semvec/pypi-packages huggingface dataset:
pmsvv 0.0.2
A Python package for estimating Mendelian sampling-related quantities
License: MIT
Keywords: Mendelian sampling,variance,covariance,similarity,selection,haplotype diversity

# PyMSQ: documentation

PyMSQ is a python package for estimating Mendelian sampling-related quantities. PyMSQ is composed of one module [`msq`](docs/docs_msq.md) for simplicity. 

Include the following code in your python file to use its functions:

`from PyMSQ import msq`

PyMSQ can be installed using `pip` with the command

`pip install PyMSQ`

This documentation describes the main functions of the PyMSQ package:
* Derivation of population-specific covariance matrices reflecting within-family linkage disequilibrium
* Estimation of Mendelian sampling variance for traits and aggregate genotype for multiple traits, as well as their covariances
* Derivation of similarity matrices based on Mendelian sampling values between individuals
* Estimation of selection criteria for genetic evaluation of plants and animals

A tutorial on how to use PyMSQ's functions can be found [`here`](docs/Illustration of PyMSQ functions.md).

Change Log
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0.0.2 (30.07.2021)
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-First release
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