semvec/pypi-packages huggingface dataset:
vonMises 1.0.1
Package for vonMises distribution
License: MIT

################### vonMises Package ########################
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##					  Created by:						   ##
##			Vedant Mehta (vedantmehta08@gmail.com)         ##
##		 Kanchan Satpute (kanchansatpute09@gmail.com)      ##
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#############################################################

This package contains the following functions:
1. rvonmises - Generate random deviates from vonMises distribution
2. dvonmises - Computes probability density on the basis of vonMisesâ€™ probability density function
3. pvonmises - Computes cumulative probability on the basis vonMisesâ€™ cumulative distribution
4. qvonmises - Generates quantiles i.e., basically the inverse of vonMises cumulative distribution function
dnds 2.1
Calculate dN/dS ratio precisely (Ka/Ks) using a codon-by-codon counting method.
License: MIT

dN/dS Calculator
================

.. image:: https://travis-ci.org/adelq/dnds.svg?branch=master
   :target: https://travis-ci.org/adelq/dnds

.. image:: https://img.shields.io/pypi/v/dnds.svg?maxAge=2592000?style=plastic
    :target: https://pypi.python.org/pypi/dnds

Calculate dN/dS ratio precisely (Ka/Ks) using a codon-by-codon counting
method. Also calculates the pN/pS ratio precisely (previously referred to as
dN/dS).

Usage
-----

.. code:: python

    >>> sequence_1 = "ATGCTTTTGAAATCG"
    >>> sequence_2 = "ATGCGTTCGAAGTCG"
    >>> pnps(sequence_1, sequence2)
    Fraction(38, 71)
    >>> round(float(pnps(sequence_1, sequence2)), 3)
    0.535
    >>> round(dnds(sequence_1, sequence_2), 3)
    0.467