semvec/pypi-packages huggingface dataset:
spectrum-fundamentals 0.9.0
Fundamental functions, annotation pipeline and constants for oktoberfest
License: MIT
Requires Python: <3.14.0,>=3.10

Spectrum Fundamentals
=====================

|PyPI| |Python Version| |License| |Read the Docs| |Build| |Tests| |Codecov| |pre-commit| |Black|

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   :alt: Read the documentation at https://spectrum-fundamentals.readthedocs.io/
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   :target: https://github.com/wilhelm-lab/spectrum_fundamentals/actions?workflow=Tests
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   :target: https://codecov.io/gh/wilhelm-lab/spectrum_fundamentals
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.. |Black| image:: https://img.shields.io/badge/code%20style-black-000000.svg
   :target: https://github.com/psf/black
   :alt: Black

spectrum_fundamentals is a package primarily developed for usage within the rescoring and spectral library generation pipeline oktoberfest (https://github.com/wilhelm-lab/oktoberfest).

It provides the following functionalities:
 -  conversion between search engine-specific modstrings and the ProForma standard
 -  calculation of theoretical peptide / ion masses
 -  annotation of spectra
 -  spectral similarity calculation with various metrics