aecroscopy 0.0.2
Acquisition software for microscopy developed at CNMS ORNL
License: MIT

# AEcroscopy

In this branch we are attempting to create a version of AEcroscopy that will be compatible with Blusky, the control software for instrumentation that was developed for synchrotrons at Brookhaven National Lab. You can find the tutorial for Bluesky here
https://blueskyproject.io/bluesky/main/tutorial.html#the-runengine

Based on our initial meeting on March 25th, we found that to refactor AEcroscopy into Bluesky, we first need to 
- create a device (python object) for our FPGA device, that will be compatible withe Bluesky. As an example, use the notebook Bluesky_tutorial_device. But instead of setting up the AFM as the device, set up the FPGA as the device, because this will be more general for AEcroscopy.
- Then once this is done, for message passing, we can develop a simple Run Engine that will map so-called 'plans' for experiments - essentially, dictionaries that tell what to do when it parses the plans for experiments. This is how Bluesky programs experiments. Zijie has an example in a notebook that we can follow.
- This will solve the communication aspects. We will tackle the data backeneds at a later time.


## Getting started

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```
cd existing_repo
git remote add origin https://code.ornl.gov/rvv/aecroscopy.git
git branch -M main
git push -uf origin main
```

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***

# Editing this README

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