Daftar nama ikan air tawar endemik Indonesia

| Osteochilus bleekeri | Cyprinidae | N/A | N/A | 2008 |
| Osteochilus borneensis | Cyprinidae | N/A | N/A | N/A |
| Osteochilus intermedius | Cyprinidae | N/A | N/A | N/A |
| Osteochilus jeruk | Cyprinidae | N/A | N/A | N/A |
| Osteochilus kappenii | Cyprinidae | N/A | N/A | N/A |
| Osteochilus kelabau | Cyprinidae | N/A | N/A | N/A |
| Osteochilus kuekenthali | Cyprinidae | N/A | N/A | N/A |
| Osteochilus partilineatus | Cyprinidae | N/A | N/A | N/A |
| Osteochilus pentalineatus | Cyprinidae | N/A | N/A | N/A |
| Osteochilus pleurotaenia OC | Cyprinidae | N/A | N/A | N/A |
| Osteochilus repang | Cyprinidae | N/A | N/A | N/A |
| Osteochilus serokan | Cyprinidae | N/A | N/A | N/A |
| Oxyeleotris altipinna | Eleotridae | N/A | N/A | N/A |
| Oxyeleotris urophthalmoides OC | Eleotridae | N/A | N/A | N/A |
| Oxyeleotris wisselensis | Eleotridae | Paniai Gudgeon | N/A | N/A |
| Paedocypris carbunculus | Cyprinidae | N/A | N/A | 2008 |
| Paedocypris progenetica | Cyprinidae | N/A | N/A | 2006 |
| Pandaka rouxi | Gobiidae | N/A | N/A | N/A |
| Pangasius bedado | Pangasiidae | N/A | N/A | N/A |
| Pangasius humeralis | Pangasiidae | N/A | N/A | N/A |
| Pangasius lithostoma | Pangasiidae | N/A | N/A | N/A |
| Pangasius mahakamensis | Pangasiidae | N/A | N/A | N/A |
| Pangasius nieuwenhuisii | Pangasiidae | N/A | N/A | N/A |
| Pangasius rheophilus | Pangasiidae | N/A | N/A | N/A |
| Pangio alternans | Cobitidae | Borneo Kuhli Loach | N/A | N/A |
| Pangio pulla | Cobitidae | Red Giant Kuhli Loach | N/A | N/A |
| Pangio robiginosa | Cobitidae | N/A | N/A | N/A |
| Pangio superba | Cobitidae | N/A | N/A | N/A |
| Parachela cyanea | Cyprinidae | N/A | N/A | N/A |
| Parachela ingerkongi | Cyprinidae | N/A | N/A | N/A |
| Paradoxodacna piratica | Ambassidae | N/A | N/A | N/A |
| Parakysis anomalopteryx | Parakysidae | N/A | N/A | N/A |
| Parakysis notialis | Parakysidae | N/A | N/A | N/A |
| Parambassis altipinnis | Ambassidae | High-finned Glass Perchlet | N/A | N/A |
| Parambassis macrolepis | Ambassidae | N/A | N/A | N/A |
| Paratherina cyanea | Telmatherinidae | N/A | N/A | N/A |
| Paratherina labiosa | Telmatherinidae | N/A | N/A | N/A |
| Paratherina striata | Telmatherinidae | N/A | N/A | N/A |
| Paratherina wolterecki | Telmatherinidae | N/A | N/A | N/A |
| Parosphromenus anjunganensis | Osphronemidae | Anjungan Licorice Gourami | N/A | N/A |
| Parosphromenus bintan | Osphronemidae | Bintan Licorice Gourami | N/A | N/A |
| Parosphromenus deissneri OC | Osphronemidae | Licorice Gourami | N/A | N/A |
| Parosphromenus filamentosus | Osphronemidae | Spiketail Licorice Gourami | N/A | N/A |
| Parosphromenus linkei | Osphronemidae | Linke’s Licorice Gourami | N/A | N/A |
| Parosphromenus opallios | Osphronemidae | N/A | N/A | 2005 |
| Parosphromenus ornaticauda | Osphronemidae | Redtail Licorice Gourami | N/A | N/A |
| Parosphromenus pahuensis | Osphronemidae | N/A | N/A | 2005 |
| Parosphromenus parvulus | Osphronemidae | Small Licorice Gourami | N/A | N/A |
| Parosphromenus quindecim | Osphronemidae | N/A | N/A | 2005 |
| Parosphromenus sumatranus | Osphronemidae | Fire Red Licorice Gourami | N/A | N/A |
| Pectenocypris balaena | Cyprinidae | N/A | N/A | N/A |
| Pectenocypris korthausae | Cyprinidae | Orange Doublespotted Rasbora | N/A | N/A |
| Pelangia mbutaensis | Melanotaeniidae | Lake Mbuta Rainbowfish | N/A | N/A |
| Pisodonophis hypselopterus | Ophichthidae | N/A | N/A | N/A |
| Polydactylus macrophthalmus | Polynemidae | River Threadfin | N/A | N/A |
| Polynemus kapuasensis | Polynemidae | N/A | N/A | 2003 |
| Poropuntius tawarensis | Cyprinidae | N/A | N/A | N/A |
| Pristolepis grootii OC | Nandidae | Indonesian Leaffish | N/A | N/A |
| Pseudeutropius brachypopterus | Schilbeidae | N/A | N/A | N/A |
| Pseudeutropius moolenburghae | Schilbeidae | N/A | N/A | N/A |
| Pseudobagarius meridionalis | Akysidae | N/A | N/A | 2004 |
| Pseudogobiopsis penango | Gobiidae | N/A | N/A | N/A |
| Pseudomugil ivantsoffi | Pseudomugilidae | N/A | N/A | N/A |
| Pseudomugil pellucidus | Pseudomugilidae | Transparent Blue-eye | N/A | N/A |
| Pseudomugil reticulatus | Pseudomugilidae | Vogelkop Blue-eye | N/A | N/A |
| Pseudomystus breviceps | Bagridae | N/A | N/A | N/A |
| Pseudomystus carnosus | Bagridae | N/A | N/A | 2005 |
| Pseudomystus flavipinnis | Bagridae | N/A | N/A | N/A |
| Pseudomystus heokhuii | Bagridae | N/A | N/A | 2008 |
| Pseudomystus mahakamensis | Bagridae | N/A | N/A | N/A |
| Pseudomystus moeschii | Bagridae | N/A | N/A | N/A |
| Pseudomystus myersi | Bagridae | N/A | N/A | N/A |
| Pseudomystus rugosus OC | Bagridae | N/A | N/A | N/A |
| Pseudomystus stenogrammus | Bagridae | N/A | N/A | 2005 |
| Pseudomystus vaillanti | Bagridae | N/A | N/A | N/A |
| Puntius anchisporus | Cyprinidae | N/A | N/A | N/A |
| Puntius aphya | Cyprinidae | N/A | N/A | N/A |
| Puntius bunau | Cyprinidae | N/A | N/A | 2005 |
| Puntius dorsimaculatus | Cyprinidae | Blackline Barb | N/A | N/A |
| Puntius endecanalis | Cyprinidae | N/A | N/A | N/A |
| Puntius foerschi | Cyprinidae | N/A | N/A | N/A |
| Puntius gemellus | Cyprinidae | N/A | N/A | N/A |
| Puntius microps | Cyprinidae | N/A | N/A | N/A |
| Puntius oligolepis IN | Cyprinidae | Checkered Barb | N/A | N/A |
| Puntius rhomboocellatus OC | Cyprinidae | Round-banded Barb | N/A | N/A |
| Puntius trifasciatus | Cyprinidae | N/A | N/A | N/A |
| Rasbora aprotaenia | Cyprinidae | N/A | N/A | N/A |
| Rasbora baliensis | Cyprinidae | N/A | N/A | N/A |
| Rasbora beauforti | Cyprinidae | Spotlight Rasbora | N/A | N/A |
| Rasbora borneensis | Cyprinidae | N/A | N/A | N/A |
| Rasbora bunguranensis OC | Cyprinidae | N/A | N/A | N/A |
| Rasbora dies | Cyprinidae | N/A | N/A | 2008 |
| Rasbora ennealepis | Cyprinidae | N/A | N/A | N/A |
| Rasbora jacobsoni | Cyprinidae | N/A | N/A | N/A |
| Rasbora johannae | Cyprinidae | N/A | N/A | N/A |
| Rasbora kalbarensis | Cyprinidae | Kalbar Rasbora | N/A | N/A |
| Rasbora laticlavia | Cyprinidae | N/A | N/A | N/A |
| Rasbora leptosoma | Cyprinidae | Copperstripe Rasbora | N/A | N/A |
| Rasbora reticulata | Cyprinidae | Reticulate Rasbora | N/A | N/A |
| Rasbora spilotaenia | Cyprinidae | N/A | N/A | N/A |
| Rasbora subtilis | Cyprinidae | N/A | N/A | N/A |
| Rasbora tawarensis | Cyprinidae | N/A | N/A | N/A |
| Rasbora tobana | Cyprinidae | N/A | N/A | N/A |
| Rasbora vulcanus | Cyprinidae | N/A | N/A | N/A |
| Redigobius amblyrhynchus | Gobiidae | N/A | N/A | N/A |
| Redigobius leptochilus | Gobiidae | N/A | N/A | N/A |
| Schismatorhynchos endecarhapis | Cyprinidae | N/A | N/A | N/A |
| Schismatorhynchos heterorhynchos OC | Cyprinidae | Dolphin Barb | N/A | N/A |
| Schistura maculiceps | Balitoridae | N/A | N/A | N/A |
| Scleropages aureus | Osteoglossidae | Gold Arowana | N/A | 2003 |
| Scleropages legendrei | Osteoglossidae | Red Arowana | N/A | 2003 |
| Scleropages macrocephalus | Osteoglossidae | Silver Asian Arowana | N/A | 2003 |
| Sicyopterus hageni | Gobiidae | Hagen’s Goby | N/A | N/A |
| Sicyopterus parvei | Gobiidae | N/A | N/A | N/A |
| Sicyopus exallisquamulus | Gobiidae | N/A | N/A | 2006 |
| Sicyopus multisquamatus | Gobiidae | N/A | N/A | N/A |
| Sicyopus mystax | Gobiidae | N/A | N/A | N/A |
| Silurichthys citatus | Siluridae | N/A | N/A | N/A |
| Silurichthys gibbiceps | Siluridae | N/A | N/A | N/A |
| Silurichthys sanguineus | Siluridae | N/A | N/A | N/A |
| Sphaerichthys acrostoma | Osphronemidae | Large Chocolate Gourami | N/A | N/A |
| Sphaerichthys selatanensis | Osphronemidae | Selatan Chocolate Gourami | N/A | N/A |
| Sphaerichthys vaillanti | Osphronemidae | Vaillant’s Chocolate Gourami | N/A | N/A |
| Stenogobius blokzeyli OC | Gobiidae | N/A | N/A | N/A |
| Stenogobius lachneri | Gobiidae | Bintuni Goby | N/A | N/A |
| Stenogobius zurstrassenii | Gobiidae | N/A | N/A | N/A |
| Stigmatogobius signifer | Gobiidae | N/A | N/A | 2005 |
| Stiphodon carisa | Gobiidae | N/A | N/A | 2008 |
| Stiphodon ornatus | Gobiidae | N/A | N/A | N/A |
| Stiphodon weberi | Gobiidae | N/A | N/A | N/A |
| Stiphodon zebrinus | Gobiidae | N/A | N/A | N/A |
| Sundadanio axelrodi | Cyprinidae | Axelrod’s Fire Rasbora | N/A | N/A |
| Sundagagata robusta | Sisoridae | N/A | N/A | N/A |
| Sundasalanx malleti | Sundasalangidae | N/A | N/A | N/A |
| Sundasalanx megalops | Sundasalangidae | N/A | N/A | N/A |
| Sundasalanx mesops | Sundasalangidae | N/A | N/A | N/A |
| Sundasalanx microps OC | Sundasalangidae | N/A | N/A | N/A |
| Sundasalanx platyrhynchus | Sundasalangidae | N/A | N/A | N/A |
| Sundoreonectes obesus | Balitoridae | N/A | N/A | N/A |
| Telmatherina abendanoni | Telmatherinidae | Matano Celebes Rainbowfish | N/A | N/A |
| Telmatherina antoniae | Telmatherinidae | N/A | N/A | N/A |
| Telmatherina bonti | Telmatherinidae | Lake Towuti Rainbowfish | N/A | N/A |
| Telmatherina celebensis | Telmatherinidae | N/A | N/A | N/A |
| Telmatherina obscura | Telmatherinidae | N/A | N/A | N/A |
| Telmatherina opudi | Telmatherinidae | N/A | N/A | N/A |
| Telmatherina prognatha | Telmatherinidae | N/A | N/A | N/A |
| Telmatherina sarasinorum | Telmatherinidae | N/A | N/A | N/A |
| Telmatherina wahjui | Telmatherinidae | N/A | N/A | N/A |
| Tetranesodon conorhynchus | Ariidae | N/A | N/A | N/A |
| Tetraodon waandersii | Tetraodontidae | N/A | N/A | N/A |
| Thryssocypris ornithostoma | Cyprinidae | N/A | N/A | N/A |
| Thryssocypris smaragdinus | Cyprinidae | N/A | N/A | N/A |
| Thynnichthys polylepis | Cyprinidae | N/A | N/A | N/A |
| Thynnichthys vaillanti | Cyprinidae | N/A | N/A | N/A |
| Tominanga aurea | Telmatherinidae | N/A | N/A | N/A |
| Tominanga sanguicauda | Telmatherinidae | Blood-tail Rainbowfish | N/A | N/A |
| Tondanichthys kottelati | Hemiramphidae | Kottelat’s Halfbeak | N/A | N/A |
| Trigonostigma hengeli OC | Cyprinidae | Glowlight Rasbora | N/A | N/A |
| Tryphauchenopsis intermedius | Gobiidae | N/A | N/A | N/A |
| Vaillantella cinnamomea | Balitoridae | Brown Forktail Loach | N/A | N/A |
| Variichthys jamoerensis | Terapontidae | Jamur Lake Grunter | N/A | N/A |
| Xenopoecilus oophorus | Adrianichthyidae | Eggcarrying Butingi | N/A | N/A |
| Xenopoecilus poptae | Adrianichthyidae | Popta’s Butingi | N/A | N/A |
| Xenopoecilus sarasinorum | Adrianichthyidae | Sarasin’s Minnow | N/A | N/A |
| Yirrkala gjellerupi | Ophichthidae | N/A | N/A | N/A |
| Zenarchopterus alleni | Hemiramphidae | Allen’s River Garfish | N/A | N/A |
| Zenarchopterus ornithocephala | Hemiramphidae | Vogelkop River Garfish | N/A | N/A |
| Zenarchopterus xiphophorus | Hemiramphidae | N/A | N/A | N/A |
| Nama Ilmiah | Famili | Nama Asing | Nama Lokal | Tahun Penemuan |
Keterangan:
N/A: Not Available (Belum ada data)