semvec/pypi-packages huggingface dataset:
roidynamics 0.2.0
Time-evolution analysis of image intensity under specific mask geometries
License: BSD 3-Clause License
Requires Python: >=3.8

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# roidynamics

Small Python package providing tools to analyze the dynamics of intensity in time-lapse microscopy images split into regions of specific geometries.  

## Installation

You can install this package directly using: 

```
pip install roidynamics
```

**Note**: If you encounter errors when trying to use the ND2 format because of errors related to unusual ROIs (non-square), you can try to install an alternative version with:

```
pip install git+https://github.com/guiwitz/nd2reader.git@master#egg=nd2reader -U
```

## Authors

This package has been created by Guillaume Witz, Data Science Lab, University of Bern in collaboration with Jakobus van Unen, Pertz lab, Institute of Cell Biology, University of Bern.