semvec/pypi-packages huggingface dataset:
flair-brookslab 3.0.0
FLAIR is a long-read transcriptomics model building and analysis package
License: BSD 3-clause
Requires Python: <3.13,>=3.12

# flair
FLAIR (Full-Length Alternative Isoform analysis of RNA) for the correction, isoform definition, and alternative splicing analysis of noisy reads. FLAIR has primarily been used for nanopore cDNA, native RNA, and PacBio sequencing reads.

## FLAIR Announce Mailing list
**If you are using FLAIR, please subscribe to the FLAIR mailing list:**

<https://groups.google.com/a/ucsc.edu/g/flair-announce-group>

This is a read-only, low volume list that will only have announcement of new
FLAIR releases, publications and other FLAIR-related user information.

## Documentation

The complete Flair manual is available via [readthedocs](https://flair.readthedocs.io/en/latest/)

## Cite FLAIR <a name="cite"></a>
If you use or discuss FLAIR, please cite the following [paper](https://www.nature.com/articles/s41467-020-15171-6):
>Tang, A.D., Soulette, C.M., van Baren, M.J. et al. Full-length transcript characterization of SF3B1 mutation in chronic lymphocytic leukemia reveals downregulation of retained introns. Nat Commun 11, 1438 (2020). https://doi.org/10.1038/s41467-020-15171-6