opendataval 1.3.0
Transparent Data Valuation
License: MIT
Requires Python: >=3.9.0
Keywords: Data Centric,Data Valuation,Machine Learning

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# OpenDataVal: a Unified Benchmark for Data Valuation

<!-- > A unified library for transparent data valuation benchmarks -->

Assessing the quality of individual data points is critical for improving model performance and mitigating biases. However, there is no way to systematically benchmark different algorithms.

**OpenDataVal** is an open-source initiative that with a diverse array of datasets/models (image, NLP, and tabular), data valuation algorithms, and evaluation tasks using just a few lines of code.

**OpenDataVal** also provides a leaderboards for data evaluation tasks. We've curated and added
artificial noise to some datasets. Create your own `DataEvaluator` to top the [leaderboards](https://opendataval.github.io/leaderboards). **OpenDataVal** is accepted at NeurIPS 2023 track on Datasets and Benchmarks.

| Overview | |
|----------|-|
|**Paper**| **[Paper link](https://arxiv.org/abs/2306.10577)** |
|**Python**|[![Python Version](https://img.shields.io/badge/python-3.9%20%7C%203.10%20%7C%203.11-blue?style=for-the-badge)](https://www.python.org/)|
|**Dependencies**|[![Pytorch][PyTorch-shield]][PyTorch-url] [![scikit-learn][scikit-learn-shield]][scikit-learn-url] [![numpy][numpy-shield]][numpy-url] [![Code style: black](https://img.shields.io/badge/code%20style-black-000000.svg?style=for-the-badge&logo=appveyor)](https://github.com/psf/black) |
|**Documentation**| [![Github Pages](https://img.shields.io/badge/github%20pages-121013?style=for-the-badge&logo=github&logoColor=white)](https://opendataval.github.io) |
|**CI/CD**|[![Build][test-shield]][test-url] ![Coverage][coverage_badge] |
|**Issues**| [![Issues][issues-shield]][issues-url] |
|**License**|[![MIT License][license-shield]][license-url]|
|**Releases**|[![Releases][release-shield]][release-url]|
|**Citation**| **[Cite Us][citation-url]** |
<!-- |**Contributors**|[![Contributors][contributors-shield]][contributors-url]| -->
## :sparkles: Features
----

| Feature | Status | Links | Notes |
|---------|--------|-------|-------|
| **[Datasets](https://github.com/opendataval/opendataval/tree/main/opendataval/dataloader/readme.md)** | Stable | [Docs](https://opendataval.github.io/opendataval.dataloader.datasets.html#opendataval-dataloader-datasets-package) | Embeddings available for image/NLP datasets |
| **[Models](https://github.com/opendataval/opendataval/tree/main/opendataval/model/readme.md)** | Stable | [Docs](https://opendataval.github.io/opendataval.model.html#module-opendataval.model) | Support available for sk-learn models |
| **[Data Evaluators](https://github.com/opendataval/opendataval/tree/main/opendataval/dataval/readme.md)** | Stable | [Docs](https://opendataval.github.io/opendataval.dataval.html#module-opendataval.dataval) | |
| **[Experiments](https://github.com/opendataval/opendataval/tree/main/opendataval/experiment/readme.md)** | Stable | [Docs](https://opendataval.github.io/opendataval.experiment.html#module-opendataval.experiment) | |
| **[Examples](https://github.com/opendataval/opendataval/tree/main/examples/readme.md)** | Stable | | |
| **[CLI](https://github.com/opendataval/opendataval/tree/main/opendataval/__main__.py)** | Experimental | `opendataval --help` | No support for null values |

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## :hourglass_flowing_sand: Installation options
1. Install with pip
    ```sh
    pip install opendataval
    ```
2. Clone the repo and install
   ```sh
   git clone https://github.com/opendataval/opendataval.git
   make install
   ```
    a. Install optional dependencies if you're [contributing](https://github.com/opendataval/opendataval/blob/main/CONTRIBUTING.md)
    ```sh
    make install-dev
    ```
    b. If you want to pull in kaggle datasets, I'd reccomend looking how to add a kaggle folder to the current directory. Tutorial [here](https://www.analyticsvidhya.com/blog/2021/04/how-to-download-kaggle-datasets-using-jupyter-notebook/)

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<!-- USAGE EXAMPLES -->
## :zap: Quick Start
----
To set up an experiment on DataEvaluators. Feel free to change the source code as needed for a project.

```python
import opendataval
from opendataval.experiment import ExperimentMediator
from opendataval.dataval import DataOob
from opendataval.experiment import discover_corrupted_sample, noisy_detection

exper_med = ExperimentMediator.model_factory_setup(
    dataset_name='iris',
    force_download=False,
    train_count=50,
    valid_count=50,
    test_count=50,
    model_name='ClassifierMLP',
    train_kwargs={'epochs': 5, 'batch_size': 20},
)
list_of_data_evaluators = [DataOob()]  # Define evaluators here
eval_med = exper_med.compute_data_values(list_of_data_evaluators)

# Runs a discover the noisy data experiment for each DataEvaluator and plots
data, fig = eval_med.plot(discover_corrupted_sample)

# Runs non-plottable experiment
data = eval_med.evaluate(noisy_detection)
```

### :computer: CLI
`opendataval` comes with a quick [CLI](https://github.com/opendataval/opendataval/tree/main/opendataval/__main__.py) tool, The tool is under development and the template for a csv input is found at [`cli.csv`](https://github.com/opendataval/opendataval/tree/main/cli.csv). Note that for kwarg arguments, the input must be valid json.

To use run the following command if installed with make-install:
```sh
opendataval --file cli.csv -n [job_id] -o [path/to/output/]
```
To run without installing the script:
```
python opendataval --file cli.csv -n [job_id] -o [path/to/output/]
```

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### :control_knobs: API
Here are the 4 interacting parts of opendataval
1. `DataFetcher`, Loads data and holds meta data regarding splits
2. `Model`, trainable prediction model.
3. `DataEvaluator`, Measures the data values of input data point for a specified model.
4. `ExperimentMediator`, facilitates experiments regarding data values across several `DataEvaluator`s

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#### [`DataFetcher`](https://github.com/opendataval/opendataval/tree/main/opendataval/dataloader/readme.md)
The DataFetcher takes the name of a [`Register`](https://github.com/opendataval/opendataval/tree/main/opendataval/dataloader/readme.md#register-datasets) dataset and loads, transforms, splits, and adds noise to the data set.
```python
from opendataval.dataloader import DataFetcher

DataFetcher.datasets_available()  # ['dataset_name1', 'dataset_name2']
fetcher = DataFetcher(dataset_name='dataset_name1')

fetcher = fetcher.split_dataset_by_count(70, 20, 10)
fetcher = fetcher.noisify(mix_labels, noise_rate=.1)

x_train, y_train, x_valid, y_valid, x_test, y_test = fetcher.datapoints
```

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#### [`Model`](https://github.com/opendataval/opendataval/tree/main/opendataval/model/readme.md)
`Model` is the predictive model for Data Evaluators.

```python
from opendataval.model import LogisticRegression

model = LogisticRegression(input_dim, output_dim)

model.fit(x, y)
model.predict(x)
>>> torch.Tensor(...)
```

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#### [`DataEvaluator`](https://github.com/opendataval/opendataval/tree/main/opendataval/dataval/readme.md)
We have a catalog of `DataEvaluator` to run experiments. To do so, input the `Model`, `DataFetcher`, and an evaluation metric (such as accuracy).

```python
from opendataval.dataval.ame import AME

dataval = (
    AME(num_models=8000)
    .train(fetcher=fetcher, pred_model=model, metric=metric)
)

data_values = dataval.data_values  # Cached values
data_values = dataval.evaluate_data_values()  # Recomputed values
>>> np.ndarray([.888, .132, ...])
```
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#### [`ExperimentMediator`](https://github.com/opendataval/opendataval/tree/main/opendataval/experiment/readme.md)
`ExperimentMediator` is helps make a cohesive and controlled experiment. NOTE Warnings are raised if errors occur in a specific `DataEvaluator`.
```python
expermed = ExperimentrMediator(fetcher, model, train_kwargs, metric_name).compute_data_values(data_evaluators)
```

Run experiments by passing in an experiment function: `(DataEvaluator, DataFetcher, ...) - > dict[str, Any]`. There are 5 found `exper_methods.py` with three being plotable.
```python
df = expermed.evaluate(noisy_detection)
df, figure = expermed.plot(discover_corrupted_sample)
```

For more examples, please refer to the [Documentation](https://opendataval.github.io)

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## :medal_sports: opendataval Leaderboards
For datasets that start with the prefix challenge, we provide [leaderboards](https://opendataval.github.io/leaderboards). Compute the data values with an `ExperimentMediator` and use the `save_dataval` function to save a csv. Upload it to [here](https://opendataval.github.io/leaderboards)! Uploading will allow us to systematically compare your `DataEvaluator` against others in the field.

The [available challenges](https://github.com/opendataval/opendataval/tree/main/opendataval/dataloader/datasets/challenge.py) are currently:
1. `challenge-iris`

```python
exper_med = ExperimentMediator.model_factory_setup(
    dataset_name='challenge-...', model_name=model_name, train_kwargs={...}, metric_name=metric_name
)
exper_med.compute_data_values([custom_data_evaluator]).evaluate(save_dataval, save_output=True)
```

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<!-- CONTRIBUTING -->
## :wave: Contributing

If you have a quick suggestion, reccomendation, bug-fixes please open an [issue][issues-url].
If you want to contribute to the project, either through data sets, experiments, presets, or fix stuff, please see our [Contribution page](https://github.com/opendataval/opendataval/blob/main/CONTRIBUTING.md).

1. Fork the Project
2. Create your Feature Branch (`git checkout -b feature/AmazingFeature`)
3. Commit your Changes (`git commit -m 'Add some AmazingFeature'`)
4. Push to the Branch (`git push origin feature/AmazingFeature`)
5. Open a Pull Request

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## :bulb: Vision
* **clean, descriptive specification syntax** -- based on modern object-oriented design principles for data science.
* **fair model assessment and benchmarking** -- Easily build and evaluate your Data Evaluators
* **easily extensible** -- Easily add your own data sets,

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<!-- LICENSE -->
## :classical_building: License

Distributed under the MIT License. See [`LICENSE.txt`][license-url] for more information.

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## Cite Us

If you found the library or the paper useful, please cite us!
```
@article{
    jiang2023opendataval,
    title={OpenDataVal: a Unified Benchmark for Data Valuation},
    author={Kevin Fu Jiang and Weixin Liang and James Zou and Yongchan Kwon},
    booktitle={Thirty-seventh Conference on Neural Information Processing Systems Datasets and Benchmarks Track},
    year={2023},
    url={https://openreview.net/forum?id=eEK99egXeB}
}
```

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