semvec/pypi-packages huggingface dataset:
vars-localize 0.1.0
Tool for creating localization with VARS.
Requires Python: >=3.8

# vars-localize
Tool for creating localizations within the VARS database.

Author: Kevin Barnard ([kbarnard@mbari.org](mailto:kbarnard@mbari.org))

## :hammer: Installation

> [!NOTE]
> VARS Localize requires Python 3.8 or later.

To install VARS Localize, run:
```bash
pip install vars-localize
```

## :rocket: Usage

To start the application, run:
```bash
vars-localize [-u URL]
```

Once the application launches, log in with your VARS username and password.

Search for a concept in the bar at the top left of the application, then select a concept from the list of results to populate a tree of imaged moments in the pane below. 
Select an observation from the children in the subtree of the imaged moment, and draw a bounding box around the observed concept by clicking and dragging.

You can double-click on any localization to edit its properties in a dialog.
Additionally, a localization can be resized by dragging the square corners of its bounding box.

## Credits

VARS Localize is made with [PyQt6](https://pypi.org/project/PyQt6/).

---

Copyright &copy; 2019 [Monterey Bay Aquarium Research Institute](https://www.mbari.org/)
cdisc-library-client 0.1.6
A CDISC Library client

# cdisc-library-client

Python client for accessing the CDISC library. Deployed to PYPI

## operations

```
get_sdtm - get an sdtm standard
get_adam - get an adam or adamig standard
get_cdash - get a cdash standard
get_sdtmig - gets sdtmig standard
get_sendig - gets sendig standard
get_cdashig - gets cdashig standard

get_terminology_package - get a ct package given the version
get_codelist_terms - returns an array of all terms in a codelist
get_codelist_term - returns the library representation of a codelist term

get_rule_catalogs - returns a list of links to all rule catalogs in the CDISC Library
get_rules_catalog - returns all rules in a single rules catalog.
get_rule - gets a rule definition given standard, version, and rule id

get_bc_packages - get biomedical concept package list
get_bc_package_biomedicalconcepts - get biomedical concept list in a package 
get_bc_package_biomedicalconcept - get biomedical concept in a package
get_bc_latest_biomedicalconcepts - get biomedical concept list (latest versions)
get_bc_latest_biomedicalconcept - get biomedical concept (latest version)
get_bc_categories - get biomedical concept categories list
get_bc_latest_biomedicalconcepts_category - get biomedical concepts for a given category (latest version)

get_sdtm_packages - get sdtm dataset specialization package list
get_sdtm_package_datasetspecializations - get sdtm dataset specialization list in a package
get_sdtm_package_datasetspecialization - get sdtm dataset specialization in a package
get_sdtm_latest_sdtm_datasetspecializations - get sdtm dataset specialization list (latest versions)
get_sdtm_latest_sdtm_datasetspecialization - get sdtm dataset specialization (latest version)
get_sdtm_domains - get sdtm dataset specialization domain list
get_sdtm_latest_sdtm_datasetspecializations_domain - get a list of sdtm dataset specializations for a given domain (latest version)

get_biomedicalconcept_latest_datasetspecializations - get a list of dataset specializations that specialize a biomedical concept (latest versions)
```

More info on CDISC Library API endpoints can be found at the [CDISC Library API Portal](https://api.developer.library.cdisc.org/).
dynamicalsystem-halogen 0.1.2
Shared library from dynamicalsystem
Requires Python: >=3.13

# Halogen

Halogen contains common objects and functions for dynamicalsystem projects:

## Config

`dynamicalsystem.halogen.config` provides a single instance immutable object which will provide a project's config given a name (typically `__name__`) in the presence of two environment variables:

- `DYNAMICAL_SYSTEM_FOLDER` - a path to the config folders
- `DYNAMICAL_SYSTEM_ENVIRONMENT` - the environment which the config applies to (dev, test, prod, e.g.)

## Utils

`dynamicalsystem.halogen.utils` provides common functions which do fun stuff like:

- `url_join` which jangs some `/`s into the right places given some url fragments as a string and a list of strings.
- `cli_hyperlink` which creates a hyperlink which will display on the cli.
- `possessive` which turns a provided noun into the possessive form in English.