gtfstestnew5 2.0.4
Package to easily wrangle GTFS files geospatially.
Requires Python: >=3.10

# GTFS functions

Update March 2023:
* Removed dependency with [partridge](https://github.com/remix/partridge). As much as we love this package and think it is absolutely great, removing a dependency gives us more control and keeps this package from failing whenever something changes in `partridge`.
* We treat the GTFS as a class, where each file is a property. See examples below to find out how to work with it. We hope this simplifies your code.
* Fixed and enhanced **segment cutting**. 
* Support to identify route patterns!! Check it out using `feed.routes_patterns`.
* The rest should stay the same.

This package allows you to create various layers directly from the GTFS and visualize the results in the most straightforward way possible.

#### Warning! 
Make sure `stop_times.txt` has no `Null` values in the columns `arrival_time` and `departure_time`. If this is not the case, some functions on this package might fail.

## Table of contents
* [Installation](#installation)
* [GTFS parsing](#gtfs_parsing)
* [Stop frequencies](#stop_freq)
* [Line frequencies](#line_freq)
* [Cut in Bus segments](#segments)
* [Speeds](#speeds)
* [Segment frequencies](#segments_freq)
* [Mapping the results](#map_gdf)
* [Other plots](#plotly)

## Installation <a class="anchor" id="installation"></a>


```python
!pip install gtfs_functions
```


```python
from gtfs_functions import Feed, map_gdf
```

# GTFS Import <a class="anchor" id="gtfs_parsing"></a>
Now you can interact with your GTFS with the class `Feed`. Take a look at the class with `?Feed` to check what arguments you can specify. 

```python
gtfs_path = 'data/sfmta.zip'

# It also works with URL's
gtfs_path = 'https://transitfeeds.com/p/sfmta/60/latest/download'

feed = Feed(gtfs_path)
```


```python
routes = feed.routes
routes.head(2)
```




<div>
<table border="1" class="dataframe">
  <thead>
    <tr style="text-align: right;">
      <th></th>
      <th>route_id</th>
      <th>agency_id</th>
      <th>route_short_name</th>
      <th>route_long_name</th>
      <th>route_desc</th>
      <th>route_type</th>
      <th>route_url</th>
      <th>route_color</th>
      <th>route_text_color</th>
    </tr>
  </thead>
  <tbody>
    <tr>
      <th>0</th>
      <td>15761</td>
      <td>SFMTA</td>
      <td>1</td>
      <td>CALIFORNIA</td>
      <td></td>
      <td>3</td>
      <td>https://SFMTA.com/1</td>
      <td></td>
      <td></td>
    </tr>
    <tr>
      <th>1</th>
      <td>15766</td>
      <td>SFMTA</td>
      <td>5</td>
      <td>FULTON</td>
      <td></td>
      <td>3</td>
      <td>https://SFMTA.com/5</td>
      <td></td>
      <td></td>
    </tr>
  </tbody>
</table>
</div>



```python
stops = feed.stops
stops.head(2)
```


<table border="1" class="dataframe">
  <thead>
    <tr style="text-align: right;">
      <th></th>
      <th>stop_id</th>
      <th>stop_code</th>
      <th>stop_name</th>
      <th>stop_desc</th>
      <th>zone_id</th>
      <th>stop_url</th>
      <th>geometry</th>
    </tr>
  </thead>
  <tbody>
    <tr>
      <th>0</th>
      <td>390</td>
      <td>10390</td>
      <td>19th Avenue &amp; Holloway St</td>
      <td></td>
      <td></td>
      <td></td>
      <td>POINT (-122.47510 37.72119)</td>
    </tr>
    <tr>
      <th>1</th>
      <td>3016</td>
      <td>13016</td>
      <td>3rd St &amp; 4th St</td>
      <td></td>
      <td></td>
      <td></td>
      <td>POINT (-122.38979 37.77262)</td>
    </tr>
  </tbody>
</table>
</div>




```python
stop_times = feed.stop_times
stop_times.head(2)
```




<div>
<table border="1" class="dataframe">
  <thead>
    <tr style="text-align: right;">
      <th></th>
      <th>trip_id</th>
      <th>arrival_time</th>
      <th>departure_time</th>
      <th>stop_id</th>
      <th>stop_sequence</th>
      <th>stop_headsign</th>
      <th>pickup_type</th>
      <th>drop_off_type</th>
      <th>shape_dist_traveled</th>
      <th>route_id</th>
      <th>service_id</th>
      <th>direction_id</th>
      <th>shape_id</th>
      <th>stop_code</th>
      <th>stop_name</th>
      <th>stop_desc</th>
      <th>zone_id</th>
      <th>stop_url</th>
      <th>geometry</th>
    </tr>
  </thead>
  <tbody>
    <tr>
      <th>0</th>
      <td>9413147</td>
      <td>81840.0</td>
      <td>81840.0</td>
      <td>4015</td>
      <td>1</td>
      <td></td>
      <td>NaN</td>
      <td></td>
      <td>NaN</td>
      <td>15761</td>
      <td>1</td>
      <td>0</td>
      <td>179928</td>
      <td>14015</td>
      <td>Clay St &amp; Drumm St</td>
      <td></td>
      <td></td>
      <td></td>
      <td>POINT (-122.39682 37.79544)</td>
    </tr>
    <tr>
      <th>1</th>
      <td>9413147</td>
      <td>81902.0</td>
      <td>81902.0</td>
      <td>6294</td>
      <td>2</td>
      <td></td>
      <td>NaN</td>
      <td></td>
      <td>NaN</td>
      <td>15761</td>
      <td>1</td>
      <td>0</td>
      <td>179928</td>
      <td>16294</td>
      <td>Sacramento St &amp; Davis St</td>
      <td></td>
      <td></td>
      <td></td>
      <td>POINT (-122.39761 37.79450)</td>
    </tr>
  </tbody>
</table>
</div>




```python
trips = feed.trips
trips.head(2)
```




<div>
<table border="1" class="dataframe">
  <thead>
    <tr style="text-align: right;">
      <th></th>
      <th>trip_id</th>
      <th>route_id</th>
      <th>service_id</th>
      <th>direction_id</th>
      <th>shape_id</th>
    </tr>
  </thead>
  <tbody>
    <tr>
      <th>0</th>
      <td>9547346</td>
      <td>15804</td>
      <td>1</td>
      <td>0</td>
      <td>180140</td>
    </tr>
    <tr>
      <th>1</th>
      <td>9547345</td>
      <td>15804</td>
      <td>1</td>
      <td>0</td>
      <td>180140</td>
    </tr>
  </tbody>
</table>
</div>




```python
shapes = feed.shapes
shapes.head(2)
```




<div>
<table border="1" class="dataframe">
  <thead>
    <tr style="text-align: right;">
      <th></th>
      <th>shape_id</th>
      <th>geometry</th>
    </tr>
  </thead>
  <tbody>
    <tr>
      <th>0</th>
      <td>179928</td>
      <td>LINESTRING (-122.39697 37.79544, -122.39678 37...</td>
    </tr>
    <tr>
      <th>1</th>
      <td>179929</td>
      <td>LINESTRING (-122.39697 37.79544, -122.39678 37...</td>
    </tr>
  </tbody>
</table>
</div>



# Stop frequencies <a class="anchor" id="stop_freq"></a>

Returns a geodataframe with the frequency for each combination of `stop`, `time of day` and `direction`. Each row with a **Point** geometry. The user can optionally specify `cutoffs` as a list in case the default is not good. These `cutoffs` should be specified at the moment of reading the `Feed` class. These `cutoffs` are the times of days to use as aggregation.


```python
cutoffs = [0,6,9,15.5,19,22,24]

feed = Feed(gtfs_path, cutoffs=cutoffs)
stop_freq = feed.stops_freq
stop_freq.head(2)
```




<div>
<table border="1" class="dataframe">
  <thead>
    <tr style="text-align: right;">
      <th></th>
      <th>stop_id</th>
      <th>dir_id</th>
      <th>window</th>
      <th>ntrips</th>
      <th>min_per_trip</th>
      <th>stop_name</th>
      <th>geometry</th>
    </tr>
  </thead>
  <tbody>
    <tr>
      <th>8157</th>
      <td>5763</td>
      <td>Inbound</td>
      <td>0:00-6:00</td>
      <td>1</td>
      <td>360</td>
      <td>Noriega St &amp; 48th Ave</td>
      <td>POINT (-122.50785 37.75293)</td>
    </tr>
    <tr>
      <th>13102</th>
      <td>7982</td>
      <td>Outbound</td>
      <td>0:00-6:00</td>
      <td>1</td>
      <td>360</td>
      <td>Moscow St &amp; RussiaAvet</td>
      <td>POINT (-122.42996 37.71804)</td>
    </tr>
    <tr>
      <th>9539</th>
      <td>6113</td>
      <td>Inbound</td>
      <td>0:00-6:00</td>
      <td>1</td>
      <td>360</td>
      <td>Portola Dr &amp; Laguna Honda Blvd</td>
      <td>POINT (-122.45526 37.74310)</td>
    </tr>
    <tr>
      <th>12654</th>
      <td>7719</td>
      <td>Inbound</td>
      <td>0:00-6:00</td>
      <td>1</td>
      <td>360</td>
      <td>Middle Point &amp; Acacia</td>
      <td>POINT (-122.37952 37.73707)</td>
    </tr>
    <tr>
      <th>9553</th>
      <td>6116</td>
      <td>Inbound</td>
      <td>0:00-6:00</td>
      <td>1</td>
      <td>360</td>
      <td>Portola Dr &amp; San Pablo Ave</td>
      <td>POINT (-122.46107 37.74040)</td>
    </tr>
  </tbody>
</table>
</div>



# Line frequencies <a class="anchor" id="line_freq"></a>

Returns a geodataframe with the frequency for each combination of `line`, `time of day` and `direction`. Each row with a **LineString** geometry. The user can optionally specify `cutoffs` as a list in case the default is not good. These `cutoffs` should be specified at the moment of reading the `Feed` class. These `cutoffs` are the times of days to use as aggregation.


```python
cutoffs = [0,6,9,15.5,19,22,24]
line_freq = gtfs.lines_freq(stop_times, trips, shapes, routes, cutoffs = cutoffs)
line_freq.head()
```




<div>
<table border="1" class="dataframe">
  <thead>
    <tr style="text-align: right;">
      <th></th>
      <th>route_id</th>
      <th>route_name</th>
      <th>dir_id</th>
      <th>window</th>
      <th>min_per_trip</th>
      <th>ntrips</th>
      <th>geometry</th>
    </tr>
  </thead>
  <tbody>
    <tr>
      <th>376</th>
      <td>15808</td>
      <td>44 O'SHAUGHNESSY</td>
      <td>Inbound</td>
      <td>0:00-6:00</td>
      <td>360</td>
      <td>1</td>
      <td>LINESTRING (-122.46459 37.78500, -122.46352 37...</td>
    </tr>
    <tr>
      <th>378</th>
      <td>15808</td>
      <td>44 O'SHAUGHNESSY</td>
      <td>Inbound</td>
      <td>0:00-6:00</td>
      <td>360</td>
      <td>1</td>
      <td>LINESTRING (-122.43416 37.73355, -122.43299 37...</td>
    </tr>
    <tr>
      <th>242</th>
      <td>15787</td>
      <td>25 TREASURE ISLAND</td>
      <td>Inbound</td>
      <td>0:00-6:00</td>
      <td>360</td>
      <td>1</td>
      <td>LINESTRING (-122.39611 37.79013, -122.39603 37...</td>
    </tr>
    <tr>
      <th>451</th>
      <td>15814</td>
      <td>54 FELTON</td>
      <td>Inbound</td>
      <td>0:00-6:00</td>
      <td>360</td>
      <td>1</td>
      <td>LINESTRING (-122.38845 37.73994, -122.38844 37...</td>
    </tr>
    <tr>
      <th>241</th>
      <td>15787</td>
      <td>25 TREASURE ISLAND</td>
      <td>Inbound</td>
      <td>0:00-6:00</td>
      <td>360</td>
      <td>1</td>
      <td>LINESTRING (-122.39542 37.78978, -122.39563 37...</td>
    </tr>
  </tbody>
</table>
</div>



# Bus segments <a class="anchor" id="segments"></a>

Returns a geodataframe where each segment is a row and has a **LineString** geometry.


```python
segments_gdf = feed.segments
segments_gdf.head(2)
```




<div>
<table border="1" class="dataframe">
  <thead>
    <tr style="text-align: right;">
      <th></th>
      <th>route_id</th>
      <th>direction_id</th>
      <th>stop_sequence</th>
      <th>start_stop_name</th>
      <th>end_stop_name</th>
      <th>start_stop_id</th>
      <th>end_stop_id</th>
      <th>segment_id</th>
      <th>shape_id</th>
      <th>geometry</th>
      <th>distance_m</th>
    </tr>
  </thead>
  <tbody>
    <tr>
      <th>0</th>
      <td>15761</td>
      <td>0</td>
      <td>1</td>
      <td>Clay St &amp; Drumm St</td>
      <td>Sacramento St &amp; Davis St</td>
      <td>4015</td>
      <td>6294</td>
      <td>4015-6294</td>
      <td>179928</td>
      <td>LINESTRING (-122.39697 37.79544, -122.39678 37...</td>
      <td>205.281653</td>
    </tr>
    <tr>
      <th>1</th>
      <td>15761</td>
      <td>0</td>
      <td>2</td>
      <td>Sacramento St &amp; Davis St</td>
      <td>Sacramento St &amp; Battery St</td>
      <td>6294</td>
      <td>6290</td>
      <td>6294-6290</td>
      <td>179928</td>
      <td>LINESTRING (-122.39761 37.79446, -122.39781 37...</td>
      <td>238.047505</td>
    </tr>
  </tbody>
</table>
</div>



# Scheduled Speeds <a class="anchor" id="speeds"></a>

Returns a geodataframe with the `speed_kmh` for each combination of `route`, `segment`, `time of day` and `direction`. Each row with a **LineString** geometry. The user can optionally specify `cutoffs` as explained in previous sections.


```python
# Cutoffs to make get hourly values
speeds = feed.avg_speeds
speeds.head(1)
```




<div>
<table border="1" class="dataframe">
  <thead>
    <tr style="text-align: right;">
      <th></th>
      <th>route_id</th>
      <th>route_name</th>
      <th>direction_id</th>
      <th>segment_id</th>
      <th>window</th>
      <th>speed_kmh</th>
      <th>start_stop_id</th>
      <th>start_stop_name</th>
      <th>end_stop_id</th>
      <th>end_stop_name</th>
      <th>distance_m</th>
      <th>stop_sequence</th>
      <th>runtime_sec</th>
      <th>segment_max_speed_kmh</th>
      <th>geometry</th>
    </tr>
  </thead>
  <tbody>
    <tr>
      <th>0</th>
      <td>15761</td>
      <td>1 CALIFORNIA</td>
      <td>Inbound</td>
      <td>4015-6294</td>
      <td>10:00-11:00</td>
      <td>12.0</td>
      <td>4015</td>
      <td>Clay St &amp; Drumm St</td>
      <td>6294</td>
      <td>Sacramento St &amp; Davis St</td>
      <td>205.281653</td>
      <td>1</td>
      <td>61.9</td>
      <td>12.0</td>
      <td>LINESTRING (-122.39697 37.79544, -122.39678 37...</td>
    </tr>
  </tbody>
</table>
</div>



# Segment frequencies <a class="anchor" id="segments_freq"></a>


```python
segments_freq = feed.segments_freq
seg_freq.head(2)
```




<div>
<table border="1" class="dataframe">
  <thead>
    <tr style="text-align: right;">
      <th></th>
      <th>route_id</th>
      <th>route_name</th>
      <th>direction_id</th>
      <th>segment_name</th>
      <th>window</th>
      <th>min_per_trip</th>
      <th>ntrips</th>
      <th>start_stop_id</th>
      <th>start_stop_name</th>
      <th>end_stop_name</th>
      <th>geometry</th>
    </tr>
  </thead>
  <tbody>
    <tr>
      <th>23191</th>
      <td>ALL_LINES</td>
      <td>All lines</td>
      <td>NA</td>
      <td>3628-3622</td>
      <td>0:00-6:00</td>
      <td>360</td>
      <td>1</td>
      <td>3628</td>
      <td>Alemany Blvd &amp; St Charles Ave</td>
      <td>Alemany Blvd &amp; Arch St</td>
      <td>LINESTRING (-122.46949 37.71045, -122.46941 37...</td>
    </tr>
    <tr>
      <th>6160</th>
      <td>15787</td>
      <td>25 TREASURE ISLAND</td>
      <td>Inbound</td>
      <td>7948-8017</td>
      <td>0:00-6:00</td>
      <td>360</td>
      <td>1</td>
      <td>7948</td>
      <td>Transit Center Bay 29</td>
      <td>Shoreline Access Road</td>
      <td>LINESTRING (-122.39611 37.79013, -122.39603 37...</td>
    </tr>
  </tbody>
</table>
</div>



# Map your work <a class="anchor" id="map_gdf"></a>

## Stop frequencies
```python
# Stops
condition_dir = stop_freq.dir_id == 'Inbound'
condition_window = stop_freq.window == '6:00-9:00'

gdf = stop_freq.loc[(condition_dir & condition_window),:].reset_index()

gtfs.map_gdf(gdf = gdf, 
              variable = 'ntrips', 
              colors = ["#d13870", "#e895b3" ,'#55d992', '#3ab071', '#0e8955','#066a40'], 
              tooltip_var = ['min_per_trip'] , 
              tooltip_labels = ['Frequency: '], 
              breaks = [10, 20, 30, 40, 120, 200])
```
![stops](/images/map_stop_freq.jpg)

## Line frequencies
```python
# Line frequencies
condition_dir = line_freq.dir_id == 'Inbound'
condition_window = line_freq.window == '6:00-9:00'

gdf = line_freq.loc[(condition_dir & condition_window),:].reset_index()

gtfs.map_gdf(gdf = gdf, 
              variable = 'ntrips', 
              colors = ["#d13870", "#e895b3" ,'#55d992', '#3ab071', '#0e8955','#066a40'], 
              tooltip_var = ['route_name'] , 
              tooltip_labels = ['Route: '], 
              breaks = [5, 10, 20, 50])
```
![line](/images/map_line_freq.jpg)

## Speeds
If you are looking to visualize data at the segment level for all lines I recommend you go with something more powerful like kepler.gl (AKA my favorite data viz library). For example, to check the scheduled speeds per segment:
```python
# Speeds
import keplergl as kp
m = kp.KeplerGl(data=dict(data=speeds, name='Speed Lines'), height=400)
m
```
![kepler_speeds](/images/kepler_speeds.jpg)

## Segment frequencies
```python
# Segment frequencies
import keplergl as kp
m = kp.KeplerGl(data=dict(data=seg_freq, name='Segment frequency'), height=400)
m
```
![kepler_segment_freq](/images/kepler_seg_freq.jpg)

# Other plots <a class="anchor" id="plotly"></a>
## Histogram
```python
# Histogram
import plotly.express as px
px.histogram(
    stop_freq.loc[stop_freq.min_per_trip<50], 
    x='frequency', 
    title='Stop frequencies',
    template='simple_white', 
    nbins =20)
```
![histogram](/images/histogram.jpg)

## Heatmap
```python
# Heatmap
import plotly.graph_objects as go
dir_0 = speeds.loc[(speeds.dir_id=='Inbound')&(speeds.route_name=='1 CALIFORNIA')].sort_values(by='stop_sequence') 
dir_0['hour'] = dir_0.window.apply(lambda x: int(x.split(':')[0]))
dir_0.sort_values(by='hour', ascending=True, inplace=True)

fig = go.Figure(data=go.Heatmap(
                   z=dir_0.speed_kmh,
                   y=dir_0.start_stop_name,
                   x=dir_0.window,
                   hoverongaps = False,
                   colorscale=px.colors.colorbrewer.RdYlBu, 
                   reversescale=False
))

fig.update_yaxes(title_text='Stop', autorange='reversed')
fig.update_xaxes(title_text='Hour of day', side='top')
fig.update_layout(showlegend=False, height=600, width=1000,
                 title='Speed heatmap per direction and hour of the day')

fig.show()
```
![heatmap](/images/heatmap.jpg)

## Line chart
```python
by_hour = speeds.pivot_table('speed_kmh', index = ['window'], aggfunc = ['mean','std'] ).reset_index()
by_hour.columns = ['_'.join(col).strip() for col in by_hour.columns.values]
by_hour['hour'] = by_hour.window_.apply(lambda x: int(x.split(':')[0]))
by_hour.sort_values(by='hour', ascending=True, inplace=True)

# Scatter
fig = px.line(by_hour, 
           x='window_', 
           y='mean_speed_kmh', 
           template='simple_white', 
           #error_y = 'std_speed_kmh'
                )

fig.update_yaxes(rangemode='tozero')

fig.show()
```
![line_chart](/images/speed_hour.jpg)