semvec/pypi-packages huggingface dataset:
mhcflow 0.2.2
MHC Class I and II workflow with fisher, realigner and typer.
License: MIT
Requires Python: >=3.10
Keywords: bioinformatics, genomics, sequencing, HLA typing

# mhcflow

[![PyPI version](https://img.shields.io/pypi/v/mhcflow)](https://pypi.org/project/mhcflow/)
![Python versions](https://img.shields.io/pypi/pyversions/mhcflow)
[![PyPI Downloads](https://img.shields.io/pypi/dm/mhcflow)](https://pypistats.org/packages/mhcflow)
![License](https://img.shields.io/pypi/l/mhcflow)

MHC class I and II typing workflow including fishing, realigning, and typing that
generates results ready for detection of HLA loss of heterozygosity (LOH) and
peptide binding prediction.

## Installation

Starting from `v0.2.0`, `mhcflow` can be installed from PyPI:

```bash
pip install mhcflow
```

If you prefer to use the shell script implementation, please check out the
`v0.1.0` branch of this repo. For details on how to use the `v0.1.0` version,
please refer to the [documentation](https://svm-zhang.github.io/mhcflow).

## Quick start

Please refer to [documentation](https://svm-zhang.github.io/mhcflow) for more details.