semvec/pypi-packages huggingface dataset:
python-vectorspace 0.0.7
Directory file watcher for automatically creating and querying vector embeddings.
Requires Python: >=3.12

# vectorspace

## Run

```bash
pipx run python-vectorspace
```

## Connect as MCP server

```json
{
  "vectorspace": {
    "args": [
      "run",
      "--spec",
      "python-vectorspace==0.0.6",
      "vectorspace-mcp"
    ],
    "command": "pipx"
  }
}
```

## Development

```bash
uv run vectorspace
```

or

```bash
uv pip install -e .
```

and then

```bash
vectorspace
```

### Formatting

```bash
uvx ruff format
uvx ruff check --fix
```

## API docs

```
http://localhost:8000/docs
```
staphscope 0.2.1
Unified MLST + spa + SCCmec typing tool for Staphylococcus aureus
Requires Python: >=3.7
Keywords: staphylococcus aureus typing mlst spa sccmec bioinformatics

## Citation

If you use Staphscope Typing Tool in your research, please cite it as:

Brown, B. (2025). Staphscope Typing Tool: Unified MLST + spa + SCCmec typing for Staphylococcus aureus. GitHub repository. https://github.com/bbeckley-hub/staphscope-typing-tool

# Staphscope Typing Tool

A unified MLST + spa + SCCmec typing tool for *Staphylococcus aureus*.

## Features

- Multi-locus sequence typing (MLST)
- spa typing
- SCCmec typing using CGE SCCmecFinder
- Parallel processing for high-throughput analysis
- Comprehensive reporting in multiple formats

## Installation

### Using Conda (Recommended)
```bash
conda create -n staphscope -c bioconda -c conda-forge blast python=3.8
conda activate staphscope
pip install staphscope
sudo apt-get staphscope