semvec/pypi-packages huggingface dataset:
jsonstreamer 1.3.6
Provides a SAX-like push parser for JSON based on YAJL
License: MIT

jsonstreamer provides a SAX-like push parser via the JSONStreamer class and a 'object' parser via the ObjectStreamer class which emits top level entities in any JSON object. Based on the fast c libary 'yajl'. Great for parsing streaming json over a network as it comes in or json objects that are too large to hold in memory altogether.
genotype_network 0.1.6
A package for constructing and analyzing protein genotype                  networks in Python.
License: MIT
Keywords: proteins,networks,bioinformatics

# genotype-network

Genotype Networks were defined in a paper by Wagner (2014)[http://rspb.royalsocietypublishing.org/content/281/1786/20132763]. A protein genotype network is defined as such: a graph, in which nodes are unique protein sequences, and edges connect nodes that differ by a single amino acid substitution, insertion or deletion.

This Python package is written to provide Pythonistas a way to construct and analyze protein genotype networks. Everything here is currently experimental, we would welcome pull requests and suggestions on how to make it more useful!

Documentation is being developed. Please stay tuned!

# Contributor List

- @Chevelant (Kyle Yuan, MIT)
ptemcee 1.0.0
Parallel-tempered emcee.
License: MIT

ptemcee
=======

.. image:: http://img.shields.io/travis/willvousden/ptemcee/master.svg?style=flat
        :target: http://travis-ci.org/willvousden/ptemcee
.. image:: http://img.shields.io/badge/license-MIT-blue.svg?style=flat
        :target: https://github.com/willvousden/ptemcee/blob/master/LICENSE
.. image:: http://img.shields.io/badge/arXiv-1501.05823-orange.svg?style=flat
        :target: http://arxiv.org/abs/1501.05823

ptemcee /'tɛmsiː/ (noun):
    `Adaptive parallel tempering <http://arxiv.org/abs/1501.05823>`_ meets |emcee|_.

*ptemcee*, pronounced "tem-cee", is fork of Daniel Foreman-Mackey's wonderful |emcee|_ to implement
parallel tempering more robustly.

If you're trying to characterise awkward, multi-model probability distributions, then *ptemcee* is
your friend.


Documentation
-------------

... will be here soon.


Attribution
-----------

Please cite `Vousden, Farr, Mandel (2015) <http://arxiv.org/abs/1501.05823>`_ and `Foreman-Mackey,
Hogg, Lang & Goodman (2012) <http://arxiv.org/abs/1202.3665>`_ if you find this code useful in your
research.


License
-------

*ptemcee* is free software distributed under the MIT License; see the `LICENSE
<https://github.com/willvousden/ptemcee/blob/master/LICENSE>`_ file for details.

.. |emcee| replace:: *emcee*
.. _emcee: https://github.com/dfm/emcee
jicimagelib 0.3.4
Python package designed to make it easy to work with microscopy images.
License: MIT
Keywords: microscopy,image analysis

JIC Image Library
=================

.. image:: https://badge.fury.io/py/jicimagelib.svg
   :target: http://badge.fury.io/py/jicimagelib
   :alt: PyPi package

**This Python package is no longer under active development!**

It has been superseded by: https://github.com/JIC-CSB/jicbioimage