semvec/pypi-packages huggingface dataset:
ProTstab2 2.0.2
Protein prediction package
License: MIT
Requires Python: >=3.6

# ProTstab2
Protein prediction package


## Environmental installation

### R
R language version requires version 4.1.1
Two packages need to be installed simultaneously:
```
install.packages("devtools")
library(devtools)
install_version("DT", version="0.19",repos="http://cran.us.r-project.org")
install_version("protr", version="1.6.2",repos="http://cran.us.r-project.org")
```
Set Simultaneously`R_HOME`to environment variable

### Java
Java version requires `1.8` or higher


### Python
Python version requires`3.6`or higher


## How to use
### If there is a protein sequence
```python
_name = ""
_seq = """>sp|P30177|YBIB_ECOLI Uncharacterized protein YbiB OS=Escherichia coli (strain K12) OX=83333 GN=ybiB PE=1 SV=1
MDYRKIIKEIGRGKNHARDLDRDTARGLYAHMLNGEVPDLELGGVLIALRIKGEGEAEML
GFYEAMQNHTIKLTPPAGKPMPIVIPSYNGARKQANLTPLLAILLHKLGFPVVVHGVSED
PTRVLTETIFELMGITPTLHGGQAQAKLDEHQPVFMPVGAFCPPLEKQLAMRWRMGVRNS
AHTLAKLATPFAEGEALRLSSVSHPEYIGRVAKFFSDIGGRALLMHGTEGEVYANPQRCP
QINLIDREGMRVLYEKQDTAGSELLPQAKDPETTAQWIERCLAGSEPIPESLKIQMACCL
VATGEAATISDGLARVNQAF"""
p = ProTstab2()
r = p.predict(_name, _seq)
print(r)
# 55.00748285501498
```
### If there is no protein sequence, the following methods can be used
```python
_name = ">P30177"
_seq = ""
p = ProTstab2()
r = p.predict(_name, _seq)
print(r)
# 55.00748285501498
```
The first method is recommended here for the following reasons：
1. Due to the use of crawlers, it is not guaranteed that data can be obtained every time, and the program may crash
2. You can obtain specific protein sequence values

## Disclaimers
The applications involved in this package are for learning and communication purposes only and shall not be used for any commercial purposes. 
Any legal disputes arising from this have nothing to do with me!