candl-like 2.2.0
Differentiable Likelihood for CMB Analysis
Requires Python: >=3.9

.. image:: https://github.com/Lbalkenhol/candl/raw/main/docs/logos/candl_wordmark&symbol_col_RGB.png
    :width: 800

.. |docsshield| image:: https://img.shields.io/readthedocs/candl
   :target: http://candl.readthedocs.io

.. |arxivshield| image:: https://img.shields.io/badge/arXiv-2401.13433-b31b1b.svg
   :target: https://arxiv.org/abs/2401.13433

CMB Analysis With A Differentiable Likelihood
===============================================================

:Authors: L\. Balkenhol, C\. Trendafilova, K\. Benabed, S\. Galli

:Paper: |arxivshield|

:Source: `<https://github.com/Lbalkenhol/candl>`__

:Documentation: |docsshield|

candl is a differentiable likelihood framework for analysing CMB power spectrum measurements.
Key features are:

* JAX-compatibility, allowing for fast and easy computation of gradients and Hessians of the likelihoods.
* The latest public data releases from the South Pole Telescope and Atacama Cosmology Telescope collaborations.
* Interface tools for work with other popular cosmology software packages (e.g. Cobaya and MontePython).
* Auxiliary tools for common analysis tasks (e.g. generation of mock data).

candl supports the analysis of primary CMB and lensing power spectrum data (:math:`TT`, :math:`TE`, :math:`EE`, :math:`BB`, :math:`\phi\phi`, :math:`\kappa\kappa`).

Installation
------------

candl can be installed with pip::

    pip install candl-like

or alternatively you can clone and ``pip install .`` this repository.

Data Sets
------------

candl data sets are kept separately from the code. There currently exist three online libraries with compatible data:

* `spt_candl_data <https://github.com/SouthPoleTelescope/spt_candl_data>`__: official repository of the South Pole Telescope collaboration.
* `candl_data <https://github.com/lbalkenhol/candl_data>`__: repository of CMB data sets re-implemented in candl.
* `clipy <https://github.com/benabed/clipy>`__: 2018 Planck likelihoods available through a wrapper with the python, JAX-friendly clipy implementation.

Together these provide access to the following data:

.. list-table::
   :header-rows: 1
   :widths: 20 15 20

   * - Data set
     - Library
     - Papers

   * - SPT-3G D1 T&E
     - `spt_candl_data <https://github.com/SouthPoleTelescope/spt_candl_data>`__
     - | `Camphuis et al. 2025 <https://arxiv.org/abs/2506.20707>`__

       Quan et al. 2025 (in prep.)

   * - SPT-3G D1 BB
     - | `spt_candl_data <https://github.com/SouthPoleTelescope/spt_candl_data>`__

       lite version: `candl_data <https://github.com/lbalkenhol/candl_data>`__
     - `Zebrowski et al. 2025 <https://arxiv.org/abs/2505.02827>`__

   * - SPT-3G 2018 TT/TE/EE
     - `candl_data <https://github.com/lbalkenhol/candl_data>`__
     - | `Balkenhol et al. 2023 <https://arxiv.org/abs/2212.05642>`__

       `Dutcher et al. 2021 <https://arxiv.org/abs/2101.01684>`__

   * - SPT-3G 2018 :math:`\phi\phi`
     - `candl_data <https://github.com/lbalkenhol/candl_data>`__
     - `Pan et al. 2023 <https://arxiv.org/abs/2308.11608>`__

   * - SPTpol BB
     - `candl_data <https://github.com/lbalkenhol/candl_data>`__
     - `Sayre et al. 2020 <https://arxiv.org/abs/1910.05748>`__

   * - Planck 2018 likelihoods
     - `clipy <https://github.com/benabed/clipy>`__
     - `Planck 2018 V <https://arxiv.org/abs/1907.12875>`__

   * - ACT DR6 TT/TE/EE
     - `candl_data <https://github.com/lbalkenhol/candl_data>`__
     - | `Naess et al. 2025 <https://arxiv.org/abs/2503.14451>`__
       
       | `Louis et al. 2025 <https://arxiv.org/abs/2503.14452>`__
       
       `Calabrese et al. 2025 <https://arxiv.org/abs/2503.14454>`__

   * - ACT DR6 :math:`\phi\phi`
     - `candl_data <https://github.com/lbalkenhol/candl_data>`__
     - | `Madhavacheril et al. 2023 <https://arxiv.org/abs/2304.05203>`__
       
       `Qu et al. 2023 <https://arxiv.org/abs/2304.05202>`__

   * - ACT DR4 TT/TE/EE
     - `candl_data <https://github.com/lbalkenhol/candl_data>`__ 
     - | `Aiola et al. 2020 <https://arxiv.org/abs/2007.07288>`__
       
       `Choi et al. 2020 <https://arxiv.org/abs/2007.07289>`__

Detailed, installation instructions for the data sets can be found on the dedicated repo pages, but in short, for the ``spt_candl_data`` and the ``candl_data`` libraries you navigate to where you would like to store the data and then run::

    git clone https://github.com/SouthPoleTelescope/spt_candl_data.git
    cd spt_candl_data
    pip install .

or::

    git clone https://github.com/Lbalkenhol/candl_data.git
    cd candl_data
    pip install .

Instructions on how you can add your own data sets can be found `in the docs <https://candl.readthedocs.io/en/latest/data/data_overview.html>`__.

JAX
---

`JAX <https://github.com/google/jax>`__ is a Google-developed python library.
In its own words: *"JAX is Autograd and XLA, brought together for high-performance numerical computing."*

candl is written in a JAX-friendly way.
That means JAX is optional and you can install and run candl without JAX and perform traditional inference tasks such as MCMC sampling with Cobaya.
However, if JAX is installed, the likelihood is fully differentiable thanks to automatic differentiation and many functions are jitted for speed.

Packages and Versions
---------------------------

candl has been built on python ``3.10``.
You may be able to get it running on ``3.9``, but this is not officially supported - run it at your own risk.

candl has been tested on JAX versions ``0.5.1``, ``0.4.31``, and ``0.4.24``.

Documentation
--------------

You can find the documentation `here <http://candl.readthedocs.io>`_.

Citing candl
--------------

If you use candl please cite the `release paper <https://arxiv.org/abs/2401.13433>`_. Be sure to also cite the relevant papers for any samplers, theory codes, and data sets you use.

===================

.. |cnrs| image:: https://github.com/Lbalkenhol/candl/raw/main/logos/cnrs_logo.jpeg
   :alt: CNRS
   :height: 100px
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.. |erc| image:: https://github.com/Lbalkenhol/candl/raw/main/logos/erc_logo.jpeg
   :alt: ERC
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.. |NEUCosmoS| image:: https://github.com/Lbalkenhol/candl/raw/main/logos/neucosmos_logo.png
   :alt: NEUCosmoS
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   :width: 159px

.. |IAP| image:: https://github.com/Lbalkenhol/candl/raw/main/logos/IAP_logo.png
   :alt: IAP
   :height: 100px
   :width: 149px

.. |Sorbonne| image:: https://github.com/Lbalkenhol/candl/raw/main/logos/sorbonne_logo.jpeg
   :alt: Sorbonne
   :height: 100px
   :width: 248px

|cnrs| |erc| |NEUCosmoS| |IAP| |Sorbonne|