semvec/pypi-packages huggingface dataset:
rfc3161 1.0.7
Python implementation of the RFC3161 specification, using pyasn1
License: MIT

rfc3161
=======

A simple client library for cryptographic timestamping service implementing the
protocol from RFC3161.

    >>> import rfc3161
    >>> certificate = file('data/certum_certificate.crt').read()
    >>> rt = rfc3161.RemoteTimestamper('http://time.certum.pl', certificate=certificate)
    >>> rt.timestamp(data='John Doe')
    ('...', '')
    >>> rt.check(_, data='John Doe')
    (True, '')
    >>> rfc3161.get_timestamp(tst)
    datetime.datetime(2014, 4, 25, 9, 34, 16)

Authors
=======

Benjamin Dauvergne <bdauvergne@entrouvert.com>
Michael Gebetsroither <michael@mgeb.org>

Changelog
=========

1.0.7
-----

- use dateutil to parse genTime
- fix bad instantiation of UTF8String in PKIFreeText
- use tox and py.test
pymip 0.2.0
Provides a Python API to manipulate MIP
License: MIT
Keywords: pymip development

# PyMIP [![PyPI version][fury-image]][fury-url] [![Build Status][travis-image]][travis-url]
Provides a Python API to manipulate the [MIP][mip] analysis pipeline: setup, starting, monitoring, and parsing output.


## Features

* TODO

### Archive analysis
After a case has been solved or abandoned it is necessary to wrap up the analysis and archive the results. Pymip will handle this task by bundling the most vital assets from the output and deleting the rest.

Assets that are kept:

- CRAM file as a source of the raw (aligned) reads
- BCF file as a source of all (unannotated) variants
- QC metrics as a source for quality metrics

Pymip will not touch any of the files under "exomes/genomes" only "analysis". Physically the files will be collected in a folder under "exomes/genomes" names "archive". The script will also update the `AnalysisRunStatus` in the QC sample info file to `Archived`.


## Install for development

```bash
$ pip install --editable .
```


## Contributing
Anyone can help make this project better - read [CONTRIBUTING](CONTRIBUTING.md) to get started!


## License
MIT. See the [LICENSE](LICENSE) file for more details.


[fury-url]: http://badge.fury.io/py/pymip
[fury-image]: https://badge.fury.io/py/pymip.png

[travis-url]: https://travis-ci.org/Clinical-Genomics/pymip
[travis-image]: https://img.shields.io/travis/Clinical-Genomics/pymip.svg?style=flat

[mip]: http://mip-api.readthedocs.org/en/latest/