semvec/pypi-packages huggingface dataset:
gtfparse-transcript-transformer 2.5.0
Parsing library for extracting data frames of genomic features from GTF files
Requires Python: >=3.7

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gtfparse
========
Parsing tools for GTF (gene transfer format) files.

# Example usage

## Parsing all rows of a GTF file into a Pandas DataFrame

```python
from gtfparse import read_gtf

# returns GTF with essential columns such as "feature", "seqname", "start", "end"
# alongside the names of any optional keys which appeared in the attribute column
df = read_gtf("gene_annotations.gtf")

# filter DataFrame to gene entries on chrY
df_genes = df[df["feature"] == "gene"]
df_genes_chrY = df_genes[df_genes["seqname"] == "Y"]
```


## Getting gene FPKM values from a StringTie GTF file

```python
from gtfparse import read_gtf

df = read_gtf(
    "Transcripts.gtf",
    column_converters={"FPKM": float})

gene_fpkms = {
    gene_name: fpkm
    for (gene_name, fpkm, feature)
    in zip(df["seqname"], df["FPKM"], df["feature"])
    if feature == "gene"
}
```
LinkedList-utils 0.1.0
A powerful custom LinkedList implementation with advanced methods.
Requires Python: >=3.7

# LinkedList

A powerful and extensible implementation of a singly linked list in Python.

This `LinkedList` class supports standard linked list operations as well as advanced functional-style utilities such as `map`, `filter`, `reduce`, slicing, merging, sorting, and more. Itâ€™s perfect for learning data structures or using in custom projects that need a flexible list alternative.

---

## ðŸš€ Features

- `append`, `push`, `pop`, `insertBefore`, `insertAfter`, `removeByValue`
- Functional methods: `map`, `filteredList`, `reduceList`
- Utilities: `clone`, `reverse`, `contains`, `toList`, `fromList`, `detail`, `clear`
- Slicing: `sliceLinkedList(start, end)`
- Sorting: `sortedList(mode="asc|desc|random|reverse")`
- Pythonic magic methods: `__len__`, `__str__`, `__iter__`, `__getitem__`, `__setitem__`
- Deep merge and deduplication
- Works with loops, indexing, and native functions like `len()`

---

## ðŸ“¦ Installation

```bash
pip install linkedlist