Conditions: Acute Graft-versus-host Disease
Keywords: Acute graft-versus-host disease GVHD pediatric JAK1 inhibitor corticosteroids
Allocation: NA | Intervention model: SINGLE_GROUP
Enrollment: 2
Healthy volunteers: no

Brief summary:
The purpose of this study is to evaluate itacitinib in combination with corticosteroids for the treatment of Grades II to IV acute graft-versus-host disease (aGVHD) in steroid-naive pediatric participants.

Detailed description:

Arms:
arm 1: None

Interventions: intervention 1: Itacitinib intervention 2: Corticosteroids
Intervention descriptions: intervention 1: Phase 1: Itacitinib administered orally once daily at the protocol-defined dose according to age cohort, with dose reductions or modifications based on safety assessments. Phase 2: Itacitinib administered orally once daily at the recommended dose from Phase 1. intervention 2: Phase 1 and 2: Methylprednisolone 2 mg/kg IV daily (or prednisone equivalent) or at a dose that is appropriate for the severity of disease as outlined per local treatment guidelines as background treatment.

Protocol document:
Prot_SAP_000.pdf: 
 
Official Title: 
An Open-Label, Single-Arm, Phase 1/2 Study Evaluating the Safety and 
Efficacy of Itacitinib in Combination With Corticosteroids for the Treatment 
of Steroid-Naive Acute Graft-Versus-Host Disease in Pediatric Subjects 
NCT Number: 
NCT03721965 
 
Document Date: 
 
Clinical Study Protocol Version 3: 02 JUL 2019 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 


 
 
 
 
16.1.1 
PROTOCOL AND PROTOCOL AMENDMENTS 
The documents listed below are enclosed. 
Protocol Amendment 1 – Summary of Changes  
20 NOV 2018 
Protocol Amendment 2 – Summary of Changes 
16 JAN 2019 
Protocol Amendment 3 – Summary of Changes 
02 JUL 2019 
Protocol Amendment 3 
02 JUL 2019 
Protocol Administrative Change 1 
28 OCT 2019 
 
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Clinical Study Protocol 
INCB 39110-120 
An Open-Label, Single-Arm, Phase 1/2 Study Evaluating the Safety 
and Efficacy of Itacitinib in Combination With Corticosteroids for 
the Treatment of Steroid-Naive Acute Graft-Versus-Host Disease in 
Pediatric Subjects 
Product: 
Itacitinib 
IND Number: 
113,428 
EudraCT Number: 
2018-002253-30 
Phase of Study: 
1/2 
Sponsor: 
Incyte Corporation 
1801 Augustine Cut-Off 
Wilmington, DE 19803 
Original Protocol (Version 0): 
09 JUL 2018 
Amendment (Version) 1: 
20 NOV 2018 
Amendment (Version) 2: 
16 JAN 2019 
Amendment (Version) 3: 
02 JUL 2019 
This study will be performed in accordance with ethical principles that have their origin in the Declaration of 
Helsinki and conducted in adherence to the study Protocol, applicable Good Clinical Practices, and applicable laws 
and country-specific regulations in which the study is being conducted. 
The information in this document is confidential.  No part of this information may be duplicated, referenced, or 
transmitted in any form or by any means (electronic, mechanical, photocopy, recording, or otherwise) without prior 
written consent.  
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INVESTIGATOR'S AGREEMENT 
I have read the INCB 39110-120 Protocol Amendment 3 (Version 3 dated 02 JUL 2019) and 
agree to conduct the study as outlined.  I agree to maintain the confidentiality of all information 
received or developed in connection with this Protocol. 
 
 
 
 
 
(Printed Name of Investigator) 
 
 
 
 
 
 
 
 
(Signature of Investigator) 
 
(Date) 
 
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SYNOPSIS 
Name of Investigational Product:  Itacitinib 
Title of Study:  An Open-Label, Single-Arm, Phase 1/2 Study Evaluating the Safety and Efficacy of 
Itacitinib in Combination With Corticosteroids for the Treatment of Steroid-Naive Acute 
Graft-Versus-Host Disease in Pediatric Subjects 
Protocol Number:  INCB 39110-120 
Study Phase:  1/2 
Indication:  Acute graft-versus-host disease 
 
Objectives 
Endpoints 
Phase 1 (Safety run-in for first 10 subjects in each cohort) 
Primary 
To assess the safety and tolerability of itacitinib in 
combination with corticosteroids in pediatric subjects 
with Grade II to IV steroid-naive (SN) acute 
graft-versus-host disease (aGVHD). 
• Frequency, duration, and severity of adverse events 
(AEs) and serious adverse events (SAEs) 
• Changes in vital signs and clinical evaluations. 
• Changes in clinical laboratory blood samples. 
To evaluate the pharmacokinetics (PK) of itacitinib 
when administered in combination with 
corticosteroids. 
• Cmax, Cmin, Tmax, AUC, and Cl/F assessed at Day 1, 
7, and 28. 
Secondary  
To assess the efficacy of itacitinib in combination 
with corticosteroids in terms of overall response rate 
(ORR) at Day 28 in pediatric subjects with aGVHD. 
• ORR at Day 28, defined as the proportion of 
subjects demonstrating a complete response (CR), 
very good partial response (VGPR), or partial 
response (PR). 
Phase 2 (Final analyses to combine all subjects within a cohort) 
Primary 
To assess the efficacy of itacitinib in combination 
with corticosteroids in terms of ORR at Day 28 in 
pediatric subjects with aGVHD. 
• ORR at Day 28, defined as the proportion of 
subjects demonstrating a CR, VGPR, or PR. 
Secondary 
To evaluate the PK of itacitinib when administered in 
combination with corticosteroids. 
• Cmax, Cmin, Tmax, AUC, and Cl/F assessed at Day 7. 
To evaluate additional efficacy and longer-term 
efficacy outcomes. 
• ORR, defined as the proportion of subjects 
demonstrating a CR, VGPR, or PR, at Days 14, 56, 
and 100. 
• Nonrelapse mortality (NRM) rate, defined as the 
proportion of subjects who died due to causes other 
than underlying hematological disorders at 
Months 6, 9, 12, and 24. 
• Duration of response (DOR) for responders will be 
calculated.  The DOR is defined from the time of 
the onset of response to either progression or death. 
• Time to response, defined as the interval from 
treatment initiation to first response. 
• Relapse rate of malignant and nonmalignant 
disorders, defined as the proportion of subjects 
whose underlying disease relapses. 
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• Malignant and nonmalignant disorders relapse–
related mortality rate, defined as the proportion of 
subjects whose underlying disease relapses and has 
a fatal outcome. 
• Failure-free survival rate at a timepoint, defined as 
the proportion of subjects who are still alive, have 
not relapsed, have not required additional therapy 
for aGVHD, and have not demonstrated signs or 
symptoms of chronic graft-versus-host disease 
(cGVHD). 
• Overall survival, defined as the interval from 
treatment initiation to death due to any cause. 
To assess the incidence and severity of AEs and 
SAEs. 
• Clinical safety data (eg, AEs, infections) will be 
tabulated and listed. 
To evaluate the incidence of secondary graft failure. 
• Incidence rate of secondary graft failure, defined as 
> 95% recipient cells any time after engraftment 
with no signs of relapse OR retransplantation 
because of secondary neutropenia (< 0.5 × 109/L) 
and/or thrombocytopenia (< 20 × 109/L) within 
2 months of transplant. 
To evaluate the use and discontinuation of 
corticosteroids. 
• Average and cumulative corticosteroid dose at 
Days 28, 56, 100, and 180; proportion of subjects 
who discontinue corticosteroids at Days 56 and 
100. 
To evaluate the use and discontinuation of 
immunosuppressive medications. 
• Proportion of subjects who discontinue 
immunosuppressive medication at Days 56 and 
100. 
To evaluate the incidence of aGVHD flares. 
• Incidence rate of aGVHD flares through Day 100. 
To evaluate the incidence of cGVHD. 
• Incidence rate of cGVHD at Days 180 and 365. 
 
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Overall Study Design: 
This is an open-label, single-arm, multicenter, Phase 1/2 study of itacitinib in combination with 
corticosteroids for the treatment of Grades II to IV aGVHD in SN pediatric subjects aged from 28 days 
to < 18 years old. 
This study consists of 2 phases:  Phase 1 (safety run-in) and Phase 2 (expansion).  It will be conducted 
in a staggered approach in the following 5 groups:  12 to < 18 years old (Cohort 1), 6 to < 12 years old 
(Cohort 2), 2 to < 6 years old (Cohort 3), weighing > 8 kg to < 2 years (Cohort 4), and 28 days old to 
weighing ≤ 8 kg (Cohort 5). 
Cohort 
Subjects 
in Phase 1 
Age 
Subjects 
With DLT 
Action Taken 
Additional 
Subjects in Phase 2 
1 
10 
12 to < 18 years old 
≤ 3 
Expand to Phase 2 
Proceed to Cohorts 2 and 3 
20 
> 3 
Terminate the study 
– 
2 
10 
6 to <12 years old 
≤ 3 
Expand to Phase 2 
Proceed to Cohort 4 (provided 
Cohort  3 is also completed) 
20 
> 3 
Terminate the study 
– 
3 
10 
2 to < 6 years old 
≤ 3 
Expand to Phase 2 
Proceed to Cohort 4 (provided 
Cohort 2 is also completed) 
20 
> 3 
Terminate the study 
– 
4 
10 
Weighing > 8 kg to 
< 2 years old 
≤ 3 
Expand to Phase 2 
Proceed to Cohort 5 
20 
> 3 
Terminate the study 
– 
5 
10 
28 days old to 
weighing ≤ 8 kg 
≤ 3 
Expand to Phase 2 
20 
> 3 
Terminate the study 
– 
Phase 1 
Phase 1 is a safety run-in in which 10 evaluable subjects will be assessed in each cohort for safety, 
tolerability, and PK of itacitinib in combination with corticosteroids (including AEs, SAEs, and 
clinical/laboratory assessments) using a continuous monitoring and staggered approach (Cohort 1 will 
be evaluated first, and Cohort 5 will be evaluated last).  In order to be included in the tolerability 
review, subjects must have received study treatment for at least 75% of the days (ie, 21 days) during 
the 28-day surveillance period or have experienced a dose-limiting toxicity (DLT).  Additional subjects 
may be enrolled to achieve a minimum cohort size of 10 subjects, should dropouts or dose 
interruptions/reductions result in a subject being nonevaluable. 
Treatment PK, efficacy
 will also be assessed. 
In case of toxicity, dose modifications at any timepoint will be allowed.  Dose modifications within a 
study cohort and for subsequent age-specific cohorts will be based on safety data and possibly PK data. 
Cohort 1 will be evaluated first.  Enrollment in Cohorts 2 and 3 will begin once the first 
age-appropriate formulation is available and once safety, tolerability, and PK data are obtained for 
Cohort 1, and that dose level is deemed safe and tolerated.  Enrollment in Cohort 4 will start once the 
same is completed for Cohorts 2 and 3 regarding safety, tolerability, and PK.  To start enrollment in 
Cohort 5, the same needs to be completed for Cohort 4, and, additionally, the second age-appropriate 
formulation (eg, sustained-release liquid formulation) needs to be available. 
An independent Data Monitoring Committee (DMC) will perform a review of safety, tolerability, and 
PK data. 
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Phase 2 
Phase 2 will be expanded to a total of approximately 30 subjects for each cohort; it will include 
subjects who were treated in Phase 1 at the dose level that was deemed safe and tolerated and was 
supported by PK. 
Subjects in Phase 2 will be evaluated for efficacy and safety.  Pharmacokinetic data will also be 
collected in Phase 2. 
Subjects will receive study treatment until treatment failure (including progression of disease and lack 
of response), unacceptable toxicity, completion of taper, or death.  Transfusion support and continued 
use of anti-infective medications, GVHD prophylaxis medications (including calcineurin inhibitors), 
and topical steroid therapies are permitted. 
GVHD staging and grading will be assessed as per Mount Sinai Acute GVHD International 
Consortium (MAGIC) criteria; safety and tolerability will be assessed as per National Cancer Institute 
Common Terminology Criteria for Adverse Events v4.03. 
Study Population: 
Subjects who have received an allogeneic hematopoietic stem cell transplant (allo-HSCT) and have 
developed Grade II to IV aGVHD may be eligible candidates for treatment per this Protocol. 
Key Inclusion Criteria: 
• Male and female subjects: 
- 12 to < 18 years old (Cohort 1) 
- 6 to < 12 years old (Cohort 2) 
- 2 to < 6 years old (Cohort 3) 
- Weighing > 8 kg to < 2 years old (Cohort 4) 
- 28 days old to weighing ≤ 8 kg (Cohort 5) 
• Undergone 1 allo-HSCT from any donor HLA type (related or unrelated donor with any degree of 
HLA matching) using any graft source (bone marrow, peripheral blood stem cells, or cord blood).  
Recipients of myeloablative and reduced-intensity conditioning regimens are eligible. 
• Clinically suspected Grade II to IV aGVHD as per MAGIC criteria, occurring after allo-HSCT and 
any GVHD prophylactic medication.  Efforts should be made to obtain biopsies to pathologically 
confirm aGVHD.  In cases where a biopsy is negative, unable to be obtained, or clinically 
contraindicated, clinical suspicion of aGVHD by the treating physician is sufficient, provided that 
alternative diagnoses of drug effects or infection are adequately ruled out. 
• Evidence of myeloid engraftment (eg, absolute neutrophil count [ANC] ≥ 0.5 × 109/L for 
3 consecutive assessments if ablative therapy was previously used).  Use of growth factor 
supplementation is allowed. 
• Glomerular filtration rate (GFR) > 50 mL/min/1.73 m2 as estimated using modified Schwartz 
formula. 
• May be applicable to Cohort 1:  be willing to avoid pregnancy or fathering children based on 1 of the 
following criteria: 
- Females of nonchildbearing potential (ie, surgically sterile with a hysterectomy and/or bilateral 
oophorectomy OR ≥ 12 months of primary amenorrhea). 
- Females of childbearing potential who have a negative serum pregnancy test at screening and who 
agrees to take appropriate precautions to avoid pregnancy (with at least 99% certainty) from 
screening through safety follow-up.  Permitted methods that are at least 99% effective in 
preventing pregnancy should be communicated to the subject and her understanding confirmed. 
- Males of fathering potential who agree to take appropriate precautions to avoid fathering children 
(with at least 99% certainty) from screening through safety follow-up.  A male is considered fertile 
after puberty unless permanently sterile by bilateral orchiectomy.  Permitted methods that are at 
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least 99% effective in preventing pregnancy should be communicated to the subject and their 
understanding confirmed. 
• Subject (parent or legal guardian) is able to give written informed consent and assent (as appropriate) 
according to institutional standards and to comply with all study visits and procedures. 
• Able to swallow and retain oral medication. 
Key Exclusion Criteria: 
• More than 1 allo-HSCT. 
• Received more than 2 days of systemic corticosteroids for aGVHD before the first study drug 
administration. 
• Presence of GVHD overlap syndrome. 
• Presence of an active uncontrolled infection, defined as hemodynamic instability attributable to 
sepsis or new symptoms, worsening physical signs, or radiographic findings attributable to infection.  
Persisting fever without signs or symptoms will not be interpreted as an active uncontrolled 
infection. 
• Known HIV infection. 
• Active hepatitis B virus (HBV) or hepatitis C virus (HCV) infection that requires treatment or at risk 
for HBV reactivation (ie, positive hepatitis B surface antigen [HBsAg] and/or positive total hepatitis 
B core antibody).  Prior test results obtained as part of standard of care before allo-HSCT confirming 
that a subject is immune and not at risk for reactivation may be used for purposes of eligibility, and 
tests do not need to be repeated. 
• Subjects with evidence of relapsed primary disease, or subjects who have been treated for relapse 
after the allo-HSCT was performed. 
• Any corticosteroid therapy for indications other than GVHD at doses > 1 mg/kg per day of 
methylprednisolone (or equivalent) within 7 days of the first study drug administration. 
• Severe organ dysfunction unrelated to underlying GVHD, including the following: 
- Abnormal liver function, defined as total bilirubin > 1.5 × upper limit of normal (ULN; unless 
elevated bilirubin is attributed to Gilbert’s syndrome) and/or alanine aminotransferase/aspartate 
aminotransferase > 2.5 × ULN. 
- Clinically significant or uncontrolled cardiovascular disease, including unstable angina, acute 
myocardial infarction within 6 months from Study Day 1, New York Heart Association Class III or 
IV congestive heart failure, circulatory collapse requiring vasopressor or inotropic support, or 
arrhythmia that requires therapy. 
- Clinically significant respiratory disease that requires mechanical ventilation support or ≥ 50% 
oxygen. 
• May be applicable for Cohort 1:  currently breast feeding. 
• Receipt of live (including attenuated) vaccines or anticipation of need for such vaccines during the 
study. 
• Receipt of Janus kinase (JAK) inhibitor therapy after allo-HSCT for any indication.  Treatment with 
a JAK inhibitor before allo-HSCT is permitted. 
• Treatment with any other investigational agent, device, or procedure within 21 days (or 5 half-lives, 
whichever is greater) of enrollment.  Subjects participating in a GVHD prophylaxis study or 
conditioning regimen should be discussed with the sponsor's medical monitor before enrollment. 
• Any medical complications or conditions that would, in the investigator's judgment, interfere with 
full participation in the study, including administration of study treatment and attending required 
study visits; pose a significant risk to the subject; or interfere with interpretation of study data. 
• Known allergies, hypersensitivity, or intolerance to any of the study medications, excipients, or 
similar compounds. 
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Study Drug, Dosage, and Mode of Administration: 
The following recommended doses are based on simulation and include assumptions regarding the 
relationship between age/weight and clearance and relative bioavailability of the yet-to-be-developed 
age-appropriate formulations.  As data become available regarding these assumptions, dosing 
recommendations may change.  
• 12 to < 18 years old (Cohort 1):  Subjects will receive oral itacitinib at a dose level of 200 mg once 
daily (QD; 2 × 100 mg tablets). 
• 6 to < 12 years old (Cohort 2):  Subjects will receive oral itacitinib at a dose level of 100 mg QD 
(1 × 100 mg tablet or first age-appropriate formulation). 
• 2 to < 6 years old (Cohort3):  Subjects will receive oral itacitinib at a dose level of 50 mg QD (first 
age-appropriate formulation)  or 2 × 25 mg tablets. 
• Weighing > 8 kg to < 2 years old (Cohort 4):  Subjects will receive oral itacitinib at a dose level of 
35 mg QD (first age-appropriate formulation). 
• 28 days old to weighing ≤ 8 kg (Cohort 5):  Subjects will receive oral itacitinib at a dose level of 
1.4 mg/kg QD (second age-appropriate formulation). 
Note:  Proposed formulation could be adapted based on the development of the 25 mg tablet and 
age-appropriate formulations. 
In all 5 cohorts, subjects may have dose modifications during the course of treatment based on safety, 
tolerability, and PK assessments. 
Reference Therapy, Dosage, and Mode of Administration: 
All subjects will receive methylprednisolone 2 mg/kg IV daily (or prednisone equivalent) or at a dose 
that is appropriate for the severity of disease as outlined per local treatment guidelines as background 
treatment.  Subjects who previously began corticosteroid therapy at a different dose may remain on 
that dose if considered clinically appropriate by the treating physician.  Corticosteroids should be 
tapered as tolerated according to institutional guidelines at a rate that is commensurate with resolution 
of GVHD manifestations. 
If GVHD flares during the taper of corticosteroids, the dose may be re-escalated at the investigator's 
discretion and will not be considered treatment failure, as long as the dose does not exceed the initial 
starting dose.  If the dose required exceeds this threshold, the flare is not responsive to increased 
corticosteroids, or multiple flares are observed, then the subject will be considered to have experienced 
treatment failure. 
Estimated Duration of Participation:  Subject participation is expected to average 12 months and 
includes the following:  
• A screening period lasting up to 28 days. 
• A treatment period lasting as long as the subject is benefiting from treatment. 
• A safety follow-up period lasting 30 to 35 days after treatment ends. 
• A survival follow-up period lasting until death, the end of the study, or study withdrawal. 
Estimated Number of Subjects:  Approximately 150 pediatric subjects. 
Principal Coordinating Investigator:  
, MD, PhD, 
 
, France. 
Statistical Methods: 
Approximately 150 pediatric subjects will be enrolled into the study.  Sample size is based on the 
clinical feasibility and consideration. 
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Phase 1: 
Ten subjects will be enrolled into each cohort (Cohort 1:  12 to < 18 years old, Cohort 2:  6 to 
< 12 years old, Cohort 3:  2 to < 6 years old, Cohort 4:  weighing > 8 kg  to < 2 years old, and 
Cohort 5:  28 days old to weighing ≤ 8 kg).  All AEs and all SAEs will be summarized.  Dose-limiting 
toxicity will be defined as the occurrence of any of the toxicities below, occurring up to and including 
Day 28: 
• Grade 4 neutropenia lasting more than 7 days or a ≥ 90% decrease in ANC from baseline  
• Platelet count < 10 × 109/L that can be reasonably attributed to study treatment, and does not recover 
after 2 weeks.  Recovery is defined as platelets ≥ 20 × 109/L in the absence of platelet transfusion in 
the 7 days preceding the platelet recovery date.  In case the platelet count was < 20 × 109/L at 
baseline, they should at least reach the baseline level. 
• Secondary graft failure, defined as > 95% recipient cells any time after engraftment with no signs of 
relapse, or retransplantation because of secondary neutropenia (< 0.5 × 109/L) and/or 
thrombocytopenia (< 30 × 109/L). 
• Any ≥ Grade 3 nonhematologic toxicities that can be reasonably attributed to study treatment 
Any ≥ Grade 3 nonhematologic toxicities that may be related to underlying GVHD (eg, nausea, 
vomiting, diarrhea, and rash) will not be considered as DLTs. 
• Any ≥ Grade 3 clinical chemistry laboratory abnormalities that are considered clinically significant 
and that can be reasonably attributed to study treatment.  Transient (≤ 72 hours) abnormal laboratory 
values without associated clinically significant signs and symptoms and not leading to 
hospitalization will not be considered as DLTs. 
• Any toxicity that can be reasonably attributed to study treatment and leading to treatment 
discontinuation for more than 2 weeks. 
Changes in vital signs, clinical evaluations, and clinical laboratory values will be summarized. 
Within each cohort, among the first 10 subjects enrolled in Phase 1 and evaluable for DLT, if there are 
more than 3 subjects with any DLT events occurring in the 28-day surveillance period, the study will 
be terminated.  A cohort can be expanded and proceed to subsequent steps if 3 or fewer out of 
10 subjects in the cohort have a DLT occurring in the 28-day surveillance period. 
The DMC will meet periodically review safety, tolerability, and PK data, and potential dose 
modification decisions will be made based on the findings. 
Phase 2: 
Thirty subjects will be enrolled into each cohort (Cohort 1:  12 to < 18 years old, Cohort 2:  6 to 
< 12 years old, Cohort 3:  2 to < 6 years old, Cohort 4:  weighing > 8 kg to < 2 years old, and 
Cohort 5:  28 days old to weighing ≤ 8 kg).  This includes the subjects from Phase 1 from each age 
group.  One hundred fifty pediatric subjects will be enrolled into the study.  Sample size is based on the 
clinical feasibility and consideration.  Approximately 150 pediatric subjects are planned for the final 
analysis of the primary endpoint of ORR. 
Descriptive statistics (eg, mean, standard deviation, and range) will be provided by dose and age group 
where appropriate.  Subject enrollment, disposition, demographics, and medical history will be 
summarized at baseline.  All efficacy measures (eg, ORR, NRM rate, relapse rate, DOR, and 
relapse-related mortality) will be summarized.  Kaplan-Meier plots or cumulative incidence function 
plots will be provided.  Dose exposure will be calculated.  Safety and disease response data will be 
compared over time to assess change from baseline during treatment and at follow-up.  
Pharmacokinetic data will be analyzed using standard noncompartmental methods along with 
development of a compartmental population PK model. 
 
 
 
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TABLE OF CONTENTS 
SYNOPSIS ......................................................................................................................................3 
LIST OF ABBREVIATIONS ........................................................................................................16 
1. 
INTRODUCTION ......................................................................................................19 
1.1. 
Overview of Acute Graft-Versus-Host Disease .........................................................19 
1.2. 
First-Line Treatment of Acute Graft-Versus-Host Disease ........................................21 
1.3. 
Itacitinib Background .................................................................................................21 
1.3.1. 
Pharmacology .............................................................................................................21 
1.3.2. 
Clinical Studies ...........................................................................................................22 
1.4. 
Study Rationale ...........................................................................................................22 
1.4.1. 
Animal Studies in Acute Graft-Versus-Host Disease Models ....................................23 
1.4.2. 
Clinical Experience With Janus Kinase Inhibitors for the Treatment of 
Graft-Versus-Host Disease .........................................................................................26 
1.4.3. 
Rationale for Chosen Endpoints .................................................................................27 
1.4.4. 
Dose Rationale ............................................................................................................28 
1.5. 
Potential Risks and Benefits of the Treatment Regimen ............................................31 
2. 
STUDY OBJECTIVES AND ENDPOINTS ..............................................................33 
3. 
SUBJECT ELIGIBILITY ...........................................................................................35 
3.1. 
Subject Inclusion Criteria ...........................................................................................35 
3.2. 
Subject Exclusion Criteria ..........................................................................................36 
3.3. 
Lifestyle Considerations .............................................................................................37 
3.3.1. 
Meals and Dietary Restrictions ...................................................................................37 
3.3.2. 
Activity .......................................................................................................................37 
4. 
INVESTIGATIONAL PLAN .....................................................................................37 
4.1. 
Overall Study Design ..................................................................................................37 
4.1.1. 
Phase 1 ........................................................................................................................38 
4.1.2. 
Phase 2 ........................................................................................................................39 
4.2. 
Measures Taken to Avoid Bias ...................................................................................39 
4.3. 
Number of Subjects ....................................................................................................39 
4.3.1. 
Planned Number of Subjects ......................................................................................39 
4.3.2. 
Replacement of Subjects .............................................................................................40 
4.4. 
Duration of Treatment and Subject Participation .......................................................40 
4.5. 
Overall Study Duration ...............................................................................................40 
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4.6. 
Study Termination ......................................................................................................40 
5. 
TREATMENT ............................................................................................................41 
5.1. 
Study Drug and Treatment Assignment .....................................................................41 
5.1.1. 
Subject Numbering and Treatment Assignment .........................................................41 
5.1.2. 
Randomization and Blinding ......................................................................................41 
5.2. 
Study Drug ..................................................................................................................41 
5.2.1. 
Description and Administration ..................................................................................41 
5.2.2. 
Supply, Packaging, and Labeling ...............................................................................42 
5.2.3. 
Storage ........................................................................................................................42 
5.2.4. 
Instruction to Subjects for Handling Itacitinib ...........................................................42 
5.3. 
Background Treatment (Corticosteroids) ...................................................................43 
5.3.1. 
Prednisone ...................................................................................................................43 
5.3.1.1. 
Description ..................................................................................................................43 
5.3.1.2. 
Supply, Packaging, and Labeling ...............................................................................43 
5.3.1.3. 
Storage ........................................................................................................................43 
5.3.2. 
Methylprednisolone ....................................................................................................43 
5.3.2.1. 
Description ..................................................................................................................43 
5.3.2.2. 
Supply, Packaging, and Labeling ...............................................................................44 
5.3.2.3. 
Storage ........................................................................................................................44 
5.3.3. 
Starting Dose and Administration of Corticosteroids .................................................44 
5.4. 
Prophylactic and Supportive Care Medications .........................................................44 
5.5. 
Treatment Compliance ................................................................................................44 
5.6. 
Treatment Interruptions and Adjustments ..................................................................45 
5.6.1. 
Dose Modifications .....................................................................................................45 
5.6.2. 
Dose-Limiting Toxicity ..............................................................................................45 
5.6.2.1. 
Follow-Up of Dose-Limiting Toxicities .....................................................................46 
5.6.3. 
Criteria and Procedures for Dose Interruptions and Modifications of 
Itacitinib ......................................................................................................................46 
5.6.4. 
Tapering of Itacitinib ..................................................................................................48 
5.6.5. 
Criteria for Permanent Discontinuation of Itacitinib ..................................................49 
5.6.6. 
Criteria and Procedures for Dose Interruptions or Modifications of 
Corticosteroids ............................................................................................................49 
5.7. 
Withdrawal of Subjects From Study Treatment .........................................................49 
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5.7.1. 
Withdrawal Criteria ....................................................................................................49 
5.7.2. 
Withdrawal Procedures ...............................................................................................50 
5.7.3. 
Study Completion .......................................................................................................50 
5.7.4. 
Concomitant Medications ...........................................................................................51 
5.7.4.1. 
Permitted Medications ................................................................................................51 
5.7.5. 
Restricted Medications ...............................................................................................51 
5.7.6. 
Prohibited Medications ...............................................................................................51 
6. 
STUDY ASSESSMENTS ..........................................................................................52 
6.1. 
Screening ....................................................................................................................58 
6.2. 
Treatment ....................................................................................................................58 
6.3. 
End of Treatment ........................................................................................................58 
6.4. 
Re-Treatment ..............................................................................................................58 
6.5. 
Follow-Up ...................................................................................................................59 
6.5.1. 
Safety Follow-Up ........................................................................................................59 
6.5.2. 
Post-Treatment GVHD Follow-Up .............................................................................59 
6.5.3. 
Survival Follow-Up ....................................................................................................59 
6.6. 
Unscheduled Visits .....................................................................................................59 
7. 
CONDUCT OF STUDY ASSESSMENTS AND PROCEDURES ...........................60 
7.1. 
Administration of Informed Consent Form ................................................................60 
7.2. 
Interactive Web Response Technology Procedure .....................................................60 
7.3. 
Demography and Medical History ..............................................................................60 
7.3.1. 
Demographics and General Medical History .............................................................60 
7.3.2. 
Disease Characteristics and Treatment History ..........................................................60 
7.4. 
Prior and Concomitant Medications and Procedures ..................................................60 
7.5. 
Safety Assessments .....................................................................................................61 
7.5.1. 
Adverse Events ...........................................................................................................61 
7.5.2. 
Physical Examination .................................................................................................61 
7.5.3. 
Vital Signs ..................................................................................................................61 
7.5.4. 
Eastern Cooperative Oncology Group and Lansky Scale Performance Status ..........61 
7.5.5. 
Twelve-Lead Electrocardiograms ...............................................................................62 
7.5.6. 
Laboratory Assessments .............................................................................................62 
7.5.6.1. 
Chemistry ....................................................................................................................63 
7.5.6.2. 
Hematology .................................................................................................................63 
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7.5.6.3. 
Pregnancy Testing ......................................................................................................63 
7.5.6.4. 
Hepatitis Screening .....................................................................................................63 
7.5.6.5. 
HIV Screening ............................................................................................................63 
7.5.6.6. 
Adenovirus, EBV, and CMV Assessment ..................................................................63 
7.6. 
Efficacy Assessments .................................................................................................64 
7.6.1. 
Acute Graft-Versus-Host Disease Staging and Grading ............................................64 
7.6.2. 
Chronic Graft-Versus-Host Disease Assessment .......................................................65 
7.6.3. 
Graft Failure and Donor Chimerism ...........................................................................65 
7.6.4. 
Post-Transplant Lymphoproliferative Disorder Assessment ......................................65 
7.6.5. 
Relapse/Recurrence of Underlying Hematologic Disease ..........................................66 
 
66 
 
66 
 
66 
7.7. 
Pharmacokinetic Assessments ....................................................................................66 
7.7.1. 
Blood Sample Collection ............................................................................................66 
7.7.2. 
Bioanalytical Methodology and Analysis ...................................................................67 
 
67 
8. 
SAFETY MONITORING AND REPORTING .........................................................68 
8.1. 
Adverse Events ...........................................................................................................68 
8.1.1. 
Definitions ..................................................................................................................68 
8.1.2. 
Reporting ....................................................................................................................68 
8.2. 
Laboratory Test Abnormalities ...................................................................................69 
8.3. 
Serious Adverse Events ..............................................................................................70 
8.3.1. 
Definitions ..................................................................................................................70 
8.3.2. 
Reporting ....................................................................................................................70 
8.4. 
Emergency Unblinding of Treatment Assignment .....................................................71 
8.5. 
Pregnancy ...................................................................................................................72 
8.6. 
Warnings and Precautions ..........................................................................................72 
8.7. 
Data Monitoring Committee .......................................................................................72 
8.8. 
Product Complaints ....................................................................................................72 
9. 
STATISTICS ..............................................................................................................73 
9.1. 
Study Populations .......................................................................................................73 
9.2. 
Selection of Sample Size ............................................................................................73 
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9.3. 
Level of Significance ..................................................................................................74 
9.4. 
Statistical Analyses .....................................................................................................74 
9.4.1. 
Primary Analyses ........................................................................................................74 
9.4.2. 
Secondary Analyses ....................................................................................................74 
 
75 
9.5. 
Safety Analyses ..........................................................................................................76 
9.5.1. 
Adverse Events ...........................................................................................................76 
9.5.2. 
Clinical Laboratory Tests ...........................................................................................76 
9.5.3. 
Vital Signs ..................................................................................................................76 
9.5.4. 
Electrocardiograms .....................................................................................................76 
9.6. 
Pharmacokinetic and Pharmacokinetic/Pharmacodynamic Analyses ........................77 
 
78 
9.8. 
Toxicity Monitoring ....................................................................................................78 
9.9. 
Analyses for the Data Monitoring Committee ............................................................78 
9.10. 
Interim Analysis ..........................................................................................................78 
10. 
ETHICAL CONSIDERATIONS AND ADMINISTRATIVE 
PROCEDURES ..........................................................................................................79 
10.1. 
Investigator Responsibilities .......................................................................................79 
10.2. 
Accountability, Handling, and Disposal of Study Drug .............................................80 
10.3. 
Data Management .......................................................................................................81 
10.4. 
Data Privacy and Confidentiality of Study Records ...................................................81 
10.5. 
Financial Disclosure ...................................................................................................82 
10.6. 
Publication Policy .......................................................................................................82 
11. 
REFERENCES ...........................................................................................................83 
APPENDIX A. MAGIC CRITERIA FOR STAGING AND GRADING FOR ACUTE 
GVHD .........................................................................................................................87 
 
89 
APPENDIX C. INFORMATION REGARDING EFFECTIVENESS OF 
CONTRACEPTIVE METHODS ...............................................................................93 
APPENDIX D. MODIFIED SCHWARTZ FORMULA ............................................................94 
APPENDIX E. PROTOCOL AMENDMENT SUMMARY OF CHANGES ............................95 
 
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LIST OF TABLES 
Table 1: 
Study Objectives and Endpoints .................................................................................33 
Table 2: 
Overall Study Flow .....................................................................................................38 
Table 3: 
Guidelines for Interruption and Restarting of Itacitinib .............................................47 
Table 4: 
Potential Dose Reduction and Increase Levels for Itacitinib ......................................48 
Table 5: 
Schedule of Assessments ............................................................................................53 
Table 6: 
Laboratory Assessments .............................................................................................55 
Table 7: 
Clinical Laboratory Analytes ......................................................................................57 
Table 8: 
Eastern Cooperative Oncology Group Performance Status Grades 
(Age ≥ 16 Years) ........................................................................................................61 
Table 9: 
Lansky Scale (Age < 16 Years) ..................................................................................62 
Table 10: Pharmacokinetic Sample Collection Time and Windows for Phase 1 .......................67 
Table 11: Pharmacokinetic Sample Collection Time and Windows for Phase 2 .......................67 
 
LIST OF FIGURES 
Figure 1: 
Effect of Ruxolitinib on Survival in Mice After Allo-HSCT .....................................24 
Figure 2: 
Ruxolitinib Maintains a Beneficial Graft-Versus-Tumor Effect as 
Determined by Bioluminescence Imaging in the A20 Leukemia Model ...................24 
Figure 3: 
Effect of Itacitinib on Survival (Top Panel) and GVHD Score (Bottom 
Panel) in Mice After Allo-HSCT ................................................................................25 
Figure 4: 
Simulated Median and 95% Prediction Interval of Exposures in Children 
Ages 2 to 5 Years Receiving 50 mg QD, 6 to 11 Years Receiving 100 mg 
QD, and 12 Years and Older Receiving 200 mg QD Compared With Adults 
With GVHD ................................................................................................................30 
Figure 5: 
Simulated Median and 95% Prediction Interval of Exposures in Children 
Weighing ≤ 8 kg Receiving 1.4 mg/kg or Children Weighing > 8 kg 
Receiving 35 mg Compared With Adults With GVHD .............................................31 
 
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LIST OF ABBREVIATIONS 
The following abbreviations and special terms are used in this clinical study Protocol. 
Abbreviation 
Definition 
AE 
adverse event 
aGVHD 
acute graft-versus-host disease 
allo-HSCT 
allogeneic hematopoietic stem cell transplantation 
ALT 
alanine aminotransferase 
ANC 
absolute neutrophil count 
AST 
aspartate aminotransferase 
AUC 
area under the plasma or serum concentration-time curve 
BID 
twice daily 
BSA 
body surface area 
CFR 
Code of Federal Regulations 
cGVHD 
chronic graft-versus-host disease 
CI 
confidence interval 
CIBMTR 
Center for International Blood and Marrow Transplant Research 
Cl/F 
apparent oral dose clearance 
Cmax 
maximum observed plasma or serum concentration 
Cmin 
minimum observed plasma or serum concentration 
CMV 
cytomegalovirus 
CR 
complete response 
CTCAE 
Common Terminology Criteria for Adverse Events 
CYP 
cytochrome P450 
 
 
DLT 
dose-limiting toxicity 
DMC 
Data Monitoring Committee 
DNA 
deoxyribonucleic acid 
DOR 
duration of response 
EBV 
Epstein-Barr virus 
ECG 
electrocardiogram 
ECOG 
Eastern Cooperative Oncology Group 
eCRF 
electronic case report form 
EDC 
Electronic Data Capture 
EOT 
end of treatment 
FDA 
Food and Drug Administration 
FFS 
failure-free survival 
GCP 
Good Clinical Practice 
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Abbreviation 
Definition 
GFR 
glomerular filtration rate 
GI 
gastrointestinal 
GMR 
geometric mean ratio 
GVH 
graft versus host 
GVHD 
graft-versus-host disease 
GVT 
graft versus tumor  
HBsAg 
hepatitis B surface antigen 
HBV 
hepatitis B virus 
HCV 
hepatitis C virus 
HIPAA 
Health Insurance Portability and Accountability Act of 1996 
HIV 
human immunodeficiency virus 
HLA 
human leukocyte antigen 
HSCT 
hematopoietic stem cell transplant 
IB 
Investigator's Brochure 
IC50 
half-maximal inhibitory concentration 
ICCC 
In-Country Caretaker for Clinical trial 
ICF 
informed consent form  
ICH 
International Conference on Harmonisation 
IEC 
independent ethics committee 
IFN-γ 
interferon-γ 
IFN-γR 
interferon-γ receptor 
IL 
interleukin 
IL-2R 
interleukin 2 receptor 
IN 
Investigator Notification 
IRB 
institutional review board 
IRT 
interactive response technology 
JAK 
Janus kinase  
LFT 
liver chemistry test 
MAGIC 
Mount Sinai Acute GVHD International Consortium 
MedDRA 
Medical Dictionary for Regulatory Activities 
MHC 
major histocompatibility 
NCI 
National Cancer Institute 
NIH 
National Institutes of Health 
NR 
no response 
NRM 
nonrelapse mortality 
ORR 
overall response rate 
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Abbreviation 
Definition 
pcVPC 
prediction-corrected visual predictive check 
PD-1 
programmed cell death-1 
PI3Kδ 
phosphoinositide 3-kinase δ 
PK 
pharmacokinetic 
PR 
partial response 
PTLD 
post-transplant lymphoproliferative disorder 
QD 
once daily 
 
 
RBC 
red blood cell 
RNA 
ribonucleic acid 
SAE 
serious adverse event 
SN 
steroid-naive 
SR 
steroid-refractory 
STAT 
signal transducers and activators of transcription 
TEAE 
treatment-emergent adverse event 
Tmax 
time to maximum concentration 
TNF 
tumor necrosis factor 
Treg 
regulatory T cell 
TYK 
tyrosine kinase 
ULN 
upper limit of normal 
VGPR 
very good partial response 
VPC 
visual prediction check 
WBC 
white blood cell 
 
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1. 
INTRODUCTION 
1.1. 
Overview of Acute Graft-Versus-Host Disease 
Allogeneic hematopoietic stem cell transplantation is an effective immunotherapy for human 
cancer (Appelbaum 2007).  More than 32,000 allo-HSCTs are performed each year worldwide, 
primarily for the treatment of hematologic malignancies (Niederwieser et al 2016).  Acute 
GVHD and cGVHD remain major contributors to transplantation-related deaths and the most 
significant barrier to successful allo-HSCT.  GVHD occurs when donor-derived immune cells 
recognize the transplant recipient (the host) as foreign, thereby initiating an immune reaction and 
subsequent inflammatory cascade that results in varying degrees of tissue damage and potential 
organ failure in the transplant recipient.  Despite prophylactic treatments with 
immunosuppressive agents, approximately 50% of transplantation recipients develop GVHD.  
Risk factors associated with aGVHD include donor/recipient HLA mismatch, increased age 
(donor or recipient), sex, intensity of the pretransplant conditioning regimen, and donor source 
(Jagasia et al 2012, Flowers et al 2011).  Most GVH reactions are undesirable and affect multiple 
organs; however, GVH reactions against hematopoietic tissue targets are desirable and critical 
for the cure of hematologic malignancies (ie, the GVT effect) and for donor 
immune-hematopoietic system engraftment.  These disparate effects of GVH reactions are 
difficult to separate, and any strategies directed against GVHD may adversely affect survival by 
increasing malignancy relapse, graft rejection, and the frequency and severity of infections 
(Pavletic and Fowler 2012). 
There are few therapeutic studies for aGVHD, and currently no agents are approved by the FDA 
for either prevention or treatment of aGVHD (Martin et al 2009).  In the EU, cyclosporine is 
approved for the treatment of GVHD.  At diagnosis, the extent of individual organ involvement 
and overall grade of aGVHD should be documented, taking into account all organ involvement, 
as this has prognostic significance.  Acute GVHD diagnosis should be confirmed by biopsy of an 
affected organ if possible; in addition, other non-GVHD complications involving the skin, liver, 
and GI tract should be ruled out.  Although diagnostic biopsies are highly specific if current 
histopathology criteria are used, the sensitivity of these biopsies is only approximately 60%; 
therefore, the ultimate aGVHD diagnosis and decision to treat systemically is based on careful 
integration of all available clinical information (Weisdorf et al 2003). 
The severity of aGVHD is graded according to the degree of involvement of the skin, liver, and 
GI tract.  Two of the more traditionally-used grading systems are the Glucksberg system (I-IV, 
Glucksberg et al 1974) and the International Bone Marrow Transplant Research system (A-D; 
Rowlings et al 1997).  These grading systems have evolved over time through the efforts of 
NIH working groups to reflect the inclusion of persistent nausea with histologic evidence of 
GVHD as Stage 1 upper GI aGVHD (Przepiorka et al 1995) and standardization of collecting 
complex clinical data from multiple organ systems (Harris et al 2016). 
It has been well-established that patients with severe (clinical Grades III-IV) aGVHD are less 
responsive to steroids, leading to poorer survival and higher transplant-related mortality than 
patients with Grade I to II disease.  However, clinical observations suggest there is a subset of 
moderately severe (Grade II) patients who are at higher risk of treatment-related mortality 
compared with patients with standard-risk aGVHD (MacMillan et al 2015).  The limited efficacy 
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observed with current therapeutic options highlights the need to identify more effective treatment 
for these patients. 
There are many similarities between pediatric and adult populations for GVHD, and there are 
some variables in pediatric patients that contribute to unique clinical features, diagnostic criteria, 
and treatment of pediatric aGVHD (Carlberg et al 2017).  
As in adults, the most significant risk factor for aGVHD in pediatric patients is HLA mismatch 
between the donor and recipient.  Comparable additional clinical, genetic, and biomarker-based 
risk factors have been postulated in both patient populations (Carlberg et al 2017).  
T-cell activation plays a significant role in antigen recognition and subsequent immunological 
responses.  In aGVHD, activated donor T cells damage host epithelial cells and the subsequent 
activation results in the release of inflammatory mediators that drive aGVHD (Jacobsohn and 
Vogelsang 2007).  Based on this understanding, the source of HSC and T cell diversity is 
important to T-cell reconstitution and subsequent inflammatory response.  Despite differences in 
thymic function, T-cell maturity, and T-cell diversity; adult and pediatric populations with 
aGVHD present similar clinical manifestations after HSCT. 
The classic target organs for aGVHD, in both children and adults, are the skin (severity ranging 
from maculopapular rash to erythroderma and bullae formation), the GI tract (resulting in 
nausea, vomiting, abdominal cramps, or diarrhea), and the liver (resulting in hyperbilirubinemia, 
jaundice, or elevated transaminases).  The hematopoietic system can also be targeted, resulting in 
complete donor lymphohematopoietic chimerism and the GVT response against hematologic 
malignancies.  Endothelium, lungs, and other organs can also be targeted, although skin, gut, and 
liver involvement are the only organs scored in the current grading system.  Infectious 
exanthema occur more commonly in children (Carlberg et al 2017), and solid-organ transplant 
and HSCT recipients are at increased risk for HHV6 and HHV7 reactivation, making infectious 
etiologies important to consider. 
The grading and staging criteria to assess the severity of aGVHD described above (MAGIC 
criteria) are also used for the pediatric population with aGVHD.  An additional consideration 
when staging pediatric aGVHD is the difference in the distribution of BSA between adults and 
children, as children have larger heads and smaller extremities than adults (Carlberg et al 2017). 
Pediatric patients have a lower incidence of aGVHD than adults, and the incidence is the lowest 
in the youngest patients below the age of 2 (Carlberg et al 2017).  Decreased incidence of 
aGVHD is primarily due to a lower incidence of HSCT in the context of hematological 
malignancies in pediatric patients below the age of 2.  Additionally, low incidence is expected, 
because the patients require time to develop malignancy, to receive conventional chemotherapy, 
to receive an allograft, and finally to develop aGVHD (Jacobsohn and Vogelsang 2007, Carlberg 
et al 2017). 
The incidence of Grade II to IV aGVHD ranges from 40% to 85%, depending on the degree of 
HLA mismatch in children receiving unrelated bone marrow transplantation, and is 
approximately 27% in those receiving grafts from HLA-identical siblings (Carlberg et al 2017).  
There is greater tolerance of the same degree of HLA mismatch in cord blood transplants over 
bone marrow transplants, with the reported incidence of aGVHD ranging from 19% to 41%.  
T-cell–depleted grafts also decrease the incidence of aGVHD, with an incidence of 19% in one 
study (Rocha et al 2000). 
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1.2. 
First-Line Treatment of Acute Graft-Versus-Host Disease 
First line or initial treatment with corticosteroids remains the standard of care for aGVHD, 
including for pediatric patients (Carlberg et al 2017).  Current guidelines from the American 
Society for Bone Marrow Transplant and the European Group for Blood and Marrow 
Transplantation recommend the use of methylprednisolone 2 mg/kg per day (or an equivalent 
dose of prednisone) as the starting dose for patients with Grades II to IV aGVHD; lower doses 
may be appropriate for patients with Grade II disease depending on risk status.  Corticosteroids 
are therefore considered the current standard care for aGVHD and will be used as background 
treatment it this study.  Tapering of corticosteroids should begin as soon as the manifestations of 
GVHD begin to show substantial improvement (Martin et al 2012, Ruutu et al 2014). 
Because only approximately 50% of aGVHD patients respond to systemic steroids, and many of 
these responses are not durable, attempts have been made to evaluate the addition of other agents 
to corticosteroids, including antibodies directed against IL-2R, high-dose steroids, horse 
antithymocyte globulin, anti–tumor necrosis factor drugs, mycophenolate mofetil, pentostatin, 
and sirolimus (Cahn et al 1995, Lee et al 2004, Cragg et al 2000, Couriel et al 2009, Levine et al 
2008, Alousi et al 2009, Pidala et al 2009).  In most cases, the second agent yielded modest 
benefit; a study of daclizumab found the additional intervention to be detrimental.  Thus, the use 
of methylprednisolone or prednisone remains the standard first-line treatment for the initial 
treatment of aGVHD, but new treatment options that provide more durable responses and less 
immunosuppression-related toxicities are needed. 
1.3. 
Itacitinib Background 
Itacitinib adipate is a novel, potent, and selective inhibitor of the JAK family of protein TYKs 
with selectivity for JAK1.  Itacitinib is an investigational product that is proposed for 
development for treatment of myeloproliferative neoplasms, including myelofibrosis; 
inflammatory diseases, including rheumatoid arthritis and psoriasis; GVHD; solid tumors; and 
B-cell malignancies.  Janus kinases play an important role in signal transduction following 
cytokine and growth factor binding to their receptors.  Aberrant production of cytokines and 
growth factors has been associated with myeloproliferative neoplasms and a number of chronic 
inflammatory conditions, and JAK1 has been shown to cooperate with other JAKs to mediate the 
signaling of a number of inflammatory cytokines.  
 
1.3.1. 
Pharmacology 
Itacitinib potently inhibits JAK1 (IC50 = 3.6 nM at 1 mM adenosine triphosphate concentration), 
with 22- to > 500-fold selectivity over the other JAK family members, JAK2, JAK3, and TYK2.  
It does not significantly inhibit (< 30% inhibition) a broad panel of approximately 60 other 
kinases.  Itacitinib is also potent (IC50 values of approximately 10-350 nM) in cytokine-driven 
cell-based assays.  This effect is not due to general cytotoxicity.  Itacitinib also inhibits the 
growth of the cytokine-dependent cell line INA-6.  Itacitinib potently inhibits the 
phosphorylation of STAT proteins and the production of proinflammatory factors induced by 
other cytokines, such as IL-23 and IL-6 with IC50 values of approximately 30 nM to 100 nM.  In 
contrast, itacitinib shows less inhibition in cell-based assays dependent on JAK2 with IC50 values 
of approximately 1 μM or greater, suggesting that itacitinib is JAK2 sparing in cells.  In in vivo 
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models of JAK-dependent malignancy, itacitinib impedes subcutaneous tumor growth of INA-6 
cells expressing wild-type JAKs when administered by continuous infusion, achieving plasma 
concentrations well below those necessary to inhibit JAK2.  Oral itacitinib also reduced 
splenomegaly in a model of JAK2 V617F–driven neoplasia relevant to myelofibrosis. 
Additional details on pharmacology and toxicology may be found in the itacitinib IB and below 
in Section 1.4. 
1.3.2. 
Clinical Studies 
As of 13 DEC 2018, 11 clinical studies with itacitinib have been completed:  6 studies in healthy 
volunteers, 2 monotherapy proof-of-concept studies in subjects with active rheumatoid arthritis 
and stable chronic plaque psoriasis, and 3 combination studies (itacitinib + gemcitabine and 
nab-paclitaxel in subjects with advanced or metastatic solid tumors; itacitinib + docetaxel in 
subjects with previously treated Stage IIIB, Stage IV, or recurrent non–small cell lung cancer; 
and itacitinib + INCB040093 in subjects with relapsed or refractory Hodgkin lymphoma). 
As of the cutoff date, a total of 1138 subjects were enrolled in these studies and received at least 
1 dose of itacitinib.  In completed clinical pharmacology studies, itacitinib has been administered 
to 197 healthy adult subjects as a single dose, repeat single doses, or multiple doses for up to 
10 days. 
In the ongoing and completed clinical pharmacology studies, itacitinib was generally safe and 
well-tolerated in healthy subjects, with few discontinuations.  The majority of TEAEs were mild 
in severity.  Adverse events occurring frequently in subjects receiving itacitinib depended upon 
the subject's underlying disease and upon whether itacitinib was given alone or in combination 
with another therapy.  There are risks of reversible decreases in the levels of RBCs, WBCs, 
and/or platelets that may be more likely in subjects with certain underlying diseases, concurrent 
illnesses, or other medical treatments. 
All subjects in clinical studies will have these hematological parameters monitored, and doses of 
itacitinib will be interrupted or modified per Protocol until resolution if significant decreases in 
RBCs, WBCs, or platelets are observed.  
As a result of itacitinib-mediated immunomodulation, an increased incidence of infections could 
possibly occur with itacitinib monotherapy.  Strict clinical monitoring is indicated to identify and 
treat infections in study subjects should they occur. 
Additional details regarding the design and results of these studies are summarized in the 
itacitinib IB.  
1.4. 
Study Rationale 
Acute GVHD remains an important global health burden, with approximately 19,000 people of 
all ages, affected worldwide (Niederwieser et al 2016).  In children, aGVHD is also a major 
obstacle and remains a major cause of morbidity and mortality after alloSCT (Carpenter and 
Macmillan 2010).  Only about 30% to 50% of children respond to corticosteroids as initial 
therapy, and the optimal initial or second-line therapies have not yet been identified.   
Both adults and children have the same general disease etiology of aGVHD that involves 
initiation of a cytokine storm after prior damage to host tissue.  This damage could be due to 
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underlying disease or a conditioning regimen or the presence of donor immune cells in a foreign 
environment (Green and Hind 2016; Socié and Blazar 2009).  It has been shown both in children 
(Döring et al 2015) and adults (Zhang et al 2017; Malone et al 2007) that IL-6 and TNF-α are 
key cytokines that are elevated during aGVHD.  Interestingly, the concentration of TNF-α both 
before and after aGvHD onset looks similar between adults and children when comparing across 
studies (Döring et al 2015; Zhang et al 2017).  In other disease states, JAK inhibitors have been 
shown to reduce these inflammatory mediators either directly or indirectly.  For example, 
ruxolitinib, a JAK1/2 inhibitor, was shown to reduce both IL-6 and TNF-α in patients with 
myelofibrosis and the reduction was correlated with symptom scores (Verstovsek et al 2010).  
Additionally, tofacitinib, a JAK 1/3 inhibitor, reduced IL-6 in patients with RA (Migita et al 
2013).  Spoerl et al (2014) recently outlined several nonclinical studies and a small clinical 
proof-of-concept study demonstrating the pharmacologic basis and successful clinical 
application of JAK1/2 inhibition for GVHD.  Nonclinical models of GVHD mimic the elevated 
inflammatory cytokine and immune cell–mediated tissue damage that is common in both 
pediatric and adult populations.  In summary, cytokines involved in aGVHD disease etiology 
appear to be similar in children and adults; JAK inhibitors have been shown to reduce these 
cytokines; and based on a limited data set thus far, the exposure/response relationship appears to 
be generally similar in aGVHD for children and adults. 
The clinical study by Spoerl et al (2014) included 6 steroid-refractory GVHD adult subjects, all 
of whom responded after receiving ruxolitinib 5 to 10 mg BID.  In a second study by Zeiser et al 
(2015), the ORR was 81.5% in adult patients with steroid-refractory acute GVHD receiving 
ruxolitinib 5 to 10 mg BID as an add-on immunosuppressive therapy.  In comparison, a study by 
Khandelwal et al (2017) evaluated 11 pediatric subjects with steroid refractory acute GVHD for 
response, and the ORR when the same method of assessment was used was 86%.  Most of these 
pediatric subjects weighing greater than 25 kg started with 5 mg BID and were escalated to 
10 mg BID.  Although the authors of this study admit that dosing was empiric and optimization 
may be needed, there are similarities between course and dose between adult and pediatric 
patients. 
There is a need to develop safe agents for pediatric patients with aGVHD that demonstrate 
improved efficacy including durability and the potential for tapering steroids due to detrimental 
effects of corticosteroids, particularly over long-term use.  Since overall pathophysiology, 
clinical manifestation, patient management, treatment, and prognosis are comparable in both 
adult and pediatric populations (see Section 1.1), itacitinib is expected to act in the same way in 
adult and pediatric aGVHD population.  Thus, a comparable benefit without a significantly 
increased safety risk is expected in the pediatric population.  
1.4.1. 
Animal Studies in Acute Graft-Versus-Host Disease Models 
To determine the role of JAK/STAT signaling in GVHD, MHC-mismatched allo-HSCT was 
performed in mice [B6 (H-2b) to Balb/c(H-2d)].  In this model, IFN-γR signaling was shown to 
play a major role in T-cell trafficking to GVHD target organs via CXCR3.  Mice transplanted 
with IFN-γR -/- T cells had improved survival and less clinical GVHD compared with mice 
transplanted with wild-type T cells.  Furthermore, pharmacologic inhibition of interferon 
signaling with a JAK/STAT signaling inhibitor, ruxolitinib, for 20 days resulted in the decreased 
expression of CXCR3, reduced GVHD, and improved survival after allo-HSCT in mice 
(Figure 1; Choi et al 2012). 
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Figure 1: 
Effect of Ruxolitinib on Survival in Mice After Allo-HSCT 
 
BM = bone marrow; INCB = ruxolitinib (INCB018424); PBS = phosphate buffered saline. 
Source:   Choi et al 2012. 
This effect was shown to be mediated by altered trafficking of T cells to GVHD target organs.  
The pharmacologic blockade of JAK/STAT signaling in wild-type T-cells using the 
JAK/STAT-signaling inhibitor, ruxolitinib, resulted in a similar effect to IFN-γR-/- T cells both 
in vitro (reduction of CXCR3 expression in T cells) and in vivo (mitigation of GVHD after 
allo-HSCT).  Ruxolitinib also reduced GVHD and preserved the beneficial GVT effect in 
2 different mouse MHC-mismatched allo-HSCT models and 2 different mouse leukemia models 
(lymphoid leukemia and myeloid leukemia; Figure 2; Choi et al 2014).  This result was due to an 
alteration in T-cell trafficking without affecting T-cell expansion.  In addition, prolonged 
administration of ruxolitinib further improved survival after allo-HSCT.  These data suggest that 
pharmacologic inhibition of JAK/STAT signaling might be a promising therapeutic approach to 
achieve the beneficial antileukemia effect and overcome HLA barriers in allo-HSCT. 
Figure 2: 
Ruxolitinib Maintains a Beneficial Graft-Versus-Tumor Effect as 
Determined by Bioluminescence Imaging in the A20 Leukemia Model 
 
BM = bone marrow; INCB = ruxolitinib (INCB018424). 
Source:  Choi et al 2014. 
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In a separate study, in vivo JAK/STAT signaling inhibition improved survival of mice 
developing aGVHD and reduced histopathological GVHD grading, serum levels of 
proinflammatory cytokines, and expansion of alloreactive luc-transgenic T cells 
(Choi et al 2012). 
It was shown that the JAK1/2 inhibitor ruxolitinib impaired differentiation of CD4+ T cells into 
IFN-γ and IL-17A–producing cells and that both T-cell phenotypes are linked to GVHD.  
Additionally, ruxolitinib treatment in allo-HSCT recipients increased FoxP3+ Tregs, which are 
linked to immunologic tolerance. 
When tested in the same preclinical model of GVHD as described above for ruxolitinib, 
preliminary results with itacitinib showed similar pharmacologic inhibition of interferon 
signaling, resulting in the decreased expression of CXCR3, reduced GVHD, and improved 
survival after allo-HSCT in mice when dosed for 30 days (Figure 3).  
 
 
Figure 3: 
Effect of Itacitinib on Survival (Top Panel) and GVHD Score (Bottom Panel) 
in Mice After Allo-HSCT 
 
 
5% DMAC = vehicle control; TCD BM = T-cell–depleted bone marrow. 
Additional details can be found in the itacitinib IB. 
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1.4.2. 
Clinical Experience With Janus Kinase Inhibitors for the Treatment of 
Graft-Versus-Host Disease 
In adult population, clinical experience with ruxolitinib in subjects with SR GVHD was initially 
reported in 6 subjects based on a prospective protocol (Spoerl et al 2014).  Results were updated 
in a retrospective analysis of 95 subjects with SR aGVHD (n = 54, all Grade III or IV) or SR 
cGVHD (n = 41, all moderate or severe) who were treated with ruxolitinib at a dose of 5 to 
10 mg BID (Zeiser et al 2015).  Of the 54 subjects with aGVHD (all of whom with Grade III or 
IV disease), an ORR of 81.5% was reported, including 25 CRs (46.3%).  The median time to 
response was 1.5 weeks (range 1-11) after initiation of ruxolitinib therapy.  In addition, a 
6-month survival estimate of 79% (95% CI, 67.3%-90.7%) was reported, with a median 
follow-up time of 26.5 weeks.  GVHD relapses were reported in 6.8% (3/44) of subjects.  A 
significant decline in levels of IL-6 and soluble IL-2 receptor were observed in 12 of 
25 evaluable subjects treated at one center.  Cytomegalovirus reactivation was observed in 
33.3% (18/54) of aGVHD subjects and was controlled using antiviral therapy, while ruxolitinib 
treatment continued.  Cytopenias were also observed during treatment with ruxolitinib in 55.5% 
(30/54) of subjects; however, cytopenias were reported before treatment with ruxolitinib in 
51.7% (28/54).  Malignancy relapse was reported in 9.3% (5/54).  After additional follow-up 
(median follow-up of 19 and 24 months for subjects with aGVHD and cGVHD, respectively), 
1-year overall survival rates of 62.4% (CI:  49.4%-75.4%) and 92.7% (CI:  84.7%-100%) were 
reported for SR-aGVHD and SR-cGVHD, respectively.  The median duration of ruxolitinib 
treatment was 5 and 10 months for subjects with SR-aGVHD and SR-cGVHD, respectively 
reflecting the different biology of the diseases (Zeiser et al 2016). 
In a Phase 1 study that assessed the safety and tolerability of itacitinib in combination with 
corticosteroids (INCB 39110-108), 30 aGVHD adult subjects were randomized to 1 of 
2 treatment cohorts (200 mg cohort, n = 14; 300 mg cohort, n = 16).  This study involved both 
SR and SN subjects.  One subject was randomized to the 300 mg cohort but withdrew from the 
study before starting treatment.  One DLT of Grade 3 thrombocytopenia was reported in 
1 subject with pre-existing thrombocytopenia who was randomized to the 300 mg cohort.  The 
most frequently reported TEAEs (≥ 30% of participants) were consistent with expectations for 
patients with aGVHD and included thrombocytopenia/platelet count decreased, diarrhea, 
peripheral edema, abdominal pain, anemia, hypokalemia, hyperglycemia, and fatigue.  Nine 
participants (31.0%) had fatal TEAEs; fatal TEAEs reported for more than 1 participant included 
multiorgan failure (3 participants; 10.3%) and acute respiratory distress syndrome 
(2 participants; 6.9%).  Serious TEAEs were reported in 22 participants (75.9%).  The most 
frequently reported serious TEAE was sepsis (6 participants, 20.7%).  Other serious TEAEs 
reported in more than 1 participant included acute kidney injury, diarrhea, GI hemorrhage, and 
multiple organ dysfunction syndrome (3 participants each, 10.3%) and abdominal pain, 
staphylococcal infection, thrombocytopenia, acute respiratory distress syndrome, and respiratory 
failure (2 participants each, 6.9%).  Fifteen of the 29 participants (51.7%) discontinued treatment 
because of a TEAE.  The most frequently reported TEAE leading to permanent discontinuation 
of itacitinib was thrombocytopenia (4 participants, 13.8%).  The only other TEAEs leading to 
permanent discontinuation of itacitinib in more than 1 participant were neutrophil count 
decreased and sepsis (2 participants each, 6.9%).  The Day 28 ORR in first-line aGVHD 
participants was 83.3% for the 200 mg dose cohort and 66.7% for the 300 mg dose cohort; for 
participants with SR-aGVHD, the Day 28 ORR was 75% for the 200 mg cohort and 66.7% for 
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the 300 mg cohort.  Most responses occurred within the first 14 days of treatment, and responses 
were durable.  The median DOR was not reached in any of the dose cohorts; the median 
follow-up for DOR was 105 days (range:  29-827) for the 200 mg cohort and 185.5 days 
(range:  61-841) for the 300 mg cohort (IB).  Pharmacokinetics of itacitinib were evaluated using 
plasma samples collected predose and at 1 hour, 2 hours, and 4 to 8 hours postdose on Study 
Days 1 and 7.  Although intersubject variability was found to be high, PK exposure (Cmax and 
AUC) was consistent with historical data, and a large overlap in steady-state exposure was 
observed between the 200 mg and 300 mg cohorts.  The higher incidence of thrombocytopenia 
and DLT of thrombocytopenia in the 300 mg cohort, as well as similarities in PK and efficacy 
between dose groups, led to the identification of the 200 mg dose of itacitinib as the 
recommended phase 2 dose for future adult GVHD studies (Schroeder et al 2016).  The treatment 
compliance rate and median duration of treatment were also higher in the 200 mg cohort than the 
300 mg cohort.  Day 28 ORR in standard-risk and high-risk aGVHD were identical between dose 
cohorts.  All subjects with standard-risk aGVHD (MacMillan et al 2015) demonstrated response 
irrespective of treatment assignment, and 55.6% high-risk aGVHD subjects demonstrated 
response (200 mg dose cohort, n = 5, 55.6%;  300 mg cohort, n = 5, 55.6%; Incyte, data on file). 
New treatments for the therapy of aGVHD after allo-HSCT are urgently needed globally 
including both adult and pediatric patient populations.  Novel treatments with agents targeting 
the JAK-STAT pathway appear to decrease aGVHD while preserving GVT in murine models by 
targeting the IFN-γ pathway in activated T cells responsible for aGVHD.  The preclinical data 
with clinical proof-of-principle findings with ruxolitinib and itacitinib provide a strong rationale 
to further investigate itacitinib with corticosteroids in patients aGVHD. 
1.4.3. 
Rationale for Chosen Endpoints 
A continuous monitoring approach to assess the safety and tolerability of the treatment regimen 
will allow for rapid identification of emergent safety trends on an ongoing basis. 
A PK bridging approach was taken, because current knowledge suggests that due to similar 
disease etiology, the treatment effect of itacitinib in pediatric and adult patients will be similar if 
similar exposures are achieved.  Therefore, PK endpoints are included in this study as primary 
endpoints in Phase 1, as they will inform the Phase 2 dose and dosing in subsequent cohorts, and 
secondary endpoints in Phase 2 to further inform dosing by characterizing intrinsic and extrinsic 
factors of variability in pediatric patients. 
The lack of consistency and standardization in the conduct of GVHD clinical studies has been 
identified as a major obstacle to the progress of clinical studies and the development of new 
treatments.  Recent recommendations of the American Society for Blood and Marrow 
Transplantation recognize this observation and advocate for clinical studies with well-established 
endpoints and sample sizes sufficient enough to warrant meaningful statistical interpretation.  
Using response rate as an example, the timepoint to assess response to therapy should be 
standardized across studies, because response measurements made too early (eg, less than 
2 weeks) might not allow for sufficient time to observe therapeutic benefit, but response 
measurements made too late (> 6 weeks) may overlook potential benefit (Martin 2008).  
Consensus has emerged to use Day 28 as a standard response evaluation timepoint in 
SN-aGVHD treatment studies, because this endpoint has significant prognostic value with longer 
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term outcomes such as 6-month and 2-year NRM (MacMillan et al 2010, Saliba et al 2012, 
Levine et al 2010).   
1.4.4. 
Dose Rationale 
In adults with aGVHD who are SN, the starting dose is 200 mg QD.  This dose was selected 
based on data from a clinical study comparing 200 mg QD and 300 mg QD in patients with 
aGVHD.  Thirty aGVHD patients were randomized to 1 of 2 treatment cohorts (200 mg cohort, 
n = 14; 300 mg cohort, n = 16).  This study involved both SR and SN patients.  One subject was 
randomized to the 200 mg cohort but withdrew from the study before starting treatment.  The 
Day 28 ORR in treatment-naive aGVHD subjects in both treatment cohorts was 83.3%; Day 28 
ORR was 64.7% (200 mg cohort, 62.5%; 300 mg cohort, 66.7%).  Most responses occurred 
within the first 14 days of treatment, and responses were durable, with a median DOR of 
130 days and 136 days in the 200 mg cohort and 300 mg cohort, respectively. 
Pharmacokinetics of itacitinib were evaluated using plasma samples collected pre-dose and 
1 hour, 2 hours, and 4 to 8 hours postdose on Study Days 1 and 7.  Although intersubject 
variability was found to be high, PK exposure was consistent with historical data, and a large 
overlap in steady-state exposure was observed between the 200 mg and 300 mg cohorts.  These 
findings contributed to the identification of the 200 mg dose of itacitinib as the recommended 
phase 2 dose for future GVHD studies (Schroder et al 2016). 
One DLT of Grade 3 thrombocytopenia was reported in 1 subject with pre-existing 
thrombocytopenia who was randomized to the 300 mg cohort.  Adverse events reported in 
greater than 20% of all subjects included diarrhea, hypokalemia, peripheral edema, 
hyperglycemia, abdominal pain, hypophosphatemia, fatigue, headache, hypomagnesemia, and 
sepsis.  Thrombocytopenia and platelet count decreases were observed at a total of 20.7% and 
24.1% of subjects in both treatment groups, respectively, with a higher proportion of these events 
occurring in the 300 mg cohort, although a higher incidence of pre-existing thrombocytopenia 
was also observed in this group.  Thrombocytopenia was observed in 14.3% and 26.7% of the 
subjects in the 200 mg and the 300 mg cohorts, respectively.  Platelet count decreases were 
observed in 7.1% and 40.0% of the subjects in the 200 mg and the 300 mg cohorts, respectively.  
Adverse events were reflective of the patient population, and there were no safety issues that 
warranted further action or modification to the study design.  With the exception of 
thrombocytopenia/platelet count decreases, which were more often observed in the 300 mg 
itacitinib group, no significant differences were observed between the treatment arms with 
respect to the frequency or severity of AEs. 
The addition of itacitinib to corticosteroids did not exacerbate the safety profile of 
corticosteroids.  Moreover, the minimal inhibitory of JAK2 ( seen at pharmacologically relevant 
dose in both preclinical and clinical studies) may reduce the risk of cytopenia, which is a 
potential additional benefit for this patient population who recently underwent bone marrow 
transplant and many of whom will enter the study with compromised bone marrow function 
(55%). 
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To summarize, the following findings led to the selection of a 200 mg dose of itacitinib as the 
appropriate starting dose for future clinical studies in adult patients with aGVHD: 
• The higher incidence of thrombocytopenia in the 300 mg cohort. 
• The observation of 1 DLT of Grade 3 thrombocytopenia in the 300 mg cohort, and 
the absence of DLTs in the 200 mg cohort. 
• Similarities in Day 28 ORR between dose cohorts. 
• Similarities in PK between dose groups. 
• Similarities in Day 28 ORR in standard-risk and high-risk aGVHD between dose 
cohorts. 
In addition, similarities in the discontinuation of corticosteroid use between dose cohorts were 
observed as well as similar changes in clinical chemistry parameters relevant to the population 
under study between dose cohorts. 
The starting dose for each age cohort in children was based on allometric scaling, combined with 
an age-based maturation function in children younger than 2 years, to predict exposures after oral 
administration with various doses in pediatric patients with GVHD.  A PK bridging approach 
was used such that starting doses across the age range of 28 days to 18 years were identified that 
achieved exposures similar to those achieved in adult GVHD patients.  The following oral dosing 
regimens in pediatric patients are recommended:  200 mg QD in children from 12 years and 
older, 100 mg QD in children from 6 to < 12 years old, 50 mg QD in children from 2 to < 6 years 
old, 35 mg in children less than 2 weighing more than 8 kg, and 1.4 mg/kg in children weighing 
8 kg or less.  The median predicted exposure of these doses remains within the approximate 
interquartile range of the exposures achieved in adult patients with GVHD (Figure 4 and 
Figure 5).  Additionally, considering observed PK variability in adults and variability in body 
weights of children of a given age and gender, the predicted range of exposure in children is not 
expected to significantly exceed that observed in adults (Figure 4 and Figure 5).  Details 
regarding these dose projections are provided in a separate report (DMB-17.13.2)  These dose 
projections are based on several assumptions regarding variability, the magnitude of the impact 
of body weight and maturation, and assumed relative bioavailability of the absorption adjustment 
factors compared with the adult formulation (which was assumed to be 1).  The dose will be 
re-evaluated as data become available regarding the validity of these assumptions.  Details 
regarding dose evaluation based on emerging data from this study are presented in Section 9.6. 
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Figure 4: 
Simulated Median and 95% Prediction Interval of Exposures in Children 
Ages 2 to 5 Years Receiving 50 mg QD, 6 to 11 Years Receiving 100 mg QD, 
and 12 Years and Older Receiving 200 mg QD Compared With Adults With 
GVHD 
 
Clearance = 74.4 L/h, the clearance observed in adults with GVHD receiving 200 mg QD.  Variability equal to 
200 mg QD dosing in adult added (58% CV). 
Median = solid lines; 95% Prediction Interval = dashed lines; 50 mg QD = squares; 100 mg QD = triangles; 200 mg 
QD = diamonds. 
Boxplots:  data from both doses (200 mg and 300 mg; left) and 200 mg only (right). 
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Figure 5: 
Simulated Median and 95% Prediction Interval of Exposures in Children 
Weighing ≤ 8 kg Receiving 1.4 mg/kg or Children Weighing > 8 kg Receiving 
35 mg Compared With Adults With GVHD 
 
Clearance = 74.4 L/h, the clearance observed in adults with GVHD receiving 200 mg QD.  Variability equal to 
200 mg QD dosing in adult added (58% CV). 
Median = solid lines; 95% Prediction Interval = dashed lines; 1.4 mg/kg QD = circles; 35 mg QD = squares. 
Boxplots:  data from both doses (200 mg and 300 mg; left) and 200 mg only (right) from Study INCB 39110-108. 
Small N at 17 kg results in convergence of the 95% PI to the median value. 
1.5. 
Potential Risks and Benefits of the Treatment Regimen 
Adverse events that have been most frequently reported in at least 10% of adult subjects 
receiving itacitinib monotherapy include anemia, thrombocytopenia, diarrhea, nausea, fatigue, 
and upper respiratory tract infection. 
As a result of itacitinib-mediated immunomodulation, an increased incidence of infections could 
possibly occur with itacitinib therapy.  Strict medical monitoring is indicated to identify and treat 
infections in study subjects should they occur. 
Because of the potential for myelosuppression, subjects will have hematologic parameters 
closely monitored during clinical studies.  If there are clinically relevant declines in hematology 
parameters, therapy may be interrupted until resolution or discontinuation.  As itacitinib also has 
the potential to cause WBC margination (ie, a transient decrease in ANC), assessment of 
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hematology parameters should be performed before study drug administration and at all 
applicable study visits. 
As described previously, murine models of JAK/STAT inhibition using both ruxolitinib and 
itacitinib have demonstrated a decrease in the expression of CXCR3, reduction of GVHD, 
preservation of the beneficial GVT effect, and improvement in survival.  To the extent that the 
thrombocytopenia and anemia observed with ruxolitinib reflects the inhibition of JAK2-mediated 
erythropoiesis and thrombopoiesis, a selective JAK1 inhibitor would likely be associated with a 
lower incidence of thrombocytopenia and anemia, while still resulting in a significant reduction 
in the production and the signaling of inflammatory and immune cytokines.  It is therefore of 
interest to evaluate a selective JAK1 inhibitor in this setting given the hematologic complications 
associated with aGVHD. 
In a Phase 1 study in aGVHD subjects (INCB 39110-108), treatment interruptions and stepwise 
100 mg dose reductions were used to manage toxicity.  In an analysis of the data, efficacy was 
not affected in subjects who demonstrated Day 28 response and had a dose reduction for any 
reason.  Dose reductions also facilitated platelet recovery in subjects with platelet count 
decreases receiving treatment, although recovery was also observed in subjects who did not have 
a dose reduction.  Thus, the proposed itacitinib tapering schedule is not expected to negatively 
affect efficacy in responding subjects, and clinicians are permitted to re-escalate the dose of 
itacitinib in subjects who initiate a taper but subsequently begin to demonstrate signs or 
symptoms of GVHD progression. 
Observed data from Study INCB 39110-108 demonstrated that there is an approximate 2-fold 
increase in exposure when itacitinib is coadministered with posaconzole.  Given the risk/benefit 
profile observed in Study INCB 39110-108, no dose adjustment is recommended with 
coadministration of posaconazole.  In a healthy volunteer study, coadministration of itacitinib 
200 mg with itraconazole 200 mg QD resulted in a nearly 5-fold increase in exposure of 
itacitinib.  Posaconazole is a less potent CYP3A4 inhibitor than itraconazole based on fold 
increase in midazolam exposure with coadministration, 6.23 compared with 10.8 (University of 
Washington School of Pharmacy 2002), which could explain the difference in exposure change 
between coadministration of itacitinib with posaconazole or itraconazole.  However, taking into 
consideration the result of the healthy volunteer drug interaction study with itraconazole and 
given the lack of information regarding the risk/benefit profile in patients receiving strong 
CYP3A4 inhibitors more potent than posaconazole, subjects taking the following potent 
CYP3A4 inhibitors should have a dose reduction of itacitinib to half of the initial dose (eg, from 
200 mg to 100 mg QD):  itraconazole, voriconazole, mibefradil, and clarithromycin.  No dose 
adjustment is recommended for concomitant administration of other CYP3A4 inhibitors. 
Because overall pathophysiology, clinical manifestation, patient management, treatment and 
prognosis are comparable in both adult and pediatric populations (see Sections 1.1 and 1.4), 
itacitinib is expected to act in the same way in adult and pediatric aGVHD population.  Thus, a 
comparable benefit without a significantly increased safety risk is expected in the pediatric 
population. 
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2. 
STUDY OBJECTIVES AND ENDPOINTS 
Study objectives and endpoints are shown in Table 1. 
Table 1: 
Study Objectives and Endpoints 
Objectives 
Endpoints 
Phase 1 (Safety run-in for first 10 subjects in each cohort) 
Primary 
To assess the safety and tolerability of itacitinib in 
combination with corticosteroids in pediatric 
subjects with Grade II to IV SN-aGVHD. 
• Frequency, duration, and severity of AEs and SAEs 
• Changes in vital signs and clinical evaluations. 
• Changes in clinical laboratory blood samples. 
To evaluate the PK of itacitinib when administered 
in combination with corticosteroids. 
• Cmax, Cmin, Tmax, AUC, and Cl/F assessed at Day 1, 7, and 
28. 
Secondary 
To assess the efficacy of itacitinib in combination 
with corticosteroids in terms of ORR at Day 28 in 
pediatric subjects with aGVHD. 
• ORR at Day 28, defined as the proportion of subjects 
demonstrating a CR, VGPR, or PR. 
Phase 2 (Final analyses to combine all subjects within a cohort) 
Primary 
To assess the efficacy of itacitinib in combination 
with corticosteroids in terms of ORR at Day 28 in 
pediatric subjects with aGVHD. 
• ORR at Day 28, defined as the proportion of subjects 
demonstrating a CR, VGPR, or PR. 
Secondary 
To evaluate the PK of itacitinib when administered 
in combination with corticosteroids. 
• Cmax, Cmin, Tmax, AUC, and Cl/F assessed at Day 7. 
To evaluate additional efficacy and longer-term 
efficacy outcomes. 
• ORR, defined as the proportion of subjects 
demonstrating a CR, VGPR, or PR, at Days 14, 56, and 
100. 
• NRM rate, defined as the proportion of subjects who died 
due to causes other than underlying hematological 
disorders relapse at Months 6, 9, 12, and 24. 
• DOR for responders will be calculated.  The DOR is 
defined from the time of the onset of response to either 
progression or death. 
• Time to response, defined as the interval from treatment 
initiation to first response. 
• Relapse rate of malignant and nonmalignant disorders, 
defined as the proportion of subjects whose underlying 
disease relapses. 
• Malignant and nonmalignant disorders relapse–related 
mortality rate, defined as the proportion of subjects 
whose underlying disease relapses and has a fatal 
outcome. 
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Table 1: 
Study Objectives and Endpoints (Continued) 
Objectives 
Endpoints 
Secondary (Continued)  
To evaluate additional efficacy and longer-term 
efficacy outcomes. (Continued) 
• FFS rate at a timepoint, defined as the proportion of 
subjects who are still alive, have not relapsed, have not 
required additional therapy for aGVHD, and have not 
demonstrated signs or symptoms of cGVHD. 
• Overall survival, defined as the interval from treatment 
initiation to death due to any cause. 
To assess the incidence and severity of AEs and 
SAEs. 
• Clinical safety data (eg, AEs, infections) will be 
tabulated and listed. 
To evaluate the incidence of secondary graft 
failure. 
• Incidence rate of secondary graft failure, defined as 
> 95% recipient cells any time after engraftment with no 
signs of relapse OR retransplantation because of 
secondary neutropenia (< 0.5 × 109/L) and/or 
thrombocytopenia (< 20 × 109/L) within 2 months of 
transplant. 
To evaluate the use and discontinuation of 
corticosteroids. 
• Average and cumulative corticosteroid dose at Days 28, 
56, 100, and 180; proportion of subjects who discontinue 
corticosteroids at Days 56 and 100. 
To evaluate the use and discontinuation of 
immunosuppressive medications. 
• Proportion of subjects who discontinue 
immunosuppressive medication at Days 56 and 100. 
To evaluate the incidence of aGVHD flares. 
• Incidence rate of aGVHD flares through Day 100. 
To evaluate the incidence of cGVHD. 
• Incidence rate of cGVHD at Days 180 and 365. 
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3. 
SUBJECT ELIGIBILITY 
Deviations from eligibility criteria are not allowed because they can potentially jeopardize the 
scientific integrity of the study, regulatory acceptability, and/or subject safety.  Therefore, 
adherence to the criteria as specified in the Protocol is essential. 
3.1. 
Subject Inclusion Criteria 
A subject who meets all of the following criteria may be included in the study: 
1. Male and female subjects: 
a. 12 to < 18 years old (Cohort 1) 
b. 6 to < 12 years old (Cohort 2) 
c. 2 to < 6 years old (Cohort 3) 
d. Weighing > 8 kg to < 2 years old (Cohort 4) 
e. 28 days old to weighing ≤ 8 kg (Cohort 5) 
2. Undergone 1 allo-HSCT from any donor HLA type (related or unrelated donor with any 
degree of HLA matching) using any graft source (bone marrow, peripheral blood stem 
cells, or cord blood).  Recipients of myeloablative and reduced-intensity conditioning 
regimens are eligible. 
3. Clinically suspected Grade II to IV aGVHD as per MAGIC criteria, occurring after 
allo-HSCT and any GVHD prophylactic medication.  Efforts should be made to obtain 
biopsies to pathologically confirm aGVHD.  In cases where a biopsy is negative, unable 
to be obtained, or clinically contraindicated, clinical suspicion of aGVHD by the treating 
physician is sufficient, provided that alternative diagnoses of drug effects or infection are 
adequately ruled out. 
4. Evidence of myeloid engraftment (eg, ANC ≥ 0.5 × 109/L for 3 consecutive assessments 
if ablative therapy was previously used).  Use of growth factor supplementation is 
allowed. 
5. GFR > 50 mL/min/1.73 m2 as estimated using modified Schwartz formula (Schwartz et al 
2009; Appendix D). 
6. May be applicable to Cohort 1:  be willing to avoid pregnancy or fathering children based 
on 1 of the following criteria: 
a. Females of nonchildbearing potential (ie, surgically sterile with a hysterectomy 
and/or bilateral oophorectomy OR ≥ 12 months of primary amenorrhea). 
b. Females of childbearing potential who have a negative serum pregnancy test at 
screening and who agrees to take appropriate precautions to avoid pregnancy (with at 
least 99% certainty) from screening through safety follow-up.  Permitted methods that 
are at least 99% effective in preventing pregnancy (see Appendix C) should be 
communicated to the subject and her understanding confirmed. 
c. Males of fathering potential who agree to take appropriate precautions to avoid 
fathering children (with at least 99% certainty) from screening through safety 
follow-up.  A male is considered fertile after puberty unless permanently sterile by 
bilateral orchiectomy.  Permitted methods that are at least 99% effective in preventing 
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pregnancy (see Appendix C) should be communicated to the subject and their 
understanding confirmed. 
7. Subject (parent or legal guardian) is able to give written informed consent and assent (as 
appropriate) according to institutional standards and to comply with all study visits and 
procedures. 
8. Able to swallow and retain oral medication. 
3.2. 
Subject Exclusion Criteria 
A subject who meets any of the following criteria will be excluded from the study: 
1. More than 1 allo-HSCT. 
2. Received more than 2 days of systemic corticosteroids for aGVHD before the first study 
drug administration. 
3. Presence of GVHD overlap syndrome. 
4. Presence of an active uncontrolled infection, defined as hemodynamic instability 
attributable to sepsis or new symptoms, worsening physical signs, or radiographic 
findings attributable to infection.  Persisting fever without signs or symptoms will not be 
interpreted as an active uncontrolled infection. 
5. Known HIV infection. 
6. Active hepatitis B virus (HBV) or hepatitis C virus (HCV) infection that requires 
treatment or at risk for HBV reactivation (ie, positive hepatitis B surface antigen 
[HBsAg] and/or positive total hepatitis B core antibody).  Prior test results obtained as 
part of standard of care before allo-HSCT confirming that a subject is immune and not at 
risk for reactivation may be used for purposes of eligibility, and tests do not need to be 
repeated. 
7. Subjects with evidence of relapsed primary disease, or subjects who have been treated for 
relapse after the allo-HSCT was performed. 
8. Any corticosteroid therapy for indications other than GVHD at doses > 1 mg/kg per day 
of methylprednisolone (or equivalent) within 7 days of the first study drug 
administration. 
9. Severe organ dysfunction unrelated to underlying GVHD, including the following: 
a. Abnormal liver function, defined as total bilirubin > 1.5 × ULN (unless elevated 
bilirubin is attributed to Gilbert’s syndrome) and/or ALT/AST > 2.5 × ULN. 
b. Clinically significant or uncontrolled cardiovascular disease, including unstable 
angina, acute myocardial infarction within 6 months from Study Day 1, New York 
Heart Association Class III or IV congestive heart failure, circulatory collapse 
requiring vasopressor or inotropic support, or arrhythmia that requires therapy. 
c. Clinically significant respiratory disease that requires mechanical ventilation support 
or ≥ 50% oxygen.  
10. May be applicable for Cohort 1:  currently breast feeding. 
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11. Receipt of live (including attenuated) vaccines or anticipation of need for such vaccines 
during the study. 
12. Receipt of JAK inhibitor therapy after allo-HSCT for any indication.  Treatment with a 
JAK inhibitor before allo-HSCT is permitted. 
13. Treatment with any other investigational agent, device, or procedure within 21 days (or 
5 half-lives, whichever is greater) of enrollment.  Subjects participating in a GVHD 
prophylaxis study or conditioning regimen should be discussed with the sponsor's 
medical monitor before enrollment. 
14. Any medical complications or conditions that would, in the investigator's judgment, 
interfere with full participation in the study, including administration of study treatment 
and attending required study visits; pose a significant risk to the subject; or interfere with 
interpretation of study data. 
15. Known allergies, hypersensitivity, or intolerance to any of the study medications, 
excipients, or similar compounds. 
3.3. 
Lifestyle Considerations 
3.3.1. 
Meals and Dietary Restrictions  
Subjects should be instructed to refrain from the consumption of pomegranates or pomegranate juice 
and grapefruit or grapefruit juice, as these are known to inhibit cytochrome CYP3A enzymes and 
may increase the exposure to itacitinib. 
3.3.2. 
Activity  
No restrictions are required. 
4. 
INVESTIGATIONAL PLAN 
4.1. 
Overall Study Design 
This is an open-label, single-arm, multicenter, Phase 1/2 study of itacitinib in combination with 
corticosteroids for the treatment of Grades II to IV aGVHD in SN pediatric subjects aged from 
28 days to < 18 years old. 
This study consists of 2 phases:  Phase 1 (safety run-in) and Phase 2 (expansion).  It will 
be conducted in a staggered approach in the following 5 groups:  12 to < 18 years old (Cohort 1), 
6 to < 12 years old (Cohort 2), 2 to < 6 years old (Cohort 3), weighing > 8 kg to < 2 years old 
(Cohort 4), and 28 days old to weighing ≤ 8 kg (Cohort 5). 
Within each cohort, among the first 10 subjects enrolled in Phase 1 and evaluable for DLT, if 
there are more than 3 subjects with any DLT events occurring in the 28-day surveillance period, 
the study will be terminated.  A cohort can be expanded and proceed to subsequent steps if 3 or 
fewer out of 10 subjects in the cohort have a DLT occurring in the 28-day surveillance period 
(see Table 2). 
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Table 2: 
Overall Study Flow 
Cohort 
Subjects in 
Phase 1 
Age 
Subjects 
With DLT 
Action Taken 
Additional Subjects 
in Phase 2 
1 
10 
12 to < 18 years 
old 
≤ 3 
Expand to Phase 2 
Proceed to Cohorts 2 and 3 
20 
> 3 
Terminate the study 
– 
2 
10 
6 to < 12 years old 
≤ 3 
Expand to Phase 2 
Proceed to Cohort 4 (provided 
Cohort 3 is also completed) 
20 
> 3 
Terminate the study 
– 
3 
10 
2 to < 6 years old 
≤ 3 
Expand to Phase 2 
Proceed to Cohort 4 (provided 
Cohort 2 is also completed) 
20 
> 3 
Terminate the study 
– 
4 
10 
Weighing > 8 kg 
to < 2 years 
≤ 3 
Expand to Phase 2 
Proceed to Cohort 5 
20 
>3 
Terminate the study 
– 
5 
10 
28 days old to 
weighing ≤ 8 kg 
≤ 3 
Expand to Phase 2 
20 
> 3 
Terminate the study 
– 
4.1.1. 
Phase 1 
Phase 1 is a safety run-in in which 10 evaluable subjects will be assessed in each cohort for 
safety, tolerability, and PK of itacitinib in combination with corticosteroids (including AEs, 
SAEs, and clinical/laboratory assessments) using a continuous monitoring and staggered 
approach (Cohort 1 will be evaluated first, and Cohort 5 will be evaluated last).  In order to be 
included in the tolerability review, subjects must have received study treatment for at least 75% 
of the days (ie, 21 days) during the 28-day surveillance period or have experienced a DLT.  
Additional subjects may be enrolled to achieve a minimum cohort size of 10 subjects, should 
dropouts or dose interruptions/reductions result in a subject being nonevaluable. 
 
In case of toxicity, dose modifications at any timepoint will be allowed.  Dose modifications 
within a study cohort and for subsequent age-specific cohorts will be based on safety data and 
might also be based on PK data. 
Cohort 1 will be evaluated first.  Enrollment in Cohorts 2 and 3 will begin once the first 
age-appropriate formulation is available and once safety, tolerability, and PK data are obtained 
for Cohort 1, and that dose level is deemed safe and tolerated.  Enrollment in Cohort 4 will start 
once the same is completed for Cohorts 2 and 3 regarding safety, tolerability, and PK.  To start 
enrollment in Cohort 5, the same needs to be completed for Cohort 4, and, additionally, the 
second age-appropriate formulation (eg, sustained-release liquid formulation) needs to be 
available. 
Study team will perform a review of safety and tolerability on a continual basis.  Additionally, 
regular safety calls with the investigators will be established during Part 1 of each cohort.  
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An independent DMC will perform a review of safety, tolerability, and PK data. 
4.1.2. 
Phase 2 
Phase 2 will be expanded to a total of approximately 30 subjects for each cohort; it will include 
subjects who were treated in Phase 1 at the dose level that was deemed safe and tolerated and 
was supported by PK. 
Subjects in Phase 2 will be evaluated for efficacy and safety.  Pharmacokinetic data will also be 
collected in Phase 2. 
Subjects will receive study treatment until treatment failure (including progression of disease and 
lack of response), unacceptable toxicity, completion of taper, or death.  Transfusion support and 
continued use of anti-infective medications, GVHD prophylaxis medications (including 
calcineurin inhibitors), and topical steroid therapies are permitted. 
GVHD staging and grading will be assessed as per MAGIC criteria; safety and tolerability will 
be assessed as per NCI CTCAE v4.03. 
In case of toxicity, dose modifications at any timepoint will be allowed.   
4.2. 
Measures Taken to Avoid Bias 
Acute GVHD response and AEs will be assessed using standardized objective criteria (CIBMTR 
severity index for grading GVHD and determining response [Appendix A] and NCI 
CTCAE v4.03 [2009], respectively).  All subject response data will be collected throughout the 
study, which will allow for all the data to be reanalyzed in case the grading scores system 
changes. 
An independent DMC will be established with the main purpose of reviewing results from 
prespecified scheduled safety, tolerability, and PK analyses and for recommending a dose for 
subsequent clinical evaluation as appropriate.  All safety information, including the AE data 
from the replaced subjects, will be reviewed during this review process. 
Details are included in the independent DMC charter. 
4.3. 
Number of Subjects 
4.3.1. 
Planned Number of Subjects 
Approximately 30 pediatric subjects are planned for enrollment into each of 5 cohorts in this 
study (total approximately 150).  However, this may vary due to the number of subjects needed 
to determine the tolerated and targeted dose.  Moreover, due to low incidence in youngest cohort 
populations, particularly Cohort 4 and 5, this number might not be reached. 
An independent DMC will perform the full review of safety, tolerability, and PK data after 
10 subjects treated with itacitinib in combination with corticosteroids have completed 28 days on 
study in each cohort.  If the initial dose needs to be changed based on the safety or PK data after 
the DMC data review, then approximately additional 10 subjects will need to enrolled at the new 
dose level of itacitinib in that cohort. 
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4.3.2. 
Replacement of Subjects 
In order to be included in the tolerability review, subjects must have received itacitinib for at 
least 75% of the days (ie, 21 days) of a cohort-specific dose during the 28-day surveillance 
period or have experienced a DLT.  Should discontinuation/withdrawal dose or 
interruptions/reductions result in a subject being nonevaluable, additional subjects may be 
enrolled to achieve a minimum cohort size of approximately 10 to 20 subjects.  However, all 
safety information, including the AE data from the replaced subjects, will be reviewed during the 
dose tolerability review process.  Treatment PK, efficacy
 
 will also be assessed. 
4.4. 
Duration of Treatment and Subject Participation 
After signing the ICF, screening assessments will be completed over a period of up to 28 days.  
Subjects will receive study treatment in continuous 28-day cycles; this may include temporary 
treatment interruptions described in Section 5.6.3.  Each subject enrolled in the study may 
continue to receive study treatment as long as benefit is being observed and/or treatment 
withdrawal criteria are not met.  If the subject permanently discontinues study treatment (see 
Section 5.6.5 for details), the treatment period will end, and the subject will enter the follow-up 
period.  The safety follow-up visit will occur 30 to 35 days after the last dose or EOT visit 
(whichever is later), and the post-treatment GVHD and survival follow-up periods will last until 
death or study withdrawal.  Study participation is expected to average approximately 12 months 
per individual subject but may vary based on clinical outcomes.  
4.5. 
Overall Study Duration 
The study begins when the first subject signs the informed consent.  Subjects who are still on 
study at the time of the primary endpoint analysis will continue to receive study treatment until 
treatment withdrawal criteria are met (Section 5.7).  All subjects will be followed for survival 
until death, withdrawal of consent, or the end of the study, whichever occurs first.  The study 
will end once 75% of subjects have died or are lost to follow-up.  Provisions will be made to 
ensure access to treatment for subjects who are continuing to benefit from study treatment at the 
time of study completion. 
4.6. 
Study Termination 
The investigator retains the right to terminate study participation at any time, according to the 
terms specified in the study contract.  The head of the study site is to notify the IRB/IEC in 
writing of the study's completion or early termination, send a copy of the notification to the 
sponsor or sponsor's designee, and retain 1 copy for the site study regulatory file. 
The sponsor may terminate the study electively, if required by regulatory decision, or upon 
advice of the independent DMC.  If the study is terminated prematurely, the sponsor will notify 
the head of the study site and the regulatory bodies of the decision and reason for termination of 
the study.  The head of the study site will notify the investigators and the IRBs and IECs of the 
decision and reason for termination of the study.  The DMC will recommend termination of the 
study if warranted, as described in Section 8.7. 
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5. 
TREATMENT 
5.1. 
Study Drug and Treatment Assignment 
5.1.1. 
Subject Numbering and Treatment Assignment 
Each subject will be identified in the study by a subject ID number, which is a combination of 
the site ID and subject number.  Site staff should contact the IRT to obtain the subject ID number 
during screening. 
Site staff will contact the IRT to obtain the initial study drug assignment.  The investigator or 
designee will select the assigned bottles of study drug from their stock that correspond to the 
number provided by the IRT, record the bottle numbers in the eCRF, and dispense the study drug 
to the subject.  All subsequent dispensing of study drug should follow this process.  Full details 
will be provided in the IRT manual. 
All subject numbers will be 6 digits; the first 3 digits will be the site number and the last 3 digits 
will be the subject's number.  This subject number will be maintained throughout the study and 
will not be reassigned.  Subjects who withdraw consent or discontinue from the study after being 
assigned a subject number will retain their initial number. 
If a subject is mistakenly given a bottle of study drug that is not the bottle assigned by the IRT, 
then the IRT help desk must be notified immediately.  The reason for the misallocation of the 
study drug must be documented by the study site. 
For subjects who signed an ICF but are not allocated and for subjects who are allocated but were 
not treated, refer to the eCRF Completion Guidelines for instruction on which eCRFs to 
complete. 
5.1.2. 
Randomization and Blinding 
Not applicable. 
5.2. 
Study Drug 
The following describes the study drug used in this study.  Additional details of handling, 
packaging, and labeling of the study drug will be defined in a separate Manual of Procedures. 
5.2.1. 
Description and Administration 
Itacitinib 100 mg (free base equivalent) sustained-release tablets are oval-shaped and purple and 
are debossed with "INCY" on one side and "100" on the other side.  Tablets contain the active 
ingredient, hypromellose, microcrystalline cellulose, lactose monohydrate, and magnesium 
stearate and are coated with a nonfunctional film coating. 
Itacitinib 25 mg (free base equivalent) sustained-release tablets are uncoated round tablets with 
no debossing.  Tablets contain the active ingredient, hypromellose, microcrystalline cellulose, 
lactose monohydrate, and magnesium stearate.  
Two additional age-appropriate formulations are being developed that could be used for 
Cohorts 2, 3, 4, and/or 5. 
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The currently recommended doses are outlined as follows.  They are based on simulation and 
include assumptions regarding the relationship between age/weight and clearance and relative 
bioavailability of the yet-to-be-developed age-appropriate formulations.  As data become 
available regarding these assumptions, dosing recommendations may change. 
• 12 to < 18 years old (Cohort 1):  Subjects will receive oral itacitinib at a dose level of 
200 mg QD (2 × 100 mg tablets). 
• 6 to < 12 years old (Cohort 2):  Subjects will receive oral itacitinib at a dose level of 
100 mg QD (1 × 100 mg tablet or first age-appropriate formulation). 
• 2 to < 6 years old (Cohort3):  Subjects will receive oral itacitinib at a dose level of 
50 mg QD (first age-appropriate formulation) or 2 × 25 mg tablets.  
• Weighing > 8 kg to < 2 years old (Cohort 4):  Subjects will receive oral itacitinib at a 
dose level of 35 mg QD (first age-appropriate formulation). 
• 28 days old to weighing ≤ 8 kg (Cohort 5):  Subjects will receive oral itacitinib at a 
dose level of 1.4 mg/kg QD (second age-appropriate formulation). 
Subjects may have dose reductions or modifications of itacitinib during the course of treatment 
based on AEs, clinical evaluation, and laboratory assessments.  See Section 5.6 for dose 
modifications of study drug. 
Subjects are permitted to remain on itacitinib treatment until withdrawal from study treatment is 
considered necessary as per Section 5.7. 
In case the PK/PD analyses described in Section 9.6 recommend a dose increase/decrease for the 
study cohort and subsequent age-specific cohorts, the changes will be implemented only after 
approval of a substantial amendment by the Competent Authorities. 
5.2.2. 
Supply, Packaging, and Labeling 
Itacitinib tablets and capsules will be provided to sites in high-density polyethylene bottles as 
applicable by Incyte.  No preparation is required. 
All Incyte investigational product labels will be in the local language and will comply with the 
legal requirements of each country and will state for clinical use only. 
5.2.3. 
Storage 
Itacitinib should be stored at ambient conditions (15°C to 30°C, or 59°F to 86°F) as per the 
itacitinib IB. 
5.2.4. 
Instruction to Subjects for Handling Itacitinib 
The subject (parent or legal guardian) must be instructed in the handling of itacitinib as follows: 
• To store the bottles at room temperature, in a safe place and out of the reach of 
children. 
• To only remove the number of tablets or capsules needed at the time of 
administration. 
• Not to remove tablets or capsules in advance of the next scheduled administration. 
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• To make every effort to take doses on schedule. 
• To report any missed doses. 
• To take tablets or capsules with a glass of water. 
• Not to take another dose if vomiting occurs after taking study medication. 
• To refrain from taking study medication on the day of clinic visits until after blood 
samples are collected. 
• To fast on PK assessment days (Days 1, 7, and 28 in Phase 1 and Day 7 in Phase 2) 
before dose administration.  Subjects should not consume food 2 hours before dosing 
until 1 hour after dosing. 
• To bring all used and unused bottles of study medication to the site at each visit. 
5.3. 
Background Treatment (Corticosteroids) 
Either oral prednisone or intravenous methylprednisolone may be used to begin corticosteroid 
treatment at the investigator's discretion. 
5.3.1. 
Prednisone 
5.3.1.1. 
Description    
Prednisone is a white to off-white, odorless, crystalline powder.  Tablets are typically white in 
color and contain lactose monohydrate, magnesium stearate, microcrystalline cellulose, 
pregelatinized starch, and sodium starch glycolate.  Commonly available dose strengths include 
1, 2.5, 5, 10, 20, and 50 mg tablets. 
5.3.1.2. 
Supply, Packaging, and Labeling    
Investigators are responsible for ensuring that subjects receive commercially available supplies 
of prednisone for the duration of the study treatment period.  Incyte may provide prednisone 
where required by applicable law or regulation. 
5.3.1.3. 
Storage 
Prednisone tablets should be stored in accordance with local prescribing information 
requirements. 
5.3.2. 
Methylprednisolone 
5.3.2.1. 
Description 
Methylprednisolone sterile powder is an anti-inflammatory glucocorticoid, which contains 
methylprednisolone sodium succinate as the active ingredient.  Methylprednisolone sodium 
succinate, USP, is the sodium succinate ester of methylprednisolone, and it occurs as a white, or 
nearly white, odorless hygroscopic, amorphous solid.  It is very soluble in water and in alcohol; 
it is insoluble in chloroform and is very slightly soluble in acetone.  
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5.3.2.2. 
Supply, Packaging, and Labeling 
Investigators are responsible for ensuring that subjects receive commercially available supplies 
of methylprednisolone for the duration of the study treatment period.  Incyte may provide 
methylprednisolone where required by applicable law or regulation. 
5.3.2.3. 
Storage 
Methylprednisolone (unreconstituted product or solution) should be stored in accordance with 
local prescribing information. 
5.3.3. 
Starting Dose and Administration of Corticosteroids  
All subjects will receive methylprednisolone 2 mg/kg IV daily (or prednisone equivalent) or at a 
dose that is appropriate for the severity of disease as outlined per local treatment guidelines 
(Martin et al 2012, Ruutu et al 2014) as background treatment.  Subjects who previously began 
corticosteroid therapy at a different dose may remain on that dose if considered clinically 
appropriate by the treating physician.  Corticosteroids should be tapered as tolerated per 
institutional guidelines at a rate that is commensurate with resolution of GVHD manifestations. 
If GVHD flares during the taper of prednisone or methylprednisolone, the dose may be 
re-escalated at the investigator's discretion and will not be considered treatment failure, as long 
as the dose does not exceed the initial starting dose.  If the dose required exceeds this threshold, 
or if the flare is not responsive to increased corticosteroids or multiple flares are observed, then 
the subject will be considered to have experienced treatment failure and be withdrawn from 
study treatment. 
5.4. 
Prophylactic and Supportive Care Medications 
Patients who undergo allo-HSCT are at risk for a variety of infections based on the degree of 
immunosuppression induced by the conditioning regimen before transplant.  As such, it is 
considered routine practice to use antibiotics, anti-infectives, and immunizations as prophylactic 
therapies (Tomblyn et al 2009).  In cases where post-transplant anti-infective prophylaxis 
measures are necessary, ongoing therapy may continue at the investigator's discretion per 
institutional guidelines. 
Systemic and topical GVHD prophylaxis medications (eg, cyclosporine, methotrexate, 
tacrolimus) may be continued at therapeutic doses as appropriate based on stage and sites of 
disease. 
Additional supportive care measures (eg, use of antimotility agents for diarrhea management, 
beclomethasone, ursodiol) are permitted at the investigator's discretion. 
See Section 5.7.4 for additional details.  
5.5. 
Treatment Compliance 
Treatment compliance with all study-related medications should be emphasized to the subject 
(parents or legal guardians) by the site personnel, and appropriate steps should be taken to 
optimize compliance during the study.  Itacitinib compliance will be calculated, by the sponsor, 
based on the drug accountability documented by the site staff and monitored by the 
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sponsor/designee (tablet counts).  Subjects (parents or legal guardians) will be instructed to bring 
all study-related medications with them to each study visit in order for site personnel to conduct 
tablet counts to assess study drug accountability.  The drug accountability documentation will be 
used by the sponsor to calculate treatment compliance. 
Although commercial supplies of corticosteroids will be used, dose changes and interruptions 
will also be documented in the medical record and monitored by the sponsor or its designee.  As 
corticosteroid dose strengths and administration types will vary, compliance with corticosteroids 
will not be calculated. 
5.6. 
Treatment Interruptions and Adjustments 
5.6.1. 
Dose Modifications 
Potential dose modifications might be based on both safety and PK data.  If the initial itacitinib is 
not deemed safe and tolerated at each dose level, then a lower dose will be explored (ie, ~50% 
dose reduction).  In case of toxicity, dose modifications at any timepoint will be allowed.  Dose 
modifications might also be based on PK data.  Dose interruptions and modifications may occur 
for individual study subjects based on the emergence or resolution of toxicity. 
5.6.2. 
Dose-Limiting Toxicity 
A DLT will be defined as the occurrence of any of the toxicities meeting criteria for DLT as 
defined below, occurring up to and including Day 28, except those with a clear alternative 
explanation (eg, disease progression) or transient (≤ 72 hours) abnormal laboratory values 
without associated clinically significant signs or symptoms based on investigator determination.  
All DLTs will be assessed by the investigator using CTCAE v4.03 criteria. 
Individual subject dose reductions may be made based on events observed at any time during 
treatment with study drug; however, for the purposes of determining the safe and tolerated dose 
of itacitinib in combination with corticosteroids, decisions will be made based on events that are 
observed from the first day of study drug administration through and including Day 28.  A lower 
recommended dose may subsequently be determined based on relevant toxicities that become 
evident after Day 28. 
In order to be included in the tolerability review, subjects must have received the cohort-specific 
dose of itacitinib for at least 75% of the days (ie, 21 days) during the 28-day surveillance period 
or have experienced a DLT.  At each age-specific cohort, additional subjects may be enrolled to 
achieve a minimum cohort size of approximately 10 subjects, should discontinuation/withdrawal 
or dose interruptions/reductions result in a subject being nonevaluable.  All safety information, 
including the AE data from the replaced subjects, will be reviewed during the dose tolerability 
review process. 
A DLT is defined as any of the following: 
• Grade 4 neutropenia lasting more than 7 days or a ≥ 90% decrease in ANC from 
baseline that can reasonably be attributed to study treatment. 
• Platelet count < 10 × 109/L that can be reasonably attributed to study treatment, and 
does not recover to ≥ 20 × 109/L after 2 weeks.  Recovery is defined as platelets 
≥ 20 × 109/L in the absence of platelet transfusion in the 7 days preceding the platelet 
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recovery date.  In case the platelet count was < 20 × 109/L at baseline, they should at 
least reach the baseline level. 
• Secondary graft failure, defined as > 95% recipient cells any time after engraftment 
with no signs of relapse, or retransplantation because of secondary neutropenia 
(< 0.5 × 109/L) and/or thrombocytopenia (< 30 × 109/L; Olsson et al 2013). 
• Any Grade ≥ 3 nonhematologic toxicity that can be reasonably attributed to study 
treatment.   
Any Grade ≥ 3 nonhematologic toxicities that may be related to underlying GVHD 
(eg, nausea, vomiting, diarrhea, rash) will not be considered as DLTs. 
• Any Grade ≥ 3 clinical chemistry laboratory abnormalities that are considered 
clinically significant that can reasonably be attributed to study treatment.  Transient 
(≤ 72 hours) abnormal laboratory values without associated clinically significant 
signs and symptoms and not leading to hospitalization will not be considered as 
DLTs. 
• Any toxicity that can be reasonably attributed to study treatment and leading to 
treatment discontinuation for more than 2 weeks. 
Subjects will be monitored according to Section 9.8.   
In all cases, investigators are free to employ any measures or concomitant medications, after 
discussion with the sponsor, necessary to optimally treat the subject. 
5.6.2.1. 
Follow-Up of Dose-Limiting Toxicities  
Any DLT should be followed until it resolves to baseline or appears to have stabilized for a 
minimum of 4 weeks.  During follow-up, subjects should be seen as often as medically indicated 
to ensure safety. 
5.6.3. 
Criteria and Procedures for Dose Interruptions and Modifications of Itacitinib 
If the drugs need to be interrupted due to toxicity, subjects should be evaluated on a weekly basis 
until resolution/improvement of the AE.  Subjects may resume treatment if no medical condition 
or other circumstance exists that, in the opinion of the investigator, would make the subject 
unsuitable for further participation in the study.  Treatment with itacitinib may be delayed up to 
14 days to allow for resolution of toxicity.  The investigator should contact the sponsor medical 
monitor to discuss cases where treatment has been delayed for more than 14 days before 
restarting treatment. 
Because subjects may enter the study with compromised bone marrow function, these dose 
reductions are provided as guidelines (see Table 3 and Table 4); individual decisions regarding 
dose reduction should be made using clinical judgment and an individual benefit/risk assessment, 
taking into account relatedness of the AE to the study drug and the subject's underlying 
condition.  Adverse events that have a clear alternative explanation or transient (≤ 72 hours) 
abnormal laboratory values without associated clinically significant signs or symptoms may be 
exempt from dose-reduction rules. 
The starting dose in each cohort may be reduced based on toxicity (ie, approximately 50% of the 
initial dose in each cohort).  The dose might also be modified based on PK data.  Subjects who 
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are unable to tolerate itacitinib at the reduced dose (50% decrease of the initial dose in each 
cohort) should be withdrawn from study treatment.  The sponsor's medical monitor may be 
consulted for advice. 
Table 3: 
Guidelines for Interruption and Restarting of Itacitinib 
ADVERSE EVENT 
ACTION TAKEN 
Chemistry 
• AST and/or ALT > 3.0 × ULN  
• Interrupt for up to 14 days until the toxicity has resolved to 
≤ Grade 1.  Exceptions require sponsor approval. 
• Restart at previous dose.  If assessed as related to itacitinib, 
restart at next lower dose and monitor as clinically indicated. 
• Total bilirubin elevations that occur in 
the presence of GVHD response that 
cannot be attributed to new liver 
GVHD or concomitant therapy. 
Total bilirubin 3.0-5.0 × ULN: 
• Reduce dose by 1 level and repeat assessment within 7 days.  If 
elevation persists: 
- Interrupt until bilirubin ≤ 1.5 × ULN. 
- Monitor LFTs weekly or more frequently as appropriate. 
- Resume previous dose if resolved in 14 days; if > 14 days, 
maintain reduced dose. 
Total bilirubin > 5.0-10.0 × ULN: 
• Interrupt and repeat assessment within 7 days.  If elevation 
persists: 
- Keep interruption until bilirubin ≤ 1.5 × ULN. 
- Monitor LFTs weekly or more frequently as appropriate. 
- Resume previous dose if resolved in 14 days; if > 14 days, 
resume at reduced dose. 
Total bilirubin > 10.0 × ULN: 
• Interrupt and repeat assessment within 7 days.  If elevation 
persists: 
- Keep interruption until bilirubin ≤ 1.5 × ULN. 
- Monitor LFTs weekly or more frequently as appropriate. 
- Resume at reduced dose if resolved in 14 days; if > 14 days, 
discontinue treatment and monitor as appropriate. 
• Total bilirubin elevations that occur in 
subjects with Stage 1/2 liver GVHD 
that cannot be attributed to worsening 
liver GVHD or concomitant therapy. 
Total bilirubin > 3.0 × ULN:  
• Repeat assessment within 7 days.  If elevation persists: 
- Reduce dose by 1 dose level. 
- Resume previous dose if bilirubin ≤ 3.0 × ULN. 
Hematology 
• ANC < 0.5 × 109/L, suspected as 
unrelated to study treatment (eg, 
GVHD, active cytomegalovirus 
viremia). 
• Reduce dose by 1 dose level. 
• Monitor ANC count as clinically indicated. 
• Resume previous dose if ANC count is ≥ 0.5 × 109/L for more 
than 7 days. 
• ANC < 0.5 × 109/L, suspected as 
related to study treatment. 
• Interrupt for up to 14 days. 
• Monitor ANC count as clinically indicated. 
• Resume at a reduced dose if ANC count is ≥ 0.5 × 109/L for 
more than 7 days.  If the subject's ANC count remains at 
≥ 0.5 × 109/L for more than 7 days after resuming treatment at a 
lower dose, the previous dose may be resumed. 
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Table 3: 
Guidelines for Interruption and Restarting of Itacitinib (Continued) 
ADVERSE EVENT 
ACTION TAKEN 
Hematology (continued) 
• Platelet count is < 10 × 109/L, or 
platelet count has decreased by ≥ 50% 
from baseline, suspected as unrelated to 
study treatment. 
• Reduce dose by 1 dose level. 
• Monitor platelet count as clinically indicated. 
• Resume at previous dose if platelet count returns to ≥ 20 × 109/L 
for more than 7 days. 
• Platelet count is < 10 × 109/L, or 
platelet count has decreased by ≥ 50% 
from baseline, suspected as related to 
study treatment. 
• Interrupt for up to 14 days. 
• Monitor platelet count as clinically indicated. 
• Resume at a reduced dose if platelet count returns spontaneously 
(without transfusion support) to ≥ 20 × 109/L for more than 
7 days or within 75% of baseline value.  If the subject's platelet 
count remains at ≥ 20 × 109/L without transfusion support for an 
additional 7 days, the previous dose of study drug may be 
resumed. 
Other toxicities  
• Any Grade 1 or Grade 2 toxicity. 
• Continue treatment and manage the toxicity. 
• Monitor as clinically indicated. 
• Any Grade 3 toxicity, if clinically 
significant and not manageable by 
supportive care. 
• Interrupt up to 14 days until toxicity resolves to ≤ Grade 1. 
• Restart at same dose; if assessed as related to itacitinib, restart at 
next lower dose and monitor as clinically indicated. 
• Any recurrent Grade 3 toxicity at 
100 mg QD dose. 
• Discontinue study treatment; follow-up per Protocol.  
Exceptions require sponsor approval. 
• Any other Grade 4 toxicity. 
• Discontinue study treatment; follow-up per Protocol. 
ALT = alanine aminotransferase; ANC = absolute neutrophil count; AST = aspartate aminotransferase; 
GVHD = graft-versus-host disease; LFT = liver chemistry test; QD = once daily; ULN = upper limit of normal. 
Table 4: 
Potential Dose Reduction and Increase Levels for Itacitinib 
Current Dose 
First Dose Reduction 
Second Dose Reduction 
Initial dose for each cohort 
disclosed in Section 5.2.1 
50% 
Discontinue 
5.6.4. 
Tapering of Itacitinib 
If a subject has achieved CR or VGPR at Day 180, investigators may begin to taper the dose of 
itacitinib by 1 dose level provided corticosteroids have been discontinued for at least 8 weeks 
following institutional guidelines.  Subsequent tapering may occur within 28 to 56 days after the 
initial taper as appropriate. 
Subjects who are still receiving calcineurin inhibitors or other agents for GVHD prophylaxis at 
this time may continue to do so at the treating investigator's discretion. 
Investigators wishing to initiate a taper of itacitinib at an earlier timepoint may do so upon 
consultation with approval from the sponsor's medical monitor. 
If GVHD signs/symptoms worsen during the taper of itacitinib, the dose may be escalated by 
1 dose level.  If the subject requires additional systemic therapy (includes restarting of 
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corticosteroids), then the subject will be considered as having progression of disease and 
withdrawn from study treatment. 
If subjects completely taper off itacitinib and GVHD signs/symptoms reappear at a later time, 
subjects may enter the re-treatment period at the investigator's discretion.  Assessments would be 
performed as per the re-treatment assessment schedule listed in Table 5. 
5.6.5. 
Criteria for Permanent Discontinuation of Itacitinib 
The occurrence of unacceptable toxicity not caused by the underlying disease or malignancy will 
be presumed to be related to study drug treatment and will require that the study drug be 
permanently discontinued.  Unacceptable toxicity is defined as follows: 
• Occurrence of an AE that is related to treatment with the study drug that, in the 
judgment of the investigator or the sponsor's medical monitor, compromises the 
subject's ability to continue study-specific procedures or is considered to not be in the 
subject's best interest. 
• Persistent AE requiring a delay of therapy for more than 14 days, unless a greater 
delay has been approved by the sponsor. 
5.6.6. 
Criteria and Procedures for Dose Interruptions or Modifications of 
Corticosteroids 
Modifications to the dose of corticosteroids should be made at the treating investigator's 
discretion. 
5.7. 
Withdrawal of Subjects From Study Treatment 
The decision to discontinue study treatment will not constitute study completion (see 
Section 5.7.3).  In the event that the decision is made to discontinue study treatment, the 
treatment period will be considered complete, and the follow-up period will begin. 
5.7.1. 
Withdrawal Criteria 
Subjects must be withdrawn from study treatment for the following reasons: 
• The subject has experienced an unacceptable toxicity. 
• Relapse of underlying malignancy or disorder. 
• The subject is unable to tolerate itacitinib at a reduced dose specified for cohort. 
• GVHD progression or lack of response.  Requirement for additional systemic therapy, 
including corticosteroid doses greater than those used on Study Day 1, will qualify for 
GVHD progression. 
• Further participation would be injurious to the subject's health or well-being, in the 
investigator's medical judgment. 
• The subject becomes pregnant (may be applicable for Cohort 1). 
• Consent is withdrawn. 
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• The study is terminated by the sponsor. 
• The study is terminated by the local health authority, IRB, or IEC. 
A subject may be withdrawn from study treatment as follows: 
• If, during the course of the study, a subject is found not to have met eligibility 
criteria, then the medical monitor, in collaboration with the investigator, will 
determine whether the subject should be withdrawn from the study. 
• If a subject is noncompliant with study procedures or study drug administration in the 
investigator's opinion, the sponsor should be consulted for instruction on handling the 
subject. 
5.7.2. 
Withdrawal Procedures  
In the event that the decision is made to permanently discontinue the study drug, the subject will 
be withdrawn from the study and the EOT visit should be conducted.  Reasonable efforts should 
be made to have the subject return for a follow-up visit as described in Section 6.5.  The last date 
of the last dose of study drug and the reason for subject withdrawal will be recorded in the eCRF. 
If a subject is withdrawn from study treatment: 
• The study monitor or sponsor must be notified. 
• The reason(s) for withdrawal must be documented in the subject's medical record and 
in the eCRF. 
• The EOT visit should be performed. 
• The date of the EOT visit should be registered in the IRT. 
• Subjects must be followed for safety until the time of the follow-up visit or until 
study drug–related toxicities resolve, return to baseline, or are deemed irreversible, 
whichever is longest. 
If the subject discontinues study treatment and actively withdraws consent for collection of 
follow-up data (safety follow-up or disease assessment), then no additional data collection 
should occur; however, subjects will have the option of withdrawing consent for study treatment 
but continuing in the follow-up period of the study for safety/efficacy assessments. 
5.7.3. 
Study Completion 
A subject will be considered as completing the study if they meet any of the following criteria: 
• Subject dies and a date of death is available. 
• Subject is known to have died; however, the date of death cannot be obtained.  
(Note:  Every effort must be made to obtain the date of death.) 
• Subject has discontinued study treatment and has withdrawn consent for collection of 
follow-up for new GVHD therapy and survival status. 
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5.7.4. 
Concomitant Medications 
5.7.4.1. 
Permitted Medications 
Concomitant treatments and/or procedures that are required to manage a subject's medical 
condition (including prophylactic and/or supportive care medications as described in Section 5.4) 
during the study will also be recorded in the eCRF. 
5.7.5. 
Restricted Medications 
The following medications have restrictions on use during the treatment period of the study: 
• Aspirin. 
• Coadministration with the following potent CYP3A inhibitors:  itraconazole, 
voriconazole, mibefradil, and clarithromycin.  If the subject's medical condition 
requires treatment with any of these drugs, dose reduction of itacitinib is 
recommended as follows (see rationale in Section 1.5): 
− In children 12 years of age and older, doses should be reduced to 100 mg QD. 
− In children 6 to < 11 years old, doses should be reduced to 50 mg QD. 
− In children 2 to < 6 years old, doses should be reduced to 25 mg QD. 
− In children > 8 kg but < 2 years old, doses should be reduced to 17.5 mg QD. 
− In children ≤ 8 kg but ≥ 28 days old, doses should be reduced to 0.7 mg/kg QD. 
The coadministration with those medications should be avoided during the 28-day 
surveillance period in subjects enrolled in Part 1 of the study.  The sponsor’s medical 
monitor may be consulted for advice when using these agents.  No dose adjustment is 
recommended for concomitant administration of other CYP3A4 inhibitors.   
• Coadministration with potent CYP3A4 inducers. 
• If concomitant administration of an anticoagulant/antiplatelet medication is indicated, 
then caution and enhanced monitoring is required.  History of thrombocytopenia 
should be a factor in the choice of anticoagulant and dose. 
5.7.6. 
Prohibited Medications 
The following medications are prohibited during the treatment period of the study: 
• Any concurrent anticancer therapy (eg, chemotherapy, radiation therapy, surgery, 
immunotherapy, biologic therapy) intended to treat malignancy relapse or recurrence.  
Maintenance therapy with TYK inhibitors for high-risk Philadelphia 
chromosome−positive leukemia and FLT3 inhibitors for FLT3+ acute myeloid 
leukemia may be used with sponsor approval.   
• Any secondary GVHD therapy due to insufficient response/progression on study 
treatment. 
• Concomitant use of targeted therapies with anti-GVHD activity, including but not 
limited to tumor necrosis factor alpha inhibitors and IL-6 receptor inhibitors. 
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•
Concomitant use of a JAK inhibitor.
•
Initiating therapy with an investigational medication unless otherwise approved by
the medical monitor.
•
Receipt of live (including attenuated) vaccines during the first year of study.
6.
STUDY ASSESSMENTS
All study assessments will be performed as indicated in the schedule of assessments (see 
Table 5) and all laboratory assessments will be performed as indicated in Table 6.  Table 7 
presents a summary of clinical laboratory analytes to be assessed.  The order of assessments is 
suggested by the order of mention within the schedule.  See Section 7 for instructions on each 
assessment.  Further details of study procedures and assessments can be found in the study 
reference manual. 
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Table 5: 
Schedule of Assessments 
Visit Day 
Item 
Section 
Screening  
Treatmenta 
Follow-Up 
-28 to -1 
D1 
D7 
D14 
D21 
D28 
D35 
D42 
D49 
D56b 
D100 
D180 
D365c EOTd 
Re-
Treatmente 
Safetyf 
GVHDg Survivalh 
Informed consent 
7.1 
X 
Inclusion/exclusion criteria 
3 
X 
X 
Contact IRT 
7.2  
X 
X 
X 
X 
X 
X 
X 
X 
Demography/disease history 
7.3 
X 
Prior/concomitant medications 
7.4 
X 
X 
X 
X 
X 
Supportive care medications 
5.4 
X 
X 
X 
X 
X 
AE assessment 
7.5.1  
X 
X 
X 
X 
X 
Physical examination 
7.5.2  
X 
X 
X 
X 
X 
X 
X 
X 
X 
X 
X 
X 
X 
X 
X 
Height and weighti 
7.5.2 
X 
Xj 
X 
X 
X 
X 
X 
X 
X 
X 
X 
X 
X 
X 
X 
X 
Vital signs 
7.5.3  
X 
Xj 
X 
X 
X 
X 
X 
X 
X 
X 
X 
X 
X 
X 
X 
ECOG and Lansky scale 
performance status 
7.5.4  
X 
Xj 
X 
X 
X 
X 
X 
X 
X 
X 
X 
X 
X 
X 
X 
12-lead ECG 
9.5.4 
X 
Xj 
As indicated 
X 
aGVHD grading and response 
7.6.1  
X 
Xj 
X 
X 
X 
X 
X 
cGVHD assessment 
7.6.2 
X 
As indicated 
X 
X 
X 
X 
Chimerism assessment/graft 
failure 
7.6.3 
X 
Xj 
As indicated 
PTLD assessment 
7.6.4  
As indicated 
Underlying disease relapse 
assessment 
7.6.5 
Xj 
As indicated 
Dispense study drug 
5.1 
X 
X 
X 
X 
X 
Study drug compliance 
5.5 
X 
X 
X 
X 
X 
X 
Steroid dose monitoring 
5.3 
X 
X 
X 
X 
Survival follow-up 
6.5.3  
X 
New GVHD therapies 
6.5.2 
X 
ECG = electrocardiogram; PTLD = post-transplant lymphoproliferative disorder. 
a A ± 3-day window is permitted to facilitate scheduling during the treatment phase. 
b After Day 56, visits will occur every 28 days and will include all Day 56 assessments. 
c The Day 365 visit will also serve as the regularly scheduled visit occurring every 28 days after Day 56 (ie, Day 364). 
d A ± 7-day window is permitted.  A second EOT should occur if the subject restarts itacitinib and subsequently discontinues treatment. 
e Re-treatment assessments occur every 28 days ± 3 days. 
f 30 to 35 days after EOT. 
X 
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g Every 8 weeks ± 7 days after EOT.  Acute GVHD assessments are required every 28 days ± 7 days during survival follow-up for subjects who completed study treatment or discontinued early 
withdrew for reasons other than GVHD progression of GVHD. 
h Every 8 weeks ± 7 days. 
i 
 
j If a screening assessment was performed within 3 days of Day 1, it does not need to be repeated on Day 1. 
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Table 6: 
Laboratory Assessments 
Visit Day 
Item 
Section 
Screening 
Treatmenta 
 
 
 
 
-28 to -1 
D1b 
D7 D14 D21 
D28 
D35 D42 D49 D56c D100 D180 D365d 
EOTe 
Re-
Treatmentf 
Safety 
Follow-Upg 
GVHD 
Follow-
Up  
Chemistry panelh 
7.5.6.1 
X 
X 
X 
X 
X 
X 
X 
X 
X 
X 
Xi 
Xi 
X 
X 
X 
X 
Xj 
Hematologyh 
7.5.6.2 
X 
X 
X 
X 
X 
X 
X 
X 
X 
X 
Xi 
 
X 
X 
X 
X 
 
Hepatitis 
screening 
7.5.6.4 
Xk 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
HIV screening 
7.5.6.5 
Xk 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
Adenovirus, 
CMV, and EBV 
blood DNA-PCR 
7.5.6.6 
 
Xl 
Xm 
X 
Xm 
 
 
Serum pregnancy 
test (childbearing 
females only): 
may apply only to 
Cohort 1 
7.5.6.3 
X 
 
X 
 
 
 
Urine pregnancy 
testn (childbearing 
females only); 
may apply only to 
Cohort 1 
7.5.6.3 
 
X 
 
 
 
 
PK assessmenth,o 
7.7 
 
Xp 
X 
 
 
Xp 
 
 
 
 
 
 
 
 
 
 
 
a A ± 3-day window is permitted to facilitate scheduling during the treatment period. 
b Day 1 laboratory assessments do not need to be repeated if screening assessments were performed within the preceding 7 days, except for PK. 
c After Day 56, visits will occur every 28 days and will include all Day 56 assessments. 
d The Day 365 visit will also serve as the regularly scheduled visit occurring every 28 days after Day 56 (ie, Day 364). 
e A ± 7-day window is permitted.  A second EOT should occur if the subject restarts itacitinib and subsequently discontinues treatment. 
f Re-treatment assessments occur every 28 days ± 3 days. 
g 30 to 35 days after EOT. 
h Efforts should be made to use the minimal possible blood volume for performing there tests.  
i Does not need to be repeated if test is performed within 7 days. 
j Liver testing including total bilirubin. 
k Test results before transplantation are acceptable. 
l PCR test results are not required for subject eligibility. 
m To be performed weekly as long as GVHD is active and then as clinically indicated. 
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n Urine pregnancy tests are required every 28 days. 
o Phase 1:  Samples to be collected at 1 hour ± 15 minutes, 2 hours ± 30 minutes, 4 hours ± 30 minutes, 6 hours ± 30 minutes, and 12 hours ± 60 minutes (12 hours only if 
inpatient) on Days 1, 7, and 28 and at predose on Days 7 and 28.  Phase 2:  Samples to be collected at predose, 1 hour ± 15 minutes, 2 hours ± 30 minutes, and 4 hours 
± 30 minutes on Day 7. 
p The PK assessment may be performed solely on Day 7 if blood volume sampling limits prohibit sampling on all 3 PK days. 
q 
 
r Day 56 only. 
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Table 7: 
Clinical Laboratory Analytes 
Serum Chemistries 
Hematologya 
Other 
Albumin 
Alkaline phosphatase 
ALT 
AST 
Bicarbonate or CO2 
Blood urea nitrogen 
Calcium 
Chloride 
Creatinine 
Glucose 
Lactate dehydrogenase 
Lipid profile (total cholesterol, 
high-density lipoprotein, 
low-density lipoprotein, and 
triglycerides) 
Phosphorus 
Potassium 
Sodium 
Total bilirubin 
Total protein 
Hematocrit 
Hemoglobin 
Mean corpuscular volume 
Reticulocytes 
Platelet count 
Red blood cell count 
White blood cell count 
White blood cell differential 
(5 parts): 
• Basophils 
• Eosinophils 
• Lymphocytes 
• Monocytes 
• Neutrophils 
Serum pregnancy testb 
Urine pregnancy testb 
Hepatitis and HIV 
Screening Testsc 
Hepatitis B surface antigen 
Hepatitis B surface antibody 
Hepatitis B core antibody 
HCV antibody 
HCV-RNA 
HBV-DNA 
HIV 
Adenovirus, EBV, and 
CMV Assessments 
Adenovirus-DNA 
EBV-DNA 
CMV-DNA 
ALT = alanine aminotransferase; AST = aspartate aminotransferase; CMV= cytomegalovirus; EBV= Epstein-Barr 
virus; HBV = hepatitis B virus; HCV = hepatitis C virus. 
a Hematology and chemistry assessments will be performed locally. 
b May be applicable to Cohort 1 only. 
c Test results obtained before transplantation are acceptable. 
All possible measures should be taken to reduce pain and discomfort (eg, use of local anesthesia 
before venipunctures, noninvasive measure should be preferred and timing coordinated with 
daily activities as far as possible; European Commission 2017).  Physical pain and discomfort 
intensity must be assessed and regularly monitored and treated according to local appropriate 
guidance (eg, ethical considerations for clinical studies on medicinal products conducted with 
minors), particularly in neonates and children who cannot express it verbally.  In order to 
minimize pain, discomfort, and fear, facilities should be appropriate to childcare, and the 
personnel should be trained to look after children and supervised by experienced health care 
professionals.  The investigational site’s staff should be trained to communicate with both the 
parents/legally designated representative and the children. 
The degree of burden and risk threshold will be constantly monitored by the investigator. 
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6.1. 
Screening 
The screening period is the interval between signing the ICF and the date of first dose of study 
treatment (Cycle 1 Day 1).  The screening period may not exceed 28 days.  Informed consent 
must be obtained from each subject (parent or legal guardian) before performing any 
study-specific procedures that are not considered standard of care.  Assessments that are required 
to demonstrate eligibility may be performed over the course of 1 or more days during the 
screening process. 
Procedures conducted as part of the subject's routine clinical management (eg, complete blood 
count) and obtained before signing of informed consent may be used for screening or baseline 
purposes, provided that the procedure meets the Protocol-defined criteria and has been 
performed within 28 days before the first day of study drug administration.  All information 
associated with eligibility requirements must be entered into the appropriate eCRF pages. 
Results from the screening visit evaluations will be reviewed to confirm subject eligibility before 
enrollment/administration of study treatment.  
 chimerism results are not 
mandatory for enrollment decision.  Tests with results that fail eligibility requirements may be 
repeated during the screening period if the investigator believes the results to be in error or 
believes that eligibility status has changed (eg, following recovery from an infection).  For 
screening assessments that are repeated, the most recent available result before administration of 
study drug will be used to determine subject eligibility. 
6.2. 
Treatment 
The treatment period begins on the day that the subject receives the first dose of study drug 
through the point at which the principal investigator at the study site determines that the subject 
will be permanently discontinued from study drug.  Dates for subsequent study visits will be 
determined based on this day and should occur within ± 3 days of the scheduled date unless 
delayed for safety reasons.  During the Day 1 visit, results from screening visit evaluations 
should be reviewed to determine whether the subject continues to meet the eligibility 
requirements as specified in the Protocol. 
6.3. 
End of Treatment 
If a decision is made that the subject will permanently discontinue study treatment, the EOT visit 
should be conducted.  If the EOT visit coincides with a regular study visit, the EOT evaluations 
will supersede those of that scheduled visit, and the data should be entered in the EOT visit in the 
eCRF.  The subject should be encouraged to return for the follow-up visit. 
6.4. 
Re-Treatment 
Subjects will be required to follow the re-treatment assessment schedule as outlined in Table 5.  
Subjects are only permitted to restart treatment once if they experience recurrent GVHD after the 
taper of initial study treatment is completed.  Subjects who complete re-treatment will repeat the 
EOT visit and subsequent safety, GVHD, and survival follow-up visits. 
Corticosteroid tapering will be performed at the investigator's discretion.  Investigators wishing 
to initiate a taper of itacitinib earlier than Day 180 may do so upon consultation with and 
approval from the sponsor's medical monitor. 
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6.5. 
Follow-Up 
6.5.1. 
Safety Follow-Up 
The safety follow-up period is the interval between the EOT visit and the scheduled follow-up 
visit, which should occur 30 to 35 days after the EOT visit (or after the last dose of study drug if 
the EOT visit was not performed).  Adverse events and SAEs must be reported up until at least 
30 days after the last dose of study drug, the date of the follow-up visit, or until toxicities 
resolve, return to baseline, or are deemed irreversible, whichever is longest. 
If a subject withdrew from treatment due to reasons other than disease progression, GVHD 
staging and grading will be repeated at the safety follow-up visit. 
6.5.2. 
Post-Treatment GVHD Follow-Up 
Subjects who completed study treatment or discontinued treatment for reasons other than GVHD 
progression will be followed every 28 days (± 7 days) after the safety follow-up visit until any of 
the following occurs: 
• GVHD progression. 
• Initiation of a new anti-GVHD therapy. 
• Relapse/recurrence of underlying hematologic disease. 
• A maximum of 24 months from Day 1. 
6.5.3. 
Survival Follow-Up 
Subjects who complete post-treatment follow-up, experience GVHD progression, or require a 
new anti-GVHD therapy should be contacted by telephone, email, or visit at least every 8 weeks 
(± 7 days) after EOT to assess for new GVHD therapy and survival status until death, withdrawal 
of consent, or the end of the study, whichever occurs first. 
6.6. 
Unscheduled Visits 
Unscheduled visits may be held at any time at the investigator's discretion, and appropriate 
clinical and laboratory measurements may be performed based on AEs or other findings.  Any 
assessments performed at those visits should be recorded in the eCRF. 
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7. 
CONDUCT OF STUDY ASSESSMENTS AND PROCEDURES 
7.1. 
Administration of Informed Consent Form 
Valid informed consent must be obtained from the study subject (parent or legal guardian) before 
conducting any study-specific procedures using an ICF approved by the local IRB/IEC that 
contains all elements required by ICH E6 and describes the nature, scope, and possible 
consequences of the study in a form understandable to the study subject.  Local and institutional 
guidelines for ICF content and administration must be followed; the original signed ICF must be 
retained by the head of the study site or its designee, and a copy of the signed ICF must be 
provided to the study subject.  The informed consent process for each subject must be 
documented in writing within the subject source documentation. 
7.2. 
Interactive Web Response Technology Procedure 
The IRT will be contacted to obtain a subject ID number when a subject enters the screening 
period.  Upon determining that the subject is eligible for study entry, the IRT will be contacted to 
obtain study drug assignment.  Additionally, the IRT will be contacted every 28 days to update 
study drug supply and at the EOT visit to record subject discontinuation from the study 
treatment.  See Section 5.1.1 for additional information.  
7.3. 
Demography and Medical History 
7.3.1. 
Demographics and General Medical History 
Demographic data and a general medical history will be collected at screening. 
7.3.2. 
Disease Characteristics and Treatment History 
A disease-targeted medical and medication history including hematologic malignancy type, 
current aGVHD staging, date of diagnosis, sites of disease, prior anticancer therapy, ablation 
therapy, prophylaxis therapy, donor type, and other details related to the disease under study will 
be collected at screening. 
7.4. 
Prior and Concomitant Medications and Procedures 
Prior and concomitant medications and procedures will be reviewed to determine subject 
eligibility.  All prior and concomitant medications (including prophylactic and/or supportive care 
medications) and measures must be recorded in the eCRF, and any medication received or 
procedure performed within 30 days before enrollment (Day 1) and up to the safety follow-up 
visit will be recorded in the eCRF.  The medication record will be maintained after signing the 
ICF to document concomitant medications, including any changes to the dose or regimen.  
Concomitant medications include any prescription, over-the-counter, or natural/herbal 
preparations taken or administered during the study period.  Concomitant treatments and/or 
procedures that are required to manage a subject's medical condition during the study will also be 
recorded in the eCRF. 
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7.5. 
Safety Assessments 
7.5.1. 
Adverse Events 
Adverse events will be monitored from the time the subject signs the ICF.  Subjects (parent or 
legal guardian) will be instructed to report all AEs during the study and will be assessed for the 
occurrence of AEs throughout the study.  In order to avoid bias in eliciting AEs, subjects will be 
asked general, nonleading questions such as "How are you feeling?"  All AEs (serious and 
nonserious) must be recorded on the source documents and eCRFs regardless of the assumption 
of a causal relationship with the study drug.  The definition, reporting, and recording 
requirements for AEs are described in Section 8. 
7.5.2. 
Physical Examination 
The targeted physical examination will be a symptom-directed evaluation conducted by the 
investigator or a medically qualified designee.  The targeted physical examination will include 
assessment(s) of the body systems or organs, as indicated by subject symptoms, AEs, or other 
findings.  Clinically notable abnormalities that are considered clinically significant in the 
judgment of the investigator are to be reported as AEs. 
Height and weight will be assessed and compared with the standard pediatric growth charts.  
7.5.3. 
Vital Signs 
Vital sign measurements include blood pressure, pulse, respiratory rate, body temperature, and 
body weight.  Blood pressure and pulse will be taken with the subject in the recumbent, 
semirecumbent, or sitting position.  Clinically notable abnormalities that are considered 
clinically significant in the judgment of the investigator are to be reported as AEs. 
7.5.4. 
Eastern Cooperative Oncology Group and Lansky Scale Performance Status 
ECOG performance status (Oken et al 1982; Table 8) for children ≥ 16 years old and Lansky 
Scale performance status (Lansky et al 1987; Table 9) for children < 16 years old will be 
assessed at screening and other study visits per Table 5.  Performance status must be assessed by 
a medically qualified individual and recorded in the eCRF. 
Table 8: 
Eastern Cooperative Oncology Group Performance Status Grades 
(Age ≥ 16 Years)  
Grade Performance Status 
0 
Fully active, able to carry on all predisease performance without restriction. 
1 
Restricted in physically strenuous activity but ambulatory and able to carry out work of a light 
or sedentary nature, eg, light house work, office work. 
2 
Ambulatory and capable of all self-care but unable to carry out any work activities.  Up and 
about more than 50% of waking hours. 
3 
Capable of only limited self-care, confined to bed or chair more than 50% of waking hours. 
4 
Completely disabled.  Cannot carry on any self-care.  Totally confined to bed or chair. 
5 
Dead. 
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Table 9: 
Lansky Scale (Age < 16 Years) 
Able to carry on normal activity; no special care is needed 
100 
Fully active. 
90 
Minor restriction in physically strenuous play. 
80 
Restricted in strenuous play, tires more easily, otherwise active. 
Mild to moderate restriction 
70 
Both greater restrictions of and less time spent in active play. 
60 
Ambulatory up to 50% of time, limited active play with assistance/supervision. 
50 
Considerable assistance required for any active play, fully able to engage in quiet play. 
Moderate to severe restriction 
40 
Able to initiate quiet activities. 
30 
Needs considerable assistance for quiet activity. 
20 
Limited to very passive activity initiated by others (eg, TV). 
10 
Completely disabled, not even passive play. 
7.5.5. 
Twelve-Lead Electrocardiograms 
A 12-lead ECG will be performed during screening with the subject in a recumbent or 
semirecumbent position after approximately 5 minutes of rest.  
The 12-lead ECG will be interpreted by the investigator at the site and will be used for 
immediate subject management.  The decision to include or exclude a subject or withdraw a 
subject from the study based on an ECG flagged as "Abnormal, Clinically Significant" is the 
responsibility of the investigator, in consultation with the sponsor's medical monitor, as 
appropriate.  
Electrocardiograms that are identified as abnormal and clinically meaningful compared with the 
screening assessment should be reported as AEs.  For such AEs, the findings of the abnormal 
ECGs and the corresponding baseline ECG findings must be reported in the eCRF.  
An additional ECG will be performed at the EOT visit; additional ECGs may be performed at the 
investigator's discretion as clinically indicated. 
7.5.6. 
Laboratory Assessments 
Blood draws for laboratory assessments will occur at study visits indicated in Table 6.  Blood 
draws should be completed whenever possible before the subject receives the morning dose of 
study drug.  Specific laboratory assessments are listed in Table 7. 
All laboratory assessments will be performed at a local (site) laboratory using institutional best 
practices.  Results and normal reference ranges will be entered into the eCRF. 
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7.5.6.1. 
Chemistry 
All chemistry panel assessments will be performed at a local (site) laboratory from blood 
samples collected using institutional best practices before administration of study drug.  Results 
and normal reference ranges will be entered into the eCRF. 
7.5.6.2. 
Hematology 
Hematology assessments, including complete blood count with differential, will be performed at 
a local (site) laboratory using institutional best practices before administration of study drug.  
Results and normal reference ranges will be entered into the eCRF. 
7.5.6.3. 
Pregnancy Testing 
A serum pregnancy test will be required for all females of childbearing potential during 
screening and at the EOT visit; this may apply to Cohort 1.  Urine pregnancy tests will be 
conducted every 28 days.  Urine pregnancy tests will be performed locally.  If a urine pregnancy 
test is positive, the results should be confirmed with a serum pregnancy test. 
If the serum pregnancy test is negative after a urine test was positive, the investigator will assess 
the potential benefit/risk to the subject and determine whether it is in the subject's best interest to 
resume study drug and continue participation in the study. 
7.5.6.4. 
Hepatitis Screening 
Subjects with active HBV or HCV infection that requires treatment or who are at risk for HBV 
reactivation are excluded from the study.  At risk for HBV reactivation is defined as hepatitis B 
surface antigen positive or anti–hepatitis B core antibody positive.  Prior test results obtained as 
part of standard of care before allo-HSCT confirming that a subject is immune and not at risk for 
reactivation (ie, hepatitis B surface antigen negative, surface antibody positive) may be used for 
purposes of eligibility, and tests do not need to be repeated.  Subjects whose immune status is 
unknown or uncertain must have results confirming immune status before enrollment. 
7.5.6.5. 
HIV Screening 
Subjects with an active HIV infection are excluded from the study.  Prior HIV screening results 
obtained as standard of care before allo-HSCT confirming the subject is HIV-negative may be 
used for determining eligibility, and tests do not need to be repeated.  Subjects whose HIV status 
is unknown must have results confirming negative status before enrollment.  
7.5.6.6. 
Adenovirus, EBV, and CMV Assessment 
Assessment of adenovirus, EBV, and CMV viral load (blood DNA PCR) is to be performed at 
Study Day 1.  PCR test results are not required for subject eligibility.  Subjects with positive 
PCR test results will be treated according to the local institutional guidelines. 
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7.6. 
Efficacy Assessments 
7.6.1. 
Acute Graft-Versus-Host Disease Staging and Grading 
Acute GVHD grading will be performed by the investigator on a weekly basis for the first 
8 weeks after the study start, then every 28 days thereafter.  Acute GVHD staging and grading 
will also occur on Days 100, 180, and 365; at the EOT visit; and during re-treatment (if 
applicable) and follow-up as indicated in Table 5. 
On-treatment aGVHD grading should be performed relative to the Day 1 assessment. 
If subjects withdrew due to reasons other than GVHD progression, then GVHD staging and 
grading will be assessed at the safety follow-up visit and every 28 days thereafter during survival 
follow-up until progression of GVHD, start of new anti-GVHD therapy, or death.  
Data regarding the quantification of aGVHD symptoms (extent of skin rash, total bilirubin level, 
volume of diarrhea) should be reported using MAGIC guidelines (Harris et al 2016); response 
will be assessed as per CIBMTR modifications to the CIBMTR response index as indicated in 
Appendix A (CIBMTR 2009). 
• Skin: 
− Only areas involved with active erythema should be used for determination of 
BSA staging based on the rule of nines. 
− A portion of a body area segment may be used for the quantification. 
− Desquamation or fluid-filled bullae should be reported if present, as these findings 
are the hallmark of Stage 4 skin GVHD.  
• Liver: 
− Liver GVHD staging is based solely on total (not conjugated/direct) serum 
bilirubin levels. 
− Liver GVHD manifesting as transaminitis without concomitant elevation in serum 
bilirubin should be diagnosed when the presence of GVHD is confirmed by liver 
biopsy (where appropriate) and score it as Stage 0.  
− If bilirubin levels were elevated before the diagnosis of GVHD in another target 
organ and do not increase further, liver GVHD should not be diagnosed in the 
absence of biopsy confirmation.  However, if hyperbilirubinemia develops at the 
same time or after the onset of GVHD in another target organ, liver GVHD is 
presumed to be present in the absence of an identified alternative cause. 
• Upper GI: 
− Symptoms of concern for upper GI GVHD include anorexia, nausea, vomiting, 
and dyspepsia, and assessment depends on close attention to caloric intake and 
symptom reporting. 
− An upper GI endoscopy should be performed whenever possible to confirm upper 
GI GVHD; however, the diagnosis may be made without biopsy confirmation. 
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− GVHD is typically not considered as a possible etiology when nausea lasts fewer 
than 3 days, or with fewer than 2 vomiting episodes per day for at least 2 days, or 
anorexia without weight loss. 
• Lower GI: 
− Staging of lower GI GVHD relies on accurate measurement of daily stool 
volumes and documentation of the presence of hematochezia or severe abdominal 
pain. 
− At the time of GVHD onset, staging should be based on the highest daily volume 
during the 3 days before diagnosis (excluding volumes attributable to procedures 
such as bowel preps or endoscopy). 
− After the initiation of treatment, lower GVHD staging should be based on the 
diarrhea volume using the following measurements (in the order of preference):  
1) average of 3 consecutive days, 2) average of 2 consecutive days, or 3) the 
volume on day of assessment. 
− Severe abdominal pain, ileus, and/or grossly bloody stool should be documented 
when present, because Stage 4 lower GI GVHD is staged based on the presence of 
these symptoms and is independent of volume of diarrhea. 
7.6.2. 
Chronic Graft-Versus-Host Disease Assessment 
Subjects will be assessed for signs and symptoms of cGVHD according to local institutional 
practice at screening, during the treatment phase, at EOT, and during re-treatment (if applicable) 
and follow-up as indicated in Table 5.  Definitive and possible manifestations of cGVHD should 
be assessed as per NIH consensus guidelines for cGVHD (Jagasia et al 2015). 
7.6.3. 
Graft Failure and Donor Chimerism 
Monitoring of graft failure will be primarily based on the monitoring of blood counts with 
subsequent confirmation by chimerism studies, as clinically indicated.  Donor chimerism after a 
HSCT involves identifying the genetic profiles of the recipient and of the donor and then 
evaluating the ratio of donor to recipient cells in the recipient's blood, bone marrow, or other 
tissue.  Chimerism testing using peripheral blood or bone marrow will be performed at the 
treating investigator's discretion according to local institutional practice as indicated in Table 5.  
In general, genomic polymorphisms should be assessed via polymerase chain reaction analysis of 
short tandem repeat loci from isolated lymphocytes or myeloid cells.  Fluorescence in situ 
hybridization analysis may also be used in cases with sex-mismatched transplants (Matsuda et al 
2004).  If a subject experiences graft failure (ie, initial blood or marrow donor chimerism > 5% 
declining to < 5% on subsequent measurements), any action taken, including rapid taper of 
immunosuppression, administration of nonscheduled donor lymphocyte infusion, stem cell boost, 
or other intervention(s), should be recorded on the appropriate eCRF. 
7.6.4. 
Post-Transplant Lymphoproliferative Disorder Assessment 
Staining for Epstein-Barr virus for PTLD testing will be performed according to local 
institutional practice at the treating investigator's discretion as indicated in Table 5. 
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7.6.5. 
Relapse/Recurrence of Underlying Hematologic Disease 
Subjects will be followed for relapse or recurrence of their underlying hematologic disease as per 
institutional standards during treatment and follow-up.  Details on hematologic disease relapse 
will be recorded on the appropriate eCRF. 
New malignancies should be reported as separate AEs per Section 8. 
7.7. 
Pharmacokinetic Assessments 
7.7.1. 
Blood Sample Collection  
Pharmacokinetic samples will be obtained on Days 1, 7, and 28 in Phase 1 and on Day 7 in 
Phase 2.  A predose (30-minute window) blood sample will be drawn, followed by study drug 
administration, and then serial sampling at the intervals shown in Table 10 and Table 11.  Day 1 
will not have a predose sample.  In Phase 1, Day 7 steady-state PK samples will be used for 
calculation of the PK parameters for dose confirmation of the starting dose.  If PK samples are 
missing for a subject, then PK sample collection should be performed at the next visit.  On PK 
sample collection days, subjects must refrain from taking study medication before arriving for 
the visit.  Food should be withheld at least 2 hours before dosing until 1 hour after study drug 
administration. 
The exact date and time of the PK blood draws will be recorded in the eCRF along with the date 
and time of the last dose of study drug preceding the blood draw (if applicable) and the time of 
the most recent meal.  Instructions for sample preparation and shipping will be provided in the 
Laboratory Manual.  Subjects (parent or legal guardian) will be instructed, and reminded, to hold 
the dose of study drug and consumption of food within 2 hours of arriving at the clinic on the 
day of the visit if PK samples are to be obtained.  Subjects (parent or legal guardian) will be 
instructed, and reminded, to provide the date and time of their prior dose of study drug and date 
and time of the most recent meal or snack consumed. 
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Table 10: 
Pharmacokinetic Sample Collection Time and Windows for Phase 1 
Study Daya 
Timing of Sample Relative to Itacitinib Administration 
Predose 
1 h 
± 15 min 
2 h 
± 30 min 
4 h 
± 30 min 
6 h 
± 60 min 
12 h 
± 60 min 
Day 1b 
– 
X 
X 
X 
X 
Xc 
Day 7 
X 
X 
X 
X 
X 
Xc 
Day 28b 
X 
X 
X 
X 
X 
Xc 
a Samples should be collected during active study drug administration.  If the subject is on a drug hold, then PK 
sample collection should be performed at the next visit. 
b The PK assessment may be performed solely on Day 7 if blood volume sampling limits prohibit sampling on all 
3 PK days. 
c 12-hour sample collected only if inpatient. 
Table 11: 
Pharmacokinetic Sample Collection Time and Windows for Phase 2 
Study Daya 
Timing of Sample Relative to Itacitinib Administration 
Day 7 
Predose 
1 h ± 15 min 
2 h ± 30 min 
4 h ± 30 min 
a Samples should be collected during active study drug administration.  If the subject is on a drug hold, then PK 
sample collection should be performed at the next visit. 
7.7.2. 
Bioanalytical Methodology and Analysis 
Plasma samples will be analyzed for itacitinib by a validated liquid chromatography–tandem 
mass spectrometry assay.  These samples will be analyzed by Incyte Corporation (Wilmington, 
DE) or its designee. 
Pharmacokinetic parameters will be calculated from the plasma concentrations of itacitinib 
according to a model-independent approach or population PK approach.  Instructions regarding 
sample collection, handling, and shipping will be provided in the laboratory manual. 
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8. 
SAFETY MONITORING AND REPORTING 
8.1. 
Adverse Events 
8.1.1. 
Definitions 
 For the purposes of this Protocol, an AE is defined as any untoward medical occurrence 
associated with the use of a drug in humans, whether or not considered drug related, that occurs 
after a subject provides informed consent.  Abnormal laboratory values or test results occurring 
after informed consent constitute AEs only if they induce clinical signs or symptoms, are 
considered clinically meaningful, require therapy (eg, hematologic abnormality that requires 
transfusion), or require changes in the study drug(s). 
8.1.2. 
Reporting 
Adverse events that begin or worsen after informed consent should be recorded on the Adverse 
Events form of the eCRF.  Conditions that were already present at the time of informed consent 
should be recorded on the Medical History form in the eCRF.  Monitoring for the occurrence of 
new AEs should be continued for at least 30 days after the last dose of study drug.  Adverse 
events (including laboratory abnormalities that constitute AEs) should be described using a 
diagnosis whenever possible, rather than by individual underlying signs and symptoms.  When a 
clear diagnosis cannot be identified, each sign or symptom should be reported as a separate AE. 
The term "disease progression" should be recorded as an AE/SAE itself only if there are no other 
identifiable AEs/SAEs associated with the disease progression at the time of reporting.  For 
events associated with disease progression, the relevant signs and symptoms should be reported 
using a diagnosis whenever possible, rather than the individual underlying signs and 
symptoms.  When a clear diagnosis cannot be identified, each sign or symptom should be 
reported as a separate AE.  If the events resulting from disease progression meet the criteria for 
an SAE (eg, resulted in hospitalization, a life-threatening event, or death), the specific event(s) 
should be reported as an SAE(s) as described in Section 8.3.2.  In both cases (ie, AEs or SAEs 
related to disease progression), for each event it should be indicated whether the event (diagnosis 
or signs and symptoms) is related to disease progression. 
The severity of AEs will be assessed using CTCAE v4.03 Grades 1 through 5.  If an event is not 
classified by CTCAE, the severity of the AE will be graded according to the scale below to 
estimate the grade of severity: 
Grade 1 
Mild; asymptomatic or mild symptoms; clinical or diagnostic observations only; 
intervention not indicated. 
Grade 2 
Moderate; minimal, local, or noninvasive intervention indicated; limiting age-appropriate 
activities of daily living. 
Grade 3 
Severe or medically significant but not immediately life-threatening; hospitalization or 
prolongation of hospitalization indicated; disabling; limiting self-care activities of daily 
living. 
Grade 4 
Life-threatening consequences; urgent intervention indicated. 
Grade 5 
Death due to AE. 
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The occurrence of AEs should be sought by nondirective questioning of the subject during the 
screening process after signing the ICF and at each visit during the study.  Adverse events may 
also be detected when they are volunteered by the subject during the screening process or 
between visits, or through physical examination, laboratory test, or other assessments.  To the 
extent possible, each AE should be evaluated to determine: 
• The severity grade (CTCAE Grade 1 to 5). 
• Whether there is at least a reasonable possibility that the AE is related to the study 
treatment:  suspected (yes) or not suspected (no). 
• The start and end dates, unless unresolved at final follow-up. 
• The action taken with regard to study drug. 
• The event outcome (eg, not recovered/not resolved, recovered/resolved, 
recovering/resolving, recovered/resolved with sequelae, fatal, unknown). 
• The seriousness, as per SAE definition provided in Section 8.3.1. 
Unlike routine safety assessments, SAEs are monitored continuously and have special reporting 
requirements (see Section 8.3.2). 
All AEs should be treated appropriately.  If an AE is treated with a concomitant medication or 
nondrug therapy, this action should be recorded on Adverse Event form and the treatment should 
be specified on the Prior/Concomitant Medications or Procedures and Non-Drug Therapy form 
in the eCRF. 
Once an AE is detected, it should be followed until it has resolved or until it is judged to be 
permanent; assessment should be made at each visit (or more frequently if necessary) of any 
changes in severity, the suspected relationship to the study drug, the interventions required to 
treat the event, and the outcome. 
When the severity of an AE changes over time for a reporting period (eg, between visits), each 
change in severity will be reported as a separate AE until the event resolves.  For example, 
2 separate AEs will be reported if a subject has Grade 1 diarrhea, meeting the definition of an 
AE, that lasts for 3 days before worsening to a Grade 3 severity.  The Grade 1 event will be 
reported as an AE with a start date equal to the day the event met the Grade 1 AE definition and 
a stop date equal to the day that the event increased in severity from Grade 1 to Grade 3.  The 
Grade 3 event will also be reported as an AE, with the start date equal to the day the event 
changed in intensity from Grade 1 to Grade 3 and a stop date equal to the day that the event 
either changed severity again or resolved.  For analysis purposes, this will be considered 1 AE 
for this subject, and the highest reported severity will be used. 
8.2. 
Laboratory Test Abnormalities 
Laboratory abnormalities that constitute an AE in their own right (considered clinically 
meaningful, induce clinical signs or symptoms, require concomitant therapy, or require changes 
in study drug) should be recorded on the Adverse Event form in the eCRF.  Whenever possible, a 
diagnosis rather than a symptom should be provided (eg, "anemia" instead of "low hemoglobin").  
Laboratory abnormalities that meet the criteria for AEs should be followed until they have 
returned to normal or an adequate explanation of the abnormality is found.  When an abnormal 
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laboratory test result corresponds to a sign or symptom of a previously reported AE, it is not 
necessary to separately record the laboratory test result as an additional event. 
Laboratory abnormalities that do not meet the definition of an AE should not be reported as AEs.  
A Grade 3 or 4 AE does not automatically indicate an SAE unless it meets the definition of 
serious, as defined in Section 8.3.1, and/or per the investigator's discretion.  A dose modification 
for the laboratory abnormality may be required (see Section 5.6) and should not contribute to the 
designation of a laboratory test abnormality as an SAE. 
8.3. 
Serious Adverse Events 
8.3.1. 
Definitions 
An SAE is defined as an event that meets at least 1 of the following criteria: 
• Is fatal or life-threatening. 
• Requires inpatient hospitalization or prolongation of existing hospitalization, unless 
hospitalization is a result of: 
− A routine treatment or monitoring of the studied indication not associated with 
any deterioration in condition. 
− An elective or preplanned treatment for a pre-existing condition that is unrelated 
to the indication under study and has not worsened since signing the ICF. 
− A treatment on an emergency outpatient basis for an event not fulfilling any of the 
definitions of a SAE and not resulting in hospital admission. 
− Any social reasons and respite care, in the absence of any deterioration in the 
subject's general condition. 
• Results in persistent or significant disability, incapacity, or a substantial disruption of 
a person's ability to conduct normal life functions. 
• Constitutes a congenital anomaly or birth defect. 
• Is considered to be an important medical event or a medically significant event that 
may not result in death, be immediately life-threatening, or require hospitalization but 
may be considered serious when, based upon appropriate medical judgment, the event 
may jeopardize the subject or may require medical or surgical intervention to prevent 
1 of the outcomes listed above. 
8.3.2. 
Reporting 
To ensure subject safety, every SAE, regardless of suspected causality (including events that 
may not be associated with the study drug[s] but may be associated with a study procedure or 
disease progression), unless otherwise specified by the Protocol, occurring after the subject has 
signed the ICF through the safety follow-up visit (unless the subject otherwise withdraws 
consent from further follow-up), must be reported to the sponsor (or designee) within 24 hours 
of learning of its occurrence.  Any SAEs occurring more than 30 days after the last dose of study 
drug should be reported to the sponsor, or its designee, only if the investigator suspects a causal 
relationship to the study drug.  An SAE occurring at a different time interval or otherwise 
considered completely unrelated to a previously reported SAE should be reported separately as a 
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new event.  Previously planned (ie, before providing informed consent) surgeries should not be 
reported as SAEs unless the underlying medical condition worsens over the course of the study. 
Information about all SAEs is collected and recorded on the Adverse Event form of the eCRF.  
The investigator must assess and record the causal relationship of each SAE to each specific 
study drug (itacitinib and the corticosteroid during the time it is given).  
The investigator must also complete the Incyte Serious Adverse Event Report Form, in English, 
and send the completed and signed form to the sponsor or designee within 24 hours of becoming 
aware of the SAE.  The investigator must provide a causality assessment, that is, assess whether 
there is at least a reasonable possibility that the SAE is related to the study treatment:  suspected 
(yes) or not suspected (no).  Refer to the Incyte Reference Guide for Completing the Serious 
Adverse Event Report Form. 
The contact information of the sponsor's study-specific representatives is listed in the 
investigator manual provided to each site.  The original copy of the SAE Report Form and the 
confirmation sheet must be kept at the study site. 
The investigator must report any new information regarding the SAE within 24 hours of 
becoming aware of the information in the same manner that the initial SAE Report Form was 
sent.  Follow-up information is recorded on an amended or new SAE Report Form, with an 
indication that it is follow-up to the previously reported SAE and the date of the original report.  
The follow-up report should include information that was not provided on the previous SAE 
Report Form, such as the outcome of the event (eg, resolved or ongoing), treatment provided, 
action taken with study drug because of the SAE (eg, dose reduced, interrupted, or discontinued), 
or subject disposition (eg, continued or withdrew from study participation).  Each recurrence, 
complication, or progression of the original event should be reported as follow-up to that event, 
regardless of when it occurs. 
If the SAE is not documented in the IB for itacitinib (new occurrence) and is thought to be 
related to the sponsor's study drug, the sponsor or its designee may urgently require further 
information from the investigator for reporting to health authorities.  The sponsor or its designee 
may need to issue an IN to inform all the heads of study sites and investigators involved in any 
study with the same drug that this SAE has been reported.  Suspected Unexpected Serious 
Adverse Reactions will be collected and reported to the competent authorities and relevant ethics 
committees in accordance with Directive 2001/20/EC, or as per national regulatory requirements 
in participating countries. 
8.4. 
Emergency Unblinding of Treatment Assignment 
Not applicable. 
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8.5. 
Pregnancy 
Pregnancy, in and of itself, is not regarded as an AE unless there is suspicion that study drug may 
have interfered with the effectiveness of a contraceptive medication or method.  When a 
pregnancy has been confirmed in a subject during maternal or paternal exposure to study drug, 
the following procedures should be followed in order to ensure subject safety: 
• The study drug must be discontinued immediately (female subjects only; see 
Section 5.6 for the maximum permitted duration of study drug interruption). 
• The investigator must complete and submit the Incyte Clinical Trial Pregnancy form 
to the sponsor or its designee within 24 hours of learning of the pregnancy. 
Data on fetal outcome and breastfeeding are collected for regulatory reporting and drug safety 
evaluation.  Follow-up should be conducted for each pregnancy to determine outcome, including 
spontaneous or voluntary termination, details of the birth, and the presence or absence of any 
birth defects, congenital abnormalities, or maternal and/or newborn complications, by following 
until the first well-baby visit.  Pregnancy should be recorded on a Clinical Trial Pregnancy form 
and reported by the investigator to the sponsor or its designee.  Pregnancy follow-up information 
should be recorded on the same form and should include an assessment of the possible causal 
relationship to the sponsor's study drug to any pregnancy outcome, as well as follow-up to the 
first well-baby visit or the duration specified in local regulations, whichever is later.  Refer to the 
Incyte Reference Guide for Completing the Clinical Trial Pregnancy Form. 
Any SAE occurring during pregnancy must be recorded on the SAE report form and 
submitted to the sponsor or designee.  
8.6. 
Warnings and Precautions 
Special warnings or precautions for the study drug, derived from safety information collected by 
the sponsor or its designee, are presented in the itacitinib IB.  Additional safety information 
collected between IB updates will be communicated in the form of INs.  Any important new 
safety information should be discussed with the subject during the study, as necessary.  If new 
significant risks are identified, they will be added to the ICF. 
8.7. 
Data Monitoring Committee 
An independent DMC will be established with the main purpose of reviewing results from 
prespecified scheduled safety analyses and for recommending a dose for subsequent clinical 
evaluation as appropriate. 
Details are included in the DMC charter. 
8.8. 
Product Complaints 
The sponsor collects product complaints on study drugs and drug delivery systems used in 
clinical studies in order to ensure the safety of study subjects, monitor quality, and facilitate 
process and product improvements. 
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All product complaints associated with material packaged, labeled, and released by the sponsor 
or its designee will be reported to the sponsor.  All product complaints associated with other 
study material will be reported directly to the respective manufacturer. 
The investigator or his/her designee is responsible for reporting a complete description of the 
product complaint via email or other written communication to the sponsor contact or respective 
manufacturer as noted in the packaging information.  Any AE associated with a product 
complaint should be reported as described in Section 8.1.2 of this Protocol. 
If the investigator is asked to return the product for investigation, he/she will return a copy of the 
product complaint communication with the product. 
9. 
STATISTICS 
9.1. 
Study Populations 
The populations to be analyzed include the following: 
• Efficacy evaluable population:  Subjects enrolled into the study. 
• Safety evaluable population:  Subjects enrolled into the study who received at least 
1 dose of study drug. 
• Pharmacokinetic evaluable population:  Subjects who receive at least 1 dose of study 
drug and provide at least 1 plasma sample (1 PK measurement) after study drug 
administration will be considered as potential PK evaluable subjects.  The study 
pharmacokineticist will review data listings of study drug administration and sample 
records to identify subjects to be excluded from analyses of PK data.  
9.2. 
Selection of Sample Size 
With regard to safety and efficacy endpoints, sample size is based on the clinical feasibility and 
consideration.  There is no hypothesis test.  Phase 1 is a safety run-in in which 10 evaluable 
subjects will be assessed in each cohort for the safety, tolerability, and PK of itacitinib in 
combination with corticosteroids.  For Phase 2, up to 30 subjects will be enrolled into each 
cohort (Cohort 1:  12 to < 18 years old, Cohort 2:  6 to < 12 years old, Cohort 3:  2 to < 6 years 
old, Cohort 4:  weighing > 8 kg to < 2 years, and Cohort 5:  28 days old to weighing ≤ 8 kg).  
This includes the 10 subjects enrolled in Phase 1 for each cohort. 
A total of 150 pediatric subjects will be enrolled into the study.   
With regard to PK endpoints, approximately 30 subjects are sufficient to meet the criteria 
suggested by regulators regarding sample size in pediatric PK studies (Wang et al 2012).  Given 
a CV% of 58% based on the preliminary PK data from study INCB39110-108 200 mg QD dose, 
16 subjects are needed to achieve sufficient power based on the criteria proposed by Wang et 
al.  Ten subjects will be included in the Phase 1 dose confirmation portion of the 
study.  Although this sample size is lower than the needed sample size to meet the criteria 
proposed by Wang et al (N = 16), it is expected to yield meaningful PK information given the 
expected exposure variability and minimum magnitude of exposure difference observed in 
pediatric patients as compared with adults that would prompt consideration of a possible dose 
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modification (~50%); the PK data will be considered along with available clinical data, such as 
safety data.  The sample size of the Phase 1 portion of the study was also chosen with the aim of 
minimizing the number of children exposed to itacitinib before any initial evaluation while 
obtaining a sufficient amount of data to guide decision-making.  
9.3. 
Level of Significance 
No formal statistical tests will be performed.  All CIs will be 95%. 
9.4. 
Statistical Analyses 
9.4.1. 
Primary Analyses 
For Phase 1, the following parameters will be summarized by cohort. 
• Frequency, duration, and severity of AEs and SAEs. 
• Changes in vital signs and clinical evaluations. 
• Changes in clinical laboratory blood samples. 
• Cmax, Cmin, Tmax, AUC, and Cl/F assessed at Day 1, 7, and 28. 
For Phase 2, the primary endpoint is ORR at Day 28, defined as the proportion of subjects 
demonstrating a CR, VGPR, or PR, as per standard criteria (Appendix A).  The primary analysis 
will be conducted once the last subject completes the Day 28 visit or withdraws from the study 
by cohort.  Summary statistics and 95% CI will be provided by cohort. 
9.4.2. 
Secondary Analyses 
For Phase 1, ORR at Day 28, defined as the proportion of subjects demonstrating a CR, VGPR, 
or PR will be summarized by cohort.  Their applicable 95% CI will be provided 
For Phase 2, Cmax, Cmin, Tmax, AUC, and Cl/F assessed at Day 7 will be summarized. 
For Phase 1 and 2, all the secondary analyses will be conducted for the efficacy evaluable 
population by cohort.  Summary statistics and their applicable 95% CI will be provided. 
• ORR, defined as the proportion of subjects demonstrating a CR, VGPR, or PR at 
Days 14, 56, and 100.  Summary statistics and applicable 95% CI will be provided. 
• NRM rate, defined as the proportion of subjects who died due to causes other than 
underlying hematological disorders at Months 6, 9, 12, and 24.  Cumulative incidence 
rates will be provided.  Summary statistics and applicable 95% CI will be provided. 
• Duration of response for responders will be calculated.  The DOR is defined from the 
time of the onset of response to either progression or death. 
• Time to response, defined as the interval from treatment initiation to first response, 
will be summarized by cohort. 
• Relapse rate of malignant and nonmalignant disorders, defined as the proportion of 
subjects whose underlying disease relapses.  The cumulative incidence rate and 
summary statistics will be provided. 
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• Malignant and nonmalignant disorders relapse–related mortality rate, defined as the 
proportion of subjects whose underlying disease relapses and has a fatal outcome.  
The cumulative incidence rate and summary statistics will be provided. 
• FFS rate at a timepoint, defined as the proportion of subjects who are still alive, have 
not relapsed, have not required additional therapy for aGVHD, and have not 
demonstrated signs or symptoms of cGVHD.  The Kaplan-Meier method will be 
used.  Summary statistics will be provided. 
• Overall survival, defined as the interval from treatment initiation to death due to any 
cause.  The Kaplan-Meier method will be used.  Summary statistics will be provided. 
• Clinical safety data (eg, AEs, infections) will be tabulated and listed. 
• Incidence rate of secondary graft failure, defined as > 95% recipient cells any time 
after engraftment with no signs of relapse OR retransplantation because of secondary 
neutropenia (< 0.5 × 109/L) and/or thrombocytopenia (< 20 × 109/L) within 2 months 
of transplant. 
• Average and cumulative corticosteroid dose at Days 28, 56, 100, and 180; proportion 
of subjects who discontinue corticosteroids at Days 56 and 100. 
• Proportion of subjects who discontinue immunosuppressive medication at Days 56 
and 100. 
• Incidence rate of aGVHD flares through Day 100. 
• Incidence rate of cGVHD at Days 180 and 365. 
 
     
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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9.5. 
Safety Analyses 
9.5.1. 
Adverse Events 
A TEAE is either any AE reported for the first time or worsening of a pre-existing event after 
first dose of study drug.  Analysis of AEs will be limited to TEAEs, but data listings will include 
all AEs, regardless of their timing to study drug administration.  Adverse events will be tabulated 
by the MedDRA preferred term and system organ class.  Severity of AEs will be based on the 
NCI CTCAE v4.03 (NCI 2010). 
• The subset of AEs considered by the investigator to have a relationship to study drug 
will be considered to be treatment-related AEs.  If the investigator does not specify 
the relationship of the AE to study drug, the AE will be considered treatment-related.  
The incidence of AEs and treatment-related AEs will be tabulated. 
9.5.2. 
Clinical Laboratory Tests 
Laboratory test values outside the normal range will be assessed for severity based on the normal 
ranges for the clinical reference laboratory.  The incidence of abnormal laboratory values and 
shift tables relative to baseline will be tabulated. 
Laboratory data will be classified into CTC grades for AEs (CTCAE v4.03).  The following 
summaries will be produced for the laboratory data: 
• Number and percentage of subjects with worst postbaseline CTC grade (regardless of 
baseline value) will be summarized.  Each subject will be counted only for the worst 
grade observed postbaseline. 
• Shift tables using CTC grades to compare baseline with the worst postbaseline value 
will be produced with CTC grade. 
• For laboratory parameters where CTC grades are not defined, shift tables to the worst 
postbaseline value will be produced using the low/normal/high classifications based 
on laboratory reference ranges.  
9.5.3. 
Vital Signs 
Descriptive statistics and mean change from baseline will be determined for vital signs (blood 
pressure, pulse, respiratory rate, and body temperature) at time assessments noted (Table 5).  
Vital signs will be reviewed for clinically notable abnormalities based on established age range–
adjusted standards as defined in the Statistical Analysis Plan. 
9.5.4. 
Electrocardiograms 
Electrocardiogram results will be reviewed for clinically notable abnormalities according to 
predefined criteria.  Subjects exhibiting clinically notable ECG abnormalities will be listed.  
Adverse events will be reported for clinically notable abnormalities that are considered clinically 
significant in the judgment of the investigator.  
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9.6. 
Pharmacokinetic and Pharmacokinetic/Pharmacodynamic Analyses 
The PK parameters of Cmax, Tmax, Cmin, AUC0-τ (AUC0-t on Day 1), and Cl/F will be calculated 
from the blood plasma concentrations of itacitinib using standard noncompartmental 
(model-independent) PK methods.  Pharmacokinetic calculations will be performed using 
commercial software such as WinNonlin® (Pharsight Corporation, Mountain View, CA).  
Nominal times will be used for in-stream data analyses.  In Phase 1, PK bridging between 
pediatric and adult GVHD patients will be based on steady-state AUC.  The totality of safety 
data will be considered for intrasubject dose modification, and in addition to safety, PK data will 
be used for intersubject dose modification for the study cohort and subsequent age specific 
cohorts.  In the absence of any difference in safety between pediatric subjects in the first cohorts 
in Phase 1 and adult GVHD patients, PK data will be used to guide a potential dose modification 
in pediatric subjects enrolled in subsequent cohorts.  Sixty-seven percent to 150% is the 
clinically insignificant range based on the variability of itacitinib PK.  To trigger a dose 
reduction, the lower bound of the 90% CI of the GMR for exposure (AUC) would have to be 
greater than 1.5.  To trigger a dose increase, the upper bound of the GMR 90% CI for exposure 
would have to be less than 0.67.  The new dose will be determined via simulation with the target 
that median exposures for a given dose across the cohort should fall between the interquartile 
exposure range observed in adult GVHD patients.  It should be noted that in adults, the PK 
sampling scheme included sampling at predose, 1 hour, 2 hours, and 4 to 8 hours (generally 
sampled close to 4 hours), and for comparison between adult and pediatric exposure, the 
pediatric data maybe modified to only include these timepoints in case the adult exposures are 
overestimated due to the sampling scheme.  
A population PK model will be developed using nonlinear mixed-effects modeling.  The initial 
structure of the model will be based on a population PK analysis in adults comprised of healthy 
volunteers and several patient populations including GVHD.  Stepwise modelling will be 
performed using forward addition/backward elimination exploring various intrinsic and extrinsic 
factors that may affect PK, such as patient demographics, disease status, and concomitant 
medications.  If clinically significant covariates are identified, simulation will be used for dose 
optimization.  The following covariates will be evaluated:  body weight, age, gender, race, 
ethnicity, concomitant administration of CYP3A inhibitors, concomitant administration of 
CYP3A inducers, renal function, hepatic function, and GVHD disease status (including affected 
organs and/or severity).  Models will be evaluated using standard goodness-of-fit plots, 
successful convergence, typical ETA plots, magnitude of the random effects, plausibility of 
parameter estimates, and precision of the parameters estimates.  Visual predictive checks and/or 
pcVPCs will also qualify the model.  Bootstrap analysis will be performed to test model stability 
and determine precision of the PK parameter estimates.  The VPC (or pcVPC) and bootstrap 
analyses will be stratified by age group.  Additional details of this analysis will be provided in a 
separate data analysis plan.   
The relationship between total exposure (AUC), as determined by modeling and simulation using 
individual posterior parameter estimates, and the primary efficacy endpoint ORR (as a binomial 
variable comprising nonresponders in one category and responders with CR, VGPR, and PR in 
the other category) will be explored graphically and quantitatively characterized using a logistic 
regression model whereby inclusion of total exposure as a predictor of response must be 
statistically significant at the p < 0.05 level for inclusion.  If total exposure is not significant in 
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the model, then the conclusion will be drawn that given the limited range of exposures, no 
relationship between PK and ORR was observed.  The same analysis will be triggered for any 
DLT in ≥ 25% of the subjects, that is, the relationship between exposure and DLT will be 
explored and characterized. 
9.8. 
Toxicity Monitoring 
Within each cohort, among the first 10 subjects enrolled in Phase 1 and evaluable for DLT, if 
there are more than 3 subjects with any DLT events occurring in the 28-day surveillance period, 
the study will be terminated.  A cohort can be expanded and proceed to subsequent steps if 3 or 
fewer out of 10 subjects in the cohort have a DLT occurring in the 28-day surveillance period. 
Study team will perform a review of safety and tolerability on a continual basis.  Additionally, 
regular safety calls with the investigators will be established during the Part 1 of each cohort.  
9.9. 
Analyses for the Data Monitoring Committee 
All safety data will be closely monitored.  An independent DMC will be established with the 
main purpose of reviewing results from prespecified scheduled safety, tolerability, and PK 
analyses as described in the DMC charter and for recommending a dose for subsequent clinical 
evaluation as appropriate. 
Investigator safety teleconferences will be scheduled at the frequency outlined in the DMC 
charter to review ongoing subject data. 
9.10. 
Interim Analysis 
No interim analysis is planned. 
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10. 
ETHICAL CONSIDERATIONS AND ADMINISTRATIVE 
PROCEDURES 
10.1. 
Investigator Responsibilities 
This study will be performed in accordance with ethical principles that originate in the 
Declaration of Helsinki and conducted in adherence to the study Protocol; GCPs as defined in 
Title 21 of the US CFR Parts 11, 50, 54, 56, and 312; ICH E6 GCP consolidated guidelines; and 
local regulatory requirements as applicable to the study locations. 
The investigator will be responsible for: 
• Permitting study-related monitoring, sponsor audits, IRB/IEC review, and regulatory 
inspections by providing direct access to source data and other relevant clinical study 
documents. 
− Monitoring:  Qualified representatives of the sponsor or its designee, study 
monitors, will monitor the study according to a predetermined plan.  The 
investigator must allow the study monitors to review any study materials and 
subject records at each monitoring visit. 
− Auditing:  Qualified representatives of the sponsor or its designee may audit the 
clinical study site and study data to evaluate compliance with the Protocol, 
applicable local clinical study regulations, and overall study conduct.  The 
investigator must allow the auditors to review original source records and study 
documentation for all subjects. 
− Regulatory inspection:  Regulatory authorities may conduct an inspection of the 
study and the site at any time during the development of an investigational 
product.  The investigator and staff are expected to cooperate with the inspectors 
and allow access to all source documents supporting the eCRFs and other 
study-related documents.  The investigator must immediately notify the sponsor 
when contacted by any regulatory authority for the purposes of conducting an 
inspection. 
• Obtaining informed consent and ensuring that the study subjects' questions have been 
answered and the subjects fully understand study procedures: 
− Informed consent must be obtained before any study-related procedures are 
conducted, unless otherwise specified by the Protocol. 
− Informed consent must be obtained using the IRB/IEC-approved version in a 
language that is native and understandable to the subject.  A template will be 
provided by the sponsor or its designee.  The sponsor or its designee must review 
and acknowledge the site-specific changes to the ICF template.  The ICF must 
include a statement that the sponsor or its designee and regulatory authorities have 
direct access to subject records. 
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• Obtaining approval from the IRB/IEC before the start of the study and for any 
changes to the clinical study Protocol, important Protocol deviations, routine updates, 
and safety information in accordance with institutional requirements and local law. 
− The investigator is responsible for ensuring that the safety reports provided by the 
sponsor are reviewed and processed in accordance with regulatory requirements 
and with the policies and procedures established by the IRB/IEC. 
• Adhering to the Protocol as described in this document and agreeing that changes to 
the Protocol procedures, with the exception of medical emergencies, must be 
discussed and approved, first, by the sponsor or its designee and, second, by the 
IRB/IEC.  Each investigator is responsible for enrolling subjects who have met the 
specified eligibility criteria. 
• Retaining records in accordance with all local, national, and regulatory laws, but for a 
minimum period of at least 2 years after the last marketing application approval in an 
ICH region and until there are no pending or contemplated marketing applications in 
an ICH region, or if not approved, 2 years after the termination of the test article for 
investigation to ensure the availability of study documentation should it become 
necessary for the sponsor or a regulatory authority to review. 
− The investigator must not destroy any records associated with the study without 
receiving approval from the sponsor.  The investigator must notify the sponsor or 
its designee in the event of accidental loss or destruction of any study records.  If 
the investigator leaves the institution where the study was conducted, the sponsor 
or its designee must be contacted to arrange alternative record storage options. 
− All eCRF data entered by the site (including audit trail), as well as computer 
hardware and software (for accessing the data), will be maintained or made 
available at the site in compliance with applicable record retention regulations.  
The sponsor will retain the original eCRF data and audit trail. 
10.2. 
Accountability, Handling, and Disposal of Study Drug 
The investigator is responsible for drug accountability at the study site; however, some of the 
drug accountability duties may be assigned to an appropriate pharmacist or other designee.  
Inventory and accountability records must be maintained and readily available for inspection by 
the study monitor and are open to inspection at any time by any applicable regulatory authorities.  
The investigator or designee must maintain records that document: 
• Delivery of study drug to the study site. 
• Inventory of study drug at the site. 
• Subject use of the study drug including pill or unit counts from each supply 
dispensed. 
• Return of study drug to the investigator or designee by subjects. 
The investigational product must be used only in accordance with the Protocol.  The investigator 
will also maintain records adequately documenting that the subjects were provided the specified 
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study drug.  These records should include dates, quantities, and any available batch or serial 
numbers or unique code numbers assigned to the investigational product and study subjects. 
Completed accountability records will be archived by the site.  The investigator or designee will 
be expected to collect and retain all used, unused, and partially used containers of study drug 
until verified by the study monitor (unless otherwise agreed to by the sponsor).  At the 
conclusion of the study, the investigator or designee will oversee shipment of any remaining 
study drug back to the sponsor or its designee for destruction according to institutional standard 
operating procedures.  If local procedures mandate on-site destruction of investigational supply, 
the site should (where local procedures allow) maintain the investigational supply until the study 
monitor inspects the accountability records in order to evaluate compliance and accuracy of 
accountability by the investigative site.  At sites where the study drug is destroyed before 
monitor inspection, the monitors rely on documentation of destruction per the site SOP. 
10.3. 
Data Management 
Data management will be performed in a validated database via an EDC system.  All data entry, 
verification, and validation will be performed in accordance with the current standard operating 
procedures of the Data Management Department at the sponsor or its designee.  The database 
will be authorized for lock once all defined procedures are completed. 
The investigator will be provided with access to an EDC system so that an eCRF can be 
completed for each subject.  Entries made in the eCRF must be verifiable against source 
documents; if updates to the database are not possible, any discrepancies should be explained 
and documented.  The investigator will be responsible for reviewing all data and eCRF entries, 
and will sign and date the designated forms in each subject's eCRF, verifying that the 
information is true and correct.  The investigator is responsible for the review and approval of all 
query responses. 
Protocol deviations will be identified and recorded in the Protocol Deviation form of the eCRF.  
The study monitor will reference the Monitoring Plan in order to ensure that each issue identified 
is appropriately documented, reported, and resolved in a timely manner in accordance with the 
plan's requirements. 
10.4. 
Data Privacy and Confidentiality of Study Records 
The investigator and the sponsor, or its designee, must adhere to applicable data protection laws 
and regulations.  The investigator and the sponsor, or its designee, are responsible for ensuring 
that sensitive personal information is handled in accordance with local data protection laws 
(including but not limited to HIPAA and GDPR) as applicable.  Appropriate consent for 
collection, use, and disclosure and/or transfer (if applicable) of personal information must be 
obtained in accordance with local data protection laws. 
Subject names will not be supplied to the sponsor or its designee.  Only the subject number will 
be recorded in the eCRF; if the subject's name appears on any other document (eg, laboratory 
report), it must be obliterated on the copy of the document to be supplied to the sponsor or its 
designee.  Study findings stored on a computer will be stored in accordance with appropriate 
technical and organizational measures as required by local data protection laws. 
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10.5. 
Financial Disclosure 
Before study initiation, all clinical investigators participating in clinical studies subject to FDA 
Regulation Title 21 Code of Federal Regulations (CFR) Part 54 – Financial Disclosure by 
Clinical Investigators (ie, "covered studies") are required to submit a completed Clinical 
Investigator Financial Disclosure form that sufficiently details any financial interests and 
arrangements that apply.  For the purpose of this regulation, "clinical investigator" is defined as 
any investigator or subinvestigator who is directly involved in the treatment or evaluation of 
research subjects, including the spouse and each dependent child of the clinical investigator or 
subinvestigator.  These requirements apply to both US and foreign clinical investigators 
conducting covered clinical studies. 
Any new clinical investigators added to the covered clinical study during its conduct must also 
submit a completed Investigator Financial Disclosure Form.  During a covered clinical study, 
any changes to the financial information previously reported by a clinical investigator must be 
reported to the sponsor or its designee.  At the conclusion of the covered clinical study, the 
clinical investigators will be reminded of their obligations.  In the event that the clinical 
investigator is not reminded, they nevertheless will remain obligated to report to the sponsor or 
its designee any changes to the financial information previously reported, as well as any changes 
in their financial information for a period of 1 year after completion of the covered clinical study. 
10.6. 
Publication Policy 
By signing the study Protocol, the investigator and his or her institution agree that the results of 
the study may be used by the sponsor, Incyte Corporation (Incyte), for the purposes of national 
and international registration, publication, and information for medical and pharmaceutical 
professionals.  Study results will be published in accordance with applicable local and national 
regulations.  If necessary, the authorities will be notified of the investigator's name, address, 
qualifications, and extent of involvement.  The terms regarding the publication of study results 
are contained in the agreement signed with the sponsor or its designee.  A signed agreement will 
be retained by the sponsor or its designee. 
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11. 
REFERENCES 
Alousi AM, Weisdorf DJ, Logan BR, et al. Etanercept, mycophenolate, denileukin, or 
pentostatin plus corticosteroids for acute graft-versus-host disease: a randomized phase 2 trial 
from the Blood and Marrow Transplant Clinical Trials Network. Blood 2009;114:511-517. 
Appelbaum FR. Hematopoietic-cell transplantation at 50. N Engl J Med 2007;357:1472-1475. 
Cahn JY, Bordigoni P, Tiberghien P, et al. Treatment of acute graft-versus-host disease with 
methylprednisolone and cyclosporine with or without an anti-interleukin-2 receptor monoclonal 
antibody: a multicenter phase III study. Transplantation 1995;60:939-942. 
Carlberg V, Simons E, Delano S, Huang JT. Pediatric Graft-Versus-Host Disease. In: Cotliar JA, 
ed. Atlas of Graft-versus-Host Disease: Approaches to Diagnosis and Treatment. Cham, 
Switzerland: Springer International Publishing AG; 2017:105-123. 
Carpenter PA, Macmillan ML. Management of acute graft-versus-host disease in children. 
Pediatr Clin North Am 2010;57:273-295. 
Center for International Blood & Marrow Transplant Research (CIBMTR). Clinical trial 
endpoints for patients with acute GVHD. 2009. 
https://www.cibmtr.org/Meetings/Materials/GVHDworkshop/pages/index.aspx. Accessed 
June 30, 2017. 
Choi J, Cooper, ML, Alahmari B, et al. Pharmacologic blockade of JAK1/JAK2 reduces GvHD 
and preserves the graft-versus-leukemia effect. PloS One 2014;9:e109799. 
Choi J, Ziga ED, Ritchey J, et al. IFNγR signaling mediates alloreactive T-cell trafficking and 
GVHD. Blood 2012;120:4093-4103. 
Clinical Trial Facilitation Group. Recommendations related to contraception and pregnancy 
testing in clinical trials. 2014. http://www.hma.eu/fileadmin/dateien/ Human_Medicines/01-
About_HMA/Working_Groups/CTFG/2014_09_HMA_CTFG_ Contraception.pdf. Accessed 
October 2, 2017. 
Couriel DR, Saliba R, de Lima M, et al. A phase III study of infliximab and corticosteroids for 
the initial treatment of acute graft-versus-host disease. Biol Blood Marrow Transplant 
2009;15:1555-1562. 
Cragg L, Blazar BR, Defor T, et al. A randomized trial comparing prednisone with 
antithymocyte globulin/prednisone as an initial systemic therapy for moderately severe acute 
graft-versus-host disease. Biol Blood Marrow Transplant 2000;6:441-447. 
Döring M, Cabanillas Stanchi KM, Mezger M, et al. Cytokine serum levels during 
post-transplant adverse events in 61 pediatric patients after hematopoietic stem cell 
transplantation. BMC Cancer 2015;15:607. 
European Commission. Ethical considerations for clinical trials on medicinal products conducted 
with minors - Recommendations of the expert group on clinical trials for the implementation of 
Regulation (EU) No 536/2014 on clinical trials on medicinal products for human use. 2017. 
https://ec.europa.eu/health/sites/health/files/files/eudralex/vol-10/2017_09_18_ethical_consid_ct 
_with_minors.pdf. Accessed November 19, 2018. 
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Flowers MED, Inamoto Y, Carpenter PA, et al. Comparative analysis of risk factors for acute 
graft-versus-host disease and for chronic graft-versus-host disease according to National 
Institutes of Health consensus criteria. Blood 2011;117:3214-3219. 
Glucksberg H, Storb R, Fefer A, et al. Clinical manifestations of graft-versus-host disease in 
human recipients of marrow from HL-A-matched sibling donors. Transplantation 
1974;18:295-304. 
Green T, Hind J. Graft-versus-host disease in paediatric solid organ transplantation: A review of 
the literature. Pediatr Transplant 2016;20:607-618. 
Harris AC, Young R, Devine S, et al. International, multicenter standardization of acute 
graft-versus-host disease clinical data collection: a report from the Mount Sinai Acute GVHD 
International Consortium. Biol Blood Marrow Transplant 2016;22:4-10. 
Itacitinib Investigator's Brochure. Wilmington, DE: Incyte Corporation. 
Jacobsohn DA, Vogelsang GB. Acute graft versus host disease. Orphanet J Rare Dis 
2007;4;2:35. 
Jagasia M, Arora M, Flowers ME, et al. Risk factors for acute GVHD and survival after 
hematopoietic stem cell transplantation. Blood 2012;119:296-307. 
Jagasia MH, Greinix HT, Williams KM, et al. National Institutes of Health Consensus 
Development Project on Criteria for Clinical Trials in Chronic Graft-versus-Host Disease: I. The 
2014 Diagnosis and Staging Working Group Report. Biol Blood Marrow Transplant 
2015;21:389-401. 
Khandelwal P, Millard HR, Thiel E. Hematopoietic stem cell transplantation activity in pediatric 
cancer between 2008 and 2014 in the United States: a Center for International Blood and 
Marrow Transplant Research Report. Biol Blood Marrow Transplant 2017;23:1342-1349. 
Lansky SB, List MA, Lansky LL, Ritter-Sterr C, Miller DR. The measurement of performance in 
childhood cancer patients. Cancer 1987;60:1651-1656. 
Lee SJ, Zahrieh D, Agura E, et al. Effect of up-front daclizumab when combined with steroids 
for the treatment of acute graft-versus-host disease: results of a randomized trial. Blood 
2004;104:1559-1564. 
Levine JE, Logan B, Wu J, et al. Graft-versus-host disease treatment: predictors of survival. Biol 
Blood Marrow Transplant 2010;16:1693-1699. 
Levine JE, Paczesny S, Mineishi S, et al. Etanercept plus methylprednisolone as initial therapy 
for acute graft-versus-host disease. Blood 2008;111:2470-2475. 
MacMillan ML, DeFor TE, Weisdorf DJ. The best endpoint for acute GVHD treatment trials. 
Blood 2010;115:5412-5417. 
MacMillan ML, Robin M, Harris AC, et al. A refined risk score for acute graft-versus-host 
disease that predicts response to initial therapy, survival, and transplant-related mortality. Biol 
Blood Marrow Transplant 2015;21:761-767. 
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Malone FR, Leisenring WM, Storer BE, et al. Prolonged anorexia and elevated plasma cytokine 
levels following myeloablative allogeneic hematopoietic cell transplant. Bone Marrow 
Transplant 2007;40:765-772. 
Martin PJ. Study design and endpoints in graft-versus-host disease. Best Pract Res Clin 
Haematol 2008;21:357-372. 
Martin PJ, Bachier CR, Klingemann HG, et al. Endpoints for clinical trials testing treatment of 
acute graft-versus-host disease: a joint statement. Biol Blood Marrow Transplant 
2009;15:777-784. 
Martin PJ, Rizzo JD, Wingard JR, et al. First- and second-line systemic treatment of acute 
graft-versus-host disease: recommendations of the American Society of Blood and Marrow 
Transplantation. Biol Blood Marrow Transplant 2012;18:1150-1163. 
Matsuda K, Yamauchi K, Tozuka M, et al. Monitoring of hematopoietic chimerism by short 
tandem repeats, and the effect of CD selection on its sensitivity. Clin Chem 2004;50:2411-2414. 
Migita K, Izumi Y, Jiuchi Y, et al. Effects of Janus kinase inhibitor tofacitinib on circulating 
serum amyloid A and interleukin-6 during treatment for rheumatoid arthritis. Clin Exp Immunol 
2013;175:208-214. 
National Cancer Institute (NCI). Common Terminology Criteria for Adverse Events (CTCAE) 
Version 4.03. 2010. http://evs.nci.nih.gov/ftp1/CTCAE/CTCAE_4.03_2010-06-
14_QuickReference_5x7.pdf. Accessed December 1, 2017. 
Niederwieser D, Baldomero H, Szer J, et al. Hematopoietic stem cell transplantation activity 
worldwide in 2012 and a SWOT analysis of the Worldwide Network for Blood and Marrow 
Transplantation Group including the global survey. Bone Marrow Transplant 2016;51:778-785. 
Oken MM, Creech RH, Tormey DC, et al. Toxicity and response criteria of the Eastern 
Cooperative Oncology Group. Am J Clin Oncol 1982;5:649-655. 
Olsson R, Remberger M, Schaffer, M, et al. Graft failure in the modern era of allogeneic 
hematopoietic SCT. Bone Marrow Transplant 2013;48:537-543.  
Pavletic SZ, Fowler DH. Are we making progress in GVHD prophylaxis and treatment? 
Hematology Am Soc Hematol Educ Program 2012;251-264. 
Pidala J, Kim J, Anasetti C. Sirolimus as primary treatment of acute graft-versus-host disease 
following allogeneic hematopoietic cell transplantation. Biol Blood Marrow Transplant 
2009;15:881-885. 
Przepiorka D, Weisdorf D, Martin P, et al. 1994 Consensus conference on acute GVHD grading. 
Bone Marrow Transplant 1995;15:825-828. 
Rocha V, Wagner JE Jr, Sobocinski KA, et al. Graft-versus-host disease in children who have 
received a cord-blood or bone marrow transplant from an HLA-identical sibling. Eurocord and 
International Bone Marrow Transplant Registry Working Committee on Alternative Donor and 
Stem Cell Sources. N Engl J Med 2000;342:1846-1854. 
Rowlings PA, Przepiorka D, Klein JP, et al. IBMTR Severity Index for grading acute 
graft-versus-host disease: retrospective comparison with Glucksberg grade. Br J Haematol 
1997;97:855-864. 
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Ruutu T, Gratwohl A, de Witte T, et al. Prophylaxis and treatment of GVHD: EMBT-ELN 
working group recommendations for a standardized practice. Bone Marrow Transplantation 
2014;49:168-173. 
Saliba RM, Couriel DR, Giralt S, et al. Prognostic value of response after upfront therapy for 
acute GVHD. Bone Marrow Transplantation 2012;47:125-131. 
Schroeder MA, Khoury HJ, Jagasia M, et al. A phase 1 trial of janus kinase (JAK) inhibition 
with INCB039110 in acute graft-versus-host disease (aGVHD). Presented at: 58th American 
Soceity of Hematology (ASH) Annual Meeting & Exposition; December 3-6, 2016; San Diego, 
CA. Abstract 390. 
Schwartz GJ, Muñoz A, Schneider MF, et al. New equations to estimate GFR in children with 
CKD. J Am Soc Nephrol 2009;20:629-637. 
Socié G, Blazar BR. Acute graft-versus-host disease: from the bench to the bedside. Blood 
2009;114:4327-4336. 
Spoerl S, Maas-Bauer K, Verbeek M, et al. Response to JAK 1/2 inhibition in patients with 
corticosteroid-refractory acute graft-versus-host disease. Poster presented at: 56th American 
Society of Hematology (ASH) Annual Meeting & Exposition; December 6-9, 2014; 
San Francisco, CA. Abstract 3934. 
Tomblyn M, Chiller T, Einsele H, et al. Guidelines for preventing infectious complications 
among hematopoietic cell transplantation recipients: a global perspective. Biol Blood Marrow 
Transplant 2009;15:1143-1238. 
University of Washington School of Pharmacy. Drug Interaction Database Program. 2002. 
http://www.druginteractioninfo.org. Accessed February 2018. 
Verstovsek S, Kantarjian H, Mesa RA, et al. Safety and efficacy of INCB018424, a JAK1 and 
JAK2 inhibitor, in myelofibrosis. N Engl J Med 2010;363:1117-1127. 
Wang Y, Jadhav PR, Lala M, Gobburu JV. Clarification on precision criteria to derive sample 
size when designing pediatric pharmacokinetic studies. J Clin Pharmacol 2012;5:1601-1606. 
Weisdorf DJ, Hurd D, Carter S, et al. Prospective grading of graft-versus-host disease after 
unrelated donor marrow transplantation: a grading algorithm versus blinded expert panel review. 
Biol Blood Marrow Transplant 2003;9:512-518. 
Zeiser R, Burchert A, Lengerke C, et al. Long-term follow-up of patients with 
corticosteroid-refractory graft-versus-host disease treated with ruxolitinib. Presented at: 58th 
American Society of Hematology (ASH) Annual Meeting & Exposition; December 3-6, 2016; 
San Diego, CA. Abstract 4561. 
Zeiser R, Lengerke C, Spoerl S, et al. High responses rates in patients treated with ruxolitinib for 
corticosteroid-refractory graft-versus-host disease: analysis including 13 transplant centers. 
Presented at: 41st Annual Meeting of the European Society for Blood and Marrow 
Transplantation (EBMT); March 22-25, 2015; Istanbul, Turkey. 
Zhang C, Huang W, Zhang P, et al. Dynamic changes in serum cytokine levels and their clinical 
significance in predicting acute GVHD. Oncotarget 2017;8:53691-53700. 
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APPENDIX A. MAGIC CRITERIA FOR STAGING AND GRADING FOR 
ACUTE GVHD 
Stage 
Skin 
(Active Erythema Only) 
Liver 
(Bilirubin) 
Upper GI 
Lower GI 
(Stool Output/Day) 
0 
No active (erythematous) 
GVHD rash 
< 2 mg/dL 
No or intermittent 
nausea, vomiting, or 
anorexia 
Adult:  < 500 mL/day or 
< 3 episodes/day. 
Child:  < 10 mL/kg per day 
or < 4 episodes/day. 
1 
Maculopapular rash 
< 25% BSA 
2-3 mg/dL 
Persistent nausea, 
vomiting, or anorexia 
Adult:  500-999 mL/day or 
3-4 episodes/day. 
Child:  10-19.9 mL/kg per 
day or 4-6 episodes/day. 
2 
Maculopapular rash 
25%-50% BSA 
3.1-6 mg/dL 
− 
Adult:  1000-1500mL/day or 
5-7 episodes/day. 
Child:  20-30 mL/kg per day 
or 7-10 episodes/day. 
3 
Maculopapular rash 
> 50% BSA 
6.1-15 mg/dL 
− 
Adult:  > 1500 mL/day or 
> 7 episodes/day. 
Child:  > 30 mL/kg per day 
or > 10 episodes/day. 
4 
Generalized erythroderma 
(> 50% BSA) plus bullous 
formation and 
desquamation > 5% BSA  
> 15 mg/dL 
− 
Severe abdominal pain with 
or without ileus or grossly 
bloody stool (regardless of 
stool volume). 
BSA = body surface area. 
Overall clinical grade (based on most severe target organ involvement): 
Grade 0:  No Stage 1-4 of any organ. 
Grade I:  Stage 1-2 skin without liver, upper GI, or lower GI involvement. 
Grade II:  Stage 3 rash and/or Stage 1 liver and/or Stage 1 upper GI and/or Stage 1 lower GI. 
Grade III:  Stage 2-3 liver and/or Stage 2-3 lower GI, with Stage 0-3 skin and/or Stage 0-1 upper GI. 
Grade IV:  Stage 4 skin, liver, or lower GI involvement, with Stage 0-1 upper GI. 
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Response Definitions 
• CR is defined as CIBMTR score of 0 for the GVHD grading in all evaluable organs.  
For a response to be scored as CR at day 28 or later, the subject must still be in CR on 
that day and have had no intervening additional therapy for an earlier progression, PR 
or no response (NR). 
• VGPR is defined as: 
− Skin:  No rash, or residual erythematous rash involving < 25% of the body 
surface, without bullae (residual faint erythema and hyperpigmentation do not 
count) 
− Liver:  Total serum bilirubin concentration < 2 mg/dL or < 25% of baseline at 
enrollment 
− Gut: 
o Tolerating food or enteral feeding 
o Predominantly formed stools 
o No overt gastrointestinal bleeding or abdominal cramping 
o No more than occasional nausea or vomiting 
• PR is defined as improvement in one or more organs involved with GVHD symptoms 
without progression in others.  For a response to be scored as PR at Day 28 or later, 
the subject must still be in PR on that day and have had no intervening additional 
therapy for an earlier progression, PR or NR. 
• Mixed response is defined as improvement in one or more organs with deterioration 
in another organ manifesting symptoms of GVHD or development of symptoms of 
GVHD in a new organ. 
• Progression of disease is defined as deterioration in at least 1 organ without any 
improvement in others. 
• NR is defined as absence of any improvement or progression as defined.  Subjects 
receiving secondary therapy (including need to re-escalate steroid dose to 
≥ 2.5 mg/kg/day of prednisone or methylprednisolone equivalent of 2 mg/kg/day), 
will be classified as nonresponders. 
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APPENDIX C. INFORMATION REGARDING EFFECTIVENESS OF 
CONTRACEPTIVE METHODS 
For subjects participating in the study (may be applicable to Cohort 1): 
For male subjects in the study: 
Male subjects should use a condom during treatment and through 90 days after the end of systemic 
exposure. If the male subject has a partner that is of child-bearing potential, the partner should also use 
contraception through 90 days after the end of relevant systemic exposure. In addition, male subjects 
must refrain from donating sperm during the study through 90 days after the end of relevant systemic 
exposure. Males who have had a vasectomy qualify as having met the requirement for a highly 
effective birth control method. 
For female subjects in the study: 
The following methods that can achieve a failure rate of less than 1% per year when used consistently 
and correctly are considered as highly effective birth control methods.  Such methods include: 
• 
Combined (estrogen and progestogen containing) hormonal contraception associated with 
inhibition of ovulationa 
− 
oral 
− 
intravaginal 
− 
transdermal 
• 
Progestogen-only hormonal contraception associated with inhibition of ovulationa 
− 
oral 
− 
injectable 
− 
implantableb 
• 
Intrauterine deviceb 
• 
Intrauterine hormone-releasing systemb 
• 
Bilateral tubal occlusionb 
• 
Vasectomized partnerbc 
• 
Sexual abstinenced 
Acceptable birth control methods that result in a failure rate of more than 1% per year include: 
• 
Progestogen-only oral hormonal contraception, where inhibition of ovulation is not the primary 
mode of action 
• 
Male or female condom with or without spermicidee 
• 
Cap, diaphragm, or sponge with spermicidee 
• 
Tubal ligation 
a Hormonal contraception may be susceptible to interaction with the investigational medicinal product, which may 
reduce the efficacy of the contraception method. 
b Contraception methods that in the context of this guidance are considered to have low user dependency. 
c Vasectomised partner is a highly effective birth control method provided that partner is the sole sexual partner of 
the WOCBP trial subject and that the vasectomised partner has received medical assessment of the surgical 
success. 
d In the context of this guidance, sexual abstinence is considered a highly effective method only if defined as 
refraining from heterosexual intercourse during the entire period of risk associated with the study treatments.  The 
reliability of sexual abstinence needs to be evaluated in relation to the duration of the clinical trial and the 
preferred and usual lifestyle of the subject. 
e A combination of male condom with either cap, diaphragm or sponge with spermicide (double barrier methods) 
are also considered acceptable, but not highly effective, birth control methods. 
Source:  Clinical Trial Facilitation Group 2014. 
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APPENDIX D. MODIFIED SCHWARTZ FORMULA 
eGFR = 0.413 × (height/serum creatinine) if height expressed in centimeters 
or 41.3 × (height/serum creatinine) if height expressed in meters
eGFR (estimated glomerular filtration rate) = mL/min/1.73 m2
Source:  Schwartz et al 2009. 
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APPENDIX E. PROTOCOL AMENDMENT SUMMARY OF CHANGES 
Document 
Date 
Amendment (Version) 1: 
20 NOV 2018 
Amendment (Version) 2: 
16 JAN 2019 
Amendment (Version) 3: 
02 JUL 2019 
Amendment 3 (02 JUL 2019) 
Overall Rationale for the Amendment:  The primary purpose of this amendment is to revise 
the toxicity monitoring and stopping boundaries.  Eligibility criteria referring to renal and liver 
function have been modified to address comments the Health Authorities.  Itacitinib clinical 
background has also been updated to align with the most recent data available. 
Additional administrative changes have also been added. 
1. Synopsis; Section 3.1, Subject Inclusion Criteria; Appendix D, Modified Schwartz 
Formula 
Description of change:  Clarification was made that the renal function should be 
assessed using the glomerular filtration rate (GFR) as estimated using modified Schwartz 
formula (Appendix D) and should be > 50 mL/min/1.73 m2 to allow the subject’s 
inclusion in the study.  This applies to all subjects to be included in the study.  
Rationale for change:  Address regulatory feedback. 
2. Synopsis; Section 3.2, Subject Exclusion Criteria 
Description of change:  Clarification that the exclusion criteria for total bilirubin at 
screening is > 1.5 × ULN and not > 2.0 × ULN to allow the subjects entering the study.  
Rationale for change:  Address regulatory feedback. 
3. Synopsis, Statistical Methods; Section 4.1, Overall Study Design; Section 9.8, 
Toxicity Monitoring 
Description of change:  Updated study progress table.  Added clarification that within 
each cohort, among the first 10 subjects enrolled in Phase 1 who are evaluable for DLT, 
if more than 3 subjects have any DLT events within the 28-day surveillance period, then 
the study will be terminated.  A cohort can be expanded and proceed to subsequent steps 
if 3 or fewer out of 10 subjects in the cohort have a DLT occurring in the 28-day 
surveillance period. 
Rationale for change:  Propose a more conservative toxicity monitoring and stopping 
boundaries, which are appropriate for a pediatric patient population. 
4. Section 1.3.2, Clinical Studies; Section 1.4.2, Clinical Experience With Janus Kinase 
Inhibitors for the Treatment of Graft-Versus-Host Disease 
Description of change:  Updated clinical background to incorporate the most current 
available clinical data on itacitinib in acute GVHD. 
Rationale for change:  Updated information. 
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5. Section 4.1.1, Phase 1; Section 5.6.2, Dose-Limiting Toxicity; Section 9.8, Toxicity 
Monitoring 
Description of change:  Indicated that study team will review safety and tolerability on a 
continual basis as well as establishing regular safety calls with investigators during 
Phase 1. 
Rationale for change:  Clarification of safety monitoring during Phase 1. 
6. Section 5.6.3, Criteria and Procedures for Dose Interruptions and Modifications of 
Itacitinib (Table 3:  Guidelines for Interruption and Restarting of Itacitinib) 
Description of change:  Clarification that the criterion for itacitinib dose interruption due 
to elevated AST or ALT values applies for all study subjects and not only for those 
whose AST/ALT values are normal at baseline (restriction removed). 
Rationale for change:  Clarification of guidelines for dose modification. 
7. Section 6, Study Assessments (Table 5:  Schedule of Assessments) 
Description of change:  Specified Day 1 assessment of 12-lead ECG, aGVHD grading 
and response, chimerism assessment/graft failure
 
Rationale for change:  Clarification on screening assessments. 
 
 
 
 
 
 
9. Section 9.2, Selection of Sample Size 
Description of change:  Clarification was added that up to 30 subjects may be enrolled 
in each cohort, including 10 subjects included in the Phase 1 for each cohort.  
Rationale for change:  Clarification of the total number of subjects to be enrolled in 
each cohort. 
10. Incorporation of administrative changes.  Other minor, administrative changes have 
been incorporated throughout the Protocol and are noted in the redline version of the 
amendment. 
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Amendment 2 (16 JAN 2019) 
Overall Rationale for the Amendment:  The primary purpose of this amendment is to add 
recommendations for concomitant administration of potent CYP3A4 inhibitors based on 
emergent data from the INCB 39110-108 study.  Additional clarification on study procedures 
and other updates have also been included.  
1. Synopsis 
Description of change:  Added Principal Coordinating Investigator information.  
Rationale for change:  Update. 
2. Synopsis; Section 2, Study Objectives and Endpoints (Table 1); Section 9.4.2, 
Secondary Analyses 
Description of change:  Reworded primary and secondary endpoints and updated the 
definitions of DOR, FFS, and overall survival.  
Rationale for change:  To improve clarity. 
3. Synopsis; Section 3.1, Subject Inclusion Criteria 
Description of change:  Reworded Criterion 2 so that subjects with any degree of HLA 
matching may be included.  Subjects who have undergone 1 allo-HSCT from any donor 
HLA type (related or unrelated donor with any degree of HLA matching) may also be 
included. 
Rationale for change:  Clarification.  
4. Synopsis; Section 3.2, Subject Exclusion Criteria; Section 7.5.6.4, Hepatitis 
Screening 
Description of change:  Reworded Criterion 6 so that subjects with active HBV or HCV 
infection that requires treatment or who are at risk for HBV reactivation are not eligible 
for this study. 
Rationale for change:  There is a risk for reactivation in subjects who would require 
frequent viral DNA monitoring.  Because hepatitis positivity is extremely rare in the 
pediatric population and the blood volume amounts that can be withdrawn in this 
population are limited, pediatric experts advised to exclude those patients from the study.  
5. Synopsis; Section 3.2, Subject Exclusion Criteria 
Description of change:  Refined language for Criterion 9a to define eligibility based on 
liver function tests. 
Rationale for change:  Clarification. 
6. Synopsis; Section 5.6.2, Dose-Limiting Toxicity 
Description of change:  Clarified that platelet recovery is platelets ≥ 20 × 109/L in the 
absence of platelet transfusion in the 7 days preceding the platelet recovery date. 
Rationale for change:  Clarification. 
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7. Synopsis; Section 5.6.2, Dose-Limiting Toxicity 
Description of change:  Clarified that transient (≤ 72 hours) abnormal laboratory values 
without associated clinically significant signs and symptoms and not leading to 
hospitalization will not be considered as DLTs. 
Rationale for change:  Clarification. 
8. Section 4.2, Measures Taken to Avoid Bias; Section 8.7, Data Monitoring 
Committee; Section 9.9, Analyses for the Data Monitoring Committee 
Description of change:  Clarified that the study involves an independent DMC and 
referred to the DMC charter. 
Rationale for change:  For consistency and clarity. 
9. Section 1.5, Potential Risks and Benefits of the Treatment Regimen; Section 5.7.5, 
Restricted Medications  
Description of change:  Added emerging data from Study INCB 39110-108 and updated 
recommendations for concomitant administration of potent CYP3A4 inhibitors, including 
the 28-day surveillance period. 
Rationale for change:  To reflect the emerging data added in Section 1.5. 
10. Section 4.4, Duration of Treatment and Subject Participation 
Description of change:  Clarified that safety follow-up period will last 30 to 35 days, 
and the survival follow-up period will last until death or study withdrawal.   
Rationale for change:  For consistency and clarity.  
11. Section 5.2.4, Instruction to Subjects for Handling Itacitinib; Section 7.7.1, Blood 
Sample Collection 
Description of change:  Updated to specify that food needs to be withheld for 2 hours 
before dosing instead of 8 hours. 
Rationale for change:  The fasting time window was decreased based on the PK data 
obtained in the adults; the window is deemed sufficient, and this change will facilitate the 
participation of pediatric population in his study. 
12. Section 5.6.3, Criteria and Procedures for Dose Interruptions and Modifications of 
Itacitinib (Table 2, Guidelines for Interruption and Restarting of Itacitinib) 
Description of change:  Updated to specify that itacitinib may be resumed at a reduced 
dose if platelet count returns to within 75% of the baseline value, and modified the 
language for dose interruptions and modifications in case of bilirubin elevations. 
Rationale for change:  Clarification and to avoid ambiguity. 
13. Section 5.6.4, Tapering of Itacitinib; Section 6.4, Re-Treatment 
Description of change:  Clarified requirements for additional tapering of itacitinib, and 
clarified requirements and procedures for subjects who enter the re-treatment period.  
Rationale for change:  Procedural and editorial clarification. 
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14. Section 5.7.6, Prohibited Medications 
Description of change:  Updated to clarify that concurrent anticancer therapy intended to 
treat malignancy relapse or recurrence is prohibited, and that maintenance therapy with 
tyrosine kinase inhibitors for high-risk Philadelphia chromosome−positive leukemia and 
FLT3 inhibitors for FLT3+ acute myeloid leukemia may be used with sponsor approval.  
Rationale for change:  To clarify concomitant medication used for the treatment of 
underlying malignancy. 
15. Section 5.7.6, Prohibited Medications 
Description of change:  Added that concomitant use of targeted therapies with 
anti-GVHD activity, including but not limited to tumor necrosis factor alpha inhibitors 
and IL-6 receptor inhibitors, is prohibited.  
Rationale for change:  To clarify prohibited concomitant medication. 
16. Section 6, Study Assessments (Table 4, Schedule of Assessments) 
Description of change:  PTLD assessment was updated to include the EOT, 
re-treatment, and safety and GVHD follow-up visits. 
Rationale for change:  To assess PTLD for a longer period of time (through the 
follow-up visits). 
17. Section 6, Study Assessments (Table 4, Schedule of Assessments) 
Description of change:  Height and weight measurement was moved from the survival 
to post-treatment GVHD follow-up period, and steroid dose monitoring was added to 
re-treatment.  
Rationale for change:  Typographical error correction. 
 
 
 
 
 
 
 
20. Section 6, Study Assessments (Table 4, Schedule of Assessments; Table 5, 
Laboratory Assessments) 
Description of change:  Added that a ± 7-day window is permitted for EOT visit. 
Rationale for change:  Clarification. 
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21. Section 6, Study Assessments (Table 5, Laboratory Assessments) 
Description of change:  Added that chemistry is needed at Day 180 and specified that  
hematology and chemistry at Days 100 and 180 does not need to be repeated if performed 
within 7 days.  
Rationale for change:  Clarification. 
22. Section 6, Study Assessments (Table 4, Schedule of Assessments); Section 7.6.1, 
Acute Graft-Versus Host Disease Staging and Grading; Section 7.6.2, Chronic 
Graft-Versus-Host Disease Assessment 
Description of change:  It is specified that aGVHD staging and grading will be 
performed during GVHD follow-up visit, and that cGVHD assessment will be performed 
during safety and GVHD follow-up visits. 
Rationale for change:  Clarification to address a frequently asked question in the acute 
GVHD program. 
23. Section 6, Study Assessments (Table 4, Schedule of Assessments; Table 5, 
Laboratory Assessments); Section 6.4 Re-Treatment; Section 6.5.2, Post-Treatment 
GVHD Follow-Up 
Description of change:  A post-treatment GVHD follow-up visit was added to highlight 
requirements for assessing GVHD status for subjects who end treatment because of 
reasons other than GVHD progression. 
Rationale for change:  Clarification to address a frequently asked question in the acute 
GVHD program. 
24. Section 6, Study Assessments (Table 4, Schedule of Assessments); Section 6.5.3, 
Survival Follow-Up 
Description of change:  Revised to indicate which subjects will be followed for survival 
and that new GVHD therapies and relapse of underlying hematology disease will be 
assessed in addition to survival status. 
Rationale for change:  Clarification. 
25. Section 6, Study Assessments (Table 4, Schedule of Assessments); Section 7.6.5, 
Relapse/Recurrence of Underlying Hematologic Disease 
Description of change:  Added underlying disease relapse assessment. 
Rationale for change:  To clarify assessment of the underlying disease relapse. 
26. Section 6, Study Assessments (Table 5, Laboratory Assessments) 
Description of change: Specified that serum correlative samples are to be drawn for 
Cohorts 1 and 2 only for both Phase 1 and Phase 2. 
Rationale for change:  To clarify. 
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27. Section 6, Study Assessments (Table 5, Laboratory Assessments; Table 6, Clinical 
Laboratory Analytes); Section 7.5.6.6, Adenovirus, EBV, and CMV Screening 
Description of change:  Added requirement for adenovirus, EBV, and CMV viral load 
assessment. 
Rationale for change:  To ensure safety of the subjects and gather additional safety 
information. 
28. Section 6, Study Assessments (Table 4, Schedule of Assessments); Section 7.6.3, 
Graft Failure and Donor Chimerism 
Description of change:  Updated to include information on graft failure. 
Rationale for change:  To ensure consistency between the study assessments table and 
Section 7.6.3 of the Protocol. 
29. Section 6, Study Assessments (Table 5, Laboratory Assessments) 
Description of change:  Liver testing assessment for GVHD follow-up period was 
specified.   
Rationale for change:  To clarify. 
 
 
 
 
31. Section 10.4, Data Privacy and Confidentiality of Study Records 
Description of change:  Revision to language pertaining to the protection of personal 
data. 
Rationale for change:  To comply with the General Data Protection Regulation 
2016/679. 
32. Incorporation of administrative changes.  Other minor, administrative changes have 
been incorporated throughout the Protocol and are noted in the redline version of the 
amendment. 
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Amendment 1 (20 NOV 2018) 
Overall Rationale for the Amendment: 
The primary purpose of this amendment is to address regulatory feedback from Voluntary 
Harmonisation Procedure. 
1. Synopsis; Section 3.1, Subject Inclusion Criteria 
Description of change:  Definition of fertile males was added (Inclusion Criterion 6c). 
Rationale for change:  To address a request from EU regulatory competent authorities. 
2. Synopsis; Section 3.2, Subject Exclusion Criteria 
Description of change:  It was clarified that subjects receiving any corticosteroid therapy 
for indications other than GVHD at doses > 1 mg/kg per day of methylprednisolone (or 
equivalent) within 7 days of the first study drug administration are excluded (Exclusion 
Criterion 8). 
Rationale for change:  Clarification. 
3. Section 3.1, Subject Inclusion Criteria; Appendix C, Information Regarding 
Effectiveness of Contraceptive Methods 
Description of change:  List of highly effective methods of contraception for females of 
childbearing and for males of fathering potential and their partner was added. 
Rationale for change:  To address a request from EU regulatory competent authorities. 
4. Synopsis; Section 9.8, Toxicity Monitoring 
Description of change:  It was added that if the boundary is reached for a cohort, the 
cohort is put on hold until further investigation is conducted by the DMC and a decision 
is made. 
Rationale for change:  To address a request from EU regulatory competent authorities. 
5. Section 4.3.2, Replacement of Subjects; Section 4.4, Duration of Treatment and 
Subject Participation 
Description of change:  The requirement for hospitalization of pediatric subjects during 
the first 28 days of study treatment was removed. 
Rationale for change:  In this study, and as per current clinical practice, the subjects are 
not required to be hospitalized.  This requirement was mistakenly incorporated in the 
original Protocol and would lead to an unnecessary burden for children. 
6. Section 5.2.1, Description and Administration 
Description of change:  Implementations of dose increases/decreases have been clarified 
with respect to approval of a substantial amendment by the Competent Authorities. 
Rationale for change:  To address request from EU regulatory competent authorities. 
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7. Section 6, Study Assessments (Table 4, Schedule of Assessments; Table 5, 
Laboratory Assessments) 
Description of change:  It is clarified that re-treatment assessments occur every 28 days 
with a ± 3 days evaluation window.  
Rationale for change:  The ± 3 days evaluation window was added to facilitate 
assessment scheduling during the re-treatment phase.  This is in line with the footnote “a” 
in the same section that clarifies that a ± 3-day window is permitted to facilitate 
scheduling during the treatment phase. 
8. Section 6, Study Assessments  
Description of change:  Specific language was incorporated to describe measures to 
reduce pain and discomfort in accordance with “Ethical considerations for clinical trials 
on medicinal products conducted with the paediatric population” (18 SEP 2017).  It was 
clarified that the degree of burden and risk threshold will be constantly monitored by the 
investigators. 
Rationale for change:  To address a request from EU regulatory competent authorities.  
9. Incorporation of administrative changes.  Other minor, administrative changes have 
been incorporated throughout the Protocol and are noted in the redline version of the 
amendment. 
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Protocol INCB 39110-120 
28 OCT 2019 
Administrative Change 1 
 
INCB 39110-120 
Protocol Administrative Change 1 
Summary of Changes and Rationale 
Protocol Title: 
An Open-Label, Single-Arm, Phase 1/2 Study 
Evaluating the Safety and Efficacy of Itacitinib in 
Combination With Corticosteroids for the Treatment 
of Steroid-Naive Acute Graft-Versus-Host Disease in 
Pediatric Subjects 
Protocol Number: 
INCB 39110-120 
Protocol Amendment 3 Date: 
02 JUL 2019 
Date of Administrative Change 1: 
28 OCT 2019 
The primary purpose of this administrative change letter is to add ketoconazole to the list of 
potent CYP3A4 inhibitors that should lead to a dose reduction of itacitinib and to include 
2 examples of other CYP3A4 inhibitors for which no itacitinib dose adjustment is recommended. 
This is not a Protocol amendment; these changes will be incorporated into a future amended 
version of the Protocol at such time that an amendment is required. 
1. Section 1.5, Potential Risks and Benefits of the Treatment Regimen; Section 5.7.5, 
Restricted Medications 
Description of change:  Ketoconazole should be added as a potent CYP3A4 inhibitor 
and as such, dose reduction of itacitinib to half of the initial dose is recommended if the 
study subject receives ketoconazole, the same way as with itraconazole, voriconazole, 
mibefradil, and clarithromycin.  In addition, posaconazole and fluconazole should be 
added as examples of other CYP3A4 inhibitors for which no itacitinib dose adjustment is 
recommended in the event of concomitant administration. 
Rationale for change:  To address the FDA request. 
This administrative change does not result in any modification of the schedule of assessments.  
CONFIDENTIAL 
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