semvec/pypi-packages huggingface dataset:
pybedlite 1.1.0
Lightweight Python interfaces for reading, writing, and querying genomic regions (BED)
Requires Python: <4.0,>=3.9

# pybedlite

[![CI][ci-img]][ci-link]
[![Python Versions][py-img]][py-link]
[![MyPy Checked][mypy-img]][mypy-link]
[![uv][uv-img]][uv-link]
[![Ruff][ruff-img]][ruff-link]

[![PyPI Release][pypi-img]][pypi-link]
[![Install with Bioconda][bioconda-img]][bioconda-link]
[![PyPI download total][downloads-img]][downloads-link]
[![DOI][doi-img]][doi-link]

[ci-img]: https://github.com/fulcrumgenomics/pybedlite/actions/workflows/python_package.yml/badge.svg?branch=main
[ci-link]: https://github.com/fulcrumgenomics/pybedlite/actions/workflows/python_package.yml?query=branch%3Amain
[py-img]: https://img.shields.io/badge/python-3.9_|_3.10_|_3.11_|_3.12_|_3.13-blue
[py-link]: https://www.python.org/
[mypy-img]: http://www.mypy-lang.org/static/mypy_badge.svg
[mypy-link]: http://mypy-lang.org/
[uv-img]: https://img.shields.io/endpoint?url=https://raw.githubusercontent.com/astral-sh/uv/main/assets/badge/v0.json
[uv-link]: https://docs.astral.sh/uv/
[ruff-img]: https://img.shields.io/endpoint?url=https://raw.githubusercontent.com/astral-sh/ruff/main/assets/badge/v2.json
[ruff-link]: https://docs.astral.sh/ruff/

[pypi-img]: https://badge.fury.io/py/pybedlite.svg
[pypi-link]: https://badge.fury.io/py/pybedlite
[bioconda-img]: https://img.shields.io/badge/Install%20with-bioconda-brightgreen.svg
[bioconda-link]: http://bioconda.github.io/recipes/pybedlite/README.html
[downloads-img]: https://img.shields.io/pypi/dm/pybedlite
[downloads-link]: https://pypi.python.org/pypi/pybedlite
[doi-img]: https://zenodo.org/badge/442541029.svg
[doi-link]: https://doi.org/10.5281/zenodo.11223166

Lightweight Python interfaces for reading, writing, and querying genomic regions (BED).

See documentation on [pybedlite.readthedocs.org](http://pybedlite.readthedocs.org/en/stable).

## Installation

```console
pip install pybedlite
```

## Development and Testing

See the [contributing guide](./CONTRIBUTING.md) for more information.

## Built by Fulcrum

<p>
  <a href="https://fulcrumgenomics.com">
    <img src=".github/logos/fulcrumgenomics.svg" alt="Fulcrum Genomics" height="100"/>
  </a>
</p>

[Visit us at Fulcrum Genomics][fulcrum-link] to learn more about how we can power your Bioinformatics with `pybedlite` and beyond.

<a href="mailto:contact@fulcrumgenomics.com?subject=[GitHub inquiry]">
  <img src="https://img.shields.io/badge/Email_us-brightgreen.svg?&style=for-the-badge&logo=gmail&logoColor=white"/>
</a>
<a href="https://www.fulcrumgenomics.com">
  <img src="https://img.shields.io/badge/Visit_Us-blue.svg?&style=for-the-badge&logo=wordpress&logoColor=white"/>
</a>

[fulcrum-link]: https://www.fulcrumgenomics.com