semvec/pypi-packages huggingface dataset:
vessel-express 0.0.7
A simple plugin for 3D vessel segmentation
License: BSD-3-Clause
Requires Python: >=3.7

# vessel-express

[![License](https://img.shields.io/pypi/l/vessel-express.svg?color=green)](https://github.com/MMV-Lab/vessel-express-napari/raw/main/LICENSE)
[![PyPI](https://img.shields.io/pypi/v/vessel-express.svg?color=green)](https://pypi.org/project/vessel-express)
[![Python Version](https://img.shields.io/pypi/pyversions/vessel-express.svg?color=green)](https://python.org)
[![tests](https://github.com/MMV-Lab/vessel-express/workflows/tests/badge.svg)](https://github.com/MMV-Lab/vessel-express-napari/actions)
[![codecov](https://codecov.io/gh/MMV-Lab/vessel-express/branch/main/graph/badge.svg)](https://codecov.io/gh/MMV-Lab/vessel-express-napari)
[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/vessel-express)](https://napari-hub.org/plugins/vessel-express)

A simple plugin for 3D vessel segmentation of LSFM images

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This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookiecutter-napari-plugin] template.


## Installation

The easiest way to install the plugin is to open napari, go to Plugins, then Install/Uninstall plugins. You will be able to find the plugin by name "vessel-express". 

Or, you can install `vessel-express` via [pip]:

    pip install vessel-express


To install latest development version :

    pip install git+https://github.com/MMV-Lab/vessel-express-napari.git


## Documentation

We provide a [quick start guide] to explain the important pieces of this plugin. Suggestions and feature quests are very welcomed. 


## Contributing

Contributions are very welcome. Tests can be run with [tox], please ensure
the coverage at least stays the same before you submit a pull request.

## License

Distributed under the terms of the [BSD-3] license,
"vessel-express" is free and open source software

## Issues

If you encounter any problems, please [file an issue] along with a detailed description.

[napari]: https://github.com/napari/napari
[Cookiecutter]: https://github.com/audreyr/cookiecutter
[@napari]: https://github.com/napari
[MIT]: http://opensource.org/licenses/MIT
[BSD-3]: http://opensource.org/licenses/BSD-3-Clause
[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt
[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt
[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0
[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt
[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin

[file an issue]: https://github.com/MMV-Lab/vessel-express-napari/issues

[napari]: https://github.com/napari/napari
[tox]: https://tox.readthedocs.io/en/latest/
[pip]: https://pypi.org/project/pip/
[PyPI]: https://pypi.org/
[quick start guide]: https://github.com/MMV-Lab/vessel-express-napari/quick_start.md