semvec/pypi-packages huggingface dataset:
padmet-utils 0.0.9
Modules to manage, explore and connect metabolic networks using Padmet and SBML formats

author: meziane aite (meziane.aite@inria.fr)

## Description

The main concept underlying padmet-utils is to provide solutions that ensure the consistency, the internal standardization and the reconciliation of the information used within any workflow that combines several tools involving metabolic networks reconstruction or analysis. The PADMet package is at the core of the AuReMe workflow, dedicated to the primary reconstruction of genome-scale metabolic networks from raw data. It allows the study of organisms for which few experimental data are available. Its main feature is to undergo the reconstruction of the metabolic network by combining several heterogeneous knowledge and data sources, including the information reported by several scaffold metabolic networks for cousin species.

## Documentation

https://padmet-utils.readthedocs.io/en/latest/
atuproot 0.3.0
AlphaTwirl + uproot = FAST analysis code

# atuproot

[alphatwirl](https://github.com/alphatwirl/alphatwirl) interface to process and read [ROOT](https://root.cern.ch/) `TTrees` with [uproot](https://github.com/scikit-hep/uproot).

## How to use

Can be installed via pip
```
pip install atuproot
```

or for developing:
```
git clone git@github.com:shane-breeze/atuproot.git
cd atuproot
python setup.py install
```

## Binder tutorial

An example of how to use this is shown in a binder tutorial linked below.

[![Binder](https://mybinder.org/badge.svg)](https://mybinder.org/v2/gh/shane-breeze/atuproot/master?filepath=binder%2Ftutorial.ipynb)
mocker-client 0.0.5dev1
client for http mock server https://github.com/vilus/mocker

===========================
client for http mock server
===========================

.. image:: https://badge.fury.io/py/mocker-client.svg
    :target: https://badge.fury.io/py/mocker-client

.. image:: https://codecov.io/gh/vilus/mocker_client/branch/master/graph/badge.svg
     :target: https://codecov.io/gh/vilus/mocker_client

.. image:: https://travis-ci.org/vilus/mocker_client.svg?branch=master
       :target: https://travis-ci.org/vilus/mocker_client

python client for create/delete mocks on mock server


Example
--------
.. code-block:: bash

    pip install mocker-client


.. code-block:: python

    from mocker_client import MockServer, Mock


    mock = MockServer(url='http://127.0.0.1:8080/mocker_api/mocks/').create_mock(
        {'name': 'hi', 'route': '/q', 'method': 'get', 'responses': 'Hi_1'}
    )
    # actions
    mock.delete()
    #
    help(MockServer.create_mock)
    create_mock(self, data)
        :param data: dict with keys:
          'name' - optional, '' by default
          'route' - for example '/some_path'
          'method' - a http method like GET, POST, PUT, etc
          'response_type' - optional, choice from ['single', 'sequence', 'cycle'], 'single' by default
          'responses' - list of dicts with keys (or just dict if response_type is single):
            'body' - response body
            'return_code' - http status code, like 200
            'headers' - dict with http headers
        :returns Mock object
    #
    help(MockServer.create_mocks)
    create_mocks(self, list_data)
        :param list_data: list of dicts with keys:
          'name' - optional, '' by default
          'route' - for example '/some_path'
          'method' - a http method like GET, POST, PUT, etc
          'response_type' - optional, choice from ['single', 'sequence', 'cycle'], 'single' by default
          'responses' - list of dicts with keys (or just dict if response_type is single):
            'body' - response body
            'return_code' - http status code, like 200
            'headers' - dict with http headers
        :returns list of Mock objects
    #
    help(Mock.delete)
    delete(self)
        delete mock on server and return its info - {is_expired: bool}