semvec/pypi-packages huggingface dataset:
pysbml4j 1.3.1
The python client package to interact with a running SBML4j service instance
Requires Python: >=3.6

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# SBML4j python package

This is the python package to talk to a running SBML4j service instance.

## Install
This package is available through pip
To install use:

	pip install pysbml4j

## Usage
In your python project use

>	import pysbml4j
>
>	client = pysbml4j.Sbml4j()

This generates a client connection to a server running on

	http://localhost:8080

To connect to a server running at different host use the 'Configuration' class

	config = pysbml4j.Configuration("http://my-server-url:port")
	client = pysbml4j.Sbml4j(config)

Then you can communicate with the running service using the client object.

	client.listNetworks()

The main working object then is the 'Network' class.

	myNet = client.getNetworkByName("NetworkNameFromNetworkList")

The following chapter describes the current options you have for working with the network element

### Working with a network

### Basic information
You can get a basic information dictionary for a network with

	myNetInfo = myNet.getInfoDict()

### GraphML

To get a graphML Representation use:

	graphMLString = myNet.graphML()

You can provide the 'directed' attribute (true, false) to determine whether the resulting graph should be directed or not. The default is 'false'


There are more options, which I will provide documentation for shortly.
Stay tuned.

To find out more about SBML4j visit the [kohlbacherlab github repository](https://github.com/kohlbacherlab/sbml4j.git)