rudyvdbrink/CitationDatabase huggingface dataset:
Object recognition is enabled by an experience-dependent appraisal of visual features in the brain's value system.
NeuroImage, 2020

This paper addresses perceptual synthesis by comparing responses evoked by visual stimuli before and after they are recognized, depending on prior exposure. Using magnetoencephalography, we analyzed distributed patterns of neuronal activity - evoked by Mooney figures - before and after they were recognized as meaningful objects. Recognition induced changes were first seen at 100-120 ​ms, for both faces and tools. These early effects - in right inferior and middle occipital regions - were characterized by an increase in power in the absence of any changes in spatial patterns of activity. Within a later 210-230 ​ms window, a quite different type of recognition effect appeared. Regions of the brain's value system (insula, entorhinal cortex and cingulate of the right hemisphere for faces and right orbitofrontal cortex for tools) evinced a reorganization of their neuronal activity without an overall power increase in the region. Finally, we found that during the perception of disambiguated face stimuli, a face-specific response in the right fusiform gyrus emerged at 240-290 ​ms, with a much greater latency than the well-known N170m component, and, crucially, followed the recognition effect in the value system regions. These results can clarify one of the most intriguing issues of perceptual synthesis, namely, how a limited set of high-level predictions, which is required to reduce the uncertainty when resolving the ill-posed inverse problem of perception, can be available before category-specific processing in visual cortex. We suggest that a subset of local spatial features serves as partial cues for a fast re-activation of object-specific appraisal by the value system. The ensuing top-down feedback from value system to visual cortex, in particular, the fusiform gyrus enables high levels of processing to form category-specific predictions. This descending influence of the value system was more prominent for faces than for tools, the fact that reflects different dependence of these categories on value-related information.
Is wearing a face mask safe for people with epilepsy?
Acta neurologica Scandinavica, 2020

Since December 2019, the world has been experiencing a catastrophic pandemic of coronavirus disease (COVID-19) caused by SARS-CoV-2. This virus primarily targets the human respiratory system. Available information suggests that people with epilepsy (PWE) are not at higher risk of being infected by the virus, nor of more severe COVID-19 manifestations, as a result of the epilepsy alone. However, COVID-19 is a serious disease that currently has no effective treatment or vaccine. A face mask is probably effective in preventing the spread of a respiratory pathogen, at least to some extent. So, should we recommend wearing a face mask to all during a pandemic of respiratory infectious disease (eg, COVID-19) without any precautions or exemptions? While concrete evidence is lacking, if we consider that wearing a face mask may simulate hyperventilation, at least to some extent, we would probably avoid recommending this practice indiscriminately to all PWE. On the other hand, in the absence of any proven treatment or vaccine to combat COVID-19, prevention is the best available strategy and it is probably not reasonable to suggest avoid wearing face masks in PWE under any circumstances. Logically, PWE do not need to wear a face mask most of the time, as long as there is no close contact with others, especially during intense physical activities such as exercise. To the contrary, it is probably more advantageous to wear a face mask in crowded locations, with intermittent breaks in safe locations, away from others.
Modulating disease-relevant tau oligomeric strains by small molecules.
The Journal of biological chemistry, 2020

The pathological aggregation of tau plays an important role in Alzheimer's disease and many other related neurodegenerative diseases, collectively referred to as tauopathies. Recent evidence has demonstrated that tau oligomers, small and soluble prefibrillar aggregates, are highly toxic due to their strong ability to seed tau misfolding and propagate the pathology seen across different neurodegenerative diseases. We previously showed that novel curcumin derivatives affect preformed tau oligomer aggregation pathways by promoting the formation of more aggregated and nontoxic tau aggregates. To further investigate their therapeutic potential, we have extended our studies o disease-relevant brain-derived tau oligomers (BDTOs). Herein, using well-characterized BDTOs, isolated from brain tissues of different tauopathies, including Alzheimer's disease, progressive supranuclear palsy, and dementia with Lewy bodies, we found that curcumin derivatives modulate the aggregation state of BDTOs by reshaping them and rescue neurons from BDTO-associated toxicity. Interestingly, compound CL3 showed an effect on the aggregation pattern of BDTOs from different tauopathies, resulting in the formation of less neurotoxic larger tau aggregates with decreased hydrophobicity and seeding propensity. Our results lay the groundwork for potential investigations of the efficacy and beneficial effects of CL3 and other promising compounds for the treatment of tauopathies. Furthermore, CL3 may aid in the development of tau imaging agent for the detection of tau oligomeric strains and differential diagnosis of the tauopathies, thus enabling earlier interventions.
It's about time: Delay-dependent forgetting of item- and contextual-information.
Cognition, 2020

Once fiercely rejected, the notion of delay-dependent forgetting from long-term memory has recently resurfaced. By this notion, the duration of the study-test delay predicts the magnitude of memory degradation. Our Representation Theory of Forgetting adopts the notion of delay-dependent forgetting, alongside interference due to similarity of representations as an additional cause of forgetting-rather than its sole cause, as has been largely argued in the past. This theory maintains that the causes of forgetting depend on the underlying memory representations. Because hippocampus-based memory representations are relatively distinct from one another, by the virtue of being associated with distinct contexts, they are not as likely as non-hippocampus representations to be forgotten due to interference from similar memories. Instead, as neurobiological evidence suggests, these representations may be forgotten over the passage of time. Thus, contextual-information should be particularly sensitive to delay-dependent forgetting in comparison to item-information. In the current study we tested this hypothesis by comparing the effects of short study-test delay (~2 min) to long delay (~15 min) on forgetting. In three experiments using three different memory paradigms, we obtained various measures of item- and contextual-information. Results converged to support our predictions: whereas most measures of contextual-information showed forgetting over time, item-information was less affected by delay and, at times, was not affected at all. Finally, different patterns of time-dependent forgetting of contextual-information were observed in recall and recognition, in line with the different roles of context in these tests. Our results provide novel evidence for the specific effects of delay on hippocampus-based, contextual memory representations.
Improving Glucose Homeostasis after Parathyroidectomy for Normocalcemic Primary Hyperparathyroidism with Co-Existing Prediabetes.
Nutrients, 2020

We have previously described increased fasting plasma glucose levels in patients with normocalcemic primary hyperparathyroidism (NPHPT) and co-existing prediabetes, compared to prediabetes per se. This study evaluated the effect of parathyroidectomy (PTx) (Group A), versus conservative follow-up (Group B), in a small cohort of patients with co-existing NPHPT and prediabetes. Sixteen patients were categorized in each group. Glycemic parameters (levels of fasting glucose (fGlu), glycosylated hemoglobin (HbA1c), and fasting insulin (fIns)), the homeostasis model assessment for estimating insulin secretion (HOMA-B) and resistance (HOMA-IR), and a 75-g oral glucose tolerance test were evaluated at baseline and after 32 weeks for both groups. Measurements at baseline were not significantly different between Groups A and B, respectively: fGlu (119.4 ± 2.8 vs. 118.2 ± 1.8 mg/dL,
Consciousness reduced: The role of the 'idiot' in early evolutionary psychology.
History of the human sciences, 2020

A conception of the idiotic mind was used to substantiate late 19th-century theories of mental evolution. A new school of animal/comparative psychologists attempted from the 1870s to demonstrate that evolution was a mental as well as a physical process. This intellectual enterprise necessitated the closure, or narrowing, of the 'consciousness gap' between human and animal species. A concept of a quasi-non-conscious human mind, set against conscious intention and ability in higher animals, provided an explanatory framework for the human-animal continuum and the evolution of consciousness. The article addresses a significant lacuna in the historiographies of intellectual disability, animal science, and evolutionary psychology, where the application of a conception of human idiocy to advance theories of consciousness evolution has not hitherto been explored. These ideas retain contemporary resonance in ethology and cognitive psychology, and in the theory of 'speciesism', outlined by Peter Singer in
Mechanisms of perceptual learning: Prolonged intermixed preexposure reduces the effectiveness of the unique and the common elements.
Journal of experimental psychology. Animal learning and cognition, 2021

In three experiments, rats were given intermixed or blocked preexposure to two similar compound stimuli, AX and BX. In Experiment 1, following preexposure, animals were given appetitive conditioning training with the compound AX. A subsequent generalization test showed better discrimination between AX and BX in the group given intermixed than in the one given blocked preexposure. Experiments 2 and 3 assessed the nature of the learning mechanisms underlying this instance of the perceptual learning effect. Experiment 2 assessed the associability of the common and unique elements (X and A); animals in the group given intermixed preexposure showed poorer conditioning with both the X and the A elements than those given blocked preexposure. Experiment 3 further assessed the perceptual effectiveness of the distinctive element A using a superimposition test (the capacity of A to interfere with the conditioned response commanded by an independent conditioned stimulus). The results showed, in line with the outcome of Experiment 2, that the unique element A is more salient following blocked than intermixed preexposure. These results are discussed by reference to current theories of perceptual learning. (PsycInfo Database Record (c) 2021 APA, all rights reserved).
Long-term development of white matter fibre density and morphology up to 13 years after preterm birth: A fixel-based analysis.
NeuroImage, 2020

It is well documented that infants born very preterm (VP) are at risk of brain injury and altered brain development in the neonatal period, however there is a lack of long-term, longitudinal studies on the effects of VP birth on white matter development over childhood. Most previous studies were based on voxel-averaged, non-fibre-specific diffusion magnetic resonance imaging (MRI) measures, such as fractional anisotropy. In contrast, the novel diffusion MRI analysis framework, fixel-based analysis (FBA), enables whole-brain analysis of microstructural and macrostructural properties of individual fibre populations at a sub-voxel level. We applied FBA to investigate the long-term implications of VP birth and associated perinatal risk factors on fibre development in childhood and adolescence.
Genome-Wide Analysis of Copy Number Variation in Latin American Parkinson's Disease Patients.
Movement disorders : official journal of the Movement Disorder Society, 2021

Parkinson's disease is the second most common neurodegenerative disorder and affects people from all ethnic backgrounds, yet little is known about the genetics of Parkinson's disease in non-European populations. In addition, the overall identification of copy number variants at a genome-wide level has been understudied in Parkinson's patients. The objective of this study was to understand the genome-wide burden of copy number variants in Latinos and its association with Parkinson's disease.
Inhibition of endogenous blood glutamate oxaloacetate transaminase enhances the ischemic damage.
Translational research : the journal of laboratory and clinical medicine, 2021

Glutamate oxaloacetate transaminase 1 (GOT1) enzyme plays a critical role in the cell metabolism by participating in the carbohydrate and amino acid metabolism. In ischemic stroke, we have demonstrated that recombinant GOT1 acts as a novel neuroprotective treatment against the excess of extracellular glutamate that accumulates in the brain following ischemic stroke. In this study, we investigated the inhibitory effect of GOT1 on brain metabolism and on the ischemic damage in a rat model of ischemic stroke by means of a specific antibody developed against this enzyme. Inhibition of GOT1 caused higher brain glutamate and lactate levels and this response was associated with larger ischemic lesion. This study represents the first demonstration that the inhibition of the blood GOT1 activity leads to more severe ischemic damage and poorer outcome and supports the protective role of GOT1 against ischemic insults.
Automatic change detection and spatial attention: a visual mismatch negativity study.
The European journal of neuroscience, 2020

Visual mismatch negativity (vMMN) is the electrophysiological correlate of automatic detection of unattended changes in the visual environment. However, vMMNs' relatedness to spatial attention has not been explicitly tested. Thus, the aim of the study was to investigate the effects of spatial attention on the vMMN event-related potential component. To this end, participants were instructed to fixate and attend to task-related stimuli. In an oddball sequence, offset stimuli were applied, i.e., from time-to time, the two sides of permanently presented objects disappeared. Distance between the task-related and unrelated events resulted in the typical finding of spatial attention; the amplitude of the N1 component was larger at the shorter distance between the two kinds of events. VMMN was elicited by the deviant vanishing parts, with no reliable effect of distance between the task-field and vMMN-related stimuli. In terms of the difference potentials, vMMN was followed by a positive posterior component in the 270-330 ms range. This positivity was much larger when the task-field was close to vMMN-related stimuli. The reappearance of the vanishing parts was also investigated. The reappearance of the whole objects after a deviant offset elicited vMMN but only when the task-field was close to the oddball sequence. We concluded that infrequently vanishing parts of objects are detected automatically. However, these deviant events initiate orientation only if the objects are close to the field of task-relevant events. Similarly, automatic registration of the rare but expected events are registered only in the visual field close to the focus of attention.
Transcription-based drug repurposing for COVID-19.
Virus research, 2020

We have utilised the transcriptional response of lung epithelial cells following infection by the original Severe Acute Respiratory Syndrome coronavirus (SARS) to identify repurposable drugs for COVID-19. Drugs best able to recapitulate the infection profile are highly enriched for antiviral activity. Nine of these have been tested against SARS-2 and found to potently antagonise SARS-2 infection/replication, with a number now being considered for clinical trials. It is hoped that this approach may serve to broaden the spectrum of approved drugs that should be further assessed as potential anti-COVID-19 agents and may help elucidate how this seemingly disparate collection of drugs are able to inhibit SARS-2 infection/replication.
Mesenchymal stromal cells reprogram monocytes and macrophages with processing bodies.
Stem cells (Dayton, Ohio), 2021

Mesenchymal stromal cells (MSCs) are widely used in clinical trials because of their ability to modulate inflammation. The success of MSCs has been variable over 25 years, most likely due to an incomplete understanding of their mechanism. After MSCs are injected, they traffic to the lungs and other tissues where they are rapidly cleared. Despite being cleared, MSCs suppress the inflammatory response in the long term. Using human cord tissue-derived MSCs (hCT-MSCs), we demonstrated that hCT-MSCs directly interact and reprogram monocytes and macrophages. After engaging hCT-MSCs, monocytes and macrophages engulfed cytoplasmic components of live hCT-MSCs, then downregulated gene programs for antigen presentation and costimulation, and functionally suppressed the activation of helper T cells. We determined that low-density lipoprotein receptor-related proteins on monocytes and macrophages mediated the engulfment of hCT-MSCs. Since a large amount of cellular information can be packaged in cytoplasmic RNA processing bodies (p-bodies), we generated p-body deficient hCT-MSCs and confirmed that they failed to reprogram monocytes and macrophages in vitro and in vivo. hCT-MSCs suppressed an inflammatory response caused by a nasal lipopolysaccharide challenge. Although both control and p-body deficient hCT-MSCs were engulfed by infiltrating lung monocytes and macrophages, p-body deficient hCT-MSCs failed to suppress inflammation and downregulate MHC-II. Overall, we identified a novel mechanism by which hCT-MSCs indirectly suppressed a T-cell response by directly interacting and reprogramming monocytes and macrophages via p-bodies. The results of this study suggest a novel mechanism for how MSCs can reprogram the inflammatory response and have long-term effects to suppress inflammation.
Comparative efficacies of fluoxetine and paroxetine in major depression across varying acute-phase treatment periods: a meta-analysis.
Asia-Pacific psychiatry : official journal of the Pacific Rim College of Psychiatrists, 2014

Previous studies have shown that varying acute-phase treatment periods of fluoxetine and paroxetine can result in varying antidepressive effects. We therefore did a meta-analysis to ascertain the efficacy of fluoxetine versus paroxetine for depression by varying acute-phase treatment periods.
Fluoxetine rescues rotarod motor deficits in Mecp2 heterozygous mouse model of Rett syndrome via brain serotonin.
Neuropharmacology, 2020

Motor skill is a specific area of disability of Rett syndrome (RTT), a rare disorder occurring almost exclusively in girls, caused by loss-of-function mutations of the X-linked methyl-CpG-binding protein2 (MECP2) gene, encoding the MECP2 protein, a member of the methyl-CpG-binding domain nuclear proteins family. Brain 5-HT, which is defective in RTT patients and Mecp2 mutant mice, regulates motor circuits and SSRIs enhance motor skill learning and plasticity. In the present study, we used heterozygous (Het) Mecp2 female and Mecp2-null male mice to investigate whether fluoxetine, a SSRI with pleiotropic effects on neuronal circuits, rescues motor coordination deficits. Repeated administration of 10 mg/kg fluoxetine fully rescued rotarod deficit in Mecp2 Het mice regardless of age, route of administration or pre-training to rotarod. The motor improvement was confirmed in the beam walking test while no effect was observed in the hanging-wire test, suggesting a preferential action of fluoxetine on motor coordination. Citalopram mimicked the effects of fluoxetine, while the inhibition of 5-HT synthesis abolished the fluoxetine-induced improvement of motor coordination. Mecp2 null mice, which responded poorly to fluoxetine in the rotarod, showed reduced 5-HT synthesis in the prefrontal cortex, hippocampus and striatum, and reduced efficacy of fluoxetine in raising extracellular 5-HT as compared to female mutants. No sex differences were observed in the ability of fluoxetine to desensitize 5-HT
Programmable Nanodisc Patterning by DNA Origami.
Nano letters, 2020

Nanodiscs (ND) are soluble phospholipid bilayers bounded by membrane scaffold proteins; they have become invaluable in the study of membrane proteins. However, this multifunctional tool has been used individually, and applications involving multiple NDs and their interactions have fallen far behind their counterpart membrane model system: liposomes. One major obstacle is the lack of reliable methods to manage the spatial arrangement of NDs. Here we sought to extend the utility of NDs by organizing them on DNA origami. NDs constructed with DNA-anchor amphiphiles were placed precisely and specifically into these DNA nanostructures via hybridization. Four different tethering strategies were explored and validated. A variety of geometric patterns of NDs were successfully programmed on origami, as evidenced by electron microscopy. The ND ensembles generated in this study provide new and powerful platforms to study protein-lipid or protein-protein interactions with spatial control of membranes.
New tool to tackle Alzheimer's disease: amyloid-β protofibril-selective antibody AbSL: An Editorial Highlight for 'The conformational epitope for a new Aβ42 protofibril-selective antibody partially overlaps with the peptide N-terminal region' on page 736.
Journal of neurochemistry, 2017

This Editorial highlights a study by Colvin et al. (2017) in the current issue of Journal of Neurochemistry, in which the authors describe the development and characterisation of a new rabbit antibody (termed antibody St. Louis; AbSL) that preferentially recognises amyloid-β (Aβ) protein 42 (Aβ42) protofibrils over other Aβ species.
Fluency: A trigger of familiarity for relational representations?
The Behavioral and brain sciences, 2020

According to Bastin et al.'s integrative memory model, familiarity may be attributed to both entity representations and relational representations. However, the model does not specify what triggers familiarity for relational representations. I argue that fluency is a key player in the attribution of familiarity regardless of the type of representation. Two lines of evidence are reviewed in support of my claim.
Dysregulated Lipid Metabolism Precedes Onset of Psychosis.
Biological psychiatry, 2021

A key clinical challenge in the management of individuals at clinical high risk for psychosis (CHR) is that it is difficult to predict their future clinical outcomes. Here, we investigated if the levels of circulating molecular lipids are related to adverse clinical outcomes in this group.