---
license: apache-2.0
language:
- en



tags:
- pubmed
- medical
- medicine
- NIH
- science
pretty_name: dataclysm-arxiv
size_categories:
- 10M<n<100M
---

# DATACLYSM PATCH 0.0.4: PUBMED
## USE THE NOTEBOOK TO GET STARTED!
https://github.com/somewheresystems/dataclysm

# somewheresystems/dataclysm-pubmed

This dataset comprises of 35.7 million PubMed metadata entries including title and some (~69% with) abstracts, with two new columns added: title-embeddings and abstract-embeddings. These additional columns were generated using the bge-small-en-v1.5 embeddings model. The dataset was sourced from the PubMed Baseline as of December 12, 2023. https://ftp.ncbi.nlm.nih.gov/pubmed/baseline/ 

# Embeddings Model

We used https://huggingface.co/BAAI/bge-small-en-v1.5 to embed the `title` and `abstract` fields. 

## Contact

Please contact hi@dataclysm.xyz for inquiries.