semvec/pypi-packages huggingface dataset:
endaq-plot 1.1.0
A comprehensive, user-centric Python API for working with enDAQ data and devices
License: MIT
Keywords: ebml binary ide mide endaq

# endaq-plot - Painless Plotting Of Sensor Data

endaq-plot is a package comprising a collection of plotting utilities for sensor data analysis. It leverages Plotly in order to produce interactive plots, and makes creating powerful visualizations simple and easy for those new to Python.

endaq-plot is a sub-package of the larger enDAQ ecosystem. See [the endaq package](https://github.com/MideTechnology/endaq-python) for more details.

## Installation

endaq-plot is available on PYPI via `pip`:

    pip install endaq-plot

For the most recent features that are still under development, you can also use `pip` to install endaq-plot directly from GitHub:

    pip install git+https://github.com/MideTechnology/endaq-python-plot.git@development

## Usage Examples

For these examples we assume there is a Pandas DataFrame named `df` which has it's index as time stamps and it's one column being sensor values (e.g. x-axis accleration, or pressure).   It also assumes there is a Pandas DataFrame `attribute_df` which contains all the attribute data about various data files.  More information can be found about how to get this data from enDAQ IDE files in the [endaq-cloud package](https://github.com/MideTechnology/endaq-python-cloud).

```python
from endaq.plot import octave_spectrogram, multi_file_plot_attributes, octave_psd_bar_plot
from endaq.plot.utilities import set_theme
```

### Setting The Aesthetic Theme

```python
set_theme(theme='endaq')
```

### Creating Spectrograms With Octave Spaced Frequencies

```python
freqs, bins, Pxx, fig = octave_spectrogram(df, window=.15)
fig.show()
```

![Spectrogram With Octave Spaced Frequencies](https://i.imgur.com/929aszu.png)

### Creating PSD Bar Plots With Octave Spaced Frequencies

```python
fig = octave_psd_bar_plot(df, yaxis_title="Magnitude")
fig.show()
```

![PSD Bar Plot With Octave Spaced Frequencies](https://i.imgur.com/ueqcVTQ.png)

### Plot Attributes In Figure With Subplots

```Python
fig = multi_file_plot_attributes(attribute_df)
fig.show()
```

![Attributes Plotted As Subplots](https://i.imgur.com/5Yy4DN7.png)

## Other Links
- the endaq package - https://github.com/MideTechnology/endaq-python
- the enDAQ homepage - https://endaq.com/
bio2bel 0.4.2
A framework for converting biological data sources to BEL
License: MIT
Requires Python: >=3.7
Keywords: Biological Expression Language,BEL,Domain Specific Language,DSL,Systems Biology,Networks Biology

Bio2BEL |build| |coverage| |docs| |zenodo|
==========================================
Bio2BEL is a project aimed at bringing biological databases and other structured knowledge sources in a wide variety
of schemata into the unified framework of the
`Biological Expression Language <https://biological-expression-language.github.io/>`_ [1]_.

Two important places to look:

- `How to make a Bio2BEL Repository <http://bio2bel.readthedocs.io/en/latest/tutorial.html>`_
- `How to use the CLI <http://bio2bel.readthedocs.io/en/latest/cli.html>`_

Installation |pypi_version| |python_versions| |pypi_license|
------------------------------------------------------------
Download the latest stable code from `PyPI <https://pypi.org/project/bio2bel>`_ with:

.. code-block:: sh

   $ python -m pip install bio2bel

or get the latest from GitHub with:

.. code-block:: sh

   $ git clone https://github.com/bio2bel/bio2bel.git
   $ cd bio2bel
   $ python -m pip install -e .

or check the `installation instructions <http://bio2bel.readthedocs.io/en/latest/#installation>`_.

Citation
--------
If you find Bio2BEL useful for your work, please consider citing:

.. [1] Hoyt, C. T., *et al.* (2019). `Integration of Structured Biological Data Sources using Biological Expression Language
       <https://doi.org/10.1101/631812>`_. *bioRxiv*, 631812.

.. |build| image:: https://travis-ci.com/bio2bel/bio2bel.svg?branch=master
    :target: https://travis-ci.com/bio2bel/bio2bel
    :alt: Build Status

.. |coverage| image:: https://codecov.io/gh/bio2bel/bio2bel/coverage.svg?branch=master
    :target: https://codecov.io/gh/bio2bel/bio2bel?branch=master
    :alt: Coverage Status

.. |docs| image:: http://readthedocs.org/projects/bio2bel/badge/?version=latest
    :target: http://bio2bel.readthedocs.io/en/latest/?badge=latest
    :alt: Documentation Status

.. |python_versions| image:: https://img.shields.io/pypi/pyversions/bio2bel.svg
    :alt: Stable Supported Python Versions

.. |pypi_version| image:: https://img.shields.io/pypi/v/bio2bel.svg
    :alt: Current version on PyPI

.. |pypi_license| image:: https://img.shields.io/pypi/l/bio2bel.svg
    :alt: MIT License

.. |zenodo| image:: https://zenodo.org/badge/99800349.svg
    :target: https://zenodo.org/badge/latestdoi/99800349