Conditions: High Risk Smoldering Multiple Myeloma
Keywords: Smoldering multiple myeloma myeloma smoldering ibrutinib
Allocation: NA | Intervention model: SINGLE_GROUP
Enrollment: 9
Healthy volunteers: no

Brief summary:
The purpose of this research study is to test whether the drug ibrutinib (trademark name: IMBRUVICA®) is effective at preventing the development of multiple myeloma in people who currently have smoldering myeloma. The researchers conducting this trial) have reason to believe that ibrutinib can delay the development of multiple myeloma, thus giving people who currently have smoldering myeloma a longer period of time when they feel healthy and well.

Smoldering myeloma is an abnormal condition that is considered to be an early phase of the disease multiple myeloma. In this disorder, there is an abnormal growth of plasma cells, which is a type of blood cell found in the bone marrow. This growth is not as severe in people with smoldering myeloma as it is in multiple myeloma, so people with smoldering myeloma do not have any symptoms and tend to feel well. However, they have a higher risk of developing multiple myeloma than people in the general population.

Some people with smoldering myeloma are at an especially high risk of developing myeloma - 50% of these people will develop multiple myeloma 2 years after they are diagnosed with smoldering myeloma. The investigators identify these people by looking at the amount of myeloma in the bone marrow (called "bone marrow plasma cell percentage") and the amount of myeloma protein (called "serum protein electrophoresis" and "serum free light chain assay") in the blood. To be considered high risk, individuals must have highly abnormal levels for these tests.

Based upon current guidelines, people with smoldering myeloma do not require any treatment. However, known is that many of these people will develop multiple myeloma in the near future. Currently there have been no proven and effective way of preventing these people from developing multiple myeloma, which remains an incurable disease.

Detailed description:
This is a phase 2, open-label, single center, prospective pilot study designed to assess the efficacy of ibrutinib in subjects with high risk smoldering multiple myeloma.

All enrolled subjects will be treated with ibrutinib 560 mg (4 capsules, each containing 140 mg) taken PO daily for 12 cycles (28 days each). If a subject demonstrates benefit from ibrutinib, therapy may be extended beyond 12 cycles to a maximum of 2 years. Subjects who progress and meet criteria for symptomatic multiple myeloma will be withdrawn from study.

An initial cohort of 15 subjects will be accrued. If 4 or more patients progress to symptomatic myeloma in one year, then the study will be reviewed with the FDA to determine whether to employ a higher dose of ibrutinib, or to stop for futility. Otherwise, 21 additional patients will be accrued for a total sample size of 36.

Arms:
arm 1: Ibrutinib (trademark name is IMBRUVICA®). 560 mg dose administered on a continuous basis

Interventions: intervention 1: Ibrutinib
Intervention descriptions: intervention 1: Ibrutinib is a type of drug called a "kinase inhibitor." Kinases are proteins inside cells that help cells live and grow. Ibrutinib blocks a specific kinase protein in our bodies. This protein is thought to be very important in helping blood cancer cells live and grow. By blocking this kinase protein, ibrutinib stops cancer cells from growing.

Protocol document:
Prot_SAP_000.pdf: 
A Phase 2 Study of the Effect of the Bruton’s Tyrosine Kinase Inhibitor Ibrutinib on Disease 
Response in Patients with High Risk Smoldering Multiple Myeloma 
PI: Ajai Chari, MD 
NCT02943473 
Document Date: July 17 2017


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 1 
 
 
 
 
IST PROTOCOL 
 
 
TITLE: 
A Phase 2 Study of the Effect of the Bruton’s Tyrosine Kinase 
Inhibitor Ibrutinib on Disease Response in Patients with High Risk 
Smoldering Multiple Myeloma 
 
PROTOCOL NUMBER: 
20053 
 
 
STUDY DRUG: 
Ibrutinib (PCI-32765) 
 
 
PRINCIPAL 
INVESTIGATOR: 
Ajai Chari, MD 
Associate Professor 
Icahn School of Medicine at Mount Sinai 
One Gustave L. Levy Place, Box 1185 
New York, NY 10029 
 
CO-INVESTIGATORS: 
Siyang Leng, MD 
Instructor 
Columbia University Medical Center 
177 Fort Washington Ave, MHB 6GN 
New York, NY 10032 
 
Sundar Jagannath, MD 
Professor 
Icahn School of Medicine at Mount Sinai 
One Gustave L. Levy Place, Box 1185 
New York, NY 10029 
 
 
DATE FINAL: 
17 July 2017 
 
 
 
 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 2 
TABLE OF CONTENTS 
TABLE OF CONTENTS ..............................................................................................................2 
SYNOPSIS ......................................................................................................................................6 
ABBREVIATIONS ......................................................................................................................12 
1. 
BACKGROUND ...................................................................................................................14 
1.1. 
Disease ...............................................................................................................................14 
 
1.1.2. 
Role of BTK in Disease/Histology ..............................................................................15 
1.2. 
Study Rationale ..................................................................................................................16 
1.2.1. 
Mechanistic/Pre-clinical ..............................................................................................16 
1.2.2. 
Clinical .........................................................................................................................17 
1.3. 
Investigational Product Name and Description .................................................................17 
1.4. 
Summary of Nonclinical Data ...........................................................................................18 
1.4.1. 
Pharmacology ..............................................................................................................18 
1.4.2. 
Toxicology ...................................................................................................................18 
1.4.2.1. 
Carcinogenesis, Mutagenesis, Impairment of Fertility ..........................................19 
1.5. 
Summary of Clinical Data .................................................................................................19 
1.5.1. 
Pharmacokinetics and Product Metabolism .................................................................19 
1.6. 
Summary of Clinical Safety ...............................................................................................20 
1.6.1. 
Monotherapy Studies ...................................................................................................20 
1.6.2. 
Risks .............................................................................................................................20 
1.6.2.1. 
Bleeding-related events ..........................................................................................20 
1.6.2.2. 
Atrial fibrillation ....................................................................................................20 
1.6.2.3. 
Diarrhea..................................................................................................................21 
1.6.2.4. 
Infections................................................................................................................21 
 
1.6.2.5. 
Non-melanoma Skin Cancer ..................................................................................21 
1.6.2.6. 
Rash........................................................................................................................21 
1.6.2.7. 
Tumor Lysis Syndrome..........................................................................................21 
1.6.2.8. 
Interstitial Lung Disease (ILD) ..............................................................................21 
1.6.2.9. 
Cytopenias..............................................................................................................21 
1.6.2.10. 
Lymphocytosis and Leukostasis ............................................................................22 
2. 
STUDY OBJECTIVE ...........................................................................................................22 
2.1. 
Primary Objective ..............................................................................................................22 
2.2. 
Secondary Objectives.........................................................................................................22 
3. 
STUDY DESIGN ..................................................................................................................23 
3.1. 
Overview of Study Design .................................................................................................23 
3.1.1. 
Study Schema...............................................................................................................23 
3.2. 
Study Design Rationale......................................................................................................24 
4. 
SUBJECT SELECTION ......................................................................................................25 
4.1. 
Inclusion Criteria ...............................................................................................................25 
4.2. 
Exclusion Criteria ..............................................................................................................26 
5. 
TREATMENT OF SUBJECTS ...........................................................................................28 
5.1. 
Treatment allocation ..........................................................................................................28 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 3 
5.2. 
Study treatment ..................................................................................................................28 
5.2.1. 
Route and schedule ......................................................................................................28 
5.3. 
Study Medications .............................................................................................................29 
5.3.1. 
Ibrutinib........................................................................................................................29 
5.3.1.1. 
Formulation/Packaging/Storage .............................................................................29 
5.3.1.2. 
Dose and Administration .......................................................................................29 
5.3.1.3. 
Overdose ................................................................................................................30 
5.3.1.4. 
Dose Modification of Ibrutinib for Adverse Reactions .........................................30 
5.3.1.5. 
Dose Modification for Hepatic Impaired Subjects ................................................31 
5.4. 
Criteria for Permanent Discontinuation of Study Drug .....................................................31 
6. 
CONCOMITANT MEDICATIONS/PROCEDURES ......................................................32 
6.1. 
Permitted Concomitant Medications ..................................................................................32 
6.2. 
Medications to be Used with Caution ................................................................................32 
6.2.1. 
CYP3A- Inhibitors/Inducers ........................................................................................32 
6.2.2. 
QT Prolonging Agents .................................................................................................33 
6.2.3. 
Antiplatelet Agents and Anticoagulants ......................................................................33 
6.3. 
Prohibited Concomitant Medications ................................................................................34 
6.4. 
Guidelines for Ibrutinib Management with Surgeries or Procedures ................................34 
6.4.1. 
Minor Surgical Procedures ..........................................................................................34 
6.4.2. 
Major Surgical Procedures ...........................................................................................34 
6.4.3. 
Emergency Procedures.................................................................................................34 
7. 
STUDY EVALUATIONS ....................................................................................................34 
7.1. 
Description of Procedures ..................................................................................................34 
7.1.1. 
Physical Examination, Height and Weight ..................................................................35 
7.1.2. 
Vital Signs ....................................................................................................................35 
7.1.3. 
Eastern Cooperative Oncology Group (ECOG) Performance Status ..........................35 
7.1.4. 
Laboratories .................................................................................................................35 
7.1.4.1. 
CBC with differential .............................................................................................35 
7.1.4.2. 
Serum chemistries ..................................................................................................35 
7.1.4.3. 
Coagulation studies ................................................................................................35 
7.1.4.4. 
Urinalysis ...............................................................................................................35 
7.1.4.5. 
Pregnancy Test .......................................................................................................36 
7.1.4.6. 
Serum and Urine Protein Electrophoresis ..............................................................36 
7.1.4.7. 
Serum Free Light Chain Assay ..............................................................................36 
7.1.4.8. 
Serum and Urine Immunofixation .........................................................................36 
7.1.4.9. 
Quantitative Serum Immunoglobulins (IgA, IgG, IgM) ........................................36 
7.1.4.10. 
Serum β2-microglobulin ........................................................................................36 
7.1.4.11. 
25-hydroxy vitamin D ............................................................................................36 
7.1.4.12. 
Biomarkers .............................................................................................................36 
7.1.4.13. 
Genomic and immunologic correlatives ................................................................36 
7.1.5. 
Diagnostics/Procedures ................................................................................................37 
7.1.5.1. 
Electrocardiogram (ECG) ......................................................................................37 
7.1.5.2. 
Bone marrow aspiration and biopsy ......................................................................37 
7.1.5.3. 
Bone radiological assessment ................................................................................37 
7.2. 
Efficacy Evaluations ..........................................................................................................37 
7.2.1. 
Survival and subsequent anticancer therapies..............................................................38 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 4 
7.2.1.1. 
Survival ..................................................................................................................38 
7.2.1.2. 
Subsequent Anticancer Therapies ..........................................................................38 
7.3. 
Sample Collection and Handling .......................................................................................38 
8. 
STUDY PROCEDURES ......................................................................................................39 
8.1. 
Screening Phase .................................................................................................................39 
8.2. 
Treatment Phase .................................................................................................................40 
8.3. 
Follow-up Phase.................................................................................................................42 
9. 
SUBJECT COMPLETION AND WITHDRAWAL .........................................................42 
9.1. 
Completion .........................................................................................................................42 
9.2. 
Withdrawal from Study......................................................................................................42 
10. STATISTICAL METHODS AND ANALYSIS .................................................................43 
10.1. Subject Information ...........................................................................................................43 
10.2. Endpoints ...........................................................................................................................43 
10.2.1. 
Primary Endpoints .......................................................................................................43 
10.2.2. 
Secondary Endpoints ...................................................................................................43 
10.2.2.1. 
Overall response rate..............................................................................................43 
10.2.2.2. 
Bone Density ..........................................................................................................43 
Changes in bone density and qCT after 12 cycles of ibrutinib therapy will be measured. ............43 
10.2.2.3. 
PET-MRI................................................................................................................43 
10.2.2.4. 
Bone-related Biomarkers .......................................................................................44 
10.2.2.5. 
Genomic and Immunologic Correlatives ...............................................................44 
10.3. Sample Size Determination................................................................................................44 
10.4. Efficacy Analysis ...............................................................................................................44 
10.5. Safety Analysis ..................................................................................................................44 
10.6. Biomarker Analyses ...........................................................................................................45 
11. ADVERSE EVENT REPORTING .....................................................................................45 
11.1. Definitions..........................................................................................................................45 
11.1.1. 
Adverse Events ............................................................................................................45 
11.1.2. 
Serious Adverse Events ...............................................................................................46 
11.1.3. 
Severity Criteria (Grade 1-5) .......................................................................................47 
11.1.4. 
Causality (Attribution) .................................................................................................48 
11.2. Unexpected Adverse Events ..............................................................................................48 
11.3. Documenting and Reporting of Adverse Events and Serious Adverse Events by 
Investigators ...................................................................................................................................48 
11.3.1. 
Assessment of Adverse Events ....................................................................................48 
11.3.2. 
Adverse Event Reporting Period .................................................................................49 
11.3.3. 
Pregnancy .....................................................................................................................49 
11.3.4. 
Other Malignancies ......................................................................................................50 
11.3.5. 
Eye-Related Adverse Events........................................................................................50 
11.3.6. 
Adverse Events of Special Interest (AESI) ..................................................................50 
11.3.6.1. Major Hemorrhage .......................................................................................................50 
11.3.7. 
Expediting Reporting Requirements for Serious Adverse Events ...............................51 
12. STUDY ADMINISTRATION AND INVESTIGATOR OBLIGATIONS ......................51 
12.1. Regulatory and Ethical Compliance ..................................................................................51 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 5 
12.2. Institutional Review Board (IRB), Research Ethics Board (REB) and Independent Ethics 
Committee (IEC) Approval............................................................................................................52 
12.3. Informed Consent...............................................................................................................52 
12.4. Quality Control and Quality Assurance .............................................................................52 
12.5. Protected Subject Health Information Authorization ........................................................53 
12.6. Study Files and Record Retention......................................................................................53 
12.7. Case Report Forms and Record Maintenance ....................................................................54 
12.8. Investigational Study Drug Accountability .......................................................................54 
12.8.1. 
Receipt of Study Drug .................................................................................................54 
12.8.2. 
Storage .........................................................................................................................54 
12.8.3. 
Unused Study Drug Supplies .......................................................................................54 
12.9. Study Monitoring/Audit Requirements..............................................................................55 
12.10. Investigator Responsibilities ..............................................................................................55 
12.11. Protocol Amendments ........................................................................................................56 
12.12. Publication of Study Results ..............................................................................................56 
12.13. Study Discontinuation ........................................................................................................56 
13. REFERENCES .....................................................................................................................57 
14. APPENDICES .......................................................................................................................60 
14.1. Appendix 1.  Schedule of Assessments .............................................................................61 
14.2. Appendix 2.  Inhibitors and Inducers of CYP3A ...............................................................62 
14.3. Appendix 3.  IMWG Uniform Response Criteria44 ...........................................................64 
14.4. Appendix 4.  Dose Diary ...................................................................................................65 
14.5. Appendix 5.  Child-Pugh Score .........................................................................................66 
14.6. Appendix 6.  ECOG Performance Status ...........................................................................67 
14.7. Appendix 7.  Image Assessment of Bone Lesions 
 
 
 
 
        68 
 
 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 6 
SYNOPSIS 
Study Title: 
A Phase 2 Study of the Effect of the Bruton’s Tyrosine Kinase Inhibitor 
Ibrutinib on Disease Response in Patients with High Risk Smoldering 
Multiple Myeloma 
Protocol Number: 
20053 
Study Phase: 
2 
Study Duration: 
Two years 
Investigational Product 
and Reference Therapy: 
Ibrutinib (PCI-32765) 140 mg hard gelatin capsules, for oral (PO) 
administration.   
Objectives: 
Primary Objective: 
To evaluate the proportion of patients with high risk smoldering multiple 
myeloma who do not progress to symptomatic myeloma as defined by the 
IMWG after 12 cycles (each 28 days) of ibrutinib therapy. 
 
Secondary Objectives: 
1. Overall response rate, defined as partial response or better per 
IMWG criteria 
2. Changes in bone density and qCT, particularly in patients with 
osteopenia (defined as T-score on bone densitometry testing 
(DEXA) of -1 to -2.5). 
3. Changes in PET-MRI, particularly in patients with osteopenia 
4. Changes in bone related biomarkers, particularly in patients with 
osteopenia: 
a. Serum: interleukin-6 (IL-6), stromal cell-derived factor-1 
(SDF-1), receptor activator of nuclear-factor kappa B ligand 
(RANKL), macrophage inflammatory protein-1α (MIP-1α), 
Dickkopf-1 (DKK-1), C-terminal telopeptide (CTX) 
b. Urine: N-terminal telopeptide (NTx) 
5. Genomic and immunologic correlatives in a separate companion 
study 
Study Design: 
This is a phase 2, open-label, single center, prospective pilot study designed 
to assess the efficacy of ibrutinib in subjects with high risk smoldering 
multiple myeloma. 
 
All enrolled subjects will be treated with ibrutinib 560 mg (4 capsules, each 
containing 140 mg) taken PO daily for 12 cycles (28 days each).  If a subject 
demonstrates benefit from ibrutinib, therapy may be extended beyond 12 
cycles to a maximum of 2 years.  Subjects who progress and meet criteria 
for symptomatic multiple myeloma will be withdrawn from study. 
 
An initial cohort of 15 subjects will be accrued.  If 4 or more patients 
progress to symptomatic myeloma in one year, then the study will be 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 7 
reviewed with the FDA to determine whether to employ a higher dose of 
ibrutinib, or to stop for futility.  Otherwise, 21 additional patients will be 
accrued for a total sample size of 36. 
Population: 
Patients with high risk smoldering multiple myeloma. 
Centers: 
Single 
Inclusion Criteria: 
Refer to Section 4.0 for 
the complete and detailed 
list of inclusion/exclusion 
criteria. 
Disease Related 
The following patients will be considered for enrollment: 
• 
36 evaluable patients with high risk smoldering multiple myeloma, 
defined as having bone marrow plasma cells between 10% and 60%, 
with one of the following: 
o High paraprotein burden: Serum M-protein ≥ 3 g/dL [except 
IgA ≥ 2 g/dL] or urine M-protein > 500 mg per 24 hours  
o Moderate paraprotein burden: [(serum m protein < 3 g/dl but > 
1 g/dl) or (urine m-protein > 200 mg/24h)] AND serum free 
light chain ratio < 0.126 or > 8 
o involved to uninvolved free light chain ratio of > 100  
o abnormal plasma cell phenotype > 95% and immunoparesis 
(defined by a reduction below the lower limit of normal in 1 or 
2 of the uninvolved immunoglobulins)  
o evolving type of smoldering MM defined as 
 
:⩾10% Increase in serum M-protein and/or involved immunoglobulin level 
within the first 6 months of diagnosis (only if baseline M-protein was 
⩾3 g/dl)  
        and/or  
 
⩾25% increase in serum M-protein and/or involved immunoglobulin level 
within the first 12 months of diagnosis (for any level of M-protein) plus 
minimum increase of  0.5 g/dl in M-protein or 500 mg/dl in immunoglobulin 
or both 
o presence of translocation (4;14) or deletion 17 p  
• 
Measurable disease, defined as M-protein ≥ 1 g/dL OR Bence-Jones 
protein (BJP) > 200 mg/24 hr OR involved free light chain > 100 mg/dL 
• 
Diagnosed with smoldering myeloma within the last 4 years 
 
Laboratory 
• 
Adequate hematologic function independent of transfusion and growth 
factor support for at least 7 days prior to screening and:  
o Absolute neutrophil count > 750 cells/mm3 (0.75 x 109/L)  
o Platelet count > 75,000 cells/mm3 (75 x 109/L) 
• 
Adequate hepatic and renal function defined as: 
o Serum aspartate transaminase (AST) and alanine transaminase 
(ALT) ≤ 3.0 x upper limit of normal (ULN) 
o Estimated creatinine clearance ≥ 30 mL/min (Cockcroft-Gault) 
o Bilirubin ≤ 1.5 x ULN (unless bilirubin rise is due to Gilbert’s 
syndrome or of non-hepatic origin, in which case the total 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 8 
bilirubin should be < 3 x ULN) 
• 
PT/INR < 1.5 x ULN and PTT (aPTT) < 1.5 x ULN 
 
Demographics 
• 
Men and women ≥ 18 years of age 
• 
Eastern Cooperative Oncology Group (ECOG) performance status of < 
2 
Exclusion Criteria: 
Disease-Related 
• 
No end organ damage attributable to a plasma cell disorder, defined as 
having ANY of the following: 
o Hypercalcemia:  Serum calcium > 1 mg/dL above the upper 
limit of normal or > 11 mg/dL 
o Renal insufficiency:  Serum creatinine > 2 mg/dL or creatinine 
clearance < 30 mL per min 
o Anemia:  Hemoglobin > 2 g/dL below the lower limit of normal 
or hemoglobin < 10 g/dL 
o Bone lesions:  One or more lytic lesions on skeletal 
radiography, CT, MRI, PET-CT, or PET-MRI 
• 
Bone marrow plasma cells < 10% or > 60% 
• 
Has received prior anti-myeloma therapy of any type 
• 
Has received prior bisphosphonate therapy 
• 
Has received an investigational drug, investigational vaccine, or has 
used an investigational medical device within 4 weeks or 4 half-lives, 
whichever is longer, before Cycle 1, Day 1 of study therapy 
• 
Osteoporosis, defined as having a T-score on DEXA of ≤ -2.5 
 
Concurrent Conditions 
• 
History of other malignancies, except:  
o Malignancy treated with curative intent with no known active 
disease for ≥ 3 years before the first dose of study medication 
and felt to be at low risk for recurrence by treating physician 
o Adequately treated non-melanoma skin cancer or lentigo 
maligna without evidence of disease 
o Adequately treated carcinoma in situ without evidence of 
disease 
• 
Concurrent systemic immunosuppressant therapy (eg, cyclosporine A, 
tacrolimus, etc.), or administration of corticosteroid medication 
EITHER for > 14 days OR at dosages of > 20 mg/day of prednisone or 
equivalent  
• 
Vaccinated with a live, attenuated vaccine within 4 weeks of first study 
treatment 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 9 
• 
Recent or active infection requiring systemic treatment within 14 days 
of the first study treatment 
• 
Known bleeding disorders (eg, von Willebrand’s disease, hemophilia) 
• 
Concomitant use of warfarin or other vitamin K antagonists within 7 
days of treatment initiation 
• 
Requires treatment with a strong cytochrome P450 (CYP) 3A inhibitor 
or inducer (see Appendix 3) 
• 
History of stroke or intracranial hemorrhage within 6 months prior to 
enrollment 
• 
Known history of human immunodeficiency virus (HIV), or active 
hepatitis C virus (HCV) or hepatitis B virus (HBV) infection.  Subjects 
who are positive for hepatitis B core antibody or hepatitis B surface 
antigen must have a negative polymerase chain reaction (PCR) result 
before enrollment.  Those who are PCR positive will be excluded. 
• 
Major surgery within 4 weeks of first study treatment 
• 
Currently active, clinically significant cardiovascular disease, such as 
uncontrolled arrhythmia or Class 3 or 4 congestive heart failure as 
defined by the New York Heart Association Functional Classification; 
or a history of myocardial infarction, unstable angina, or acute coronary 
syndrome within 6 months prior to start of first study treatment 
• 
Currently active, clinically significant hepatic impairment (≥ mild 
hepatic impairment according to the Child Pugh classification 
(Appendix 5) 
• 
Unable to swallow capsules, malabsorption syndrome, prior resection of 
the stomach or small bowel, symptomatic inflammatory bowel disease 
or ulcerative colitis, partial or complete bowel obstruction, or any other 
disease significantly affecting gastrointestinal function 
• 
Any life-threatening illness, medical condition, or organ system 
dysfunction that, in the investigators’ opinion, could compromise the 
subject’s safety or put the study outcomes at undue risk 
Study Treatment: 
Ibrutinib 560 mg (4 hard gelatin capsules, each containing 140 mg) for oral 
(PO) administration.   
Concomitant Therapy: 
Permitted Concomitant Therapy  
Standard supportive agents (eg, for nausea, diarrhea) are permitted as 
clinically indicated.  Short courses (< 14 days) of corticosteroids at dosages 
equivalent to prednisone ≤ 20 mg per day for treatment of non-cancer-
related medical reasons are permitted 
 
Prohibited Concomitant Therapy  
Myeloma-targeted therapy including immunomodulatory agents (eg, 
lenalidomide), proteasome inhibitors (eg, bortezomib), histone deacetylase 
inhibitors, or bisphosphonates.  Any use of corticosteroids EITHER for > 14 
days OR at dosages > 20 mg/day of prednisone or equivalent is prohibited.  


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 10 
Strong CYP3A4 inhibitors. Any other chemotherapy, anticancer 
immunotherapy, radiotherapy, or other experimental therapies are 
prohibited. 
 
Refer to Appendix 2 for guidance on drugs that are CYP P450 inhibitors.  
Refer to Section 6.2.4 for guidance on concomitant use of anticoagulants.  
Safety Plan: 
 
Utilizing a 30% toxicity rate (based upon all event terms of Grade 3 or 
greater), sequential boundaries will be used to monitor all enrolled subjects.  
The accrual will be halted if excessive toxicities are seen.  See table in 
Section 10.5 for boundaries. 
 
Data and safety will be monitored by an internal Data and Safety 
Monitoring Board (DSMB) chaired by the PI.  Other members of the 
committee will include co-investigators, the myeloma research program 
manager, and clinical research coordinators.  All of these individuals have 
experience in clinical care as well as clinical research and monitoring of 
subjects with multiple myeloma.  A statistician will also serve as a member 
of the committee. 
 
Expected events in a population of patients with smoldering multiple 
myeloma include progression to multiple myeloma (as evidenced by 
hypercalcemia, renal insufficiency, anemia, lytic bone lesions, and ≥ 60% 
bone marrow plasma cells), infections, and venous thromboembolism.  
These events will be monitored for frequency and severity.  If the 
investigators become aware that an otherwise expected adverse event has 
increased in severity or frequency, these will be promptly reported to the 
Tisch Cancer Institute (TCI) Data and Safety Monitoring Committee 
(DSMC), the IRB, and Pharmacyclics as an unexpected event.  All deaths 
and any unanticipated serious adverse events will be reported to these three 
groups as well as to the FDA.  The study will be stopped until the event has 
been fully evaluated and discussed with the FDA. 
 
The myeloma research program manager will log and track all adverse 
events (graded by NCI CTC criteria), subject enrollment, and protocol 
compliance.  These findings will be systematically reviewed by the DSMB 
after the first three patients have completed 3 months of study treatment and 
thereafter every four months.  A written report of the DSMB’s findings will 
be generated.  This report will be sent to the TCI DSMC.  If the DSMB 
determines that due to safety or concern about lack of efficacy the study 
must be halted or the protocol modified, the TCI DSMC, IRB, and 
Pharmacyclics will be promptly notified and provided a copy of the written 
report. 
Statistical Methods and 
Data Analysis: 
All efficacy analyses will be performed using the intent-to-treat (ITT) 
population.  
 
Primary efficacy analysis: 
Proportion of patients who do not progress to symptomatic myeloma by 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 11 
IMWG criteria (except serum free light chain ratio – subjects who start at or 
develop a serum free light chain ratio ≥100 will be permitted to be on study) 
at 1 year amongst subjects who have completed at least 1 cycle.  
 
Secondary efficacy analysis: 
1. Overall response rate, defined as partial response or better by 
IMWG criteria 
2. In subjects with osteopenia, improvements in bone density by 
DEXA and qCT with fine element analysis in all subjects 
3. Changes in PET-MRI 
4. Changes in bone related biomarkers: 
a. Serum: IL-6, SDF-1, RANKL, MIP-1α, DKK-1, CTX 
b. Urine: NTx 
5. Genomic and immunologic correlatives in a separate companion 
study 
Sample Size 
Determination 
Null hypothesis: Approximately 25% of high risk SMM patients are 
expected to progress to symptomatic MM at 1 year. 
 
Alternative hypothesis: Given that disease stabilization on ibrutinib 
monotherapy was 30% in relapsed or relapsed/refractory MM patients with 
a median of 4 prior therapies (range 2-14), we hypothesize that for a 
treatment naïve high risk SMM population, ibrutinib monotherapy will 
stabilize disease progression in most patients and only 10% of patients will 
progress at 1 year. 
 
Using a Simon’s two-stage design, we plan to enroll 15 patients in the first 
stage.  If 4 or more progress, the study will be stopped for futility.  If 12 or 
more responses are observed, an additional 21 patients will be accrued, for a 
total sample size of 36.  The null hypothesis will be rejected if 30 or more 
responses are observed in 36 patients. This design yields a type I error rate 
of 15% and power of 90% when the true response rate is 90%. 
 
 
 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 12 
ABBREVIATIONS 
 
BCR 
BJP 
BM 
BTK 
CLL 
CR 
CRF 
CTX 
B-cell receptor 
Bence Jones protein 
bone marrow 
Bruton’s tyrosine kinase 
chronic lymphocytic leukemia 
complete response 
case report form (paper or electronic as appropriate for this study) 
C-terminal telopeptide 
DCF 
DEXA 
DKK-1 
data clarification form 
bone densitometry  
Dickkopf-1 
DMC 
Data Monitoring Committee 
DSM-IV 
Diagnostic and Statistical Manual of Mental Disorders (4th edition) 
ECG 
Electrocardiogram 
eDC 
FDA 
FEA 
FISH 
electronic data capture 
Food and Drug Administration 
fine element analysis 
fluorescent in situ hybridization 
GCP 
GEP 
Good Clinical Practice 
gene expression profile 
HBsAg 
hepatitis B surface antigen 
HIV 
human immunodeficiency virus 
IAC 
Interim Analysis Committee 
ICF 
informed consent form 
ICH 
International Conference on Harmonisation 
IEC 
IL-6 
IMWG 
Independent Ethics Committee 
interleukin-6 
International Myeloma Working Group 
IRB 
ITK 
Institutional Review Board 
interleukin-2-inducible kinase 
IVRS 
interactive voice response system 
IWRS 
interactive web response system 
LC-MS/MS 
MCL 
liquid chromatography/mass spectrometry/mass spectrometry 
mantle cell lymphoma 
MedDRA 
Medical Dictionary for Regulatory Activities 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 13 
MIP-1α 
MM 
MR 
macrophage inflammatory protein 1α 
multiple myeloma 
minimal response 
MRU 
NTx 
OC 
PC 
medical resource utilization 
N-terminal telopeptide 
osteoclast 
plasma cells 
PD 
Pharmacodynamic 
PK 
Pharmacokinetic 
PQC 
PR 
Product Quality Complaint 
partial response 
PRO 
QCT 
QTc 
RANKL 
sCR 
SD 
SDF-1 
SLL 
SMM 
patient-reported outcome(s) 
quantitative computer tomography scan 
corrected QT interval 
Receptor activator of nuclear factor kappa-B ligand 
stringent complete response 
stable disease 
stromal cell-derived factor-1 
small lymphocytic lymphoma 
smoldering multiple myeloma 
USP 
VGPR 
United States Pharmacopeia 
very good partial remission 
 
 
 
 
 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 14 
1. 
BACKGROUND 
1.1. 
Disease 
Myeloma cells are highly dependent upon the bone marrow microenvironment for their growth 
and survival.  This microenvironment includes cytokines and chemokines (eg, interleukin-6 (IL-
6), vascular endothelial growth factor, basic fibroblast growth factor-2), macromolecules in the 
extracellular matrix, and supportive (stromal) cells.  Adhesion of myeloma cells to bone marrow 
(BM) stromal cells triggers secretion of various cytokines and chemokines which augment 
myeloma cell growth and survival and confers drug resistance.  Additionally, myeloma cells 
stimulate osteoclastogenesis by secretion of various factors, including receptor activator of 
nuclear factor κB ligand (RANKL), IL-6, and macrophage inhibitory protein-1α (MIP-1α).  
Collectively, these interactions contribute to a favorable microenvironment for myeloma cell 
adhesion and proliferation.1-6  
Smoldering multiple myeloma (SMM) is an asymptomatic plasma cell neoplasm that is a 
precursor state of symptomatic multiple myeloma (MM).  It is defined by the presence of a 
serum M-protein ≥ 3 mg/dL or urinary M-protein ≥ 500 mg per 24 hours, and by the absence of 
end-organ damage attributable to plasma cells, myeloma defining events, or amyloidosis.7  SMM 
is associated with a high risk of progression (10% per year, or 73% at 15 years) to MM.  A high 
risk subset of SMM defined by Mayo Clinic criteria as having bone marrow plasma cells 10-60% 
and serum M-protein ≥ 3 g/dL or urine M-protein > 500 mg per 24 hours and serum free light 
chain ratio < 0.126 or > 8 has an even more rapid course, with approximately 50% of patients 
progressing at 2 years and 25% of patients progressing at 1 year.8,9  Given that MM is an 
incurable malignancy with a high morbidity burden, effective approaches to decreasing or 
delaying its development are much needed. 
Recently, an involved to uninvolved sFLC ratio of ≥ 100 was classified as a myeloma defining 
event even in the absence of so called CRAB symptoms (hypercalcemia, renal insufficiency, 
anemia, or lytic bone disease). The current evidence for use of the comes from 3 studies, 2 of 
which have been published.10-12  Two of these studies were relatively small, with sample sizes of 
96 and 126, and all were retrospective.  Two studies were single institution studies, which are 
subject to referral bias, and the third does not specify where patients were recruited from.  
Another recently published study offers conflicting results to the previous 3.  In this study, 
321 patients in the Danish Multiple Myeloma Registry between 2005-2014 were evaluated for 
factors predicting progression.  23 of 321 patients with SMM had a sFLC of > 100.  After 2 years 
of follow-up, only 30% of patients with sFLC > 100 had progressed to myeloma.13  


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 15 
1.1.1. 
None of the studies cited above consider or account for lead time bias, wherein 
patients are stratified by time since initial detection of plasma cell burden.  Most 
importantly, there are no prospective trials which demonstrate that early treatment of 
patients with sFLC ≥ 100 will improve outcomes relative to the current standard of care.  
Given the lack of definitive evidence, there are inadequate data to support the treatment of 
individuals for SMM solely on the basis of a sFLC ≥ 100 alone and therefore this 
population merits inclusion in prospective clinical trials such as the present study. 
1.1.2. 
Current Treatment Options 
The current standard of care for patients with SMM is observation.14  However, there is 
significant interest in examining early intervention, particularly for patients who have high risk 
SMM.  In 2013, Mateos et al reported that the use of lenalidomide and dexamethasone for 9 
cycles followed by lenalidomide maintenance for 24 months was associated with a prolonged 
median time to progression and higher 3-year survival rate.15  In this study, 40% of the patients 
on the placebo arm who progressed to MM did so by virtue of bone disease, suggesting that 
delay or prevention of the onset of bone disease may be a valuable therapeutic target.16  Overall, 
this study provided proof of concept that early intervention in high risk SMM is feasible and 
might impact disease outcome. 
Traditionally, SMM has not been an ideal stage for therapy because patients do not have 
symptoms, and because the therapies for multiple myeloma have considerable toxicities.  Such 
therapies initially consisted of chemotherapy, many of which are alkylating agents, and steroids.  
These agents have significant immediate toxicities as well as potential long term toxicity to the 
bone marrow.  The subsequent introduction of immunomodulatory drugs such as thalidomide, 
lenalidomide, and pomalidomide, and proteasome inhibitors such as bortezomib and carfilzomib, 
has broadened the armamentarium against myeloma.  However, these agents also have 
significant toxicities, raising concern about their use in SMM.  There is an urgent need for 
therapies which are well-tolerated and which have disease-modifying properties for SMM 
patients.17,18 
1.1.3. 
Role of BTK in Disease/Histology 
Bruton’s tyrosine kinase (BTK) is a central mediator of B-cell receptor (BCR) signaling.  B cells 
are lymphocytes with multiple functions in the immune response, including antigen presentation, 
antibody production, and cytokine release.  B-cells express cell surface immunoglobulins 
comprising the BCR, which is activated by binding to antigen.  Antigen binding induces receptor 
aggregation and clustering and activation of multiple tyrosine kinases including BTK, which in 
turn activate further downstream signaling pathways.19  
The process of B-cell maturation, including immunoglobulin chain rearrangement and somatic 
mutation, is tightly regulated.  It is thought that B-cell lymphomas and CLL result from 
mutations and translocations acquired during normal B-cell development.20  Several lines of 
evidence suggest that signaling through the BCR is necessary to sustain the viability of B-cell 
malignancies. 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 16 
In normal plasma cells, BTK is markedly down-regulated.  However, it is highly expressed in the 
malignant cells from many myeloma patients and some cell lines.  Chauhan et al, showed that 
BTK mRNA expression was 2.3-fold increased in 6 MM patient specimens compared to normal 
human marrow precursors.21  Tai et al, noted increased expression in 84% of primary myeloma 
samples and among some cell lines, especially ANBL-6 and INA-6, both of which are IL-6 
dependent.22  Bam et al, reported expression particularly among cases within the MF gene 
expression profile (GEP) grouping, and also commonly in cases within the DC-1, DC-2, HY, and 
LB subgroups.23-25   
1.2. 
Study Rationale 
1.2.1. 
Mechanistic/Pre-clinical 
We hypothesize that ibrutinib has important clinical activity in MM/SMM by: (1) inhibitory 
effects upon osteoclast (OC) function and development resulting in less bone destruction and 
improved bone density, (2) modulation of microenvironmental interactions important for MM 
cell adherence and growth, and (3) reduction of MM repopulating cell growth. 
Recent observations have shown that BTK is important in OC function and development.  Mice 
with X-linked immunodeficiency have monocytic OC precursor cells that are defective in 
multinucleate OC formation in response to RANKL.26  BTK/TEC knockout (KO) mice (but not 
BTK KO mice) have osteopetrotic bones due to defective osteoclast formation.27  Patients with 
X-linked agammaglobulinemia have a similar defect in OC formation in vitro.  This is masked in 
vivo, thought to be due to higher than normal levels of regulatory cytokines.28  Ibrutinib has been 
found to inhibit in vitro the production of human OC from progenitors, as well as cytokine and 
chemokine secretion29.  Erosion of human bone chips by myeloma xenografts in mice with 
severe combined immunodeficiency was inhibited by ibrutinib, as was progression of the tumor 
itself.22 
Ibrutinib has also been shown to inhibit stromal adherence of plasma cells.  Multiple myeloma 
cells, particularly ones with the MF gene expression profile (GEP), are known to be particularly 
dependent upon microenvironmental interactions and integrin β7-based adherence to the bone 
marrow stroma.30  Ibrutinib has been shown to decrease SDF-1 induced migration of MM cells, 
and decrease MIP-1α (a chemokine which has been shown to enhance adhesion of MM and bone 
marrow stromal cells) expression in MM cells.22 
The putative myeloma stem cell or cancer regenerating cell as identified by Matsui was found to 
be enriched in the CD138neg subfraction of both MM patient samples and cell lines.31  This 
functionally defined cell was found to have phenotypic features generally consistent with a 
memory B cell phenotype, including a BCR component and associated marker proteins, and 
small cell lymphoid morphology.  Two groups have independently reported increased BTK 
expression in cell subfractions (CD138neg or CXCR4+) and expect them to be enriched for this 
colony forming population, compared to the bulk population of MM cells.22,23  Consistent with 
this observation, Matsui found ibrutinib to be inhibitory to in vitro colony formation by CD138neg 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 17 
cells (but not growth of CD138+ cells in bulk culture) from 5/5 patient samples tested at 
concentrations as low as 10 nM.32  A selective effect of ibrutinib on the self-renewing 
subpopulation would further explain the difficulty of documenting inhibition of short-term 
cultures of predominantly CD138+ non-fractionated cells.  Such a selective effect could be 
advantageous for clinical use in SMM, as putative stem cells tend to be resistant to conventional 
antineoplastic agents.  
1.2.2. 
Clinical 
In an open-label, phase 2, dose escalation study utilizing ibrutinib as single agent or in 
combination with dexamethasone in patients who were heavily pre-treated (median prior 
therapies = 4), anti-tumor activity was noted.  The group of patients (with n = 20) receiving 
ibrutinib 840 mg daily with dexamethasone 40 mg weekly appeared to have the most benefit, 
with 1 attaining a PR, 4 MRs, and 6 SD.  Other groups receiving ibrutinib as single agent, or 
lower doses of ibrutinib appeared to have benefit as well, with significant numbers of patients 
attaining SD or better.  In this study of heavily pre-treated patients, diarrhea (51%), fatigue 
(41%), nausea (35%), dizziness (25%), and muscle spasms (23%) were the most common Grade 
3 or higher adverse events.  Dose modifications occurred in 22% of patients (out of a total of 69 
as of May 2014), with 6 discontinuing due to an adverse event.  Correlative studies are ongoing 
to identify markers which reflect biologic activity of ibrutinib.33 
Another study (NCT 01962792) is currently examining the combination of ibrutinib with 
carfilzomib in the relapsed or relapsed and refractory setting.  Phase 1 of this study is a dose 
escalation, and phase 2b is a randomized, double-blind, placebo-controlled study to evaluate the 
efficacy of this combination in terms of overall response rate and duration of response.  
Preliminary results reveal an overall response rate of 58% in 36 evaluable patients.  In the best 
responding cohort of patients, who received ibrutinib 840 mg daily and carfilzomib 20 then 
escalated to 36 mg/m2, the overall response rate was 65%, with 3 VGPRs and 1 sCR.34 
1.3. 
Investigational Product Name and Description 
Ibrutinib is a first-in-class, potent, orally administered covalently-binding inhibitor of BTK.  
Inhibition of BTK blocks downstream BCR signaling pathways and thus prevents B-cell 
proliferation.  In vitro, ibrutinib inhibits purified BTK and selected members of the kinase family 
with 10-fold specificity compared with non-BTK kinases.  Ibrutinib (IMBRUVICA®) is 
approved by the U.S. Food and Drug Administration (FDA) for the treatment of: 1) mantle cell 
lymphoma (MCL) in patients who have received at least one prior therapy based on overall 
response rate, 2) chronic lymphocytic leukemia (CLL) in patients who have received at least one 
prior therapy, 3) CLL in patients with 17p deletion, and 4) Waldenström’s macroglobulinemia.  
Ibrutinib is currently under investigation in various other indications. 
Data from study PCYC-04753 demonstrate that although ibrutinib is rapidly eliminated from the 
plasma after oral administration, once daily dosing with ibrutinib is adequate to sustain maximal 
pharmacodynamic activity for 24 hours post-dose at dose levels ≥ 2.5 mg/kg.  In study PCYC-


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 18 
04753, the BTK occupancies for the 2.5 mg/kg/day to 12.5 mg/kg/day cohorts and for the 
560 mg continuous dosing cohort were all above 90% at either 4 or 24 hours after drug 
administration. 
For the most comprehensive nonclinical and clinical information regarding ibrutinib background, 
safety, efficacy, and in vitro and in vivo preclinical activity and toxicology of ibrutinib, refer to 
the latest version of the ibrutinib Investigator's Brochure. 
1.4. 
Summary of Nonclinical Data 
For the most comprehensive nonclinical information regarding ibrutinib, refer to the current 
version of the Investigator's Brochure.  
1.4.1. 
Pharmacology  
Ibrutinib was designed as a selective and covalent inhibitor ofBTK.35  In vitro, ibrutinib is a 
potent inhibitor of BTK activity (IC50 = 0.39 nM).  The irreversible binding of ibrutinib to 
cysteine-481 in the active site of BTK results in sustained inhibition of BTK catalytic activity 
and enhanced selectivity over other kinases that do not contain a cysteine at this position.  When 
added directly to human whole blood, ibrutinib inhibits signal transduction from the B-cell 
receptor and blocks primary B-cell activation (IC50 = 80 nM) as assayed by anti-IgM stimulation 
followed by CD69 expression.36 
Ibrutinib arrested cell growth and induced apoptosis in human B-cell lymphoma cell lines in 
vitro and inhibited tumor growth in vivo in xenograft models.36  Ibrutinib also inhibited adhesion 
and migration of MCL cells in co-culture and reduced tumor burden in lymph node and bone 
marrow in a murine model of MCL dissemination and progression.37 
In multiple myeloma, ibrutinib has been found to be cytotoxic via an inhibitory effect on the 
nuclear factor-kB (NF-kB) pathway.  By blocking the phosphorylation of serine-536 of the p65 
subunit of NF-kB, ibrutinib prevents the nuclear translocation of NF-kB, resulting in down-
regulation of the anti-apoptotic proteins Bcl-xL, FLIP(L) and survivin.38 
1.4.2. 
Toxicology 
In safety pharmacology assessments, no treatment-related effects were observed in the central 
nervous system or respiratory system in rats at any dose tested.  Further, no treatment-related 
corrected QT interval (QTc) prolongation effect was observed at any tested dose in a 
cardiovascular study using telemetry-monitored dogs.   
Based on data from rat and dog including general toxicity studies up to 13 weeks duration, the 
greatest potential for human toxicity with ibrutinib is predicted to be in lymphoid tissues 
(lymphoid depletion) and the gastrointestinal tract (soft feces/diarrhea with or without 
inflammation).  Additional toxicity findings seen in only one species with no observed human 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 19 
correlate in clinical studies to date include pancreatic acinar cell atrophy (rat), minimally 
decreased trabecular and cortical bone (rat) and corneal dystrophy (dog).   
In vitro and in vivo genetic toxicity studies showed that ibrutinib is not genotoxic.  In a rat 
embryo-fetal toxicity study, ibrutinib administration was associated with fetal loss and 
malformations (teratogenicity) at ibrutinib doses that result in approximately 6 times and 
14 times the exposure (AUC) in patients administered the dose of 560 mg daily, respectively. 
1.4.2.1. 
Carcinogenesis, Mutagenesis, Impairment of Fertility 
Carcinogenicity studies have not been conducted with ibrutinib. 
Ibrutinib was not mutagenic in a bacterial mutagenicity (Ames) assay, was not clastogenic in a 
chromosome aberration assay in mammalian (CHO) cells, nor was it clastogenic in an in vivo 
bone marrow micronucleus assay in mice at doses up to 2000 mg/kg. 
Fertility studies with ibrutinib have not been conducted in animals. In the general toxicology 
studies conducted in rats and dogs, orally administered ibrutinib did not result in adverse effects 
on reproductive organs. 
1.5. 
Summary of Clinical Data 
For the most comprehensive clinical information regarding ibrutinib, refer to the current version 
of the Investigator's Brochure.  
1.5.1. 
Pharmacokinetics and Product Metabolism 
Following oral administration of ibrutinib at doses ranging of 420, 560, and 840 mg/day, 
exposure to ibrutinib increased as doses increased with substantial intersubject variability.  The 
mean half life (t1/2) of ibrutinib across 3 clinical studies ranged from 4 to 9 hours, with a median 
time to maximum plasma concentration (Tmax) of 2 hours.  Taking into account the approximate 
doubling in mean systemic exposure when dosed with food and the favorable safety profile, 
ibrutinib can be dosed with or without food. Ibrutinib is extensively metabolized primarily by 
cytochrome P450 (CYP) 3A4. The on-target effects of metabolite PCI-45227 are not considered 
clinically relevant. Steady-state exposure of ibrutinib and PCI-45227 was less than 2-fold of first 
dose exposure. Less than 1% of ibrutinib is excreted renally. Ibrutinib exposure is not altered in 
patients with creatinine clearance (CrCl) >30 mL/min. Patients with severe renal impairment or 
patients on dialysis have not been studied. Following single dose administration, the AUC of 
ibrutinib increased 2.7-, 8.2- and 9.8-fold in subjects with mild (Child-Pugh class A), moderate 
(Child-Pugh class B), and severe (Child-Pugh class C) hepatic impairment compared to subjects 
with normal liver function.  A higher proportion of Grade 3 or higher adverse reactions were 
reported in patients with B-cell malignancies (CLL, MCL and WM) with mild hepatic 
impairment based on NCI organ dysfunction working group (NCI-ODWG) criteria for hepatic 
dysfunction compared to patients with normal hepatic function. 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 20 
1.6. 
Summary of Clinical Safety  
1.6.1. 
Monotherapy Studies 
 
Pooled safety data for a total of 1071 subjects treated with ibrutinib monotherapy from 9 studies 
in B-cell malignancies, which includes subjects from 2 randomized-control studies who crossed 
over from comparator treatment or placebo to receive ibrutinib monotherapy, are summarized 
below.  
Most frequently reported treatment-emergent adverse events (TEAEs) in subjects receiving 
ibrutinib as monotherapy (N=1071): 
Most frequently reported 
TEAEs >10%   
Most frequently reported 
Grade 3 or 4 TEAEs >2%  
Most frequently reported 
Serious TEAEs >1%  
Diarrhea 
Neutropenia 
Pneumonia 
Fatigue 
Pneumonia 
Atrial fibrillation 
Nausea 
Thrombocytopenia 
Febrile neutropenia 
Cough 
Anemia 
Pyrexia 
Anemia 
Hypertension   
 
Pyrexia 
Atrial fibrillation 
 
Neutropenia  
 
 
For more detailed information, refer to the current version of the IB. 
1.6.2. 
Risks 
1.6.2.1. 
Bleeding-related events 
There have been reports of hemorrhagic events in subjects treated with ibrutinib, both with and 
without thrombocytopenia.  These include minor hemorrhagic events such as contusion, 
epistaxis, and petechiae; and major hemorrhagic events, some fatal, including gastrointestinal 
bleeding, intracranial hemorrhage, and hematuria.  Use of ibrutinib in subjects requiring other 
anticoagulants or medications that inhibit platelet function may increase the risk of bleeding.  
Subjects with congenital bleeding diathesis have not been studied.  See Section 6.2.4 for 
guidance on concomitant use of anticoagulants, antiplatelet therapy and/or supplements.  See 
Section 6.4 for guidance on ibrutinib management with surgeries or procedures.   
1.6.2.2. 
Atrial fibrillation  
Atrial fibrillation and atrial flutter have been reported in subjects treated with ibrutinib, 
particularly in subjects with cardiac risk factors, hypertension, acute infections, and a previous 
history of atrial fibrillation.  For atrial fibrillation which persists, consider the risks and benefits 
of ibrutinib treatment and follow the protocol dose modification guidelines (see Section 5.3.1.4). 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 21 
1.6.2.3. 
Diarrhea 
Diarrhea is the most frequently reported non-hematologic AE with ibrutinib monotherapy and 
combination therapy.  Other frequently reported gastrointestinal events include nausea, vomiting, 
and constipation.  These events are rarely severe.  Should symptoms be severe or prolonged 
follow the protocol dose modification guidelines (see Section 5.3.1.4). 
1.6.2.4. 
Infections 
Fatal and non-fatal infections have occurred with ibrutinib therapy.  At least 25% of subjects 
with MCL and 35% of subjects with CLL had Grade 3 or greater infections per NCI Common 
Terminology Criteria for Adverse Events (CTCAE).  The most commonly reported infections 
include pneumonia, cellulitis, urinary tract infection and sepsis.  Although causality has not been 
established, cases of progressive multifocal leukoencephalopathy (PML) have occurred in 
patients treated with ibrutinib. 
1.6.2.5. 
Non-melanoma Skin Cancer 
Non-melanoma skin cancers have occurred in patients treated with ibrutinib.  Monitor patients 
for the appearance of non-melanoma skin cancer. 
1.6.2.6. 
Rash 
Rash has been commonly reported in subjects treated with either single agent ibrutinib or in 
combination with chemotherapy.  In a randomized Phase 3 study (PCYC-1112-CA), rash 
occurred at a higher rate in the ibrutinib arm than in the control arm.  Most rashes were mild to 
moderate in severity.   
1.6.2.7. 
Tumor Lysis Syndrome 
There have been reports of tumor lysis syndrome (TLS) events in subjects treated with single-
agent ibrutinib or in combination with chemotherapy. Subjects at risk of tumor lysis syndrome 
are those with comorbidities and/or risk factors such as high tumor burden prior to treatment, 
increased uric acid (hyperuricemia), elevated lactate dehydrogenase (LDH), bulky disease at 
baseline, and pre‐existing kidney abnormalities 
1.6.2.8. 
Interstitial Lung Disease (ILD) 
Cases of interstitial lung disease (ILD) have been reported in patients treated with ibrutinib. 
Monitor patients for pulmonary symptoms indicative of ILD. Should symptoms develop follow 
the protocol dose modification guidelines (see Section 5.3.1.4). 
1.6.2.9. 
Cytopenias 
Treatment-emergent Grade 3 or 4 cytopenias (neutropenia, thrombocytopenia, and anemia) were 
reported in subjects treated with ibrutinib. 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 22 
1.6.2.10. 
 Lymphocytosis and Leukostasis 
Leukostasis  
There were isolated cases of leukostasis reported in subjects treated with ibrutinib. A high 
number of circulating lymphocytes (>400,000/µL) may confer increased risk. For subject and 
ibrutinib management guidance, refer to Section 5.3.1.5. 
Lymphocytosis 
Upon initiation of treatment, a reversible increase in lymphocyte counts (ie, ≥50% increase from 
baseline and an absolute count >5000/µL), often associated with reduction of lymphadenopathy, 
has been observed in most subjects with CLL/ small lymphocytic lymphoma (SLL) treated with 
ibrutinib. This effect has also been observed in some subjects with MCL treated with ibrutinib. 
This observed lymphocytosis is a pharmacodynamic effect and should not be considered 
progressive disease in the absence of other clinical findings. In both disease types, lymphocytosis 
typically occurs during the first few weeks of ibrutinib therapy (median time 1.1 weeks) and 
typically resolves within a median of 8.0 weeks in subjects with MCL and 18.7 weeks in subjects 
with CLL/SLL.  
A large increase in the number of circulating lymphocytes (eg, >400,000/µL) has been observed 
in some subjects. Lymphocytosis was not commonly observed in subjects with Waldenström’s 
macroglobulinemia treated with ibrutinib. Lymphocytosis appeared to occur in lower incidence 
and at lesser magnitude in subjects with CLL/SLL receiving ibrutinib in combination with 
chemoimmunotherapy. 
 
 
2. 
STUDY OBJECTIVE  
2.1. 
Primary Objective 
To evaluate the proportion of patients with high risk smoldering myeloma who have not 
progressed to symptomatic myeloma by IMWG criteria (except sFLC – a sFLC ratio of ≥ 100 
will not disqualify subjects from enrolling or continuing in the study) after 12 cycles (each 28 
days) of ibrutinib therapy.   
 
2.2. 
Secondary Objectives 
1. Overall response rate, defined as achieving partial response or better per IMWG criteria 
(see Appendix 3) 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 23 
2. Changes in bone density and qCT after 12 cycles of ibrutinib therapy, particularly in 
subjects with osteopenia. 
3. Changes in PET-MRI findings after 12 cycles of ibrutinib therapy, particularly in subjects 
with osteopenia. 
4. Changes in bone related biomarkers in urine and serum after 12 cycles of ibrutinib 
therapy, particularly in subjects with osteopenia. 
5. A separate but companion correlative study will examine possible baseline predictors of 
response as well as alterations associated with ibrutinib therapy at the genomic and 
immunologic levels. 
 
 
3. 
STUDY DESIGN 
3.1. 
Overview of Study Design 
This is a phase 2, open-label, nonrandomized, single center study designed to assess the efficacy 
of ibrutinib in patients with high risk SMM. 
Up to 36 patients with high risk SMM will be enrolled.  All subjects will take ibrutinib at a dose 
of 560 mg (4 capsules of 140 mg each) by mouth once daily for 12 cycles (each 28 days).  If a 
subject demonstrates benefit from ibrutinib, therapy may be extended beyond 12 cycles at the 
previously established safe dose (i.e., typically the dose that the subject is on at the end of Cycle 
12) until disease progression, discontinuation at the discretion of the investigators (for reasons 
specified in Section 5.4) or subject, or the drug is no longer available for investigational 
purposes, or a maximum duration of treatment of 2 years. 
 
3.1.1. 
Study Schema 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 24 
 
3.2. 
Study Design Rationale 
As this is a phase 2 study with the goal of assessing efficacy, all enrolled subjects who meet 
inclusion criteria will be given the study medication. The high risk SMM group is incorporated 
since this is the subgroup most likely to progress to MM, often in the form of bone disease, and 
thus the group in which an intervention is most needed and most likely to be effective 
The primary endpoint – the proportion of patients who remain in SMM and do not progress to 
symptomatic MM will be measured using objective criteria as per the most recent IMWG 
definitions of MM, with the exception of the serum free light chain criteria.7  Given that the 
median time to progression in the high risk SMM patient population is about 2 years, our follow-
up period should provide an indication of treatment effect. 
In an ongoing study of ibrutinib as single agent or in combination with dexamethasone in 
patients with relapsed or relapsed/refractory multiple myeloma, clinical benefit was seen with 
doses of 560 mg and 840 mg daily, and both dosages were well-tolerated overall whether in 
isolation or with dexamethasone.33  
High risk SMM 
n = 36 
Initial cohort (n = 
15): 
Ibrutinib 560 mg 
PO once daily for 12 
cycles 
If 4 or more subjects 
progress, further 
enrollment to cohort 
will cease due to 
futility 
Otherwise, enroll 
additional cohort (n = 
21)  


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 25 
Correlative studies will aim to identify factors that predict for increased response to ibrutinib, 
and characterize changes that occur not only in myeloma cells, but also in the bone marrow 
microenvironment in response to ibrutinib therapy.  Gene expression profiling of CD138+ cells 
has shown prognostic value not only for patients with MM, but also in those with SMM, and this 
value is independent of variables such as M-protein and BM PC percentage.39  We hypothesize 
that ibrutinib may alter the gene expression profile of SMM patients by virtue of the mechanisms 
described in Section 1.2.  GEP assays will be performed on myeloma cells (CD138+) and cells in 
the bone marrow microenvironment (CD138-) to look for alterations.  Additionally, ibrutinib has 
been found to inhibit interleukin-2-inducible kinase (ITK), an essential enzyme in Th2 T cells.  
This action alters the balance between Th1 and Th2 cells and can potentially enhance antitumor 
immune responses.40,41  Immunologic assays to examine Th1/Th2 balance will examine this 
potential alternative mechanism of action. 
 
 
4. 
 SUBJECT SELECTION 
4.1. 
Inclusion Criteria 
To be enrolled in the study, each potential subject must satisfy all of the following inclusion 
criteria. 
Disease Related 
1. High risk SMM, defined as bone marrow plasma cells between 10% and 60%, plus one 
of the following: 
a. High paraprotein burden: Serum M-protein ≥ 3 g/dL [except IgA ≥ 2 g/dL] or urine M-
protein > 500 mg per 24 hours  
b. Moderate paraprotein burden: [(serum m protein < 3 g/dl but > 1 g/dl) or (urine m-protein 
> 200 mg/24h)] AND serum free light chain ratio < 0.126 or > 8 
c. involved to uninvolved free light chain ratio of > 100  
d. abnormal plasma cell phenotype > 95%  and immunoparesis (defined by a reduction 
below the lower limit of normal in 1 or 2 of the uninvolved immunoglobulins)  
e. evolving type of smoldering MM defined as 
i. :⩾10% Increase in serum M-protein and/or involved immunoglobulin level within the first 6 months of 
diagnosis (only if baseline M-protein was ⩾3 g/dl)  
        and/or  
ii. ⩾25% increase in serum M-protein and/or involved immunoglobulin level within the first 12 months of 
diagnosis (for any level of M-protein) plus minimum increase of  0.5 g/dl in M-protein or 500 mg/dl in 
immunoglobulin or both 
f. presence of translocation (4;14) or deletion 17 p  
 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 26 
2. Measurable disease, defined as:  M-protein ≥ 1 g/dL OR Bence-Jones protein (BJP) > 
200 mg/24 hr OR involved free light chain > 100 mg/dL 
3. Diagnosed with SMM within the last 4 years 
Laboratory 
1. Adequate hematologic function independent of transfusion and growth factor support for 
at least 7 days prior to screening, with the exception of pegylated G-CSF (pegfilgrastim) 
and darbopoeitin which require at least 14 days prior to screening defined as:  
o    Absolute neutrophil count > 750 cells/mm3 (1.0 x 109/L).   
o Platelet count > 75,000 cells/mm3 (75 x 109/L).   
2. Adequate hepatic and renal function defined as: 
o Serum aspartate transaminase (AST) and alanine transaminase (ALT) 
≤ 3.0 x upper limit of normal (ULN). 
o Estimated creatinine clearance ≥ 30 ml/min (Cockcroft-Gault) 
o Bilirubin ≤1.5 x ULN (unless bilirubin rise is due to Gilbert’s syndrome or of 
non-hepatic origin, in which case the total bilirubin should be < 3 x ULN) 
3. PT/INR < 1.5 x ULN and PTT (aPTT) < 1.5 x ULN 
Demographic 
4. Men and women ≥ 18 years of age 
5. Eastern Cooperative Oncology Group (ECOG) performance status of < 2 
Ethical/Other 
6. Female subjects who are of non-reproductive potential (ie, post-menopausal by history - 
no menses for ≥ 1 year; OR history of hysterectomy; OR history of bilateral tubal 
ligation; OR history of bilateral oophorectomy).  Female subjects of childbearing 
potential must have a negative serum pregnancy test upon study entry. 
7. Male and female subjects must agree to use highly effective methods of birth control (eg, 
condoms, implants, injectables, combined oral contraceptives, some intrauterine devices 
[IUDs], sexual abstinence, or sterilized partner) during the period of therapy and for 30 
days after the last dose of study drug. 
4.2. 
Exclusion Criteria 
To be enrolled in the study, potential subjects must meet NONE of the following: 
Disease-Related 
1. No end organ damage attributable to a plasma cell disorder, defined as having ANY of 
the following: 
a. Hypercalcemia:  Serum calcium > 1 mg/dL above the upper limit of normal or > 11 
mg/dL 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 27 
b. Renal insufficiency:  Serum creatinine > 2 mg/dL or creatinine clearance < 30 mL per 
min 
c. Anemia:  Hemoglobin value > 2 g/dL below the upper limit of normal or a hemoglobin 
value < 10 g/dL 
d. Bone lesions:  One or more lytic lesions on skeletal radiography, CT, MRI, PET-CT, or 
PET-MRI 
2. Bone marrow plasma cells < 10% or > 60% 
3. Has received prior anti-myeloma therapy of any type 
4. Has received prior bisphosphonate therapy 
5. Osteoporosis, defined as T-score less than -2.5 
6. On warfarin therapy or other vitamin K antagonists within 7 days of treatment initiation 
7. Requires treatment with a strong cytochrome P450 (CYP) 3A inhibitors or inducer (see 
Appendix 3) 
8. Has received an investigational drug, investigational vaccine, or has used an 
investigational medical device within 4 weeks or 4 half-lives, whichever is longer, before 
Cycle 1, Day 1 of study therapy 
Concurrent Conditions 
1. History of other malignancies, except:  
• Malignancy treated with curative intent and with no known active disease present for 
≥ 3 years before the first dose of study drug and felt to be at low risk for recurrence 
by treating physician 
• Adequately treated non-melanoma skin cancer or lentigo maligna without evidence of 
disease 
• Adequately treated carcinoma in situ without evidence of disease 
2. Concurrent systemic immunosuppressant therapy (eg, cyclosporine A, tacrolimus, etc).  
Any use of corticosteroids EITHER for > 14 days OR at dosages > 20 mg/day of 
prednisone or equivalent is prohibited.  
3. Vaccinated with live, attenuated vaccines within 4 weeks of first dose of study drug 
4. Recent infection requiring systemic treatment that was completed ≤ 14 days before the 
first dose of study drug 
5. Known bleeding disorders (eg, von Willebrand’s disease) or hemophilia 
6. History of stroke or intracranial hemorrhage within 6 months prior to enrollment 
7. Known HIV, HCV or HBV infection.  Subjects who are positive for hepatitis B core 
antibody or hepatitis B surface antigen must have a negative polymerase chain reaction 
(PCR) result before enrollment.  Those who are PCR positive will be excluded. 
8. Any uncontrolled active systemic infection 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 28 
9. Major surgery within 4 weeks of first dose of study drug 
10. Any life-threatening illness, medical condition, or organ system dysfunction that, in the 
investigators’ opinion, could compromise the subject’s safety or put the study outcomes 
at undue risk 
11. Currently active, clinically significant cardiovascular disease, such as uncontrolled 
arrhythmia or Class 3 or 4 congestive heart failure as defined by the New York Heart 
Association Functional Classification; or a history of myocardial infarction, unstable 
angina, or acute coronary syndrome within 6 months prior to start of first study treatment 
12. Currently active, clinically significant hepatic impairment Child-Pugh class B or C 
according to the Child Pugh classification [Appendix 6] 
13. Unable to swallow capsules, malabsorption syndrome, prior resection of the stomach or 
small bowel, symptomatic inflammatory bowel disease or ulcerative colitis, partial or 
complete bowel obstruction, or any other disease significantly affecting gastrointestinal 
function 
14. Lactating or pregnant 
15. Unwilling or unable to participate in all required study evaluations and procedures 
16. Unable to understand the purpose and risks of the study and to provide a signed and dated 
informed consent form (ICF) and authorization to use protected health information (in 
accordance with national and local subject privacy regulations) 
 
 
5. 
TREATMENT OF SUBJECTS  
5.1. 
Treatment allocation 
This is an open-label study.  Subjects will not be blinded to the study drug.  All enrolled subjects 
will receive open-label ibrutinib capsules. 
5.2. 
Study treatment 
5.2.1. 
Route and schedule 
Ibrutinib 560 mg once daily by mouth, given in capsules of 140 mg each.   


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 29 
5.3. 
Study Medications 
5.3.1. 
Ibrutinib 
5.3.1.1. 
Formulation/Packaging/Storage  
Ibrutinib will be provided by Pharmacyclics for this study.  It is provided as hard gelatin 
capsules, each containing 140 mg of ibrutinib.  All formulation excipients are compendial and 
are commonly used in oral formulations.  Refer to the ibrutinib Investigator's Brochure for a list 
of excipients.  
Ibrutinib capsules will be packaged in opaque high-density polyethylene plastic bottles with 
labels bearing information meeting applicable regulatory requirements.  All study drug will be 
dispensed in child-resistant packaging.  Ibrutinib will be dispensed in 30-day supplies during the 
first 4 cycles of the study.  Thereafter, ibrutinib will be dispensed in 90-day supplies, since 
subject follow-up from that point onward is conducted in approximately 90-day intervals. 
Refer to the site pharmacy manual and Investigator’s Brochure for additional guidance on study 
drug storage, preparation and handling. 
5.3.1.2. 
Dose and Administration  
Ibrutinib is administered orally once daily.  The capsules are to be taken around the same time 
each day with 8 ounces (approximately 240 mL) of water.  The capsules should be swallowed 
intact and subjects should not attempt to open capsules or dissolve them in water.  The use of 
strong CYP3A inhibitors/inducers, and grapefruit and Seville oranges should be avoided for the 
duration of the study (Appendix 2). 
To be eligible for treatment with ibrutinib whether at study initiation or at subsequent cycles, 
subjects must meet all laboratory criteria as listed in Section 4.1 and not meet any of the criteria 
for ibrutinib dose hold or modification per Section 5.3.1.4. 
If a dose is not taken at the scheduled time, it can be taken as soon as possible on the same day 
with a return to the normal schedule the following day.  The subject should not take extra 
capsules to make up the missed dose. 
The first dose will be delivered in the clinic on Day 1, after which subsequent dosing is typically 
on an outpatient basis.  Ibrutinib will be dispensed to subjects in bottles at each visit.  Unused 
ibrutinib dispensed during previous visits must be returned to the site and drug accountability 
records (Section 12.8) updated at each visit.  Returned capsules must not be re-dispensed to 
anyone.  Subjects will be required to maintain a dose diary, which will be provided (Appendix 
4). 
Duration of treatment is 12 cycles, each 28 days long.  If a subject demonstrates benefit from 
ibrutinib, therapy may be extended beyond this duration at the established safe dose (i.e., 
typically the dose that the subject is on at the end of Cycle 12) until disease progression, 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 30 
discontinuation by the investigators (for reasons listed in Section 5.4) or subject, or the drug is no 
longer available for investigational purposes, or a maximum during of 2 years from the 
beginning of therapy. 
5.3.1.3. 
Overdose 
Any dose of study drug in excess of that specified in this protocol is considered to be an 
overdose.  Signs and symptoms of an overdose that meet any Serious Adverse Event criterion 
must be reported as a Serious Adverse Event in the appropriate time frame and documented as 
clinical sequelae to an overdose.   
There is no specific experience in the management of ibrutinib overdose in patients. No 
maximum tolerated dose (MTD) was reached in the Phase 1 study in which subjects received up 
to 12.5 mg/kg/day (1400 mg/day). Healthy subjects were exposed up to single dose of 1680 mg. 
One healthy subject experienced reversible Grade 4 hepatic enzyme increases (AST and ALT) 
after a dose of 1680 mg. Subjects who ingested more than the recommended dosage should be 
closely monitored and given appropriate supportive treatment. 
Refer to Section 11 for further information regarding AE reporting. 
5.3.1.4. 
Dose Modification of Ibrutinib for Adverse Reactions 
The dose of study drug should be modified according to the dose modification guidelines in 
Table 1 if any of the following toxicities occur: 
o Grade 4 ANC (< 500/µL) for more than 7 days.  Neutrophil growth factors are permitted.  
o Grade 3 thrombocytopenia (< 50,000/µL) in the presence of clinically significant 
bleeding events 
o Grade 4 thrombocytopenia (< 25,000/µL) 
o Grade 3 or 4 nausea, vomiting, or diarrhea if persistent, despite optimal anti-emetic 
and/or anti-diarrheal therapy 
o Grade 3 or greater renal impairment OR creatinine clearance <30 mL/min 
o Grade 2 or greater AST, ALT or total bilirubin level elevation in patients who had normal 
values at the time of study entry 
o For subjects who develop mild hepatic impairment (Child-Pugh class A) or worse, follow 
the dosing guidance in Section 5.3.1.5  
o Any other Grade 4 or unmanageable Grade 3 toxicity 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 31 
For Grade 3 or 4 atrial fibrillation or persistent atrial fibrillation of any grade, consider the risks 
and benefits of ibrutinib treatment.  Anticoagulants (excluding warfarin) or antiplatelet agents 
may be considered for the thromboprophylaxis of atrial fibrillation (refer to Section 6.2.4). 
Table 1. Ibrutinib Dose Modifications 
Occurrence Action to be Taken  
First 
Withhold study drug until recovery to Grade ≤ 1 or baseline; may restart at 1 
dose level lower (ie, decrease dose by 140 mg/day) 
Second 
Withhold study drug until recovery to Grade ≤ 1 or baseline; may restart at 1 
dose level lower from dose at first occurrence (ie, decrease dose by another 140 
mg/day) 
Third 
Discontinue study drug 
 
If complete resolution or improvement of the toxicity to Grade 1 or to baseline values is achieved 
within 28 days, the investigators may elect to have the subject restart treatment with study drug.  
If the toxicity takes more than 28 days to resolve, permanently discontinue study drug.  Upon 
restarting treatment with study drug, follow the dose modifications for study drug according to 
Table 1. 
5.3.1.5. 
Dose Modification for Hepatic Impaired Subjects 
Ibrutinib is metabolized in the liver and therefore subjects with clinically significant hepatic 
impairment at the time of screening (Child-Pugh class B or C) are excluded from study 
participation.  For subjects who develop mild liver impairment while on study (Child-Pugh class 
A), the recommended dose reduction for ibrutinib is to a level of 280 mg daily (two capsules).  
For subjects who develop moderate liver impairment while on study (Child-Pugh class B), the 
recommended dose reduction is to a level of 140 mg daily (one capsule).  Subjects who develop 
severe hepatic impairment (Child-Pugh class C) must hold study drug until resolved to moderate 
impairment (Child-Pugh class B) or better.  Monitor subjects for signs of toxicity and follow 
dose modification guidance above as needed.  
5.4. 
Criteria for Permanent Discontinuation of Study Drug 
The investigators will attempt to keep a subject who is experiencing clinical benefit (refer to 
Section 7) in the study unless significant toxicity puts the subject at risk, or routine 
noncompliance puts the study outcomes at risk.  If the subject meets any of the following criteria, 
then withdrawal from the study treatment is mandatory: 
o Subject has confirmed progression to MM defined as having any of the following: 
o Hypercalcemia:  Serum calcium > 1 mg/dL above the upper limit of normal or > 
11 mg/dL 
o Renal insufficiency:  Serum creatinine > 2 mg/dL or creatinine clearance < 30 mL 
per min 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 32 
o Anemia:  Hemoglobin value > 2 g/dL below the upper limit of normal or a 
hemoglobin value < 10 g/dL 
o Bone lesions:  One or more lytic lesions on skeletal radiography, CT, MRI, PET-
CT, or PET-MRI 
o ≥ 60% bone marrow plasma cells 
o Note that an increase in the involved: uninvolved FLCR to ≥ 100 will not be 
considered disease progression, in the absence of the above findings  
o Subject has an intercurrent illness or AE that prevents further ibrutinib capsule 
administration 
o Subject decides to withdraw from study 
o Subject becomes pregnant 
o Subject is noncompliant with study procedures and/or scheduled evaluations 
o Subject requires a prohibited concomitant medication or bone marrow transplant 
o Investigator considers withdrawal to be in the best interest of the subject 
o Pharmacyclics requires that the subject withdraw 
o Regulatory authorities terminate the study 
o Subject completes the study (although as per Section 5.3.1.2 subjects who benefit from 
study treatment may receive additional supply until disease progression or a maximum of 
2 years of treatment) 
Subjects who withdraw for any reason after receiving the first dose of ibrutinib will not be 
replaced.  Subjects who withdraw prior to the first dose of ibrutinib may be replaced. 
 
 
6. 
CONCOMITANT MEDICATIONS/PROCEDURES 
6.1. 
Permitted Concomitant Medications 
Supportive medications in accordance with standard practice (such as for emesis, diarrhea, etc.) 
are permitted.  Transfusions may be given in accordance with institutional policy.  
Short courses (≤ 14 days) of steroid treatment for non-cancer related medical reasons (eg, joint 
inflammation, asthma exacerbation, rash, antiemetic use and medication reactions) at doses that 
do not exceed 20 mg per day of prednisone or equivalent are permitted. 
6.2. 
Medications to be Used with Caution 
6.2.1. 
CYP3A- Inhibitors/Inducers 
Ibrutinib is metabolized primarily by CYP3A. Avoid co-administration with strong CYP3A4 or 
moderate CYP3A inhibitors and consider alternative agents with less CYP3A inhibition. 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 33 
• If a strong CYP3A inhibitor (eg, ketoconazole, indinavir, nelfinavir, ritonavir, saquinavir, 
clarithromycin, telithromycin, itraconazole, nefazadone, or cobicistat) must be used, reduce 
ibrutinib dose to 140 mg or withhold treatment for the duration of inhibitor use. Subjects 
should be monitored for signs of ibrutinib toxicity.  
• If a moderate CYP3A inhibitor (eg, voriconazole, erythromycin, amprenavir, aprepitant, 
atazanavir, ciprofloxacin, crizotinib, darunavir/ritonavir, diltiazem, fluconazole, 
fosamprenavir, imatinib, verapamil, amiodarone, or dronedarone) must be used, reduce 
ibrutinib to 140 mg (for 840 mg/day dose, reduce to 280 mg) for the duration of the 
inhibitor use. Avoid grapefruit and Seville oranges during ibrutinib/placebo treatment, as 
these contain moderate inhibitors of CYP3A (see Section 5.3.1.2). 
• No dose adjustment is required in combination with mild inhibitors.  
Avoid concomitant use of strong CYP3A inducers (eg, carbamazepine, rifampin, phenytoin, and 
St. John’s Wort). Consider alternative agents with less CYP3A induction. 
A list of common CYP3A inhibitors and inducers is provided in Appendix 3.  A comprehensive 
list of inhibitors, inducers, and substrates may be found at 
http://medicine.iupui.edu/clinpharm/ddis/main-table/. This website is continually revised and 
should be checked frequently for updates. 
For the most comprehensive effect of CYP3A inhibitors or inducers on ibrutinib exposure, please 
refer to the current version of the IB. 
6.2.2. 
QT Prolonging Agents 
Any medications known to cause QT prolongation should be used with caution; periodic ECG 
and electrolyte monitoring should be considered.  
6.2.3. 
Antiplatelet Agents and Anticoagulants 
Warfarin or vitamin K antagonists should not be administered concomitantly with ibrutinib.  
Supplements such as fish oil and vitamin E preparations should be avoided.  Use ibrutinib with 
caution in subjects requiring other anticoagulants or medications that inhibit platelet function.   
Subjects with congenital bleeding diathesis have not been studied.  For guidance on ibrutinib and 
the use of anticoagulants during procedures/surgeries, see Section 6.4. 
Subjects requiring the initiation of therapeutic anticoagulation therapy (eg, atrial fibrillation) 
should consider the risks and benefits of continuing ibrutinib treatment.  If therapeutic 
anticoagulation is clinically indicated, treatment with ibrutinib should be held and not be 
restarted until the subject is clinically stable and has no signs of bleeding.  Subjects should be 
observed closely for signs and symptoms of bleeding.  No dose reduction is required when study 
drug is restarted. 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 34 
6.3. 
Prohibited Concomitant Medications 
Any nonstudy protocol related chemotherapy, anticancer immunotherapy, experimental therapy, 
or radiotherapy are prohibited while the subject is receiving ibrutinib treatment. 
Corticosteroids for > 14 days or at doses > 20 mg/day of prednisone or equivalent are prohibited.   
6.4. 
Guidelines for Ibrutinib Management with Surgeries or Procedures 
Ibrutinib may increase risk of bleeding with invasive procedures or surgery.  The following 
guidance should be applied to the use of ibrutinib in the perioperative period for subjects who 
require surgical intervention or an invasive procedure while receiving ibrutinib. 
6.4.1. 
Minor Surgical Procedures 
For minor procedures (such as a central line placement, needle biopsy, thoracentesis, or 
paracentesis), ibrutinib should be held for at least 3 days prior to the procedure and should not be 
restarted for at least 3 days after the procedure.  For bone marrow biopsies that are performed 
while the subject is on ibrutinib, it is not necessary to hold ibrutinib for these procedures.   
6.4.2. 
Major Surgical Procedures 
For any surgery or invasive procedure requiring sutures or staples for closure, ibrutinib should be 
held at least 7 days prior to the intervention and should be held at least 7 days after the 
procedure.  It should be restarted at the discretion of the investigator when the surgical site is 
reasonably healed without serosanguinous drainage or the need for drainage tubes.  
6.4.3. 
Emergency Procedures 
For emergency procedures, ibrutinib should be held after the procedure until the surgical site is 
reasonably healed, or for at least 7 days after the urgent surgical procedure, whichever is longer. 
 
 
7. 
STUDY EVALUATIONS  
7.1. 
Description of Procedures 
The Schedule of Assessments is provided in Appendix 1.  Descriptions of the scheduled 
evaluations are outlined below and complete information on study drug and dosing is provided in 
Section 5.  Before study entry, throughout the study, and at the follow-up evaluations, various 
clinical and diagnostic evaluations will be performed.  The purpose of obtaining these detailed 
measurements is to ensure adequate safety and tolerability, and to assess treatment response.  


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 35 
Any of the clinical evaluations and laboratory studies below may be repeated more frequently if 
clinically indicated. 
7.1.1. 
Physical Examination, Height and Weight 
All physical examination will include, at a minimum, the general appearance of the subject, 
height (screening only) and weight, and examination of the skin, eyes, ears, nose, throat, lungs, 
heart, abdomen, extremities, musculoskeletal system, nervous system, and lymphatic system. 
7.1.2. 
Vital Signs 
Vital signs will include blood pressure, heart rate, respiratory rate, and body temperature and will 
be assessed after the subject has been resting in the sitting position for at least 3 minutes.  
7.1.3. 
Eastern Cooperative Oncology Group (ECOG) Performance Status 
The ECOG Performance Status is provided in Appendix 6. 
7.1.4. 
Laboratories 
All studies are to be performed at the local laboratory (Mount Sinai) unless otherwise indicated. 
7.1.4.1. 
CBC with differential 
Parameters will include white blood cells, red blood cells, hemoglobin, hematocrit, platelets, 
neutrophils, lymphocytes, monocytes, eosinophils, basophils and bands (if reported).  These 
parameters will be checked as outlined in the Schedule of Assessments and as clinically 
indicated. 
7.1.4.2. 
Serum chemistries 
These will include sodium, potassium, chloride, bicarbonate, blood urea nitrogen (BUN), 
creatinine, glucose, calcium, total protein, albumin, total protein, AST, ALT, alkaline 
phosphatase, total bilirubin.  These studies will be checked as outlined in the Schedule of 
Assessments and as clinically indicated.  Additionally, lactate dehydrogenase (LDH), 
phosphorous, magnesium, and uric acid will be checked at Screening, and will not be repeated 
unless abnormal.  
7.1.4.3. 
Coagulation studies 
Measurement of prothrombin time, international normalized ratio, and activated partial 
thromboplastin time will be performed at Screening.  They will be repeated at Cycle 2 to ensure 
stability.  
7.1.4.4. 
Urinalysis 
This is to be checked at Screening and includes pH, ketones, specific gravity, bilirubin, protein, 
blood, and glucose. 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 36 
7.1.4.5. 
Pregnancy Test 
Pregnancy testing (urine or serum) is required at Screening for women of childbearing potential.  
If positive, pregnancy must be ruled out by ultrasound to be eligible.  This test is to be repeated 
as per the Schedule of Assessments and as clinically indicated for women of childbearing 
potential. 
7.1.4.6. 
Serum and Urine Protein Electrophoresis 
Samples will be collected at Screening, and prior to study treatment administration on Day 1 of 
Cycle 1.  Additional sample collection per Section 8.2. 
7.1.4.7. 
Serum Free Light Chain Assay 
Samples will be collected at Screening, and prior to study treatment administration on Day 1 of 
Cycle 1.  Additional sample collection per Section 8.2. 
7.1.4.8. 
Serum and Urine Immunofixation  
Samples will be collected at Screening, and prior to study treatment administration on Day 1 of 
Cycle 1.  Additional sample collection per Section 8.2. 
7.1.4.9. 
Quantitative Serum Immunoglobulins (IgA, IgG, IgM)  
Samples will be collected on Screening, and prior to study treatment administration on Day 1 of 
Cycle 1.  Additional sample collection per Section 8.2. 
7.1.4.10. 
Serum β2-microglobulin  
Samples will be collected at Screening and at End of Treatment. 
7.1.4.11. 
25-hydroxy vitamin D  
Samples will be collected at Screening and at End of Treatment. 
7.1.4.12. 
Biomarkers 
Biomarkers (serum CTX, urinary NTx, serum DKK-1, serum RANKL, serum MIP-1α, serum 
SDF-1) of bone metabolism and myeloma disease activity (IL-6) will be tested.  Blood and 
urine samples will be collected on Cycle 1 Day 1, Cycle 7 Day 1, at every subsequent 24 weeks 
for subjects who continue on study, and at End of Treatment.  Serum CTX and urinary NTx will 
be sent to Quest Diagnostics for analysis.  The remaining specimens will be sent to 
Pharmacyclics. 
7.1.4.13. 
Genomic and immunologic correlatives 
Serum and bone marrow (6 mL each) will be collected and stored for genomic and 
immunologic correlative studies.  Specimen collection will be performed on Screening, Day 1 
of Cycle 7, and at End of Treatment.  These samples may be characterized by technologies such 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 37 
as gene expression profiling, targeted sequencing for genomic alterations, and intracellular 
signaling pathway analysis.  Inhibition of BTK and other related kinases may also be explored.  
These efforts may identify genes and pathways associated with primary or later development of 
resistance to ibrutinib and potentially identify biomarkers that could assist with future 
development of this compound.  Pharmacodynamic assays, ie, BTK occupancy, may be 
performed to correlate results of biomarker assessments to the physiological effects of ibrutinib. 
7.1.5. 
Diagnostics/Procedures 
7.1.5.1. 
Electrocardiogram (ECG) 
A 12-lead electrocardiogram (ECG) will be performed at Screening.  It may be repeated at any 
subsequent time during the study, as determined necessary by the investigators.  Subjects should 
rest in a supine position before ECG collection and should refrain from talking or moving arms 
or legs.  
7.1.5.2. 
Bone marrow aspiration and biopsy 
A unilateral bone marrow aspirate and biopsy will be obtained at Screening, at Cycle 13 Day 1, 
and at the End of Treatment.  Specimens will be submitted to the Mount Sinai Department of 
Pathology laboratory to determine bone marrow involvement and evaluate morphology.  
Fluorescent in situ hybridization (FISH) will be performed to allow for identification of 
abnormalities such as t(4;14), t(11;14) and del 17p.  An additional 6 mL of bone marrow 
aspirate will be collected for genomic and immunologic assessments (refer to Section 7.1.4.13). 
7.1.5.3. 
Bone radiological assessment 
A radiologic skeletal survey, PET-MRI, DEXA scan, and qCT with FEA are required at 
Screening.  PET-MRI, DEXA, and qCT are to be repeated at End of Treatment.  A skeletal 
survey includes a lateral radiograph of the skull, antero-posterior and lateral views of the spine, 
and antero-posterior views of the pelvis, ribs, femora, and humeri.  Bone radiological 
assessments are to be done within 42 days of Screening.  Additional imaging can be performed 
as clinically indicated at any time during the study, as determined necessary by the 
investigators. 
7.2. 
Efficacy Evaluations  
Efficacy evaluations will be conducted at the beginning of Cycles 4, 7, 10, and every 3 months 
thereafter for subjects who do not progress to myeloma, and at End of Treatment.  Response 
assessments will be made using IMWG response criteria (refer to Appendix 3). 
All Screening, Cycle 1 Day 1 and End of Treatment assessments will include quantitative 
immunoglobulins, serum and urine electrophoresis, serum and urine immunofixation, and serum 
free light chain assay.  Other assessments may entail more limited testing, in that only the 
parameters that are required for a particular response category will be assessed.  If at any time 
CR is suspected, all assessments including serum, urine, radiographic imaging (if applicable) and 
bone marrow biopsy must be performed as per the IMWG response assessment guidelines. 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 38 
1. 
If SPEP and UPEP both meet criteria, both will be performed at assessment.  
2. 
If only SPEP meets criteria, then only SPEP will be required at each assessment. 
3. 
If only UPEP meets criteria, then only UPEP will be required at each assessment. 
4. 
If neither SPEP nor UPEP meet criteria, then only sFLC assay will be required at each 
assessment. 
At the investigators’ discretion, additional evaluations may be performed but they are not to be 
used for response assessment. 
7.2.1. 
Survival and subsequent anticancer therapies 
7.2.1.1. 
Survival  
After disease progression, subjects will be contacted to assess survival status every 12 weeks (± 
14 days) from End of Treatment visit until death, subject withdrawal of full consent, subject 
loss to follow-up, study termination by investigator, or 3 years after the last subject is enrolled, 
whichever comes first.  At the time of the analysis and at study closure, a survival sweep will be 
conducted.  All subjects who are not known to have died or withdrawn consent prior to the 
survival sweep will be contacted at that time.  
7.2.1.2. 
Subsequent Anticancer Therapies  
After study treatment is complete, the following information on subsequent anticancer therapies 
will be collected every 12 weeks (± 14 days) from End of Treatment Visit until death, subject 
withdrawal of full consent, subject loss to follow-up, study termination by investigator, or until 
3 years after the last subject is enrolled, whichever comes first:  
o Receipt of subsequent anticancer therapies  
o Indication for initiation of subsequent anticancer therapy  
o Response to subsequent anticancer therapies 
7.3. 
Sample Collection and Handling 
The actual dates and times of sample collection must be recorded in source documents for 
transcription to the CRF or laboratory requisition form.  Refer to the Schedule of Assessments 
(Appendix 1) for the timing and frequency of all sample collections. 
Instructions for the collection, handling, and shipment of samples are found in the laboratory 
manual that will be provided for sample collection and handling.  
 
 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 39 
8. 
STUDY PROCEDURES 
All laboratory and radiographic testing is to be performed at Mount Sinai unless otherwise noted. 
8.1. 
Screening Phase 
All routine laboratory and clinical screening assessments must be performed within 28 days 
before the first administration of study drug.  A longer window of 42 days is allowed for bone 
marrow and radiologic studies.  All study-specific assessments that are not part of standard-of-
care must be done after subjects sign the ICF.  The following are required: 
Confirmation of Eligibility: Perform all necessary procedures and evaluations to document that 
the subject meets each eligibility criterion (refer to Section 4).  De-identified copies of 
measurable disease as documented by SPEP, serum FLC and UPEP is required prior to 
enrollment.  SMM diagnosis will be confirmed and documented.42  
Medical History: The subject’s complete medical history will be collected and recorded through 
review of medical records and by interview.  Concurrent medical signs and symptoms must be 
documented to establish baseline severities. 
Concomitant Medications and Therapy: All concomitant medications and procedures will be 
collected and recorded prior to the start of study drug. 
Physical Examination, Vital Signs, Height, and Weight: The screening physical examination 
(PE) will include, at a minimum, the general appearance of the subject, height (Screening only) 
and weight, and examination of the skin, eyes, ears, nose, throat, lungs, heart, abdomen, 
extremities, musculoskeletal system, nervous system, and lymphatic system.  Vital signs (blood 
pressure, heart rate, respiratory rate, and body temperature) will be assessed. 
ECOG Performance Status: The ECOG index is provided in Appendix 6. 
Electrocardiogram: Subjects should be in the supine position when this is performed. 
Bone Marrow Aspirate and Biopsy: A unilateral bone marrow aspirate and biopsy 
documenting percent marrow involvement by plasma cells will be done at Screening.  Part of the 
aspirate will be sent for flow cytometry, FISH, and cytogenetic studies.  Flow cytometry should 
include immunophenotyping for SMM risk stratification.  Specimens will be reviewed by a 
pathologist at Mount Sinai. 
Other Laboratory Tests: Hematology and serum chemistry are part of the screening procedures 
to ensure eligibility.  For a description of these tests, refer to Section 7.1.4. 
Urinalysis: Includes pH, ketones, specific gravity, bilirubin, protein, blood, and glucose. 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 40 
Pregnancy Test: Required only for women of childbearing potential.  Can be performed using 
either serum or urine.  If positive, pregnancy must be ruled out by ultrasound to be eligible for 
participation in the study. 
Coagulation Studies: Measurement of PT, INR, and aPTT are part of the screening procedures.   
Bone Radiological Assessment: A radiologic skeletal survey, PET-MRI, DEXA scan, and QCT 
with FEA are required.  Bone radiological assessment includes a lateral radiograph of the skull, 
antero-posterior and lateral views of the spine, and antero-posterior views of the pelvis, ribs, 
femora, and humeri.  QCT with FEA should cover the same body areas as well.  Bone 
radiological assessments are to be done within 42 days of Screening. 
Myeloma Specific Tests: Include serum and urine protein electrophoresis, quantitative 
immunoglobulins, serum free light chain assay, serum and urine immunofixation, and β2-
microglobulin.  For a description of these tests, refer to Section 7.1. 
8.2. 
Treatment Phase 
Each cycle is defined as 28 days of continuous therapy with ibrutinib.  Study visits will occur on 
Cycle 1 Day 1 and thereafter on Day 1 (±3 days) of Cycles 2, 3, 4, 7, 10.  For subjects who 
continue receiving ibrutinib beyond Cycle 12, study visits will continue to occur every 3 cycles 
(ie, Cycle 13, 16, 19, etc) until therapy is stopped, at which point the End of Treatment visit will 
occur.  Refer to the Schedule of Assessments (Appendix 1) for a complete list of procedures 
performed at each of the scheduled study visits. 
Concomitant Medications and Therapy: Concomitant medications and therapy will be 
recorded at each visit.  Refer to Section 6 for a listing of permitted medications. 
Adverse Events: The definition for an AE is provided in Section 11.1.  All medical occurrences 
from the time of the first administration of study drug that meet this definition must be recorded.  
Important additional requirements for reporting SAEs are included in Section 11.3.  AEs will be 
recorded at each visit, or as they occur during the treatment period. 
Physical Examination, Vital Signs, and Weight: Symptom-directed physical exams will be 
performed during the treatment period.  Vital signs and weight will be measured and recorded at 
each study visit. 
ECOG Performance Status: The ECOG performance status will be measured and recorded at 
each study visit.  The ECOG index is provided in Appendix 2. 
Bone Marrow Aspirate and Biopsy: A unilateral bone marrow aspirate and biopsy 
documenting percent marrow involvement will be repeated on Cycle 7 Day 1, at End of 
Treatment, and additionally at the discretion of the investigator.  There is a window of ± 14 days 
at each of these time points for performing the procedure.  Part of the aspirate will be sent for 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 41 
flow cytometry, FISH, and cytogenetic studies.  Flow cytometry should include 
immunophenotyping for SMM risk stratification.   
Hematology: Hematology parameters will be measured on Day 1 of Cycles 1, 2, 3, 4, 7, and 10.  
For subjects who continue receiving ibrutinib beyond Cycle 12, labs will continue to occur every 
3 cycles (ie, Cycle 13, 16, 19, etc.) until therapy is stopped, at which point an End of Treatment 
collection will occur.  Specimens can be collected additionally as felt clinically indicated by the 
investigators.  Hematology parameters must include complete blood count (CBC) with 
differential and platelet counts. 
Serum Chemistries: Chemistry parameters include albumin, alkaline phosphatase, ALT, AST, 
bicarbonate, blood urea nitrogen, calcium, chloride, creatinine, glucose, potassium, sodium, total 
bilirubin, and total protein.  Serum chemistry parameters will be measured on Day 1 of Cycles 1, 
2, 3, 4, 7, and 10.  For subjects who continue receiving ibrutinib beyond Cycle 12, labs will 
continue to occur every 3 cycles (ie, Cycle 13, 16, 19, etc.) until therapy is stopped, at which 
point an End of Treatment collection will occur.  Specimens can be collected additionally as felt 
clinically indicated by the investigators. 
Coagulation Studies: The PT, INR, and aPTT will be checked on Cycle 2 to ensure values 
remain stable compared to screening values.  Specimens can be collected additionally as felt 
clinically indicated by the investigators.  
Myeloma-specific Tests: Myeloma-specific tests include M-protein quantification by SPEP and 
UPEP, serum and urine immunofixation, serum free light chain, quantitative immunoglobulins, 
and β2-microglobulin.  UPEP is performed on a timed urine collection and should be recorded as 
normalized to 24 hours.  Urine creatinine determinations should be performed as well as UPEP 
on all urines collected for M-protein quantification. 
Biomarkers: Biomarkers of bone turnover (serum CTX, urine NTx, urine NDKK-1, RANKL, 
SDF-1, MIP-1α) and myeloma disease activity (IL-6) will be assayed on Cycle 7 Day 1.  If a 
subject continues on treatment beyond 12 cycles or continues on follow-up without treatment, 
these tests will continue to be checked at every 24 week intervals (eg, Cycle 13, 19, etc).  These 
labs will also be assessed at End of Treatment.  Serum CTX and urinary NTx will be sent to 
Quest Diagnostics for analysis.  The remaining specimens will be sent to Pharmacyclics for 
testing.  Refer to the laboratory manual for instructions on collecting and processing these 
samples. 
Bone Radiological Assessment: A repeat DEXA, PET-MRI and QCT with FEA are to be 
performed at End of Treatment.  Other bone radiological assessments are not mandated by the 
protocol, but should follow institutional guidelines and clinical discretion.  These other 
assessments can entail radiography, MRI, or PET/CT of any or all axial and appendicular 
skeleton. 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 42 
Missed Evaluations: Missed evaluations should be rescheduled and performed as close to the 
original scheduled date as possible.  An exception is made when rescheduling becomes, in the 
investigators’ opinion, medically unnecessary or unsafe because it is too close in time to the next 
scheduled evaluation.  In that case, the missed evaluation should be abandoned. 
End of Treatment: The End of Treatment is defined as end of ibrutinib therapy.  The End of 
Treatment visit should occur 30 days (±10 days) after the last administration of ibrutinib. 
8.3. 
Follow-up Phase 
The Follow-up Phase will begin once subjects discontinue treatment for reasons other than 
disease progression.  For example, subjects could have completed the planned number of cycles, 
or have been prematurely discontinued from study treatment.  Reasons for premature 
discontinuation of study treatment are listed in Section 5.4.  Subjects will continue in Follow-Up 
Phase until they require therapy for symptomatic MM, study closure, loss to follow-up, or 
withdrawal of consent, whichever occurs sooner.  They will continue to have disease evaluations 
as indicated by the Schedule of Assessments, with a +/- 1 month window on evaluations 
permitted for flexibility.  If subjects have not progressed to symptomatic MM, no other anti-
myeloma therapies are allowed during the study.   
Any follow-up information that is obtained via telephone contact must be documented in writing. 
 
 
9. 
SUBJECT COMPLETION AND WITHDRAWAL 
9.1. 
Completion 
The expected duration of this study is approximately 3 years.  The study is considered completed 
when the last assessment for the last subject participating in the study is performed, the Principal 
Investigator decides to terminate the study, or all subjects are rolled over to a long-term safety 
study. 
9.2. 
Withdrawal from Study 
Subjects may be withdrawn from the study at any time at the investigators’ discretion.  The 
reason for withdrawal will be clearly documented and recorded on the case report form.  
Common reasons for withdrawal include: 
o Patient withdrawal of consent or refusal to take study medication 
o Patient noncompliance: any significant non-medical deviation from the study protocol 
without prior agreement of the investigators 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 43 
o Disease progression: see Section 5.4 
o Toxicity: following a severe or life-threatening adverse reaction at the discretion of the 
treating physician 
o Prohibited medication: treatment with other chemotherapy or investigational agents is not 
allowed and will result in the patient’s removal from the study 
o Investigators’ discretion: patients may be discontinued from the study at any time at the 
investigators’ discretion 
 
 
10. STATISTICAL METHODS AND ANALYSIS 
10.1. 
Subject Information 
All enrolled subjects who received at least one cycle of study treatment will be used for 
statistical analysis. 
10.2. 
Endpoints  
10.2.1. 
Primary Endpoints 
The primary endpoint in this study is the proportion of patients with high risk smoldering 
multiple myeloma who do not progress to symptomatic myeloma by IMWG criteria after 12 
cycles (each 28 days) of ibrutinib therapy. 
 
10.2.2. 
Secondary Endpoints 
10.2.2.1. 
Overall response rate 
The proportion of patients who achieve a partial response or better (as defined by IMWG 
criteria) will be reported. 
10.2.2.2. 
Bone Density 
Changes in bone density and qCT after 12 cycles of ibrutinib therapy will be measured. 
10.2.2.3. 
PET-MRI 
Changes in PET-MRI findings after 12 cycles of ibrutinib therapy will be measured. 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 44 
10.2.2.4. 
Bone-related Biomarkers 
Changes in bone related biomarkers in urine and serum after 12 cycles of ibrutinib therapy will 
be measured and reported. 
10.2.2.5. 
Genomic and Immunologic Correlatives 
A separate but companion correlative study will examine possible baseline predictors of response 
as well as alterations associated with ibrutinib therapy at the genomic and immunologic levels. 
10.3. 
Sample Size Determination 
Null hypothesis: Approximately 25% of high risk SMM are expected to progress at 1 year. 
Alternative hypothesis: Given that the disease stabilization rate on ibrutinib monotherapy was 
30% in relapsed or relapsed/refractory MM patients with a median of 4 prior therapies (range 2-
14), we hypothesize that for a treatment naïve high risk SMM population, ibrutinib monotherapy 
will stabilize disease progression in most patients and only 10% of patients will progress at 1 
year.  
Utilizing a Simon's two-stage design, we will test the null hypothesis that the true response rate is 75% 
against a one-sided alternative that the response rate is 90%43.  Using a Simon’s two-stage design, we 
plan to enroll 15 patients in the first stage.  If 4 or more patients progress to symptomatic MM, 
enrollment to this cohort will be stopped for futility.  Otherwise, an additional 21 patients will be 
accrued, for a total sample size of 36.  The null hypothesis will be rejected if 30 or more 
responses are observed in 36 patients. This design yields a type I error rate of 15% and power of 
90% when the true response rate is 90%. 
10.4. 
Efficacy Analysis  
The rate of stable disease or better (PR, VGPR, CR, sCR; refer to Appendix 4) as per IMWG 
definitions after 12 cycles of ibrutinib therapy will be reported as a percentage of the total 
number of subjects that are analyzable.  A 90% exact confidence interval for the rate will be 
computed using the Clopper and Pearson method.  A 2-year PFS rate will be estimated using the 
Kaplan-Meier method and a 2-sided, 90% asymptotic confidence interval for the rate will be 
computed using Greenwood’s formula for the variance of a time-to-event rate. 
The final analyses of all endpoints, except those involving progression, will be conducted 6 
months after the last subject is enrolled.  The final analyses of progression-based endpoints, such 
as estimating the 2-year PFS rate and estimating the PFS distribution, will be conducted at the 
end of the study, which will occur after either all subjects have progressed or died or 3-years 
after the initiation of therapy of the last subject enrolled, whichever occurs first. 
10.5. 
Safety Analysis 
Sequential boundaries will be used to monitor the toxicity rate (all event terms of Grade 3 or 
greater). The accrual will be halted if excessive numbers of toxicities are seen, that is, if the 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 45 
number of toxicities is equal to or exceeds bn out of n patients with full follow-up (see table).  
Consideration will be given to restarting treatment at a decreased dose level based upon a risk to 
benefit analysis for all enrolled subjects to date.  If such a change is to be considered, then a 
protocol amendment will be submitted accordingly.  This is a Pocock-type stopping boundary 
that yields the probability of crossing the boundary at most 5% when the rate of dose-limiting 
toxicity is equal to the acceptable rate of 30%.   
Number of Patients, n 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 
Boundary, bn 
- - - 4 5 5 6 6 7 7 8 8 9 9 10 10 11 11 11 12 
Number of Patients, n 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 
Boundary, bn 
12 13 13 13 14 14 15 15 15 16 16 17 17 17 18 18 19 19 19 20 
Number of Patients, n 41 42 43 44 45 46  
 
 
 
 
 
 
 
 
 
 
 
 
 
Boundary, bn 
20 21 21 21 22 22 
 
Adverse events will be categorized using the latest version of MedDRA and will be graded using 
CTCAE v4.0.  Laboratory values will also be graded using CTCAE v4.0.  Worst grade of 
adverse events will be tabulated by System Organ Class and Preferred Term.  Shift from baseline 
to worst on-study value will be tabulated for hematologic and serum chemistry laboratory 
examinations.  These analyses will be done on the population of treated subjects, and presented 
separately by cohort.  
10.6. 
Biomarker Analyses 
Levels of the biomarkers IL-6, SDF-1, RANKL, MIP-1α, CTX, NTx will be collected and 
reported by their means with standard deviations before and after ibrutinib therapy. 
 
 
11. ADVERSE EVENT REPORTING 
Timely, accurate, and complete reporting and analysis of safety information from clinical studies 
are crucial for the protection of subjects, investigators, and the sponsor, and are mandated by 
regulatory agencies worldwide.  
11.1. Definitions  
11.1.1. Adverse Events 
An AE is any untoward medical occurrence in a subject administered a pharmaceutical product 
and which does not necessarily have a causal relationship with this treatment.  An AE can 
therefore be any unfavorable and unintended sign (including a clinically significant abnormal 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 46 
laboratory finding, for example), symptom, or disease temporally associated with the use of an 
investigational study drug, whether or not considered related to the study drug (ICH-E2A, 1995). 
For the purposes of this clinical study, AEs include events which are either new or represent 
detectable exacerbations of pre-existing conditions. 
The term “disease progression” should not be reported as an adverse event term.  As an example, 
"worsening of underlying disease" or the clinical diagnosis that is associated with disease 
progression should be reported. 
Adverse events may include, but are not limited to: 
• 
Subjective or objective symptoms provided by the subject and/or observed by the 
investigator or study staff including laboratory abnormalities of clinical significance. 
• 
Any AEs experienced by the subject through the completion of final study procedures. 
• 
AEs not previously observed in the subject that emerge during the protocol-specified AE 
reporting period, including signs or symptoms associated with the underlying disease that 
were not present before the AE reporting period  
• 
Complications that occur as a result of protocol-mandated interventions (eg, invasive 
procedures such as biopsies). 
The following are NOT considered AEs: 
• 
Pre-existing condition:  A pre-existing condition (documented on the medical history CRF) 
is not considered an AE unless the severity, frequency, or character of the event worsens 
during the study period. 
• 
Pre-planned or elective hospitalization:  A hospitalization planned before signing the 
informed consent form is not considered an SAE, but rather a therapeutic intervention.  
However, if during the pre-planned hospitalization an event occurs, which prolongs the 
hospitalization or meets any other SAE criteria, the event will be considered an SAE.  
Surgeries or interventions that were under consideration, but not performed before 
enrollment in the study, will not be considered serious if they are performed after enrollment 
in the study for a condition that has not changed from its baseline level.  Elective 
hospitalizations for social reasons, solely for the administration of chemotherapy, or due to 
long travel distances are also not SAEs. 
• 
Diagnostic Testing and Procedures:  Testing and procedures should not to be reported as 
AEs or SAEs, but rather the cause for the test or procedure should be reported. 
11.1.2. Serious Adverse Events 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 47 
A serious adverse event based on ICH and EU Guidelines on Pharmacovigilance for Medicinal 
Products for Human Use is any untoward medical occurrence that at any dose: 
• 
Results in death (ie, the AE actually causes or leads to death). 
• 
Is life-threatening.  Life-threatening is defined as an AE in which the subject was at risk of 
death at the time of the event.  It does not refer to an event which hypothetically might have 
caused death if it were more severe.  If either the investigator or the IND Sponsor believes 
that an AE meets the definition of life-threatening, it will be considered life-threatening. 
• 
Requires in-patient hospitalization >24 hours or prolongation of existing hospitalization. 
• 
Results in persistent or significant disability/incapacity (ie, the AE results in substantial 
disruption of the subject’s ability to conduct normal life functions). 
• 
Is a congenital anomaly/birth defect. 
• 
Is an important medical event that may not result in death, be immediately life-threatening 
or require hospitalization, but may be considered an SAE when, based upon appropriate 
medical judgment, the event may jeopardize the subject or subject may require intervention 
to prevent one of the other outcomes listed in this definition.  Examples of such events are 
intensive treatment in an emergency department or at home for allergic bronchospasm, 
blood dyscrasias, or convulsion that does not result in hospitalization; or development of 
drug dependency or drug abuse. 
11.1.3. Severity Criteria (Grade 1-5) 
Definitions found in the Common Terminology Criteria for Adverse Events version 4.0 
(CTCAE v4.0) will be used for grading the severity (intensity) of AEs.  The CTCAE v4.0 
displays Grades 1 through 5 with unique clinical descriptions of severity for each referenced AE.  
Should a subject experience any AE not listed in the CTCAE v4.0, the following grading system 
should be used to assess severity: 
• 
Grade 1 (Mild AE) – experiences which are usually transient, requiring no special treatment, 
and not interfering with the subject’s daily activities 
• 
Grade 2 (Moderate AE) – experiences which introduce some level of inconvenience or 
concern to the subject, and which may interfere with daily activities, but are usually 
ameliorated by simple therapeutic measures 
• 
Grade 3 (Severe AE) – experiences which are unacceptable or intolerable, significantly 
interrupt the subject’s usual daily activity, and require systemic drug therapy or other 
treatment 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 48 
• 
Grade 4 (Life-threatening or disabling AE) – experiences which cause the subject to be in 
imminent danger of death 
• 
Grade 5 (Death related to AE) – experiences which result in subject death 
11.1.4. Causality (Attribution)  
The investigator is to assess the causal relation (ie, whether there is a reasonable possibility that 
the study drug caused the event) using the following definitions: 
Not Related: 
Another cause of the AE is more plausible; a temporal sequence 
cannot be established with the onset of the AE and administration of 
the investigational product; or, a causal relationship is considered 
biologically implausible. 
Unlikely: 
The current knowledge or information about the AE indicates that a 
relationship to the investigational product is unlikely. 
Possibly Related: 
There is a clinically plausible time sequence between onset of the 
AE and administration of the investigational product, but the AE 
could also be attributed to concurrent or underlying disease, or the 
use of other drugs or procedures.  Possibly related should be used 
when the investigational product is one of several biologically 
plausible AE causes. 
Related: 
The AE is clearly related to use of the investigational product. 
11.2. Unexpected Adverse Events 
An “unexpected” AE is an AE that is not listed in the Investigator's Brochure/package insert or is 
not listed at the specificity or severity that has been observed.  For example, hepatic necrosis 
would be “unexpected” (by virtue of greater severity) if the Investigator's Brochure referred only 
to elevated hepatic enzymes or hepatitis.  Similarly, cerebral thromboembolism and cerebral 
vasculitis would be “unexpected” (by virtue of greater specificity) if the Investigator's 
Brochure/package insert listed only cerebral vascular accidents.  "Unexpected" also refers to AEs 
that are mentioned in the Investigator's Brochure as occurring with a class of drugs or as 
anticipated from the pharmacological properties of the drug, but are not specifically mentioned 
as occurring with the study drug under investigation. 
11.3. Documenting and Reporting of Adverse Events and Serious Adverse Events by 
Investigators 
11.3.1. Assessment of Adverse Events 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 49 
Investigators will assess the occurrence of adverse events and serious adverse events at all 
subject evaluation time points during the study.  All adverse events and serious adverse events 
whether volunteered by the subject, discovered by study personnel during questioning, detected 
through physical examination, clinically significant laboratory test, or other means, will be 
recorded.  Each recorded adverse event or serious adverse event will be described by its duration 
(ie, start and end dates), severity, regulatory seriousness criteria (if applicable), suspected 
relationship to the investigational product, and any actions taken. 
11.3.2. Adverse Event Reporting Period 
All serious AEs will be captured from the time the ICF is signed and dated to the first dose of the 
study drug.  Subsequently, all AEs whether serious or non-serious will be captured until 30 days 
following the last dose of study drug. 
Serious AEs reported after 30 days following the last dose of study drug should also be reported 
if considered related to study drug.  Resolution information after 30 days should be provided.  
Progressive disease should NOT be reported as an event term, but instead symptoms/clinical 
signs of disease progression may be reported (See Section 11.1.1). 
All adverse events, regardless of seriousness, severity, or presumed relationship to study drug, 
must be recorded using medical terminology in the source document.  All records will need to 
capture the details of the duration and the severity of each episode, the action taken with respect 
to the study drug, the investigators’ evaluation of its relationship to the study drug, and the event 
outcome.  Whenever possible, diagnoses should be given when signs and symptoms are due to a 
common etiology (eg, cough, runny nose, sneezing, sore throat, and head congestion should be 
reported as "upper respiratory infection").  
All deaths should be reported with the primary cause of death as the AE term, as death is 
typically the outcome of the event, not the event itself.  
If a death occurs within 30 days after the last dose of study drug, the death must be reported as a 
serious adverse event.  
11.3.3. Pregnancy 
Before study enrollment, subjects must agree to take appropriate measures to avoid pregnancy.  
However, should a pregnancy occur in a female study subject, consent to provide follow-up 
information regarding the outcome of the pregnancy and the health of the infant until 30 days old 
will be requested. 
A female subject must immediately inform the investigators if she becomes pregnant from the 
time of consent to 30 days after the last dose of study drug.  A male subject must immediately 
inform the investigator if his partner becomes pregnant from the time of consent to 3 months 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 50 
after the last dose of study drug.  Any female subjects receiving study drug(s) who become 
pregnant must immediately discontinue study drug.  The investigators should counsel the subject, 
discussing any risks of continuing the pregnancy and any possible effects on the fetus.   
Although pregnancy itself is not regarded as an adverse event, the outcome will need to be 
documented.  Any pregnancy occurring in a subject or subject’s partner from the time of consent 
to 30 days (or 90 days for male partners) after the last dose of study drug must be reported.  Any 
occurrence of pregnancy must be reported to the Tisch Cancer Institute Data and Safety 
Monitoring Committee, the IRB, and Pharmacyclics, per SAE reporting timelines.  All 
pregnancies will be followed for outcome, which is defined as elective termination of the 
pregnancy, miscarriage, or delivery of the fetus.  For pregnancies with an outcome of live birth, 
the newborn infant will be followed until 30 days old and this must be reported to Pharmacyclics 
Drug Safety, or designee, per SAE reporting timelines.  Any congenital anomaly/birth defect 
noted in the infant must be reported as a serious adverse event. 
11.3.4. Other Malignancies 
All new malignant tumors including solid tumors, skin malignancies and hematologic 
malignancies will be reported for the duration of study treatment and during any protocol-
specified follow-up periods including post-progression follow-up for overall survival. 
11.3.5. Eye-Related Adverse Events 
New or worsening eye-related symptoms that are Grade 2 or higher, or a symptom that was 
Grade 2 or higher at baseline worsens, should be evaluated by an ophthalmologist whose 
findings should be reported on the ophthalmologic eCRF. 
11.3.6. Adverse Events of Special Interest (AESI) 
Specific adverse events, or groups of adverse events, will be followed as part of standard safety 
monitoring activities.  These events (regardless of seriousness) will be reported to Pharmacyclics 
Drug Safety per the SAE reporting timelines.   
11.3.6.1. 
Major Hemorrhage 
Major hemorrhage is defined as any of the following: 
• Any treatment-emergent hemorrhagic adverse events of Grade 3 or higher* 
• Any treatment-emergent serious AEs of bleeding of any grade 
• Any treatment-emergent central nervous system hemorrhage/hematoma of any grade 
 
*All hemorrhagic events requiring transfusion of red blood cells should be reported as grade 3 or higher AE per 
CTCAE. ‘Events meeting the definition of major hemorrhage will be captured as an event of special interesting 
according to Section 11.3.6 above.’ 
 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 51 
11.3.7. Expediting Reporting Requirements for Serious Adverse Events 
All serious adverse events and AESIs (initial and follow-up information) will be reported on 
FDA Medwatch (Form 3500A) or Suspect Adverse Event Report (CIOMS Form 1) IRB 
Reporting Form and sent via email (AEintakePM@pcyc.com) or fax ((408) 215-3500) to 
Pharmacyclics Drug Safety, or designee , within 15 days of the event.  Pharmacyclics may 
request follow-up and other additional information from the investigator.  
All serious adverse events that have not resolved by the end of the study, or that have not 
resolved upon discontinuation of the subject's participation in the study, must be followed until 
any of the following occurs: 
• 
The event resolves 
• 
The event stabilizes 
• 
The event returns to baseline, if a baseline value/status is available 
• 
The event can be attributed to agents other than the study drug or to factors unrelated to                                 
study conduct 
• 
It becomes unlikely that any additional information can be obtained (subject or health care 
practitioner refusal to provide additional information, lost to follow up after demonstration 
of due diligence with follow-up efforts) 
Reporting to Regulatory Agencies: 
Serious adverse events will be reported to the FDA by the IND Sponsor (Mount Sinai) according 
to 21 CFR 312.32.  In the event of any such events, the study will be stopped until the event is 
thoroughly investigated and reviewed with the FDA. 
It is the responsibility of the investigators and the research team to ensure that serious adverse 
events are reported according to the Code of Federal Regulations, Good Clinical Practices 
(GCP), the protocol guidelines, the sponsor’s guidelines, and Institutional Review Board policy. 
 
 
12. STUDY ADMINISTRATION AND INVESTIGATOR OBLIGATIONS   
12.1. 
Regulatory and Ethical Compliance 
This clinical study was designed and shall be implemented and reported in accordance with the 
International Conference on Harmonization Harmonized Tripartite Guidelines for Good Clinical 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 52 
Practice, with applicable local regulations (including European Directive 2001/20/EC and US 
Code of Federal Regulations Title 21), and with the ethical principles laid down in the 
Declaration of Helsinki. 
12.2. 
Institutional Review Board (IRB), Research Ethics Board (REB) and Independent 
Ethics Committee (IEC) Approval 
The investigator will submit this protocol, the ICF, IB, and any other relevant supporting 
information (eg, all advertising materials or materials given to the subject during the study) to the 
appropriate IRB/IEC for review and approval before study initiation.  Amendments to the 
protocol and ICF must also be approved by the IRB/IEC before the implementation of changes in 
this study.   
The investigator is responsible for providing the IRB/IEC with any required information before 
or during the study, such as SAE expedited reports or study progress reports.   
The IRB/IEC must comply with current US regulations (§21 CFR 56) as well as country-specific 
national regulations and/or local laws.  
The following documents must be provided to Pharmacyclics or its authorized representative, 
before entering subjects in this study: (1) a copy of the IRB/IEC letter that grants formal 
approval and (2) a copy of the IRB/IEC-approved ICF. 
12.3. 
Informed Consent 
The ICF and process must comply with the United States regulations (§ 21 CFR Part 50) as well 
as country specific national regulations and/or local laws.  The ICF will document the study-
specific information the investigator or his/her designee provides to the subject and the subject’s 
agreement to participate.  The investigator, or designee (designee must be listed on the 
Delegation of Authority log), must explain in terms understandable to the subject the purpose 
and nature of the study, the study procedures, anticipated benefits, potential risks, the possible 
adverse effects, and any discomfort participation in the study may entail.  Each subject must 
provide a signed and dated ICF before any study-related (nonstandard of care) activities are 
performed (such as screening).  The original and any amended signed and dated consent forms 
must remain in each subject’s study file at the study site and be available for verification by the 
study investigators at any time.  A copy of each signed consent form must be given to the subject 
at the time that it is signed by the subject. 
12.4. 
Quality Control and Quality Assurance 
The investigators shall implement and maintain quality control and quality assurance procedures 
to ensure that the study is conducted and data are generated, documented and reported in 
compliance with the protocol, GCP, and applicable regulatory requirements.  This study shall be 
conducted in accordance with the provisions of the Declaration of Helsinki (October 2008) and 
all revisions thereof, and in accordance with FDA regulations (§21 CFR Parts 11, 50, 54, 56, and 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 53 
312, Subpart D – Responsibilities of Sponsors and Investigators) and with the ICH guidelines on 
GCP (ICH E6).  
12.5. 
Protected Subject Health Information Authorization 
Information on maintaining subject confidentiality in accordance to individual local and national 
subject privacy regulations must be provided to each subject as part of the informed consent 
process (refer to Section 12.3), either as part of the ICF or as a separate signed document (for 
example, in the US, a site-specific Health Insurance Portability and Accountability Act consent 
may be used).  The investigators or designee must explain to each subject that for the evaluation 
of study results, the subject’s protected health information obtained during the study may be 
shared with Pharmacyclics and its designees, regulatory agencies, and IRBs/IECs.  As the study 
sponsor, the investigators will not use the subject’s protected health information or disclose it to 
a third party without applicable subject authorization.  It is the investigators’ or designee’s 
responsibility to obtain written permission to use protected health information from each subject.  
If a subject withdraws permission to use protected health information, it is the investigators’ 
responsibility to obtain the withdrawal request in writing from the subject and to ensure that no 
further data will be collected from the subject.  Any data collected on the subject before 
withdrawal will be used in the analysis of study results.  
During the review of source documents by the study investigators or auditors, the confidentiality 
of the subject will be respected with strict adherence to professional standards and regulations. 
12.6. 
Study Files and Record Retention 
The investigators and other appropriate study staff are responsible for maintaining all essential 
documentation relevant to the study.  Essential documentation includes, but is not limited to, the 
IB, signed protocols and amendments, IRB/IEC approval letters (dated), signed Form FDA 1572 
and Financial Disclosure, signed ICFs (including subject confidentiality information), drug 
dispensing and accountability records, shipping records of investigational product and study-
related materials, signed (electronically), dated and completed CRFs, and documentation of CRF 
corrections; SAE forms transmitted to Pharmacyclics and notification of SAEs and related 
reports, source documentation, normal laboratory values; decoding procedures for blinded 
studies; curricula vitae for study staff, all relevant correspondence, and other documents 
pertaining to the conduct of the study.  
Subject identity information will be maintained for 15 years.  All other essential documentation 
will be retained by the investigator for at least 2 years after the date the last marketing 
application is approved for the drug for the indication for which it is being investigated and until 
there are no pending or contemplated marketing applications; or, if no application is to be filed 
or if the application is not approved for such indication, until 2 years after formal discontinuation 
of clinical development of the drug.   


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 54 
Pharmacyclics must be notified in advance of any change in the maintenance of the foregoing 
documents if the investigator wishes to move study records to another location or assign 
responsibility for record retention to another party.  
12.7. 
Case Report Forms and Record Maintenance 
Electronic case report forms (eCRFs) will be used to collect the clinical study data and must be 
completed for each enrolled subject with all required study data accurately recorded such that the 
information matches the data contained in medical records (eg, physicians’ notes, nurses’ notes, 
clinic charts and other study-specific source documents).  Authorized study site personnel (ie, 
listed on the Delegation of Authority form) will complete eCRFs designed for this study 
according to the completion guidelines that will be provided.  The investigators will ensure that 
the eCRFs are accurate, complete, legible, and completed as soon as reasonably possible.  At all 
times, the investigators have final responsibility for the accuracy and authenticity of all clinical 
data.  Study staff will be appropriately trained in the use of eCRFs and application of electronic 
signatures before the start of the study and before being given access to the EDC system.  
Original data and any changes of data will be recorded using the EDC system, with all changes 
tracked by the system and recorded in an electronic audit trail. The investigator attests that the 
information contained in the eCRFs is true by providing electronic signature within the EDC 
system. 
12.8. 
Investigational Study Drug Accountability 
12.8.1. 
Receipt of Study Drug 
The Principal Investigator or designee is responsible for taking an inventory of each shipment of 
study drug received, and comparing it with the accompanying study drug accountability form.  
The Investigator will verify the accuracy of the information on the form, sign and date it, retain a 
copy in the study file, and return a copy to Pharmacyclics or its representative. 
12.8.2. 
Storage 
At the study site, all investigational study drugs will be stored in a locked, safe area to prevent 
unauthorized access. 
The study drug should be stored at room temperature away from direct sunlight and protected 
from excessive heat and cold. 
12.8.3. 
Unused Study Drug Supplies 
Pharmacyclics will instruct the Investigator on the return or destruction of unused study drug.  If 
any study drug is lost or damaged, its disposition should be documented in the source 
documents.  Study drug supplies will be retained at the clinical site pending instructions for 
disposition by Pharmacyclics.  Patients will be instructed to return empty bottles or unused 
capsules. 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 55 
12.9. 
Study Monitoring/Audit Requirements 
The investigator will monitor this study until completion.  The purpose of monitoring is to ensure 
that the study is conducted in compliance with the protocol, standard operating procedures 
(SOPs), and other written instructions and regulatory guidelines, and to endure the quality and 
integrity of the data.  This study is also subject to reviews or audits.  
During the review of source documents, every effort will be made to maintain the anonymity and 
confidentiality of all subjects during this clinical study.  However, because of the experimental 
nature of this treatment, the investigator agrees to allow the IRB/IEC and authorized employees 
of the appropriate regulatory agencies to inspect the facilities used in this study and, for purposes 
of verification, allow direct access to the hospital or clinic records of all subjects enrolled into 
this study.  A statement to this effect will be included on the ICF and permission from 
authorizing the use of protected health information.  
12.10. 
Investigator Responsibilities 
The investigator is responsible for ensuring that the study is performed in accordance with the 
protocol, current ICH guidelines on GCP, and applicable regulatory and country-specific 
requirements.  
Good Clinical Practice is an international ethical and scientific quality standard for designing, 
conducting, recording, and reporting studies that involve the participation of human subjects. 
Compliance with this standard provides public assurance that the rights, safety, and well-being of 
study subjects are protected, consistent with the principles that originated in the Declaration of 
Helsinki, and that the study data are credible.  
Data Safety Monitoring Board 
Data and safety will be monitored by an internal Data and Safety Monitoring Board (DSMB) 
chaired by the PI. Other members of the committee will include co-investigators, the myeloma 
research program manager, and clinical research coordinators. All of these individuals have 
experience in clinical care as well as clinical research and monitoring of subjects with multiple 
myeloma. A statistician will also serve as a member of the committee.  
Expected events in a population of patients with smoldering multiple myeloma include 
progression to multiple myeloma (as evidenced by hypercalcemia, renal insufficiency, anemia, 
lytic bone lesions, and ≥ 60% bone marrow plasma cells), infections, and venous 
thromboembolism. These events will be monitored for frequency and severity. If the 
investigators become aware that an otherwise expected adverse event has increased in severity or 
frequency, these will be promptly reported to the Tisch Cancer Institute (TCI) Data and Safety 
Monitoring Committee (DSMC), the IRB, and Pharmacyclics as an unexpected event. All deaths 
and any unanticipated serious adverse events will be reported to these three groups as well as to 
the FDA. The study will be stopped until the event has been fully evaluated and discussed with 
the FDA.  
The myeloma research program manager will log and track all adverse events (graded by NCI 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 56 
CTC criteria), subject enrollment, and protocol compliance. These findings will be 
systematically reviewed by the DSMB after the first three patients have completed 3 months of 
study treatment and thereafter every four months. A written report of the DSMB’s findings will 
be generated. This report will be sent to the TCI DSMC. If the DSMB determines that due to 
safety or concern about lack of efficacy the study must be halted or the protocol modified, the 
TCI DSMC, IRB, and Pharmacyclics will be promptly notified and provided a copy of the 
written report.  
 
12.11. 
Protocol Amendments 
Per the IST Agreement, any amendments to the Protocol or Informed Consent Form protocol 
must be sent to Pharmacyclics for review and approval prior to submission to the IRB.  Written 
verification of IRB approval will be obtained before any amendment is implemented. 
12.12. 
Publication of Study Results 
Per the IST Agreement, the investigator is required to submit to Pharmacyclics a copy of a 
planned publication (abstract, poster, oral presentation or manuscript) prior to the submission 
thereof for publication or disclosure.  Pharmacyclics may provide scientific comments and 
suggestions understanding that the investigators have sole editorial responsibility, and retains the 
authority to make the final determination on whether or not to incorporate Pharmacyclics 
comments or requests for additional information. 
12.13. 
Study Discontinuation 
Per the IST Contract, the Principal Investigator reserves the right to terminate the study at any 
time.  Should this be necessary, the Principal Investigator will arrange discontinuation 
procedures in partnership with Pharmacyclics.  In terminating the study, the Principal 
Investigator will assure that adequate consideration is given to the protection of the subjects’ 
interests.  Pharmacyclics may terminate the study for reasons including, but not limited to: 
evidence that the PI or an involved investigator is unqualified to conduct research or fulfill 
sponsor responsibilities (e.g., is listed on a debarment or ineligible investigator list); failure to 
meet timelines or achieve agreed upon milestones; a known or perceived risk to patient well-
being is identified; or breach of contract.  Additional grounds for termination are outlined in the 
IST Agreement. 
 
 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 57 
13. REFERENCES 
1. 
Roodman GD. Targeting the bone microenvironment in multiple myeloma. Journal of 
bone and mineral metabolism 2010;28:244-50. 
2. 
Aggarwal R, Ghobrial IM, Roodman GD. Chemokines in multiple myeloma. 
Experimental hematology 2006;34:1289-95. 
3. 
Roodman GD. Osteoblast function in myeloma. Bone 2011;48:135-40. 
4. 
Roodman GD. Pathogenesis of myeloma bone disease. Journal of cellular biochemistry 
2010;109:283-91. 
5. 
Roodman GD, Choi SJ. MIP-1 alpha and myeloma bone disease. Cancer treatment and 
research 2004;118:83-100. 
6. 
Kawano M, Hirano T, Matsuda T, et al. Autocrine generation and requirement of BSF-
2/IL-6 for human multiple myelomas. Nature 1988;332:83-5. 
7. 
Rajkumar SV, Dimopoulos MA, Palumbo A, et al. International Myeloma Working 
Group updated criteria for the diagnosis of multiple myeloma. The Lancet Oncology 
2014;15:e538-48. 
8. 
Kyle RA, Remstein ED, Therneau TM, et al. Clinical course and prognosis of smoldering 
(asymptomatic) multiple myeloma. N Engl J Med 2007;356:2582-90. 
9. 
Kyle RA, Durie BG, Rajkumar SV, et al. Monoclonal gammopathy of undetermined 
significance (MGUS) and smoldering (asymptomatic) multiple myeloma: IMWG consensus 
perspectives risk factors for progression and guidelines for monitoring and management. 
Leukemia 2010;24:1121-7. 
10. 
Kastritis E, Terpos E, Moulopoulos L, et al. Extensive bone marrow infiltration and 
abnormal free light chain ratio identifies patients with asymptomatic myeloma at high risk for 
progression to symptomatic disease. Leukemia 2013;27:947-53. 
11. 
Larsen JT, Kumar SK, Dispenzieri A, Kyle RA, Katzmann JA, Rajkumar SV. Serum free 
light chain ratio as a biomarker for high-risk smoldering multiple myeloma. Leukemia 
2013;27:941-6. 
12. 
Waxman AJ, Mick R, Garfall AL, et al. Modeling the risk of progression in smoldering 
multiple myeloma. ASCO Meeting Abstracts 2014;32:8607. 
13. 
Sorrig R, Klausen TW, Salomo M, et al. Smoldering multiple myeloma risk factors for 
progression: a Danish population-based cohort study. European journal of haematology 2015. 
14. 
Ghobrial IM, Landgren O. How I treat smoldering multiple myeloma. Blood 
2014;124:3380-8. 
15. 
Mateos MV, Hernandez MT, Giraldo P, et al. Lenalidomide plus dexamethasone for 
high-risk smoldering multiple myeloma. N Engl J Med 2013;369:438-47. 
16. 
Mateos MV. Personal communication. In: Chari A, ed.2013. 
17. 
Mateos MV. Management of asymptomatic myeloma patients. Expert Rev Hematol 
2015;8:19-27. 
18. 
Palumbo A, Anderson K. Multiple myeloma. The New England journal of medicine 
2011;364:1046-60. 
19. 
Bishop GA, Haxhinasto SA, Stunz LL, Hostager BS. Antigen-specific B-lymphocyte 
activation. Critical reviews in immunology 2003;23:149-97. 
20. 
Shaffer AL, Rosenwald A, Staudt LM. Lymphoid malignancies: the dark side of B-cell 
differentiation. Nature reviews Immunology 2002;2:920-32. 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 58 
21. 
Chauhan D, Auclair D, Robinson EK, et al. Identification of genes regulated by 
dexamethasone in multiple myeloma cells using oligonucleotide arrays. Oncogene 
2002;21:1346-58. 
22. 
Tai YT, Chang BY, Kong SY, et al. Bruton tyrosine kinase inhibition is a novel 
therapeutic strategy targeting tumor in the bone marrow microenvironment in multiple myeloma. 
Blood 2012;120:1877-87. 
23. 
Bam R, Pennisi A, Li X, al. E. Role of Bruton’s tyrosine kinase in myeloma cell 
migration 
and induction of bone disease. American journal of hematology 2013;88:463-71. 
24. 
Broyl A, Hose D, Lokhorst H, et al. Gene expression profiling for molecular 
classification of multiple myeloma in newly diagnosed patients. Blood 2010;116:2543-53. 
25. 
Zhan F, Huang Y, Colla S, et al. The molecular classification of multiple myeloma. 
Blood 2006;108:2020-8. 
26. 
Robillard N, Avet-Loiseau H, Garand R, et al. CD20 is associated with a small mature 
plasma cell morphology and t(11;14) in multiple myeloma. Blood 2003;102:1070-1. 
27. 
Lee SH, Kim T, Jeong D, Kim N, Choi Y. The tec family tyrosine kinase Btk Regulates 
RANKL-induced osteoclast maturation. The Journal of biological chemistry 2008;283:11526-34. 
28. 
Danks L, Workman S, Webster D, Horwood NJ. Elevated cytokine production restores 
bone resorption by human Btk-deficient osteoclasts. Journal of bone and mineral research : the 
official journal of the American Society for Bone and Mineral Research 2011;26:182-92. 
29. 
Shinohara M, Chang BY, Buggy JJ, et al. The orally available Btk inhibitor ibrutinib 
(PCI-32765) protects against osteoclast-mediated bone loss. Bone 2014;60:8-15. 
30. 
Hurt EM, Wiestner A, Rosenwald A, et al. Overexpression of c-maf is a frequent 
oncogenic event in multiple myeloma that promotes proliferation and pathological interactions 
with bone marrow stroma. Cancer cell 2004;5:191-9. 
31. 
Matsui W, Huff CA, Wang Q, et al. Characterization of clonogenic multiple myeloma 
cells. Blood 2004;103:2332-6. 
32. 
Matsui W. Unpublished data. 2011. 
33. 
Vij R, Huff CA, Bensinger WI, et al. Ibrutinib, Single Agent or in Combination with 
Dexamethasone, in Patients with Relapsed or Relapsed/Refractory Multiple Myeloma (MM): 
Preliminary Phase 2 Results. Blood 2014;124. 
34. 
Chari A, Chhabra S, Usmani S, et al. Combination Treatment of the Bruton's Tyrosine 
Kinase Inhibitor Ibrutinib and Carfilzomib in Patients with Relapsed or Relapsed and Refractory 
Multiple Myeloma: Initial Results from a Multicenter Phase 1/2b Study. Blood 2015;126:377-. 
35. 
Pan Z, Scheerens H, Li SJ, et al. Discovery of selective irreversible inhibitors for 
Bruton's tyrosine kinase. ChemMedChem 2007;2:58-61. 
36. 
Herman SE, Gordon AL, Hertlein E, et al. Bruton tyrosine kinase represents a promising 
therapeutic target for treatment of chronic lymphocytic leukemia and is effectively targeted by 
PCI-32765. Blood 2011;117:6287-96. 
37. 
Chang BY, Francesco M, Steggerda S, al. e. Ibrutinib Inhibits Malignant Cell Adhesion 
and Migration and Reduces Tumor Burden in Lymph Node and Bone Marrow in a Murine 
Model of Mantle Cell Dissemination and Progression. AACR: Abstract 2013:923. 
38. 
Rushworth SA, Bowles KM, Barrera LN, Murray MY, Zaitseva L, MacEwan DJ. BTK 
inhibitor ibrutinib is cytotoxic to myeloma and potently enhances bortezomib and lenalidomide 
activities through NF-kappaB. Cell Signal 2013;25:106-12. 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 59 
39. 
Dhodapkar MV, Sexton R, Waheed S, et al. Clinical, genomic, and imaging predictors of 
myeloma progression from asymptomatic monoclonal gammopathies (SWOG S0120). Blood 
2014;123:78-85. doi: 10.1182/blood-2013-07-515239. Epub 2013 Oct 21. 
40. 
Sagiv-Barfi I, Kohrt HE, Czerwinski DK, Ng PP, Chang BY, Levy R. Therapeutic 
antitumor immunity by checkpoint blockade is enhanced by ibrutinib, an inhibitor of both BTK 
and ITK. Proc Natl Acad Sci U S A 2015;112:E966-72. doi: 10.1073/pnas.1500712112. Epub 
2015 Feb 17. 
41. 
Dubovsky JA, Beckwith KA, Natarajan G, et al. Ibrutinib is an irreversible molecular 
inhibitor of ITK driving a Th1-selective pressure in T lymphocytes. Blood 2013;122:2539-49. 
doi: 10.1182/blood-2013-06-507947. Epub 2013 Jul 25. 
42. 
Greipp PR, San Miguel J, Durie BG, et al. International staging system for multiple 
myeloma. Journal of clinical oncology : official journal of the American Society of Clinical 
Oncology 2005;23:3412-20. 
43. 
Simon R. Optimal two-stage designs for phase II clinical trials. Controlled clinical trials 
1989;10:1-10. 
44. 
Durie BG, Harousseau JL, Miguel JS, et al. International uniform response criteria for 
multiple myeloma. Leukemia 2006;20:1467-73. 
45. 
Oken MM, Creech RH, Tormey DC, et al. Toxicity and response criteria of the Eastern 
Cooperative Oncology Group. Am J Clin Oncol 1982;5:649-55. 
 
 
 
 


Ibrutinib (PCI-32765) 
20053  
7/17/17 
Final 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 60 
14. APPENDICES 


Ibrutinib (PCI-32765) 
20053  
06/13/2016 
Final 
 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 61 
14.1. 
Appendix 1.  Schedule of Assessments 
Study procedure 
Screening 
Treatment period1 
End of 
Treatment 
(EOT)2 
Follow-up 
visits3 
Cycle (= 28 days)
1 
2 3 4 
7 
10 and 
beyond4 
Day
15 
1 1 1 
1 
1 
Window 
≤ 28 days 
before start6 
± 3 days 
± 10 days 
PROCEDURES 
Informed consent 
X 
 
 
 
 
 
 
 
 
Demographics 
X 
 
 
 
 
 
 
 
 
Inclusion/exclusion criteria 
X 
 
 
 
 
 
 
 
 
Height 
X 
 
 
 
 
 
 
 
 
Medical history 
X 
 
 
 
 
 
 
 
 
ECOG performance status 
X 
X 
X X X 
X 
X 
X 
X 
Concomitant medications 
X 
X 
X X X 
X 
X 
X 
X 
Adverse events assessment 
X 
X 
X X X 
X 
X 
X 
X 
Vital signs, including weight 
X 
X 
X X X 
X 
X 
X 
X 
Physical exam 
X 
X 
X X X 
X 
X 
X 
X 
Bone marrow aspirate, biopsy, flow cytometry, 
cytogenetics/FISH, and banking for 
correlatives 7 
X 
 
 
 
 
XError! 
Bookmark 
not 
defined. 
 
X 
 
ECG8 
X 
 
 
 
 
 
 
 
 
LABORATORY STUDIES 
CBC, with differential 
X 
X 
X X X 
X 
X 
X 
X 
Chemistries9 
X 
X 
X X X 
X 
X 
X 
X 
Magnesium, phosphorus, LDH, uric acid 
X 
 
 
 
 
 
 
 
 
Lipid panel 
X 
 
 
 
 
 
 
 
 
PT, PTT, INR 
X 
 
X  
 
 
 
 
 
Urinalysis 
X 
 
 
 
 
 
 
 
 
B-2 microglobulin 
X 
 
 
 
 
 
 
X 
 
25-hydroxy vitamin D10 
X 
 
 
 
 
 
 
X 
 
Pregnancy test (blood or urine)11 
X 
X 
X X X 
X 
X 
X 
 
Serum M-protein (SPEP) 
X 
X 
 
 X 
X 
X 
X 
X 
Serum quantitative immunoglobulins 
X 
X 
 
 X 
X 
X 
X 
X 
Serum free light chain assay 
X 
X 
 
 X 
X 
X 
X 
X 
Serum immunofixation12 
X 
X 
 
 
 
 
 
X 
X 
Urine immunofixation12 
X 
X 
 
 
 
 
 
X 
X 
24-hr urine protein electrophoresis (UPEP)12,13 
X 
X 
 
 X 
X 
X 
X 
X 
Biomarkers: DKK-1, IL-6, SDF-1, RANKL, 
MIP-1α, CTX, urinary NTx, and banking for 
correlatives 14 
 
X 
 
 
 
X 
 
X 
X15 
IMAGING STUDIES 
PET-MRI 
X 
 
 
 
 
 
 
X16 
 
Skeletal survey 
X 
 
 
 
 
 
 
 
 
DEXA scan 17 
X 
 
 
 
 
 
 
X18 
 
                                                 
1 No study assessments are planned for the following cycles: 5, 6, 8, 9, 11, 12.  If treatment is continued beyond 12 cycles, then study visits will occur once every 3 cycles (eg, 
13, 16, 19, etc). 
2 Occurs 30 days (±10 days) after the last administration of study treatment.  
3 For subjects who discontinue treatment for reasons other than disease progression.  Continues until subject requires therapy for symptomatic MM or study closure, whichever 
occurs sooner.  These assessments will be performed every 12 weeks apart.  A +/- 1 month window for these visits is permitted for flexibility 
4 Patients who benefit from therapy will continue on ibrutinib beyond 12 cycles until evidence of disease progression up to a maximum of 24 cycles.  They will be assessed 
every 3 cycles – ie, C13D1, C16D1, C19D1, C22D1, etc. 
5 Labs required for this cycle (Cycle 1) do not need to be repeated if done within 7 days prior to C1D1. 
6 Any bone marrow aspirate and biopsy, and imaging studies that were performed within 42 days of screening will be acceptable for screening purposes and will not need to be 
repeated. 
7 If the patient has had a bone marrow biopsy and aspirate done within 42 days of the Screening Visit, then this test does not need to be repeated.  Flow cytometry should 
include immunophenotyping for SMM risk stratification.  Cytogenetics and FISH studies should be repeated only if clinically indicated for the C7D1 and EOT time points.  Each 
time that bone marrow is harvested, an additional 6 mL of aspirate should be collected in a green-top tube (containing heparin) and sent to the lab of Dr. Samir Parekh for 
analysis of genomic and immunologic correlatives. 
8 Performed with patient lying in supine position. 
9 Chemistries include: sodium, potassium, chloride, bicarbonate, BUN, creatinine, albumin, total protein, total bilirubin, alkaline phosphatase, AST, ALT, calcium.  Using the 
creatinine, the patient’s creatinine clearance (CrCl) will be calculated using the Cockcroft-Gault formula. 
10 May be repeated at additional time intervals as felt clinically indicated. 
11 Pregnancy testing is required for women of childbearing potential.  The Cycle 1 Day 1 testing may be omitted if the screening test was performed within 72 hours prior.  A 
positive result will result in disqualification or discontinuation from the study. 
12 May not need to be performed at all indicated visits - more limited testing is possible for certain patients.  Refer to Section 7.2 for more information. 
13 Required for patients who have disease detectable in urine to confirm IMWG responses of VGPR or better. . 
14 Biomarkers to be drawn prior to administration of ibrutinib. Serum CTX and urinary NTx will be sent to Quest Diagnostics.  The other biomarker tests will be sent to PCYC.  In 
addition, 6 mL of blood should be collected in a green-top tube and banked  for analysis of genomic and immunologic correlatives. 
15 Note that these labs will be checked every 24 weeks, instead of every 12 weeks as specified for the other labs. 
16 Repeat PET-MRI is to be performed after 12 cycles of therapy. 
17 T-scores for the following areas will be recorded: lumbar spine, femoral neck (both sides), total hip, forearm/radius.  The lowest (most negative) T-score amongst all recorded 
values will be used to determine ‘osteopenia’ and ‘osteoporosis.’  Osteopenia is defined as a T-score between -1.0 and -2.5.  Osteoporosis is defined as a T-score lower than -
2.5. 
18 To be performed only in patients who have received at least 6 cycles of treatment. 
 


Ibrutinib (PCI-32765) 
20053  
06/13/2016 
Final 
 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 62 
QCT with FEA 
X 
 
 
 
 
 
 
X18 
 


Ibrutinib (PCI-32765) 
20053  
06/13/2016 
Final 
 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 63 
14.2. 
Appendix 2.  Inhibitors and Inducers of CYP3A 
Inhibitors and inducers of CYP3A enzymes are defined as follows. A comprehensive list of inhibitors can 
be found at the following website: http://medicine.iupui.edu/clinpharm/ddis/main-table/. The general 
categorization into strong, moderate, and weak inhibitors according to the website is displayed below. 
Refer to Section 6.2.1 on instructions for concomitant use of CYP3A inhibitors and inducers with 
ibrutinib. 
Inhibitors of CYP3A 
Inducers of CYP3A 
Strong inhibitors: 
Strong inducers: 
Indinavir 
Avasimibe 
Nelfinavir 
Carbamazepine 
Ritonavir 
Phenobarbital 
Clarithromycin 
Phenytoin 
Itraconazole 
Rifampin 
Ketoconazole 
Rifabutin 
Nefezodone 
St. John’s Wort 
Saquinavir 
Moderate inducers: 
Suboxone 
Bosentan 
Telithromycin 
Efavirenz 
Cobicistat 
Etravirine 
Boceprevir 
Modafinil 
Mibefradil 
Nafcillin 
Telaprevir 
Weak inducers: 
Troleandomycin 
Amprenavir 
Posaconazole 
Aprepitant 
Moderate inhibitors: 
Armodafinil 
Aprepitant 
Clobazamechinacea 
Amprenavir 
Glucocorticoids 
Amiodarone 
Nevirapine 
Atazanavir 
Oxcarbarzepine 
Ciprofloxacin 
Pioglitazone 
Crizotinib 
Rufinamide 
Darunavir/ritonavir 
Troglitazone 
Dronedarone 
Vemurafenib 
Erythromycin 
 
Diltiazem  
 
Fluconazole 
 
Fosamprenavir 
 
grapefruit juice 
 
Seville orange juice 
 
Verapamil 
 
Voriconazole 
Imatinib 
 
Weak inhibitors: 
 
Cimetidine 
Fluvoxamine 
 
All other inhibitors: 
 
Chloramphenicol 
 
Delaviridine 
 
diethyl-dithiocarbamate 
 
Gestodene 
 
Mifepristone 
 
Norfloxacin 
 


Ibrutinib (PCI-32765) 
20053  
06/13/2016 
Final 
 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 64 
Norfluoxetine 
 
star fruit 
 
 
 
 


Ibrutinib (PCI-32765) 
20053  
06/13/2016 
Final 
 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 65 
14.3. 
Appendix 3.  IMWG Uniform Response Criteria44 
RELAPSE CRITERIA 
sCR (Stringent complete response) 
CR as defined below AND normal FLC ratio AND absence of clonal cells in bone marrow 
by immunohistochemistry or immunofluorescence 
CR (Complete response) 
No M-protein in serum and urine by immunofixation AND no current evidence of soft tissue 
plasmacytomas AND ≤ 5% plasma cells in the bone marrow 
In patients who lack measurable M-proteins in the serum and urine being monitored using 
FLC levels, the definition of CR requires a normalization of the FLC ratio in addition to the 
above criteria 
VGPR (Very good partial response) 
Serum and urine M-protein detectable by immunofixation but not on electrophoresis OR ≥ 
90% reduction in serum M-protein plus urine M-protein level < 100mg/24h 
In patients who lack measurable M-proteins in the serum and urine being monitored using 
FLC levels, the definition of VGPR requires > 90% decrease in the difference between 
involved and uninvolved FLC levels 
PR (Partial response) 
≥ 50% reduction of serum M-protein AND reduction in 24h urinary M-protein by ≥ 90% or 
to < 200mg per 24h AND ≥ 50% reduction in size of any soft tissue plasmacytomas, if 
present at baseline 
In patients who lack measurable M-proteins in the serum and urine being monitored using 
FLC levels, the definition of PR requires ≥ 50% decrease in the difference between involved 
and uninvolved FLC levels.  If the FLC levels were also unmeasurable at baseline, a 50% 
reduction in bone marrow plasma cells is acceptable as long as the original BM contained ≥ 
30% PCs. 
SD (Stable disease) 
Not meeting criteria for CR, VGPR, PR or PD 
PD (Progressive disease) 
Increase of ≥ 25% from baseline in any of the following: 1) serum M-protein (the absolute 
increase must be ≥ 0.5 g/dL), 2) urine M-protein (the absolute increase must be ≥ 200 
mg/24h), 3) bone marrow plasma cell percentage (absolute increase must be > 10%), 4) 
difference in the kappa and lambda FLC (absolute increase must be > 10 mg/dL; this criteria 
should only be used for patients with unmeasurable M-protein in the serum or urine) OR 
increase in the size or development of new bone lesions or soft tissue plasmacytomas OR 
development of a serum calcium > 11.5 mg/dL without other cause 
 


Ibrutinib (PCI-32765) 
20053  
06/13/2016 
Final 
 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 66 
14.4. 
Appendix 4.  Dose Diary 
Drug name:  IBRUTINIB 
How much:  
How often: ONCE EACH DAY 
MD: 
 
 
 
 
 
 
 
Phone: 
RN/Research coordinator: 
 
 
 
 
Phone: 
 
CYCLE #: 
 
Day 
Date 
Time 
Comments 
1 
 
                        : AM / PM  
2 
 
                        : AM / PM  
3 
 
                        : AM / PM  
4 
 
                        : AM / PM  
5 
 
                        : AM / PM  
6 
 
                        : AM / PM  
7 
 
                        : AM / PM  
8 
 
                        : AM / PM  
9 
 
                        : AM / PM  
10 
 
                        : AM / PM  
11 
 
                        : AM / PM  
12 
 
                        : AM / PM  
13 
 
                        : AM / PM  
14 
 
                        : AM / PM  
15 
 
                        : AM / PM  
16 
 
                        : AM / PM  
17 
 
                        : AM / PM  
18 
 
                        : AM / PM  
19 
 
                        : AM / PM  
20 
 
                        : AM / PM  
21 
 
                        : AM / PM  
22 
 
                        : AM / PM  
23 
 
                        : AM / PM  
24 
 
                        : AM / PM  
25 
 
                        : AM / PM  
26 
 
                        : AM / PM  
27 
 
                        : AM / PM  
28 
 
                        : AM / PM  
 
 


Ibrutinib (PCI-32765) 
20053  
06/13/2016 
Final 
 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 67 
14.5. 
Appendix 5.  Child-Pugh Score 
Measure 
1 point 
2 points 
3 points 
Total bilirubin, μmol/L (mg/dL) 
<34 (<2) 
34-50 (2-3) 
>50 (>3) 
Serum albumin, g/L (g/dL) 
>35 (>3.5) 
28-35 (2.8-3.5) 
<28 (<2.8) 
PT INR 
<1.7 
1.71-2.30 
>2.30 
Ascites 
None 
Mild 
Moderate to Severe 
Hepatic encephalopathy 
None 
Grade I-II (or suppressed 
with medication) 
Grade III-IV  
(or refractory) 
 
Points 
Class 
5-6 
A 
7-9 
B 
10-15 
C 
 
Source:  
1. Child CG, Turcotte JG. “Surgery and portal hypertension”. In Child CG. The liver and portal hypertension. 
Philadelphia:Saunders. 1964. pp. 50-64.   
2. Pugh RN, Murray-Lyon IM, Dawson L, Pietroni MC, Williams R . “Transection of te oesophagus for 
bleeding oesophageal varices”.  The British journal of surgery, 1973;60: 646-9. 
 
 


Ibrutinib (PCI-32765) 
20053  
06/13/2016 
Final 
 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 68 
14.6. 
Appendix 6.  ECOG Performance Status 
Status 
Eastern Cooperative Oncology Group (ECOG) Performance Status45 
0 
Fully active, able to carry on all pre-disease performance without restriction. 
1 
Restricted in physically strenuous activity but ambulatory and able to carry out work of a light 
or sedentary nature, eg, light housework, office work. 
2 
Ambulatory and capable of all self-care, but unable to carry out any work activities.  Up and 
about more than 50% of waking hours. 
3 
Capable of only limited self-care, confined to bed or chair more than 50% of waking hours. 
4 
Completely disabled.  Cannot carry on any self-care.  Totally confined to bed or chair. 
5 
Dead. 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 


Ibrutinib (PCI-32765) 
20053  
06/13/2016 
Final 
 
Protocol Version: 03 (7/17/17)  
Proprietary and Confidential 
Page 69 
14.7. 
Appendix 7.  Image Assessment of Bone Lesions 
Appendix 7.
Image Assessment of Bone Lesions
POSITIVE
NEGATIVE
PET 
• Increased focal FDG uptake within at least 
one bone corresponding to a lytic lesion  
more intense compared with liver uptake
• Increased focal uptake within at least one 
bone with no corresponding lytic lesion  more 
intense compared with the adjacent bone 
uptake (outside the areas of prior intervention, 
compression, and degenerative changes)
• Diffuse BM involvement defined as a 
homogeneous uptake in the axial and 
appendicular skeleton >> liver uptake 
(SUVmax 2-3x >liver SUVmax) or significantly 
heterogeneous uptake < 2x liver SUVmax  
• Extramedullary disease: FDG-avid soft tissue 
mass outside bony structures (not originating 
from bones)
• Any finding that does not fall 
into one of the described 
categories as outlined in the 
“positive” finding description
• All findings that correspond 
with benign osteoarthritic
changes or recent interventions 
or previous trauma
PET/MR
• Hypointense T1, Hyperintense STIR 
• Hyperintense DWI 
• Hypointense ADC 
• Hyperintense T1 Hypointense
STIR
• Hypointense DWI
• Hyperintense ADC
 
 PET portion of PET/MRI will be interpreted by a nuclear medicine physcian and 
MRI by a diagnostic radiologist 
 PET will be interpreted using the above criteria and quantitative analysis may be 
performed as a secondary step but the clinical read will rely on qualitative reading 
 Interpretation of both parts of the integrated PET/MRI will not be blinded. Both 
PET and MRI interpreter will have an access to each others’ reading. In cases 
where there is incongruency between readings a consensus will be reached by the 
two imagers