semvec/pypi-packages huggingface dataset:
pathflowai 0.1.1
A modular approach for preprocessing and deep learning on histopathology images.
License: MIT

<h1 align="center">Welcome to PathFlowAI ��</h1>
<p>
  <img alt="Version" src="https://img.shields.io/badge/version-0.1-blue.svg?cacheSeconds=2592000" />
  <a href="https://jlevy44.github.io/PathFlowAI/">
    <img alt="Documentation" src="https://img.shields.io/badge/documentation-yes-brightgreen.svg" target="_blank" />
  </a>
</p>

> A Convenient High-Throughput Workflow for Preprocessing, Deep Learning Analytics and Interpretation in Digital Pathology

### �� [Homepage](https://github.com/jlevy44/PathFlowAI)

NOTE: MedRxiv manuscript and set-up wiki will be posted on this repository shortly! Stay tuned!

## Install

First, install [openslide](https://openslide.org/download/).

```sh
pip install pathflowai
```

## Usage

```sh
pathflowai-preprocess -h
pathflowai-train_model -h
pathflowai-monitor -h
pathflowai-visualize -h
```

See [Wiki](https://github.com/jlevy44/PathFlowAI/wiki) for more information on setting up and running the workflow.

## Author

�� **Joshua Levy**

* Github: [@jlevy44](https://github.com/jlevy44)

## �� Contributing

Contributions, issues and feature requests are welcome!<br />Feel free to check [issues page](https://github.com/jlevy44/PathFlowAI/issues).

![1](https://user-images.githubusercontent.com/19698023/62230963-0199d780-b391-11e9-96eb-ac9b86686723.jpeg)
![2](https://user-images.githubusercontent.com/19698023/62231545-41ad8a00-b392-11e9-8d47-f9f83f4b764a.jpeg)
![3](https://user-images.githubusercontent.com/19698023/62231546-41ad8a00-b392-11e9-9b16-ea3b2b92bf3f.jpeg)
![4](https://user-images.githubusercontent.com/19698023/62230966-02326e00-b391-11e9-989c-155ff0a9be67.jpeg)