Daftar museum di Daerah Istimewa Yogyakarta

Berikut adalah daftar museum di Daerah Istimewa Yogyakarta berdasarkan data dari Asosiasi Museum Indonesia dan Kemendagri. Daftar museum ini diurutkan berdasarkan kabupaten dan abjad sebagai berikut:
| No>  | Kode Pengelolaan | Nama Museum | Alamat | Kapanewon/Kemantren | Kabupaten/Kota |
| --- | --- | --- | --- | --- | --- |
| 1 | MS000251 | Museum Affandi | Jl. Laksda Adisucipto No. 167 | Sleman | Sleman |
| 2 | MS000485 | Museum Bahari Yogyakarta | Jl. R.E. Martadinata No. 69 | Wirobrajan | Kota Yogyakarta |
| 3 | MS000254 | Museum Batik Yogyakarta | Jl. Dr. Sutomo No. 13A | Danurejan | Kota Yogyakarta |
| 4 | MS000242 | Museum Benteng Vredeburg | Jl. Jenderal Ahmad Yani No. 6 | Gondomanan | Kota Yogyakarta |
| 5 | MS000241 | Museum Biologi UGM | Jl. Sultan Agung No. 22 | Mergangsan | Kota Yogyakarta |
| 6 | MS000278 | Museum Candi Prambanan | Jl. Jogja-Solo KM 16 | Prambanan | Sleman |
| 7 | MS000250 | Museum Dewantara Kirti Griya | Jl. Tamansiswa No. 31 | Pakualaman | Kota Yogyakarta |
| 8 | MS000486 | Museum Gempa Prof. Dr. Sarwidi | Jl. Malangyudo No. 25 | Pakem | Sleman |
| 9 | MS000244 | Museum Geoteknologi Mineral | Kampus II UPN Veteran | Depok | Sleman |
| 10 | MS000272 | Museum Gumuk Pasir | Pantai Parangtritis dan Parang Kusumo | Kretek | Bantul |
| 11 | MS000269 | Museum Gunungapi Merapi | Jl. Boyong, Hargobinangun | Pakem | Sleman |
| 12 | MS000275 | Museum Istana Kepresidenan Yogyakarta | Jl. Malioboro, Kompleks Gedung Agung | Gondomanan | Kota Yogyakarta |
| 13 | MS000258 | Museum Kayu Wanagama | Desa Bunder | Playen | Gunungkidul |
| 14 | MS000249 | Museum Keraton Yogyakarta | Jl. Rotowijayan No. 1 | Kraton | Kota Yogyakarta |
| 15 | MS000268 | Museum Memorial Jenderal Besar H. M. Soeharto | Dusun Kemusuk, Argomulyo | Sedayu | Bantul |
| 16 | MS000260 | Museum Monumen Kesatuan Pergerakan Wanita Indonesia | Jl. Laksda Adisucipto No. 88 | Depok | Sleman |
| 17 | MS000255 | Museum Monumen Pangeran Diponegoro | Jl. HOS Cokroaminoto TR III No. 430 | Tegalrejo | Kota Yogyakarta |
| 18 | MS000253 | Museum Monumen Yogya Kembali | Jl. Ring Road Utara, Jongkang | Ngaglik | Sleman |
| 19 | MS000270 | Museum Paleoantropologi | Jl. Medika, Sekip | Depok | Sleman |
| 20 | MS000274 | Museum Pendidikan Indonesia Universitas Negeri Yogyakarta | Kampus Pusat Universitas Negeri Yogyakarta | Depok | Sleman |
| 21 | MS000240 | Museum Perjuangan Yogyakarta | Jl. Kolonel Sugiyono No. 24 | Mergangsan | Kota Yogyakarta |
| 22 | MS000243 | Museum Pura Pakualaman | Jl. Sultan Agung | Pakualaman | Kota Yogyakarta |
| 23 | MS000246 | Museum Pusat TNI AD Dharma Wiratama | Jl. Jenderal Sudirman No. 75 | Gondokusuman | Kota Yogyakarta |
| 24 | MS000245 | Museum Pusat TNI AU Dirgantara Mandala | Jl. Pangkalan Adi Sucipto | Depok | Sleman |
| 25 | MS000259 | Museum Rumah Sakit Mata dr. Yap | Jl. Cik Di Tiro No. 5 | Gondokusuman | Kota Yogyakarta |
| 26 | MS000263 | Museum Sandi | Jl. Faridan Muridan Noto No. 21 | Gondokusuman | Kota Yogyakarta |
| 27 | MS000261 | Museum Sasmitaloka Panglima Besar Jenderal Sudirman | Jl. Bintaran Wetan No. 3 | Mergangsan | Kota Yogyakarta |
| 28 | MS000279 | Museum Sejarah Purbakala Pleret | Jl. Raya Pleret, Kedaton | Pleret | Bantul |
| 29 | MS000238 | Museum Sonobudoyo | Jl. Trikora No. 6, Pendowoharjo | Gondomanan | Kota Yogyakarta |
| 30 | MS000280 | Museum Taman Tino Sidin | Jl. Tino Sidin No.297, Kadipiro | Kasihan | Bantul |
| 31 | MS000273 | Museum Tani Jawa Indonesia | Dusun Candran, Kebonagung | Bantul | Bantul |
| 32 | MS000257 | Museum Tembi Rumah Budaya | Jl. Parangtritis KM 8,4 Tembi | Sewon | Bantul |
| 33 | MS000256 | Museum Ullen Sentalu | Kawasan Wisata Kaliurang | Sleman | Sleman |
| 34 | MS000267 | Museum Universitas Gadjah Mada | Kampus UGM Bulak Sumur Blok D-6 dan D-7 | Depok | Sleman |
| 35 | MS000487 | Museum Universitas Islam Indonesia | Jl. Kaliurang KM 14 | Ngemplak | Sleman |
| 36 | MS000252 | Museum Wayang Kekayon | Jl. Jogja-Wonosari KM 7 No. 277 | Banguntapan | Bantul |
| 37 | - | Museum Kulon Progo (Eks Pengepul Nila) | Desa Bulurejo | Pengasih | Kulon Progo |
| 38 | - | Museum Cokelat Monggo | Jl. Tugu Gentong, Sribitan | Kasihan | Bantul |
| 39 | - | Museum Wayang Beber Sekartaji | Gg. Pancasila, RT 08 | Bambanglipuro | Bantul |
| 40 | - | Museum Padepokan Sumber Karahayon | Jl. Samas, Ponogaram | Banguntapan | Bantul |
| 41 | - | Museum Batik Joglo Cipto Wening | Desa Ketandan Tengah | Imogiri | Bantul |
| 42 | - | Museum Bantul Masa Belanda | Jl. Ngringinan, Kedon | Bantul | Bantul |
| 43 | - | Museum History of Java | Jl. Parangtritis KM 5.5 | Sewon | Bantul |
| 44 | - | Museum Muhammadiyah | Kampus IV Universitas Ahmad Dahlan | Banguntapan | Bantul |
| 45 | - | Museum Sejarah UPY | Kampus Pusat UPY Gedung B Lantai 1 | Kasihan | Bantul |
| 46 | - | Museum Anak Kolong Tangga | Jl. Tirtodipuran No. 26 | Mantrijeron | Kota Yogyakarta |
| 47 | - | Museum Kereta Keraton | Jl. Rotowijayan | Kraton | Kota Yogyakarta |
| 48 | - | Museum Kebun Raya Gembira Loka | Jl. Kebun Raya No. 2, Rejowinangun | Kotagede | Kota Yogyakarta |
| 49 | - | Museum Kotagede | Jl. Tegal Gendu No. 20, Prenggan | Kotagede | Kota Yogyakarta |
| 50 | - | Museum Monumen Pahlawan Pancasila | Jl. Kentungan, Condongcatur | Depok | Sleman |