semvec/pypi-packages huggingface dataset:
bbcu.ngs-snakemake 1.0.68
Snakemake pipeline for Mars-seq and RNA-seq.

Python version
--------------

This project is currently using Python 2.7

Installation
------------

It is recommended to use **virtualenv** to create a clean python environment.

To install ngs-snakemake, use **pip**:

    pip install bbcu.ngs-snakemake

Testing
-------
To run unit tests, use:

    nosetests

Or:

    tox

This suite includes both unit and more time-consuming integration tests


Execution
---------

The main scripts shipped with this project is **ngs-snakemake/*snakefile.txt**.
Instructions to running can be found here:
https://bbcunit.atlassian.net/wiki/pages/viewpage.action?pageId=49053706