rpgv/AptaCom huggingface dataset:
Aptamer: E2
Aptamer chemistry: ssRNA
Aptamer sequence: GGGAUGUUCUAGGCGGUUGAUGAUUUGGGGUGUCGGGCGAUUUUUAGGGUUGGGCCAGGCCGUCAUCCAGAGUAGCAUAAUUGAUCCGA
Target: Amyloid beta-peptide (Aβ)
Affinity: Kd: 10.9 μM, 10900
Reference: https://pubmed.ncbi.nlm.nih.gov/19668864/
Aptamer: TV01
Aptamer chemistry: ssDNA
Aptamer sequence: ATCGTCTGCTCCGTCCAATAGTGCATTGAAACTTCTGCATCCTCGTTTGGTGTGAGGTCGTGC
Target: Vaccinia virus–infected lung cancer A549 cells
Affinity: Kd: 7.3 ± 1.4 nM, 7,3
Reference: https://pubmed.ncbi.nlm.nih.gov/19246617/
Aptamer: TV02
Aptamer chemistry: ssDNA
Aptamer sequence: ATCGTCTGCTCCGTCCAATACCTGCATATACACTTTGCATGTGGTTTGGTGTGAGGTCGTGC
Target: Vaccinia virus–infected lung cancer A549 cells
Affinity: Kd: 3.6 ± 0.48 nM, 3,6
Reference: https://pubmed.ncbi.nlm.nih.gov/19246617/
Aptamer: TV03
Aptamer chemistry: ssDNA
Aptamer sequence: ATCGTCTGCTCCGTCCAATAGCGTGCATTGGTTTACTGCATCCGTGAAACTGGGCTTTGGTGTGAGGTCGTGC
Target: Vaccinia virus–infected lung cancer A549 cells
Affinity: Kd: 4.1 ± 0.59 nM, 4,1
Reference: https://pubmed.ncbi.nlm.nih.gov/19246617/
Aptamer: TV04
Aptamer chemistry: ssDNA
Aptamer sequence: ATCGTCTGCTCCGTCCAATAAACCTGCATAATTTATAAGTCTAGACTGCTGCATTTGGTGTGAGGTCGTGC
Target: Vaccinia virus–infected lung cancer A549 cells
Affinity: Kd: 6.5 ± 0.94 nM, 6,5
Reference: https://pubmed.ncbi.nlm.nih.gov/19246617/
Aptamer: TV05
Aptamer chemistry: ssDNA
Aptamer sequence: ATCGTCTGCTCCGTCCAATAGCCTCACCCTGCATAATTTATAGACTACACTTAGGAATCGCTGCATTTGGTGTGAGGTCGTGC
Target: Vaccinia virus–infected lung cancer A549 cells
Affinity: Kd: 4.1 ± 0.44 nM, 4,1
Reference: https://pubmed.ncbi.nlm.nih.gov/19246617/
Aptamer: TV06
Aptamer chemistry: ssDNA
Aptamer sequence: ATCGTCTGCTCCGTCCAATAGGACCGATAGGAACCACGGACTGCATGTTTCTGCATTTGACGTGGTTTGGTGTGAGGTCGTGC
Target: Vaccinia virus–infected lung cancer A549 cells
Affinity: Kd: 6.5 ± 1.3 nM, 6,5
Reference: https://pubmed.ncbi.nlm.nih.gov/19246617/
Aptamer: TV07
Aptamer chemistry: ssDNA
Aptamer sequence: ATCGTCTGCTCCGTCCAATATCCGAGCAAGAACTCATATTGCATTATTTATAGCTACGCGCTGCATTTGGTGTGAGGTCGTGC
Target: Vaccinia virus–infected lung cancer A549 cells
Affinity: Kd: 11.7 ± 2.9 nM, 11,9
Reference: https://pubmed.ncbi.nlm.nih.gov/19246617/
Aptamer: TV08
Aptamer chemistry: ssDNA
Aptamer sequence: ATCGTCTGCTCCGTCCAATATGATGACACCTGCATAATTTATAGTGAGTCTTGATTCACGCTGCATTTGGTGTGAGGTCGTGC
Target: Vaccinia virus–infected lung cancer A549 cells
Affinity: Kd: 2.7 ± 6.2 nM, 2,7
Reference: https://pubmed.ncbi.nlm.nih.gov/19246617/
Aptamer: E21
Aptamer chemistry: 2'-fluoro-RNA
Aptamer sequence: GGGAGGACGAUGCGGUACCAAGAUCCCACAACUAGCCGACCACAAUUGCCGGCCACAGACGACUCGCUGAGGAUCCGAGA
Target: Histidine-tagged epidermal growth factor receptor variant III (EGFRvIII) ectodomain
Affinity: Kd: 33 nM, 33
Reference: https://pubmed.ncbi.nlm.nih.gov/19040357/
Aptamer: E17
Aptamer chemistry: 2'-fluoro-RNA
Aptamer sequence: GGGAGGACGAUGCGGACCAAAAUCAACGCAAAGAGCGCGCCUGCACGUCACCUCACAGACGACUCGCUGAGGAUCCGAGA
Target: Histidine-tagged epidermal growth factor receptor variant III (EGFRvIII) ectodomain
Affinity: Kd: 50 nM, 50
Reference: https://pubmed.ncbi.nlm.nih.gov/19040357/
Aptamer: KH1C12
Aptamer chemistry: ssDNA
Aptamer sequence: ATCCAGAGTGACGCAGCATGCCCTAGTTACTACTACTCTTTTTAGCAAACGCCCTCGCTTTGGACACGGTGGCTTAGT
Target: Acute myeloid leukemia cells (HL60)
Affinity: Kd: 4.5± 1.6 nM, 4,5
Reference: https://pubmed.ncbi.nlm.nih.gov/19151784/
Aptamer: KHG11
Aptamer chemistry: ssDNA
Aptamer sequence: ATCCAGAGTGACGCAGCATGCTCATCCACGATTCTGGCGAATTTAGTGCCTGTCTTTTTCTCTTGGACACGGTGGCTTAGT
Target: Acute myeloid leukemia cells (HL60)
Affinity: Kd: 6.1 + 2.1 nM, 6,1
Reference: https://pubmed.ncbi.nlm.nih.gov/19151784/
Aptamer: KH2B05
Aptamer chemistry: ssDNA
Aptamer sequence: ATCCAGAGTGACGCAGCACACACAACCTGCTCATAAACTTTACTCTGCTCGAACCATCTCTGGACACGGTGGCTTAGT
Target: Acute myeloid leukemia cells (HL60)
Affinity: Kd: 184.5 ± 20.2 nM, 184,6
Reference: https://pubmed.ncbi.nlm.nih.gov/19151784/
Aptamer: KH1A02
Aptamer chemistry: ssDNA
Aptamer sequence: ATCCAGAGTGACGCAGCAGGCATAGATGTGCAGCTCCAAGGAGAAGAAGGAGTTCTGTGTATTGGACACGGTGGCTTAGT
Target: Acute myeloid leukemia cells (HL60)
Affinity: Kd: 106.1 ± 15.4 nM, 106,1
Reference: https://pubmed.ncbi.nlm.nih.gov/19151784/
Aptamer: KK1B10
Aptamer chemistry: ssDNA
Aptamer sequence: ATCCAGAGTGACGCAGCAGATCAGTCTATCTTCTCCTGATGGGTTCCTATTTATAGGTGAAGCTGGACACGGTGGCTTAGT
Target: Acute myeloid leukemia cells (HL60)
Affinity: Kd: 256.0 ± 72.0 nM, 256
Reference: https://pubmed.ncbi.nlm.nih.gov/19151784/
Aptamer: KK1D04
Aptamer chemistry: ssDNA
Aptamer sequence: ATCCAGAGTGACGCAGCACAAAGTCTCTTCGGCGCGAATCAGTTCATCTTTCCCTGATGGGGGTGGACACGGTGGCTTAGT
Target: Acute myeloid leukemia cells (HL60)
Affinity: Kd: 204.6 ± 48.4 nM, 204,6
Reference: https://pubmed.ncbi.nlm.nih.gov/19151784/
Aptamer: WT-15
Aptamer chemistry: ssRNA
Aptamer sequence: GGGAGGACGAUGCGGAUCAACUCACCGUAGGUCUAGUGAGAACUUCAAGUCUACUCAGACGACUCGCUGAGGAUCC
Target: Serine protease inhibitor plasminogen activator inhibitor-1 (PAI-1)
Affinity: Kd: 177 pM, 0,177
Reference: https://pubmed.ncbi.nlm.nih.gov/19284310/
Aptamer: SM-20
Aptamer chemistry: ssRNA
Aptamer sequence: GGGAGGACGAUGCGGAGCGACUGACGAUCUUGAGUAAACCGCUCAUCCACGUAGUCAGACGACUCGCUGAGGAUCC
Target: Serine protease inhibitor plasminogen activator inhibitor-1 (PAI-1)
Affinity: Kd: 920 pM, 0,92
Reference: https://pubmed.ncbi.nlm.nih.gov/19284310/
Aptamer: BC15
Aptamer chemistry: ssDNA
Aptamer sequence: GCAATGGTACGGTACTTCCTGTGGCGAGGTAGGTGGGGTGTGTGTGTATCCAAAAGTGCACGCTACTTTGCTAA
Target: Heterogeneous nuclear ribonucleoprotein A1 (hnRNP A1)
Affinity: Kd: 111.0 ± 36.9 nM, 111
Reference: https://pubmed.ncbi.nlm.nih.gov/19291713/
Aptamer: BC-15
Aptamer chemistry: ssDNA
Aptamer sequence: GCAATGGTACGGTACTTCCTGTGGCGAGGTAGGTGGGGTGTGTGTGTATCCAAAAGTGCACGCTACTTTGCTAA
Target: Circulating tumor cells (CTCs)
Affinity: Kd: 111.0 ± 36.9 nM, 111
Reference: https://pubmed.ncbi.nlm.nih.gov/25799539/
Aptamer: RNA11F7t
Aptamer chemistry: 2'-fluoro-RNA
Aptamer sequence: GAGAG2FC2FC2FC2FCAG2FCGAGA2FUAA2FUA2FC2FU2FUGG2FC2FC2FC2FCG2FC2FU2FC2FU2FUidU
Target: Factor Xa
Affinity: Kd: 1.1 ± 0.2 nM, 1,1
Reference: https://pubmed.ncbi.nlm.nih.gov/20022942/
Aptamer: 13.56
Aptamer chemistry: ssDNA
Aptamer sequence: TACTAACGGTACAAGCTACACACCCGCCCCGCTCCATCCGCCCATCGTCACCTACCCACCTCGTGATCCCCTTCCCCCAACGTTGACCTAGAAGC
Target: Immunoglobulin E (IgE)-binding epitope of Asp f 1 allergen
Affinity: Kd 93.62 ± 21.84 nM, 93,62
Reference: https://pubmed.ncbi.nlm.nih.gov/19545545/
Aptamer: 13.63
Aptamer chemistry: ssDNA
Aptamer sequence: TACTAACGGTACAAGCTAGCCCACCAGAACACCCCGTCCCATCGACCTCCCTCCTCATATCCCTGCCCCTCTGCCTCCAACGTTGACCTAGAAGC
Target: Immunoglobulin E (IgE)-binding epitope of Asp f 1 allergen
Affinity: Not Mentioned in Database
Reference: https://pubmed.ncbi.nlm.nih.gov/19545545/
Aptamer: 13.78
Aptamer chemistry: ssDNA
Aptamer sequence: TACTAACGGTACAAGCTACAAACCCCAACGCACGTACACCTGTCTCCCGCACTAGTTCCCCCTCATGACTGCCCTCCCAACGTTGACCTAGAAGC
Target: Immunoglobulin E (IgE)-binding epitope of Asp f 1 allergen
Affinity: Not Mentioned in Database
Reference: https://pubmed.ncbi.nlm.nih.gov/19545545/
Aptamer: No. 8
Aptamer chemistry: ssDNA
Aptamer sequence: TAGGGAATTCGTCGACGGATCCCCCCTATAGTGAGTCGTATTAAATCCATATGACTAGTAGATCCTCTAGAGTCGACCTCTGCAGGTCGACGCATGCGCCG
Target: 8-hydroxy-2′-deoxyguanosine (8-OHdG)
Affinity: Not Mentioned in Database
Reference: https://pubmed.ncbi.nlm.nih.gov/19450981/
Aptamer: No. 11
Aptamer chemistry: ssDNA
Aptamer sequence: TAGGGAATTCGTCGACGGATCCGCGTCGACCTGCAGACCCCCATATCATCAGTCCCACCCCCAGGCACAGAGCGCCGTACCCCCCTGCAGGTCGACGCATGCGCCG
Target: 8-hydroxy-2′-deoxyguanosine (8-OHdG)
Affinity: Not Mentioned in Database
Reference: https://pubmed.ncbi.nlm.nih.gov/19450981/
Aptamer: No. 22
Aptamer chemistry: ssDNA
Aptamer sequence: TAGGGAATTCGTCGACGGATCCGCGGGCGATCGGCGGGGGGTGCGTGCGCTCTGTGCCAGGGGGTGGGACAGATCATATGGGGGTGCTCTGCAGGTCGACGCATGCGCCG
Target: 8-hydroxy-2′-deoxyguanosine (8-OHdG)
Affinity: Kd: 0.1 μmol/L, 1000
Reference: https://pubmed.ncbi.nlm.nih.gov/19450981/
Aptamer: Ars-3
Aptamer chemistry: ssDNA
Aptamer sequence: GGTAATACGACTCACTATAGGGAGATACCAGCTTATTCAATTTTACAGAACAACCAACGTCGTCTCCGGGTACTTCTTCATCGAGATAGTAAGTGCAATCT
Target: Arsenate [(As(V)]
Affinity: Kd: 4.95± 0.31 nM, 4,95
Reference: https://pubmed.ncbi.nlm.nih.gov/20000526/
Aptamer: Ars-3
Aptamer chemistry: ssDNA
Aptamer sequence: GGTAATACGACTCACTATAGGGAGATACCAGCTTATTCAATTTTACAGAACAACCAACGTCGTCTCCGGGTACTTCTTCATCGAGATAGTAAGTGCAATCT
Target: Arsenite [As(III)]
Affinity: Kd: 7.05 ± 0.91 nM , 7,05
Reference: https://pubmed.ncbi.nlm.nih.gov/20000526/
Aptamer: b02
Aptamer chemistry: 2'-fluoro-RNA
Aptamer sequence: CGACUGCAGAGCUUGCUACGUAGCUCACCACACCAGCAAUCAACGCGUUUUUUCAAACACUGGCACAUGAGGUACCGAGCUCGAAUUCCC
Target: Plasmodium falciparum (P. falciparum) erythrocyte membrane protein 1 (PfEMP1)
Affinity: Not Mentioned in Database
Reference: https://pubmed.ncbi.nlm.nih.gov/19693540/
Aptamer: d12
Aptamer chemistry: 2'-fluoro-RNA
Aptamer sequence: CGACUGCAGAGCUUGCUACGAACAAUACGACUACACCAUCAAAAGUAUUAUCUUGCAUCGAAGGUUGGCAGGUACCGAGCUCGAAUUCCC
Target: Plasmodium falciparum (P. falciparum) erythrocyte membrane protein 1 (PfEMP1)
Affinity: Not Mentioned in Database
Reference: https://pubmed.ncbi.nlm.nih.gov/19693540/
Aptamer: e05
Aptamer chemistry: 2'-fluoro-RNA
Aptamer sequence: CGACUGCAGAGCUUGCUACGGUGACCACGCGGAUAAAUGAAUCAAAAACAACAACCAGGGCCGUUCGACUACGCUAAUUAUCCCGGGUACCGAGCUCGAAUUCCC
Target: Plasmodium falciparum (P. falciparum) erythrocyte membrane protein 1 (PfEMP1)
Affinity: Not Mentioned in Database
Reference: https://pubmed.ncbi.nlm.nih.gov/19693540/
Aptamer: aptamer 1
Aptamer chemistry: ssRNA
Aptamer sequence: GGGAGAGCGGAAGCGUGCUGGGCCUGUCGUUCGCUGUCUUGCUACGUUACGUUACACGGUUGGCAUAACCCAGAGGUCGAUGG
Target: SARS-CoV nucleocapsid (N) protein
Affinity: Kd: 1.65 ± 0.41 nM, 1,65
Reference: https://pubmed.ncbi.nlm.nih.gov/19684916/
Aptamer: D10/DA24
Aptamer chemistry: ssDNA
Aptamer sequence: ATACCAGCTTATTCAATTACACACCGAGACCGCACTTGTACTCCCTAGCCGCCTCCGTAGATAGTAAGTGCAATCT
Target: Diclofenac (DCF)
Affinity: Kd: 100.64 nM, 100,64
Reference: https://pubmed.ncbi.nlm.nih.gov/19604698/
Aptamer: D22
Aptamer chemistry: ssDNA
Aptamer sequence: ATACCAGCTTATTCAATTGGCAGTAGGTGTACATGCAAAGCCAGTGTGGGTCCCTGTGTAGATAGTAAGTGCAATCT
Target: Diclofenac (DCF)
Affinity: Kd: 166.34 nM, 166,34
Reference: https://pubmed.ncbi.nlm.nih.gov/19604698/
Aptamer: D16
Aptamer chemistry: ssDNA
Aptamer sequence: ATACCAGCTTATTCAATTGCCCGGCAACAGGTTGTGACATGCCAGTGCGAGACCGCCCGAGATAGTAAGTGCAATCT
Target: Diclofenac (DCF)
Affinity: Kd: 148.73 nM, 148,73
Reference: https://pubmed.ncbi.nlm.nih.gov/19604698/
Aptamer: D3
Aptamer chemistry: ssDNA
Aptamer sequence: ATACCAGCTTATTCAATTGCAACGTGGCGGTCAGTCAGCGGGTGGTGGGTTCGGTCCAGATAGTAAGTGCAATCT
Target: Diclofenac (DCF)
Affinity: Kd: 42.7 nM, 42,7
Reference: https://pubmed.ncbi.nlm.nih.gov/19604698/
Aptamer: Aptamer 32, 34
Aptamer chemistry: ssDNA
Aptamer sequence: TAATACGACTCACTATAGCAATGGTACGGTACTTCCTATAACGCCCGTGTTGCTCGGTTATCAAAAGTGCACGCTACTTTG
Target: Streptavidin
Affinity: Kd: 69.277 ± 4.323 nM, 69,277
Reference: https://pubmed.ncbi.nlm.nih.gov/19352549/
Aptamer: Aptamer 29
Aptamer chemistry: ssDNA
Aptamer sequence: TAATACGACTCACTATAGCAATGGTACGGTACTTCCAGATACGCtCGTGTTGCTCGATAGCCAAAAGTGCACGCTACTTTG
Target: Streptavidin
Affinity: Kd: 94.228 ± 5.443 nM, 94,228
Reference: https://pubmed.ncbi.nlm.nih.gov/19352549/
Aptamer: Aptamer 30
Aptamer chemistry: ssDNA
Aptamer sequence: TAATACGACTCACTATAGCAATGGTACGGTACTTCCCGACGCACCGATCGCAGGTTCGGGACAAAAGTGCACGCTACTTTG
Target: Streptavidin
Affinity: Kd: 104.265 ± 5.688 nM, 104,265
Reference: https://pubmed.ncbi.nlm.nih.gov/19352549/
Aptamer: MT32
Aptamer chemistry: ssDNA
Aptamer sequence: AGCCTCGTCTGTTCTCCCGGGGTGGTGGGTTCTTTTTGTGGTATTGGTGTGGGGGGCAGGGAAGACAAGCAGACGT
Target: Virus coat protein of two apple stem pitting virus (ASPV) isolates: MT32 and PSA‐H
Affinity: Kd: 55 nM for MT32 protein & 83 nM for PSA‐H protein, both via SPR, 55
Reference: https://pubmed.ncbi.nlm.nih.gov/20624933/
Aptamer: PSA‐H
Aptamer chemistry: ssDNA
Aptamer sequence: AGCCTCGTCTGTTCTCCCAGCAAGGTTTGGTGTTGGTTGGTTGCTGGTTTTGGTTTCGGGAAGACAAGCAGACGT
Target: Virus coat protein of two apple stem pitting virus (ASPV) isolates: MT32 and PSA‐H
Affinity: Kd: 8.0 nM for PSA‐H protein & 290 nM for MT32 protein, both via SPR, 8
Reference: https://pubmed.ncbi.nlm.nih.gov/20624933/
Aptamer: Apta 5A
Aptamer chemistry: ssDNA
Aptamer sequence: AGCAGCACAGAGGTCAGTTCGTCCATTATTCTGGTAGCGTTGAACAACATTCAACACGCCCCTATGCGTGCTACCGTGAA
Target: 17 beta-Estradiol (17β-Estradiol) (E2）
Affinity: Kd: 27 μM, 27000
Reference: https://pubmed.ncbi.nlm.nih.gov/25465478/
Aptamer: Apta 6A
Aptamer chemistry: ssDNA
Aptamer sequence: AGCAGCACAGAGGTCAGTTCGTCGAATCAGCACCTCTGCATAGGTTACGTTTATACTGCGCCTATGCGTGCTACCGTGAA
Target: 17 beta-Estradiol (17β-Estradiol) (E2）
Affinity: Kd: 36 μM, 36000
Reference: https://pubmed.ncbi.nlm.nih.gov/25465478/
Aptamer: Apta 8A
Aptamer chemistry: ssDNA
Aptamer sequence: AGCAGCACAGAGGTCAGTTCAGCGTCCTCTGCATAGTGATTTACGCTATGTGTACAGTGCCCTATGCGTGCTACCGTGAA
Target: 17 beta-Estradiol (17β-Estradiol) (E2）
Affinity: Kd: 124 μM, 124000
Reference: https://pubmed.ncbi.nlm.nih.gov/25465478/
Aptamer: Apta 9A
Aptamer chemistry: ssDNA
Aptamer sequence: AGCAGCACAGAGGTCAGTTCCATGACTCTGCATAGGTCTAATGAAACTAGTTCTTATTTACCTATGCGTGCTACCGTGAA
Target: 17 beta-Estradiol (17β-Estradiol) (E2）
Affinity: Kd: 52 μM, 52000
Reference: https://pubmed.ncbi.nlm.nih.gov/25465478/
Aptamer: Apta 11A
Aptamer chemistry: ssDNA
Aptamer sequence: AGCAGCACAGAGGTCAGTTCCAAGTCGTACGACACAGGGTAATCCTGTTTGGTAAAACGACCTATGCGTGCTACCGTGAA
Target: 17 beta-Estradiol (17β-Estradiol) (E2）
Affinity: Kd: 51 μM, 51000
Reference: https://pubmed.ncbi.nlm.nih.gov/25465478/
Aptamer: Apta 13A
Aptamer chemistry: ssDNA
Aptamer sequence: AGCAGCACAGAGGTCAGTTCTTATGTCGAACTAAATTTGGCCTGACCAAGCCGAATTTGACCTATGCGTGCTACCGTGAA
Target: 17 beta-Estradiol (17β-Estradiol) (E2）
Affinity: Kd: 63 μM, 63000
Reference: https://pubmed.ncbi.nlm.nih.gov/25465478/
Aptamer: Apta 1B
Aptamer chemistry: ssDNA
Aptamer sequence: TGTGTGTGAGACTTCGTTCCGGCGATGGGGTAGGGGGTGTGGAGGGGCCGGACGGAGGGGCAGCAAGGCATCAGAGGTAT
Target: 17 beta-Estradiol (17β-Estradiol) (E2）
Affinity: Kd: 0.9 μM, 900
Reference: https://pubmed.ncbi.nlm.nih.gov/25465478/
Aptamer: Apta 19B
Aptamer chemistry: ssDNA
Aptamer sequence: TGTGTGTGAGACTTCGTTCCCCCGGTCGGTGGGGTAGGGGGCGTGGAGTCACCGGGGGGGCAGCAAGGCATCAGAGGTAT
Target: 17 beta-Estradiol (17β-Estradiol) (E2）
Affinity: Kd: 6 μM, 6000
Reference: https://pubmed.ncbi.nlm.nih.gov/25465478/
Aptamer: Apt10L
Aptamer chemistry: ssRNA
Aptamer sequence: GAAGCUUGGGAAUUCGAGCUCCUGACAGCAGGACCCUCACCUCGGUGAUGAUGGAGGGGCGCAAGGUUAACCGCCUCAGGGUCCUCGAUUCGAAGACGUCCAGCUGAUCUAGAUUCUAUAGUGUCACCUAAAU
Target: Sulforhodamine analogue (ASR) fluorogen
Affinity: Kd: 39.1 ± 7.6 μM (if purified with a G-25 column without denaturing and renaturing subsequent to in vitro transcription), 3.5 ± 1.5 μM (if purified using 6% polyacrylamide-7M urea gel) , 39100
Reference: https://pubmed.ncbi.nlm.nih.gov/20809562/
Aptamer: Apt10T3 (88mer)
Aptamer chemistry: ssRNA
Aptamer sequence: GGACAGCAGGACCCUCACCUCGGUGAUGAUGGAGGGGCGCAAGGUUAACCGCCUCAGGGUCCUCGACUCGAAGACGUCCAGCUGAUCC
Target: Sulforhodamine analogue (ASR) fluorogen
Affinity: Kd: 26.9 ± 2.2 uM, 26900
Reference: https://pubmed.ncbi.nlm.nih.gov/20809562/
Aptamer: aptamer 807
Aptamer chemistry: ssDNA
Aptamer sequence: CTTCTGCCCGCCTCCTTCCGATTGAAAGGTCTGTTTTTGGGGTTGGTTTGGGTCAATAGGAGACGAGATAGGCGGACACT
Target: Recombinant human erythropoietin-alpha (rHuEPO-α)
Affinity: Kd: 82 ± 32 nM, 82
Reference: https://pubmed.ncbi.nlm.nih.gov/20971648/
Aptamer: C13
Aptamer chemistry: ssRNA
Aptamer sequence: GGGAAUGGAUCCACAUCUACUGUGAUCAAUUUGGCAAUCCGCCACACGAGACUGCAGACUUGACGAAGCUU
Target: Protein tyrosine phosphatase 1B (PTP1B)
Affinity: Ki: 200 pM, nan
Reference: https://pubmed.ncbi.nlm.nih.gov/20572251/
Aptamer: C13M21
Aptamer chemistry: ssRNA
Aptamer sequence: mGAAUUCUGUGAUCAAUUUGGCAAUCCGCCACACGAGUmUsC
Target: Protein tyrosine phosphatase 1B (PTP1B)
Affinity: Ki: 166 nM and 168 nM, nan
Reference: https://pubmed.ncbi.nlm.nih.gov/20572251/
Aptamer: C9
Aptamer chemistry: ssRNA
Aptamer sequence: GGGAAUGGAUCCACAUCUACUGUGAUUAAUUUGGCAAUCCGCCACACUAGACUGCAGACUUGACGAAGCUU
Target: Protein tyrosine phosphatase 1B (PTP1B)
Affinity: Ki: 250 nM, nan
Reference: https://pubmed.ncbi.nlm.nih.gov/20572251/
Aptamer: selected aptamer
Aptamer chemistry: ssDNA
Aptamer sequence: CCACTCCTCCACCTTTGACATGTGTCTGCGGCGTTTTATCATTGGCTACAGCAACAGGGTTAATACGACTCACTATAGCAATGGTACGGTACTTCCAAGCTAACCCTCATCTGCGCGCTCCCAAAAGTGCACGCTACTTTGCTAA
Target: Immunoglobulin G (IgG) Fc fragment, Mouse
Affinity: Reported through qualitiative analysis, nan
Reference: https://pubmed.ncbi.nlm.nih.gov/21067135/
Aptamer: C1
Aptamer chemistry: ssRNA
Aptamer sequence: GGGAAUGGAUCCACAUCUACGAAUUCUACCGUUAUUGGUGUCACCGAAGAUGUUAUUCACUGCAGACUUGACGAAGCUU
Target: Sphingosylphosphorylcholine (SPC)
Affinity: Kd: 20.9 ± 0.19 nM, 20,9
Reference: https://pubmed.ncbi.nlm.nih.gov/20729797/
Aptamer: C2
Aptamer chemistry: ssRNA
Aptamer sequence: GGGAAUGGAUCCACAUCUACGAAUUCUUCCGUUAUUGGAGCCAAGUCGUAUCCCGAUUCACUGCAGACUUGACGAAGCUU
Target: Sphingosylphosphorylcholine (SPC)
Affinity: Kd: 33.2 ± 0.19 nM, 33,2
Reference: https://pubmed.ncbi.nlm.nih.gov/20729797/
Aptamer: C8
Aptamer chemistry: ssRNA
Aptamer sequence: GGAAUGGAUCCACAUCUACGAAUUCGCAUUGUCCGCACGCAAAGCAUUAUUGUGAUUCACUGCAGACUUGACGAAGCUU
Target: Sphingosylphosphorylcholine (SPC)
Affinity: Kd: 90.4 ± 2.35 nM, 90,4
Reference: https://pubmed.ncbi.nlm.nih.gov/20729797/
Aptamer: m009
Aptamer chemistry: ssRNA
Aptamer sequence: GGGAUCCACAUCUACGAAUUCUACCGUUAUUGGUGUCACCGAAGAUGUUAUUCC
Target: Sphingosylphosphorylcholine (SPC)
Affinity: Kd: 186 ± 5.05 nM, 186
Reference: https://pubmed.ncbi.nlm.nih.gov/20729797/
Aptamer: m010
Aptamer chemistry: ssRNA
Aptamer sequence: GGAUCUACGAAUUCUACCGUUAUUGGUGUCACCGAAGAUCC
Target: Sphingosylphosphorylcholine (SPC)
Affinity: Kd: 252 ± 7.04 nM, 252
Reference: https://pubmed.ncbi.nlm.nih.gov/20729797/
Aptamer: m011
Aptamer chemistry: ssRNA
Aptamer sequence: GGGAUCCACAUCUACGAAUUCUUCCGUUAUUGGAGCCAAGUCGUAUCCCGAUUCC
Target: Sphingosylphosphorylcholine (SPC)
Affinity: Kd: 221 ± 4.84 nM, 221
Reference: https://pubmed.ncbi.nlm.nih.gov/20729797/
Aptamer: m012
Aptamer chemistry: ssRNA
Aptamer sequence: GGCGAAUUCUUCCGUUAUUGGAGCCAAGUCGCC
Target: Sphingosylphosphorylcholine (SPC)
Affinity: Kd: 196 ± 2.98 nM, 196
Reference: https://pubmed.ncbi.nlm.nih.gov/20729797/
Aptamer: S132B-C22
Aptamer chemistry: 2'-fluoro-RNA
Aptamer sequence: GGGAGGAGGAGAGAUGUGAACUUGACAGCGUGCCUAGAAGUCCAAGCUUAAAUAACCACGCUCGACAAGCAGAAACUCUACACUGGACUGGCG
Target: Light chain of type A botulinum neurotoxin (BoNT/A) (LCA)
Affinity: Kd: 87 ± 20 nM, 87
Reference: https://pubmed.ncbi.nlm.nih.gov/20452328/
Aptamer: S132B-C12
Aptamer chemistry: 2'-fluoro-RNA
Aptamer sequence: GGGAGGAGGAGAGAUGUGAACUUACAACCCGGAACAACGUCUAACAGUGUACCAUAACCCGGCAUUCAAGAAACUCUACACUGGACUGGCG
Target: Light chain of type A botulinum neurotoxin (BoNT/A) (LCA)
Affinity: Kd: 111 ± 21 nM, 111
Reference: https://pubmed.ncbi.nlm.nih.gov/20452328/
Aptamer: S132B-C11
Aptamer chemistry: 2'-fluoro-RNA
Aptamer sequence: GGGAGGAGGAGAGAUGUGAACUUAUUCGGGCCCAGGAACCAACUAUAUAAAUGUCCCGAAUGCUUCGACGAGAAACUCUACACUGGACUGGCG
Target: Light chain of type A botulinum neurotoxin (BoNT/A) (LCA)
Affinity: Kd: 186 ± 18 nM, 186
Reference: https://pubmed.ncbi.nlm.nih.gov/20452328/
Aptamer: Vap7
Aptamer chemistry: ssDNA
Aptamer sequence: ATACCAGTCTATTCAATTGCACTCTGTGGGGGTGGACGGGCCGGGTAGATAGTATGTGCAATCA
Target: Receptor-binding domain (RBD) of vascular endothelial growth factor 121 (VEGF121)
Affinity: Kd: 1.0 nM, 1
Reference: https://pubmed.ncbi.nlm.nih.gov/20110884/
Aptamer: Vap7
Aptamer chemistry: ssDNA
Aptamer sequence: ATACCAGTCTATTCAATTGCACTCTGTGGGGGTGGACGGGCCGGGTAGATAGTATGTGCAATCA
Target: Receptor-binding domain (RBD) of vascular endothelial growth factor 165 (VEGF165)
Affinity: Kd: 20 nM, 20
Reference: https://pubmed.ncbi.nlm.nih.gov/20110884/
Aptamer: V7t1
Aptamer chemistry: ssDNA
Aptamer sequence: TGTGGGGGTGGACGGGCCGGGTAGA
Target: Receptor-binding domain (RBD) of vascular endothelial growth factor 165 (VEGF165)
Affinity: Kd: 1.4 nM, 1,4
Reference: https://pubmed.ncbi.nlm.nih.gov/20110884/
Aptamer: V7t1
Aptamer chemistry: ssDNA
Aptamer sequence: TGTGGGGGTGGACGGGCCGGGTAGA
Target: Receptor-binding domain (RBD) of vascular endothelial growth factor 121 (VEGF121)
Affinity: Kd: 1.1 nM, 1,1
Reference: https://pubmed.ncbi.nlm.nih.gov/20110884/
Aptamer: PSap4#5
Aptamer chemistry: ssDNA
Aptamer sequence: CATGCTTACCTATAGTGAACTTTATTAGCCTCCCGGAAGAGCACCTCTTTCATGCTTACCTATAGTGAAC
Target: Prostate specific antigen (PSA)
Affinity: Kd: "several tens of nM", nan
Reference: https://pubmed.ncbi.nlm.nih.gov/20692149/
Aptamer: PSap#4-3
Aptamer chemistry: ssDNA
Aptamer sequence: CATGCTTACCTATAGTGAACtttACTTAATGATTTCCCGGTTGTCTCtttCATGCTTACCTATAGTGAAC
Target: Prostate specific antigen (PSA)
Affinity: Kd: "several tens of nM", nan
Reference: https://pubmed.ncbi.nlm.nih.gov/20692149/
Aptamer: PSap#4-4
Aptamer chemistry: ssDNA
Aptamer sequence: CATGCTTACCTATAGTGAACtttCTGGTGTTTATTGTTTACTGTCCCtttCATGCTTACCTATAGTGAAC
Target: Prostate specific antigen (PSA)
Affinity: Kd: "several tens of nM", nan
Reference: https://pubmed.ncbi.nlm.nih.gov/20692149/
Aptamer: PSap#4-6
Aptamer chemistry: ssDNA
Aptamer sequence: CATGCTTACCTATAGTGAACtttCCGCACCGGGTACGTTTTTTGGCCtttCATGCTTACCTATAGTGAAC
Target: Prostate specific antigen (PSA)
Affinity: Kd: "several tens of nM", nan
Reference: https://pubmed.ncbi.nlm.nih.gov/20692149/
Aptamer: PSap#4-9
Aptamer chemistry: ssDNA
Aptamer sequence: CATGCTTACCTATAGTGAACtttAATATCAACTTGCCATCAAATATCtttCATGCTTACCTATAGTGAAC
Target: Prostate specific antigen (PSA)
Affinity: Kd: "several tens of nM", nan
Reference: https://pubmed.ncbi.nlm.nih.gov/20692149/
Aptamer: PSap#4-11
Aptamer chemistry: ssDNA
Aptamer sequence: CATGCTTACCTATAGTGAACtttGTGTTGCCCGGAACGTCGTGGCCCtttCATGCTTACCTATAGTGAAC
Target: Prostate specific antigen (PSA)
Affinity: Kd: "several tens of nM", nan
Reference: https://pubmed.ncbi.nlm.nih.gov/20692149/
Aptamer: 21-E
Aptamer chemistry: ssRNA
Aptamer sequence: GGGAACAGUCCGAGCCUGCGUGCGAGGAGGUGGAGAGGGUGGGUGUGCGUGGCGUGGGGUGAAUUCGUCAUA
Target: Zinc-finger antiviral protein (ZAP)
Affinity: Not Mentioned in Database
Reference: https://pubmed.ncbi.nlm.nih.gov/21203916/
Aptamer: 21-K
Aptamer chemistry: ssRNA
Aptamer sequence: GGGAACAGUCCGAGCCAAGCGGUAGCGUCAGGGGGUGGAGGGAGGAGGCCGCGUGGUGUGGGUGAAUUCGUCAUA
Target: Zinc-finger antiviral protein (ZAP)
Affinity: Not Mentioned in Database
Reference: https://pubmed.ncbi.nlm.nih.gov/21203916/
Aptamer: FB4
Aptamer chemistry: ssRNA
Aptamer sequence: GGGCGAAUUCCGCGUGUGCUGAGGGCGGAAGAACUAAUUUGGGACGGAUUGCGGCCGUUGUCUGUGGCGUCCGUUCGGG
Target: Mouse transferrin receptor (TfR-ECD)
Affinity: Not Mentioned in Database
Reference: https://pubmed.ncbi.nlm.nih.gov/18838694/#:~:text=Endocytosed%20enzyme%2Daptamer%20conjugate%20corrected,aptamer%20in%20receptor%2Dmediated%20endocytosis.
Aptamer: Trp3a-1
Aptamer chemistry: ssDNA
Aptamer sequence: AGCACGTTGGTTAGGTCAGGTTTGGGTTTCGTGC
Target: L-tryptophan
Affinity: Kd: 1.757±0.174 uM, 1757
Reference: https://pubmed.ncbi.nlm.nih.gov/21076782/
Aptamer: IBA 2
Aptamer chemistry: ssDNA
Aptamer sequence: ATACCAGCTTATTCAATTACAGTAGTGAGGGGTCCGTCGTGGGGTAGTTGGGTCGTGGAGATAGTAAGTGCAATCT
Target: (R)-ibuprofen
Affinity: Kd: 3.0 uM, 3000
Reference: https://pubmed.ncbi.nlm.nih.gov/20456958/
Aptamer: IBA 8
Aptamer chemistry: ssDNA
Aptamer sequence: ATACCAGCTTATTCAATTGCGAACGACTTCATAAAATGCTATAAGGTTGCCCTCTGTCAGATAGTAAGTGCAATCT
Target: (R)-ibuprofen
Affinity: Kd: 5.2 uM, 5200
Reference: https://pubmed.ncbi.nlm.nih.gov/20456958/
Aptamer: IBA 12
Aptamer chemistry: ssDNA
Aptamer sequence: ATACCAGCTTATTCAATTGGATCGGCGACGTGGGTGTCGTGATTCGGGGTGAGATAGTAAGTGCAATCT
Target: (R)-ibuprofen
Affinity: Kd: 3.2 uM, 3200
Reference: https://pubmed.ncbi.nlm.nih.gov/20456958/
Aptamer: IBA 4
Aptamer chemistry: ssDNA
Aptamer sequence: ATACCAGCTTATTCAATTCCACAGACCCTTAGCTTTCCTATTATTCTGCGCGACGCTGAGATAGTAAGTGCAATCT
Target: (S)-ibuprofen
Affinity: Kd: 1.5 uM, 1500
Reference: https://pubmed.ncbi.nlm.nih.gov/20456958/
Aptamer: IBA 17
Aptamer chemistry: ssDNA
Aptamer sequence: ATACCAGCTTATTCAATTACAGCGTGGGCGGTGTCGGATTTTCGTATGGATGGGGATGAGATAGTAAGTGCAATCT
Target: (S)-ibuprofen
Affinity: Kd: 3.8 uM, 3800
Reference: https://pubmed.ncbi.nlm.nih.gov/20456958/
Aptamer: Apt 1
Aptamer chemistry: ssDNA
Aptamer sequence: AGCAGCACAGAGGTCAGATGGCAGCTAAGCAGGCGGCTCACAAAACCATTCGCATGCGGCCCTATGCGTGCTACCGTGAA
Target: Egg white lysozyme
Affinity: Kd: 2.8 ± 0.3 nM, 2,8
Reference: https://pubmed.ncbi.nlm.nih.gov/20335968/