semvec/pypi-packages huggingface dataset:
optimModels 0.0.16
optimModels - strain optimization
License: Apache License Version 2.0
Keywords: strain design

optimModels
============

The Python framework under development will allow the strain design of single and microbial community cultures.
The main focus is to provide support for different modeling approaches.


* Simulation: allows to simulate different kinetic metabolic models considering different phenotypes.
For the kinetic models simulation, we use the Odespy framework, which offers a unified interface to a large collection of software for solving systems of ordinary differential equations (ODEs).

* Optimization: perform the optimization using evolutionary computation. The inspyred framework is used for creating biologically-inspired computational intelligence algorithms in Python, including evolutionary computation.


### Documentation

For documentation and API please check: http://optimModels.readthedocs.io/

### Instalation

```
pip install optimModels
```

### Credits and License
Developed at:
* Centre of Biological Engineering, University of Minho (2017)

Released under an Apache License.