semvec/pypi-packages huggingface dataset:
lpath-md 1.0.7
A user-friendly, Python tool for clustering pathways from molecular dynamics simulations.
License: MIT
Requires Python: >=3.8

![lpath_logo.png](https://raw.githubusercontent.com/chonglab-pitt/LPATH/main/logo/lpath_logo.png)

Linguistics Pathway Analysis of Trajectories using Hierarchical clustering
==============================
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A user-friendly, Python tool for clustering pathways from molecular dynamics and weighted ensemble simulations.


## Copyright

This software is distributed with the MIT License.

Copyright © 2023, Anthony Bogetti, Jeremy Leung, Lillian Chong


## Quickstart Guide

Users may install this program via [PyPI](https://pypi.org/project/lpath/) (recommended) or 
from [GitHub Source](https://github.com/chonglab-pitt/lpath). By default, LPATH is installed with the bare minimum to 
run analysis on classic MD simulations. Users who intend to analyze WESTPA simulations should install WESTPA 
in the same environment.

1. Install from [PyPI](https://pypi.org/project/lpath/):
    ```python -m  pip install lpath```
2. Install from [GitHub Source](https://github.com/chonglab-pitt/lpath):
    1. Clone the git repository:  ```git clone https://github.com:chonglab-pitt/lpath```
    2. Move into the folder: ```cd lpath```
    3. Install the program in editable mode: ```python -m pip install -e .```
3. There are a variety of optional dependencies you may install. These work with either installation options listed above.
    1. Install with `WESTPA`: ```python -m pip install lpath[westpa]```
    2. Install with terminal user interface (TUI): ```python -m pip install lpath[tui]```
    3. Developers can install with [dev] (all dependencies) or [test] (minimal dependencies to run tests): ```python -m pip install lpath[dev]```
    4. Options may be combined: ```python -m pip install lpath[westpa,tui]```


### Acknowledgements
 
Project based on the 
[Computational Molecular Science Python Cookiecutter](https://github.com/molssi/cookiecutter-cms) version 1.1.
photo-cleanup 0.1.7
Photo cleanup tool. Recursively deletes unnecessary JPG files in a folder when a matching RAW file exists
License: MIT
Requires Python: >=3.13

# photo-cleanup
Cleanup jpg photos where raw files exist with the same name

```
 Usage: photo-cleanup [OPTIONS] [STARTDIR]                                                                                                                                                                
                                                                                                                                                                                                          
 Photo cleanup tool. Recursively deletes unnecessary JPG files in a folder when a matching RAW file with extensions ['.ARW','.DNG','.NEF','.RAW'] exists                                                  
                                                                                                                                                                                                          
╭─ Arguments ────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────╮
│   startdir      [STARTDIR]  [default: ./]                                                                                                                                                              │
╰────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────╯
╭─ Options ──────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────╮
│ --dry-run               --no-dry-run      [default: no-dry-run]                                                                                                                                        │
│ --install-completion                      Install completion for the current shell.                                                                                                                    │
│ --show-completion                         Show completion for the current shell, to copy it or customize the installation.                                                                             │
│ --help                                    Show this message and exit.                                                                                                                                  │
╰────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────╯
```