semvec/pypi-packages huggingface dataset:
tarhash 0.1.0
Hashes the entries in a tarfile without extracting them
Requires Python: >=3.9
Keywords: checksum, hash, tar

# tarhash
Hashes the entries in a tarfile without extracting them.

The user interface could use some polish, but the actual functionality works excellently.

Supports all the hash functions and compression formats that Python does. By default, includes features to support zstd (on old python versions), [blake3], [xxhash].

[blake3]: https://github.com/BLAKE3-team/BLAKE3
[xxhash]: https://xxhash.com

## License
Licensed under either the [Apache 2.0 License](./LICENSE-APACHE.txt) or [MIT License](./LICENSE-MIT.txt) at your option.

Unless you explicitly state otherwise, any contribution intentionally submitted for inclusion in this project by you, as defined in the Apache-2.0 license, shall be dual licensed as above, without any additional terms or conditions.
bio-pype 2.0.99rc0
Management and development framework for bioinformatics pipelines
Requires Python: >=3.4

BIO pype
========

A Python Framework for Bioinformatics Pipeline Management
------------------------------------------------------------

Bio_pype provides a comprehensive framework for building, organizing, and standardizing
bioinformatics tools and pipelines. Built on Python's robust argparse_ module, it offers
both command-line accessibility and programmatic flexibility.

Key Features
------------

- Modular pipeline construction
- Environment management integration (Environment Modules_, Docker_, etc.)
- Multiple queue system support (MOAB_Torque_, SLURM, etc.)
- Version-controlled configurations
- Reproducible execution environments

Installation
------------

**From PyPI**

::

    pip install bio_pype

**Development Version**

::

    git clone https://bitbucket.org/ffavero/bio_pype
    cd bio_pype
    python setup.py test
    python setup.py install

Basic Usage
-----------

Available Commands::

    $ pype

    usage: pype [-p PROFILE]
                {compute_bio,pipelines,profiles,repos,resume,snippets,validate}
                ...

    A python pipeliens manager oriented for bioinformatics

    positional arguments:
        compute_bio     Test and monitor compute.bio API integration
        pipelines       Execute pipeline workflows
        profiles        Manage execution profiles
        repos           Manage pype modules
        resume          Resume a previous pipeline run
        snippets        Execute individual snippet tasks
        validate        Validate bio_pype modules (snippets, profiles,
                        pipelines)

    options:
    -p PROFILE, --profile PROFILE
                        Choose the pype profile from the available options (see
                        pype profiles). Default: None

    This is version 2.0.99b - Francesco Favero - 22 December 2025


Advanced Configuration
----------------------

Environment variables allow custom module locations::

    # Use local snippets
    export PYPE_SNIPPETS=path/to/snippets
    pype snippets

    # Use local pipelines
    export PYPE_PIPELINES=path/to/pipelines
    pype pipelines

For complete documentation, visit our `Read the Docs`_ site.

.. _argparse: https://docs.python.org/3/library/argparse.html
.. _Modules: http://modules.sourceforge.net
.. _Docker: https://www.docker.com
.. _MOAB_Torque: http://www.adaptivecomputing.com
.. _Read the Docs: http://bio-pype.readthedocs.io