semvec/pypi-packages huggingface dataset:
conkit 0.13.3
Python Interface for Residue-Residue Contact Predictions
License: BSD License

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Contact Prediction ToolKit
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**A Python Interface to Contact Predictions**

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   :target: https://doi.org/10.1093/bioinformatics/btx148
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   :target: https://pypi.python.org/pypi/conkit
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   :target: https://pypi.python.org/pypi/conkit
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**NEW: Now ConKit is also compatible with residue-residue distance predictions**

ConKit is a Python library to provide a data object hierarchy and associated routine operations to
work and manipulate residue-residue contact prediction data. Main features shipped with this library
include:

- Parsers for Multiple Sequence Alignment, contact prediction and residue distance prediction files
- Analysis functions for Multiple Sequence Alignment, contact prediction data and residue distance prediction data
- Visualisation of Multiple Sequence Alignment, contact prediction data and residue distance prediction data
- Validation of models based on residue distance predictions
- Python wrappers for the contact-prediction-related software

For a general overview of ConKit, watch `this video <https://youtu.be/YhHkfa7ggAE>`_.

For an overview of model validation with ConKit, watch this `video <https://www.youtube.com/watch?v=rG_WoUhdnLU&t=565s>`_.

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Installation & Usage
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Please refer to `ConKit's documentation <http://www.conkit.org/en/latest/install.html>`_.

Contributing
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There are two ways by which you can contribute to ConKit:

1. Submit any suggestions to the `GitHub Issue Tracker`_, or
2. Fork this repository, commit your changes and submit a pull request.

Found a Bug?
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Please use the `GitHub Issue Tracker`_.

.. _GitHub Issue Tracker: https://github.com/rigdenlab/conkit/issues