporium palmiforme Matsush.
Ceratosporium productum Petch
Ceratosporium rilstonei S.Hughes
Ceratosporium strepsiceras (Ces.) Sacc.
Ceratosporium verrucosum R.Kirschner & Chee J.Chen
Ceriophora Höhn.
Ceriospora Niessl
Chitonospora E.Bommer, M.Rousseau & Sacc.
Clethridium (Sacc.) Sacc.
Clypeophysalospora H.J.Swart, 1981
双毛壳孢属 Discosia Lib. ex Durieu & Mont.
Distorimula
Doliomyces R.L.Steyaert, 1961
Dyrithium M.E.Barr
Ellisiopsis
Ellurema T.R.Nag Raj & W.B.Kendrick, 1986
Flagellosphaeria
Frondispora K.D.Hyde
Funiliomyces A.Aptroot, 2004
Griphosphaerella
Griphosphaerioma F.von Höhnel, 1918
Hyalotiopsis Punithalingam, 1970
Hymenopleella Munk
龙舌兰小腹壳菌 Hymenopleella agaves Senan. & K.D.Hyde
Hymenopleella austroafricana F.Liu, L.Cai & Crous
Hymenopleella endophytica (Hyang B.Lee, P.M.Kirk, K.D.Hyde, Maharachch. & T.T.T.Nguyen) F.Liu, L.Cai & Crous
Hymenopleella hippophaicola Jaklitsch & Voglmayr
Hymenopleella hippophaëicola Jaklitsch & Voglmayr
Hymenopleella lakefuxianensis (L.Cai, Jeewon & K.D.Hyde) F.Liu, L.Cai & Crous
Hymenopleella polyseptata F.Liu, L.Cai & Crous
Hymenopleella schefflerae (V.P.Abreu, A.W.C.Rosado & O.L.Pereira) Samarak., Maharachch. & K.D.Hyde
Hymenopleella subcylindrica F.Liu, L.Cai & Crous
Idriellomyces Crous, 2018
Immersidiscosia Kaz.Tanaka, Okane & Hosoya
Iodosphaeria Samuels, E.Müll. & Petrini
Kellermanniopsis J.C.Edward, K.P.Singh, S.C.Tripathi, M.K.Sinha & Ranade, 1974
Labridella Brenckle, 1929
Leiosphaerella Höhn.
Lepteutypa Petr.
Macrothelia
Manokwaria
Massariella Spegazzini, 1880
Massariopsis Niessl
微结节菌属 Microdochium Syd. & P. Syd.
Microdochium albescens (Thüm.) Hern.-Restr. & Crous
Microdochium bolleyi (R.Sprague) de Hoog & Herm.-Nijh.
Microdochium caespitosum B.Sutton, Piroz. & Deighton
Microdochium chrysanthemoides Z.F.Zhang, F.Liu & L.Cai
楚雄微结节菌 Microdochium chuxiongense Hong Yu bis, W.Q.Zou & D.X.Tang
Microdochium citrinidiscum Hern.-Restr. & Crous
Microdochium colombiense Hern.-Restr. & Crous
Microdochium consociatum (Rehm) Hern.-Restr. & Crous
Microdochium cylindricum B.Sutton & Hodges
Microdochium dawsoniorum C.Lock, Vitelli, Holdom, Y.P.Tan & R.G.Shivas
Microdochium fisheri Hern.-Restr. & Crous
Microdochium fusariisporum (Ellis & Everh.) Hern.-Restr. & Crous
Microdochium griseum B.Sutton, Piroz. & Deighton
Microdochium hainanense
Microdochium indocalami S.T.Huang, J.W.Xia, X.G.Zhang, W.X.Sun & Z.Li
Microdochium intermedium (Matsush.) de Hoog & Herm.-Nijh.
Microdochium linariae Săvul.
Microdochium lycopodinum (Jaklitsch, Siepe & Voglmayr) Hern.-Restr. & Crous
Microdochium maculosum A.P.de Souza, B.W.Ferreira, R.W.Barreto & B.S.Vieira
Microdochium majus (Wollenw.) Glynn & S.G.Edwards
Microdochium maydis (E.Müll. & Samuels) Hern.-Restr. & Crous
Microdochium miscanthi
Microdochium musae Crous
新昆士兰微结节菌 Microdochium neoqueenslandicum Hern.-Restr. & Crous
Microdochium nivale (Fr.) Samuels & I.C.Hallett
新西兰微结节菌 Microdochium novae-zelandiae Hern.-Restr., Thangavel & Crous
Microdochium opuntiae (Ellis & Everh.) Hern.-Restr. & Crous
Microdochium palmicola Hol.-Jech. & Mercado
Microdochium panattonianum (Berl.) B.Sutton, Galea & T.V.Price
Microdochium paspali Wu Zhang bis, Nan & Mei J.Hu
Microdochium passiflorae Samuels, E.Müll. & Petrini
Microdochium phragmitis Syd. & P.Syd.
Microdochium phyllanthi B.Sutton, Piroz. & Deighton
Microdochium poae J.M.Liang & Lei Cai
Microdochium punctum (Davis) U.Braun
昆士兰微结节菌 Microdochium queenslandicum Matsush.
Microdochium ratticaudae Steinrucken, Vitelli, Holdom, Y.P.Tan & R.G.Shivas
Microdochium rhopalostylidis Crous & R.Thangavel
Microdochium salmonicolor Kallol Das, S.Y.Lee & H.Y.Jung
Microdochium sclerotiorum Mouch. & Samson
Microdochium seminicola Hern.-Restr., Seifert, R.M.Clear & B.Dorn
四川微结节菌 Microdochium sichuanense L.S.Dissan., J.C.Kang & Maharachch., 2023
中华微结节菌 Microdochium sinense
史蒂文森微结节菌 Microdochium stevensonii (Petr.) Hern.-Restr. & Crous
Microdochium stoveri (C.Booth) Samuels & I.C.Hallett
台南微结节菌 Microdochium tainanense (Ts.Watan.) de Hoog & Herm.-Nijh.
Microdochium trichocladiopsis Hern.-Restr. & Crous
Microdochium triticicola Kwaśna & G.L.Bateman
云南微结节菌 Microdochium yunnanense S.T.Huang, J.W.Xia, X.G.Zhang, W.X.Sun & Z.Li
单毛孢属 Monochaetia (Sacc.) Allesch.
Monochaetinula J.Muthumary, S.Q.Abbas & B.C.Sutton, 1986
Monochaetiopsis L.Cai, R.Jeewon & K.D.Hyde, 2003
Monographella Petr.
Morinia Berlese & Bresadola, 1889
Neobroomella Petrak, 1947
Neohypodiscus
Ommatomyces Kohlm., Volkm.-Kohlm. & O.E.Erikss., 1995
Paracainiella L.N.Vassiljeva, 1983
Pemphidium
擬盤多毛孢屬 Pestalotia De Not., 1841
Pestalozzia
Phaeorobillarda
Phorcys
Reticulosphaeria
Robillarda Sacc., 1882
Seimatoantlerium Strobel, E.Ford, J.Yi Li, J.Sears, Sidhu & W.M.Hess, 1999
Seynesia Sacc., 1883
联丝类盘多毛孢属 Synnemapestaloides T.Handa & Y.Harada, 2004
Synnemapestaloides ericacearum J.B.Tanney
Synnemapestaloides juniperi F.Liu, L.Cai & Crous
Synnemapestaloides rhododendri T.Handa & Y.Harada
香格里拉联丝类盘多毛孢 Synnemapestaloides shangrilaensis L.Lu & S.Tibpromma
Trochilispora V.P.Abreu, A.W.C.Rosado & O.L.Pereir
Urosporella
Urosporellopsis
Xylochora Arx & E.Müll.
Xylochora arxii Tilak, S.B.Kale & S.V.S.Kale
Xylochora craticola (H.Wegelin) Arx & E.Müll.
Xylochora nigropunctata (Romell) Arx & E.Müll.