semvec/pypi-packages huggingface dataset:
dinuq 1.2.0
The Dinucleotide Quantification Python package
License: MIT
Requires Python: ~=3.6
Keywords: bioinformatics dinucleotides viruses

DinuQ
=====

The DinuQ (Dinucleotide Quantification) Python3 package provides a range of metrics 
for quantifying nucleotide, dinucleotide and synonymous codon representation in genetic 
sequences. These include the recently developed corrected Synonymous Dinucleotide Usage 
(SDUc) and corrected Relative Synonymous Dinucleotide Usage (RSDUc).


*Current version: v.1.2.0*

<br>

## [📃 Installation Instructions & Documentation 📃](https://spyros-lytras.github.io/dinuq/)

<br>

## [📊 Visualise Results 📊](https://observablehq.com/@spyros-lytras/dinuq-viz)

<br>

## Citations: 
- *[Lytras, S.; Hughes, J. (2020) Synonymous Dinucleotide Usage: A Codon-Aware Metric for Quantifying Dinucleotide Representation in Viruses. Viruses, 12:462.](https://doi.org/10.3390/v12040462)*
- *[MacLean, O.<sup>#</sup>; Lytras, S.<sup>#</sup>; Weaver, S.; Singer, J.B.; Boni, M. F.; Lemey, P.; Kosakovsky Pond, S.L.; Robertson, D.L. (2021) Natural selection in the evolution of SARS-CoV-2 in bats created a generalist virus and highly capable human pathogen. PLoS Biol, 19(3):e3001115.](https://doi.org/10.1371/journal.pbio.3001115)*
pynoo 2.0.0a1
Easily create new projects.
License: MIT
Requires Python: >=3.8,<4.0

# noo

Easily create new projects.

![Lint](https://github.com/py-noo/noo/actions/workflows/black.yml/badge.svg)

## Installation

```sh
pip install pynoo
```

or install from github

```sh
pip install git+https://github.com/py-noo/noo
```

## Contributing

See [contributing](./.github/CONTRIBUTING.md).

## Basic Usage

```sh
noo clone <name> <ref> - Clone a new project.
noo more <ref> - Modify the current project with a noofile.
```

## Documentation

The project documentation can be found on [our site](https://nooproject.dev).

For additional help you may find it useful to join our [Discord server](https://discord.gg/zbMBkC3849).