renwei2024/nemo-github-issues huggingface dataset:
fix mixtraltopk
State: closed | Pull request: yes
Labels: name: Run CICD

# What does this PR do ?

fix topk 1 -> 2

**Collection**: [Note which collection this PR will affect]

# Changelog 
- Add specific line by line info of high level changes in this PR.

# Usage
* You can potentially add a usage example below

```python
# Add a code snippet demonstrating how to use this 
```

# GitHub Actions CI

The Jenkins CI system has been replaced by GitHub Actions self-hosted runners.

The GitHub Actions CI will run automatically when the "Run CICD" label is added to the PR.
To re-run CI remove and add the label again.
To run CI on an untrusted fork, a NeMo user with write access must first click "Approve and run".

# Before your PR is "Ready for review"
**Pre checks**:
- [ ] Make sure you read and followed [Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md)
- [ ] Did you write any new necessary tests?
- [ ] Did you add or update any necessary documentation?
- [ ] Does the PR affect components that are optional to install? (Ex: Numba, Pynini, Apex etc)
  - [ ] Reviewer: Does the PR have correct import guards for all optional libraries?
  
**PR Type**:
- [ ] New Feature
- [ ] Bugfix
- [ ] Documentation

If you haven't finished some of the above items you can still open "Draft" PR.


## Who can review?

Anyone in the community is free to review the PR once the checks have passed. 
[Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md) contains specific people who can review PRs to various areas.

# Additional Information
* Related to # (issue)
[Nemo Unit Tests] Split CPU unit tests
State: closed | Pull request: yes
Labels: name: CI

name: Run CICD

Split CPU unit tests

![image](https://github.com/user-attachments/assets/c1ed7e2e-3bfd-4489-889d-8a657ca6a1a9)

CI passed

> Can we make the the unit tests required?

done

CI passed https://github.com/NVIDIA/NeMo/actions/runs/10732427046/job/29771216029?pr=10365
Support custom lightning profilers in config
State: closed | Pull request: yes
Labels: name: stale

name: NLP

name: Run CICD

# What does this PR do ?

This PR adds support of defining custom lightning profilers

**Collection**: [Note which collection this PR will affect]

# Changelog 
- Add specific line by line info of high level changes in this PR.

# Usage
To use `PyTorchProfiler` after 100 warm-up steps a user can define trainer.profiler as follows:
```
trainer:
  profiler:
    _target_: pytorch_lightning.profilers.PyTorchProfiler
    schedule:
      _target_: torch.profiler.schedule
      skip_first: 100
      wait: 5
      warmup: 1
      active: 3
      repeat: 2
```

# GitHub Actions CI

The Jenkins CI system has been replaced by GitHub Actions self-hosted runners.

The GitHub Actions CI will run automatically when the "Run CICD" label is added to the PR.
To re-run CI remove and add the label again.
To run CI on an untrusted fork, a NeMo user with write access must first click "Approve and run".

# Before your PR is "Ready for review"
**Pre checks**:
- [x] Make sure you read and followed [Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md)
- [x] Did you write any new necessary tests?
- [x] Did you add or update any necessary documentation?
- [ ] Does the PR affect components that are optional to install? (Ex: Numba, Pynini, Apex etc)
  - [ ] Reviewer: Does the PR have correct import guards for all optional libraries?
  
**PR Type**:
- [x] New Feature
- [ ] Bugfix
- [ ] Documentation

If you haven't finished some of the above items you can still open "Draft" PR.


## Who can review?
@MaximumEntropy @ericharper @ekmb @yzhang123 @VahidooX @vladgets @malay-nagda @mikolajblaz @yaoyu-33 @akoumpa

Anyone in the community is free to review the PR once the checks have passed. 
[Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md) contains specific people who can review PRs to various areas.

# Additional Information
* Related to # (issue)


Thanks @pbelevich, whenever ready please ping me so I can run the CI. 

@akoumpa could you please run the CI? 

@akoumpa I don't know why CI didn't run on this PR

This PR is stale because it has been open for 14 days with no activity. Remove stale label or comment or update or this will be closed in 7 days.

@akoumpa could you please take a look?

This PR is stale because it has been open for 14 days with no activity. Remove stale label or comment or update or this will be closed in 7 days.

This PR was closed because it has been inactive for 7 days since being marked as stale.
Support MCORE Distributed Optimizer
State: closed | Pull request: yes
Labels: name: core

name: NLP

name: Run CICD

name: r2.0.0

# What does this PR do ?

Add the interface and communication hooks for MCORE Distributed Optimizer and data-parallel communications

# Changelog 
- Change the knob name from `overlap_param_sync` to `overlap_param_gather`
- Change the knob name from `delay_param_gather` to `align_param_gather`
- Add `overlap_param_gather_with_optimizer_step` for the overlap of the first param all-gather chunk with optim.step
- Add the interface to enable FP8 parameter all-gather (`fp8_param_gather`)

# Usage
Use the above knobs to enable according features

# GitHub Actions CI

The Jenkins CI system has been replaced by GitHub Actions self-hosted runners.

The GitHub Actions CI will run automatically when the "Run CICD" label is added to the PR.
To re-run CI remove and add the label again.
To run CI on an untrusted fork, a NeMo user with write access must first click "Approve and run".

# Before your PR is "Ready for review"
**Pre checks**:
- [ ] Make sure you read and followed [Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md)
- [ ] Did you write any new necessary tests?
- [ ] Did you add or update any necessary documentation?
- [ ] Does the PR affect components that are optional to install? (Ex: Numba, Pynini, Apex etc)
  - [ ] Reviewer: Does the PR have correct import guards for all optional libraries?
  
**PR Type**:
- [ ] New Feature
- [ ] Bugfix
- [ ] Documentation

If you haven't finished some of the above items you can still open "Draft" PR.


## Who can review?

Anyone in the community is free to review the PR once the checks have passed. 
[Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md) contains specific people who can review PRs to various areas.

# Additional Information
* Related to # (issue)
[NeMo-UX] Add token drop callback and optimize mixtral configs
State: closed | Pull request: yes
Labels: name: Run CICD

name: r2.0.0

# What does this PR do ?

Add a one line overview of what this PR aims to accomplish.

**Collection**: [Note which collection this PR will affect]

# Changelog 
- Add specific line by line info of high level changes in this PR.

# Usage
* You can potentially add a usage example below

```python
# Add a code snippet demonstrating how to use this 
```

# GitHub Actions CI

The Jenkins CI system has been replaced by GitHub Actions self-hosted runners.

The GitHub Actions CI will run automatically when the "Run CICD" label is added to the PR.
To re-run CI remove and add the label again.
To run CI on an untrusted fork, a NeMo user with write access must first click "Approve and run".

# Before your PR is "Ready for review"
**Pre checks**:
- [ ] Make sure you read and followed [Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md)
- [ ] Did you write any new necessary tests?
- [ ] Did you add or update any necessary documentation?
- [ ] Does the PR affect components that are optional to install? (Ex: Numba, Pynini, Apex etc)
  - [ ] Reviewer: Does the PR have correct import guards for all optional libraries?
  
**PR Type**:
- [ ] New Feature
- [ ] Bugfix
- [ ] Documentation

If you haven't finished some of the above items you can still open "Draft" PR.


## Who can review?

Anyone in the community is free to review the PR once the checks have passed. 
[Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md) contains specific people who can review PRs to various areas.

# Additional Information
* Related to # (issue)


LGTM. Thanks!
Finetune recipe
State: closed | Pull request: yes
Labels: name: stale

# What does this PR do ?

SFT and PEFT recipe that matches NeMo 1 configs

**Collection**: [Note which collection this PR will affect]

# Changelog 
- Add specific line by line info of high level changes in this PR.

# Usage
* You can potentially add a usage example below

```python
# Add a code snippet demonstrating how to use this 
```

# GitHub Actions CI

The Jenkins CI system has been replaced by GitHub Actions self-hosted runners.

The GitHub Actions CI will run automatically when the "Run CICD" label is added to the PR.
To re-run CI remove and add the label again.
To run CI on an untrusted fork, a NeMo user with write access must first click "Approve and run".

# Before your PR is "Ready for review"
**Pre checks**:
- [ ] Make sure you read and followed [Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md)
- [ ] Did you write any new necessary tests?
- [ ] Did you add or update any necessary documentation?
- [ ] Does the PR affect components that are optional to install? (Ex: Numba, Pynini, Apex etc)
  - [ ] Reviewer: Does the PR have correct import guards for all optional libraries?
  
**PR Type**:
- [ ] New Feature
- [ ] Bugfix
- [ ] Documentation

If you haven't finished some of the above items you can still open "Draft" PR.


## Who can review?

Anyone in the community is free to review the PR once the checks have passed. 
[Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md) contains specific people who can review PRs to various areas.

# Additional Information
* Related to # (issue)


This PR is stale because it has been open for 14 days with no activity. Remove stale label or comment or update or this will be closed in 7 days.

changes are incorporated in #10645
Fix links
State: closed | Pull request: yes

# What does this PR do ?

Add a one line overview of what this PR aims to accomplish.

**Collection**: [Note which collection this PR will affect]

# Changelog 
- Add specific line by line info of high level changes in this PR.

# Usage
* You can potentially add a usage example below

```python
# Add a code snippet demonstrating how to use this 
```

# GitHub Actions CI

The Jenkins CI system has been replaced by GitHub Actions self-hosted runners.

The GitHub Actions CI will run automatically when the "Run CICD" label is added to the PR.
To re-run CI remove and add the label again.
To run CI on an untrusted fork, a NeMo user with write access must first click "Approve and run".

# Before your PR is "Ready for review"
**Pre checks**:
- [ ] Make sure you read and followed [Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md)
- [ ] Did you write any new necessary tests?
- [ ] Did you add or update any necessary documentation?
- [ ] Does the PR affect components that are optional to install? (Ex: Numba, Pynini, Apex etc)
  - [ ] Reviewer: Does the PR have correct import guards for all optional libraries?
  
**PR Type**:
- [ ] New Feature
- [ ] Bugfix
- [ ] Documentation

If you haven't finished some of the above items you can still open "Draft" PR.


## Who can review?

Anyone in the community is free to review the PR once the checks have passed. 
[Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md) contains specific people who can review PRs to various areas.

# Additional Information
* Related to # (issue)
MoE alltoall
State: closed | Pull request: yes
Labels: name: Run CICD

# What does this PR do ?

Update MoE configs for perf

**Collection**: [llm]

# Changelog 
- Add specific line by line info of high level changes in this PR.

# Usage
* You can potentially add a usage example below

```python
# Add a code snippet demonstrating how to use this 
```

# GitHub Actions CI

The Jenkins CI system has been replaced by GitHub Actions self-hosted runners.

The GitHub Actions CI will run automatically when the "Run CICD" label is added to the PR.
To re-run CI remove and add the label again.
To run CI on an untrusted fork, a NeMo user with write access must first click "Approve and run".

# Before your PR is "Ready for review"
**Pre checks**:
- [ ] Make sure you read and followed [Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md)
- [ ] Did you write any new necessary tests?
- [ ] Did you add or update any necessary documentation?
- [ ] Does the PR affect components that are optional to install? (Ex: Numba, Pynini, Apex etc)
  - [ ] Reviewer: Does the PR have correct import guards for all optional libraries?
  
**PR Type**:
- [ ] New Feature
- [x] Bugfix
- [ ] Documentation

If you haven't finished some of the above items you can still open "Draft" PR.


## Who can review?

Anyone in the community is free to review the PR once the checks have passed. 
[Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md) contains specific people who can review PRs to various areas.

# Additional Information
* Related to # (issue)
Add Nemotron4 (15B and 22B) long context model recipes
State: closed | Pull request: yes
Labels: name: Run CICD

# What does this PR do ?

Add a one line overview of what this PR aims to accomplish.

**Collection**: [Note which collection this PR will affect]

# Changelog 
- Add specific line by line info of high level changes in this PR.

# Usage
* You can potentially add a usage example below

```python
# Add a code snippet demonstrating how to use this 
```

# GitHub Actions CI

The Jenkins CI system has been replaced by GitHub Actions self-hosted runners.

The GitHub Actions CI will run automatically when the "Run CICD" label is added to the PR.
To re-run CI remove and add the label again.
To run CI on an untrusted fork, a NeMo user with write access must first click "Approve and run".

# Before your PR is "Ready for review"
**Pre checks**:
- [ ] Make sure you read and followed [Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md)
- [ ] Did you write any new necessary tests?
- [ ] Did you add or update any necessary documentation?
- [ ] Does the PR affect components that are optional to install? (Ex: Numba, Pynini, Apex etc)
  - [ ] Reviewer: Does the PR have correct import guards for all optional libraries?
  
**PR Type**:
- [x] New Feature
- [ ] Bugfix
- [ ] Documentation

If you haven't finished some of the above items you can still open "Draft" PR.


## Who can review?

Anyone in the community is free to review the PR once the checks have passed. 
[Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md) contains specific people who can review PRs to various areas.

# Additional Information
* Related to # (issue)


Please add some doc-strings to all functions + some tests like outlined in the [ADD-RECIPE.md](https://github.com/NVIDIA/NeMo/blob/main/nemo/collections/llm/recipes/ADD-RECIPE.md)

@marcromeyn I looked through current unit test. Seems like `test_trainer_parallelism_options` is included in `test_trainer` in `test_llama3_8b_16k.py`

Ah yeah good point! Then just please add some doc-strings. We want to treat the recipes as part of our public-API which means we want doc-strings. We are planning to use these doc-strings as well to communicate which recipes we test on an ongoing basis etc.

Closing this in favor of https://github.com/NVIDIA/NeMo/pull/10432
Add FSDP2 for NeMo 2.0
State: closed | Pull request: yes
Labels: name: Run CICD

# What does this PR do ?

Add a one line overview of what this PR aims to accomplish.

**Collection**: [Note which collection this PR will affect]

# Changelog 
- Add specific line by line info of high level changes in this PR.

# Usage
* You can potentially add a usage example below

```python
# Add a code snippet demonstrating how to use this 
```

# GitHub Actions CI

The Jenkins CI system has been replaced by GitHub Actions self-hosted runners.

The GitHub Actions CI will run automatically when the "Run CICD" label is added to the PR.
To re-run CI remove and add the label again.
To run CI on an untrusted fork, a NeMo user with write access must first click "Approve and run".

# Before your PR is "Ready for review"
**Pre checks**:
- [ ] Make sure you read and followed [Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md)
- [ ] Did you write any new necessary tests?
- [ ] Did you add or update any necessary documentation?
- [ ] Does the PR affect components that are optional to install? (Ex: Numba, Pynini, Apex etc)
  - [ ] Reviewer: Does the PR have correct import guards for all optional libraries?
  
**PR Type**:
- [ ] New Feature
- [ ] Bugfix
- [ ] Documentation

If you haven't finished some of the above items you can still open "Draft" PR.


## Who can review?

Anyone in the community is free to review the PR once the checks have passed. 
[Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md) contains specific people who can review PRs to various areas.

# Additional Information
* Related to # (issue)


This is closed because FSDP2 will be supported in megatron core. A separate PR #10545  is created to use the megatron code path (instead of directly from torch).
Continual training error: FileNotFoundError: [Errno 2] No such file or directory: '/tmp/tmpbqgpune1/model_weights/model.decoder.layers.self_attention.linear_proj._extra_state/shard_0_16.pt'
State: closed | Pull request: no

image: nemo 2405 
Continual training model: llama3-8b.nemo

if mcore_gpt set True， 

![Image](https://github.com/user-attachments/assets/2ad02abd-c44a-45e8-a02f-303d596fd997)

why  this files are need, how to find this tmp files?



Can you please show how you solve this problem, thx! I'm encountering this same problem.

FileNotFoundError: [Errno 2] No such file or directory: '/tmp/tmp6d5snvot/model_weights/model.decoder.layers.self_attention.core_attention._extra_state/shard_0_32.pt'


@wittysam hello have you solved the problem im facing the same issue


@SrinivasaGogul No, the problem remains with NeMo version 24.09. But I switched to the older version of 24.07, which works out the problem.

@wittysam yeah, I have also switched to older version it worked. Thanks for the reply.
Bump `Dockerfile.ci` (2024-09-05)
State: closed | Pull request: yes
Labels: name: Run CICD

🚀 PR to Bump `Dockerfile.ci`.  

📝 Please remember the following to-do's before merge: 
- [ ] Verify the presubmit CI  

🙏 Please merge this PR only if the CI workflow completed successfully.

Manually re-run so that mcore commits gets updated to latest commit

CI passed: https://github.com/NVIDIA/NeMo/actions/runs/10725237263
Update README.md
State: closed | Pull request: yes
Labels: name: stale

Fix multiple broken links.

# What does this PR do ?

Add a one line overview of what this PR aims to accomplish.

**Collection**: [Note which collection this PR will affect]

# Changelog 
- Add specific line by line info of high level changes in this PR.

# Usage
* You can potentially add a usage example below

```python
# Add a code snippet demonstrating how to use this 
```

# GitHub Actions CI

The Jenkins CI system has been replaced by GitHub Actions self-hosted runners.

The GitHub Actions CI will run automatically when the "Run CICD" label is added to the PR.
To re-run CI remove and add the label again.
To run CI on an untrusted fork, a NeMo user with write access must first click "Approve and run".

# Before your PR is "Ready for review"
**Pre checks**:
- [ ] Make sure you read and followed [Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md)
- [ ] Did you write any new necessary tests?
- [ ] Did you add or update any necessary documentation?
- [ ] Does the PR affect components that are optional to install? (Ex: Numba, Pynini, Apex etc)
  - [ ] Reviewer: Does the PR have correct import guards for all optional libraries?
  
**PR Type**:
- [ ] New Feature
- [ ] Bugfix
- [ ] Documentation

If you haven't finished some of the above items you can still open "Draft" PR.


## Who can review?

Anyone in the community is free to review the PR once the checks have passed. 
[Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md) contains specific people who can review PRs to various areas.

# Additional Information
* Related to # (issue)


This PR is stale because it has been open for 14 days with no activity. Remove stale label or comment or update or this will be closed in 7 days.

This PR was closed because it has been inactive for 7 days since being marked as stale.
Akoumparouli/nemo ux tokenizer fix
State: closed | Pull request: yes
Labels: name: common

name: Run CICD

# What does this PR do ?
1) make nemo2-ckpts self-contained https://github.com/NVIDIA/NeMo/pull/10351/files#diff-5fed9dcc17cd5128af7ed4f9228d37c1dcaa22bf052620cc0a59d196770d3acaR109 and https://github.com/NVIDIA/NeMo/pull/10351/files#diff-9d41499746a3f28bb941592bb19445c90a0baa974ee59c0c5c8d78eb6ec1db5bR31

2) fix a bug in tokenizer IO https://github.com/NVIDIA/NeMo/pull/10351/files#diff-f9d7e4a01855072a41a91e2a37c117f1a90d933aba0258036eeaabd130fc2b5bL240

3) add tokenizer restoration when loading from nemo2-ckpts https://github.com/NVIDIA/NeMo/pull/10351/files#diff-6cc360fb87bae4067befd052372e537754bdf079589dd10818307a1ba5778735R93
 
llama2, llama3 confirmed to work.

**Collection**: [Note which collection this PR will affect]

# Changelog 
- Add specific line by line info of high level changes in this PR.

# Usage
* You can potentially add a usage example below

```python
# Add a code snippet demonstrating how to use this 
```

# GitHub Actions CI

The Jenkins CI system has been replaced by GitHub Actions self-hosted runners.

The GitHub Actions CI will run automatically when the "Run CICD" label is added to the PR.
To re-run CI remove and add the label again.
To run CI on an untrusted fork, a NeMo user with write access must first click "Approve and run".

# Before your PR is "Ready for review"
**Pre checks**:
- [ ] Make sure you read and followed [Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md)
- [ ] Did you write any new necessary tests?
- [ ] Did you add or update any necessary documentation?
- [ ] Does the PR affect components that are optional to install? (Ex: Numba, Pynini, Apex etc)
  - [ ] Reviewer: Does the PR have correct import guards for all optional libraries?
  
**PR Type**:
- [ ] New Feature
- [ ] Bugfix
- [ ] Documentation

If you haven't finished some of the above items you can still open "Draft" PR.


## Who can review?

Anyone in the community is free to review the PR once the checks have passed. 
[Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md) contains specific people who can review PRs to various areas.

# Additional Information
* Related to # (issue)
Add project section to pyproject.toml
State: closed | Pull request: yes
Labels: name: audio

# What does this PR do ?

In bionemo we're exploring using [`uv`](https://docs.astral.sh/uv/) to handle pinning pypi dependencies in our docker builds. For this to work, we'll need to modernize some of the packaging for NeMo and mcore by adding `project` sections to their pyproject.toml files.

**Collection**: all

# Changelog 
- Adds a [package] section to the pyproject.toml file.

# GitHub Actions CI

The Jenkins CI system has been replaced by GitHub Actions self-hosted runners.

The GitHub Actions CI will run automatically when the "Run CICD" label is added to the PR.
To re-run CI remove and add the label again.
To run CI on an untrusted fork, a NeMo user with write access must first click "Approve and run".

# Before your PR is "Ready for review"
**Pre checks**:
- [x] Make sure you read and followed [Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md)
- [x] Did you write any new necessary tests?
- [x] Did you add or update any necessary documentation?
- [x] Does the PR affect components that are optional to install? (Ex: Numba, Pynini, Apex etc)
  - [ ] Reviewer: Does the PR have correct import guards for all optional libraries?
  
**PR Type**:
- [ ] New Feature
- [ x ] Bugfix
- [ ] Documentation

If you haven't finished some of the above items you can still open "Draft" PR.


## Who can review?

Anyone in the community is free to review the PR once the checks have passed. 
[Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md) contains specific people who can review PRs to various areas.

# Additional Information
* Related to # (issue)


hey @pstjohn, adding support for `uv` should be fine, but this PR has 1300 and 8 changed file - I guess your auto-formatter ran across the whole repo. While such a refactoring PR will most likely come in future - would you mind separating the actual Pyproject.toml change out of this PR? 

Let's handle refactoring and pyproject in separate PRs to make triaging easier in case something breaks

Huh - that's super odd, I don't remember making those commits 😆 . Yeah agreed, I'm not intending to make any formatting suggestions.

**edit**: I think those came from the `reformat_with_isort_and_black`, I must have made a change that caused it to reformat the entire repo. Looks like it's happy with the reduced set of changes now

Completes: https://jirasw.nvidia.com/browse/CDISCOVERY-4417
Remove apply_query_key_layer_scaling for GPT models
State: closed | Pull request: yes
Labels: name: Run CICD

# What does this PR do ?

Remove the `apply_query_key_layer_scaling` in the GPT model configs.
This arg causes annoying issues with `NVTE_APPLY_QK_LAYER_SCALING`.


QK scaling is supposed to used for stability reason for certain models using the formula: `Q * K^T by 1 / layer-number`.

When using TE for attention blocks, This scaling is triggered only when ALL the following criteria is met:
- Training with FP16 precision
- Disable FlashAttention and Disable FusedAttention

For all other cases, the scaling will NOT be used regardless of the flag value is True or False. 

Remove this flag in all GPT models as it pretty much have no effect to all the models (since we rarely use fp16, and rarely not use FA).

**Collection**: [Note which collection this PR will affect]

# Changelog 
- Add specific line by line info of high level changes in this PR.

# Usage
* You can potentially add a usage example below

```python
# Add a code snippet demonstrating how to use this 
```

# GitHub Actions CI

The Jenkins CI system has been replaced by GitHub Actions self-hosted runners.

The GitHub Actions CI will run automatically when the "Run CICD" label is added to the PR.
To re-run CI remove and add the label again.
To run CI on an untrusted fork, a NeMo user with write access must first click "Approve and run".

# Before your PR is "Ready for review"
**Pre checks**:
- [ ] Make sure you read and followed [Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md)
- [ ] Did you write any new necessary tests?
- [ ] Did you add or update any necessary documentation?
- [ ] Does the PR affect components that are optional to install? (Ex: Numba, Pynini, Apex etc)
  - [ ] Reviewer: Does the PR have correct import guards for all optional libraries?
  
**PR Type**:
- [ ] New Feature
- [ ] Bugfix
- [ ] Documentation

If you haven't finished some of the above items you can still open "Draft" PR.


## Who can review?

Anyone in the community is free to review the PR once the checks have passed. 
[Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md) contains specific people who can review PRs to various areas.

# Additional Information
* Related to # (issue)


thanks for the explanations!
Adithyare/mamba dist ckpt updates
State: closed | Pull request: yes
Labels: name: stale

name: NLP

name: common

# What does this PR do ?

Add a one line overview of what this PR aims to accomplish.

**Collection**: [Note which collection this PR will affect]

# Changelog 
- Add specific line by line info of high level changes in this PR.

# Usage
* You can potentially add a usage example below

```python
# Add a code snippet demonstrating how to use this 
```

# GitHub Actions CI

The Jenkins CI system has been replaced by GitHub Actions self-hosted runners.

The GitHub Actions CI will run automatically when the "Run CICD" label is added to the PR.
To re-run CI remove and add the label again.
To run CI on an untrusted fork, a NeMo user with write access must first click "Approve and run".

# Before your PR is "Ready for review"
**Pre checks**:
- [ ] Make sure you read and followed [Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md)
- [ ] Did you write any new necessary tests?
- [ ] Did you add or update any necessary documentation?
- [ ] Does the PR affect components that are optional to install? (Ex: Numba, Pynini, Apex etc)
  - [ ] Reviewer: Does the PR have correct import guards for all optional libraries?
  
**PR Type**:
- [ ] New Feature
- [ ] Bugfix
- [ ] Documentation

If you haven't finished some of the above items you can still open "Draft" PR.


## Who can review?

Anyone in the community is free to review the PR once the checks have passed. 
[Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md) contains specific people who can review PRs to various areas.

# Additional Information
* Related to # (issue)


This PR is stale because it has been open for 14 days with no activity. Remove stale label or comment or update or this will be closed in 7 days.

This PR was closed because it has been inactive for 7 days since being marked as stale.
Support LoRA in TensorRTMMExporter
State: closed | Pull request: yes
Labels: name: Multi Modal

name: Run CICD

# What does this PR do ?

Support LoRA in TensorRTMMExporter

**Collection**: [Note which collection this PR will affect]

# Changelog 
- Add specific line by line info of high level changes in this PR.

# Usage
* You can potentially add a usage example below

```python
# Add a code snippet demonstrating how to use this 
```

# GitHub Actions CI

The Jenkins CI system has been replaced by GitHub Actions self-hosted runners.

The GitHub Actions CI will run automatically when the "Run CICD" label is added to the PR.
To re-run CI remove and add the label again.
To run CI on an untrusted fork, a NeMo user with write access must first click "Approve and run".

# Before your PR is "Ready for review"
**Pre checks**:
- [ ] Make sure you read and followed [Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md)
- [ ] Did you write any new necessary tests?
- [ ] Did you add or update any necessary documentation?
- [ ] Does the PR affect components that are optional to install? (Ex: Numba, Pynini, Apex etc)
  - [ ] Reviewer: Does the PR have correct import guards for all optional libraries?
  
**PR Type**:
- [ ] New Feature
- [ ] Bugfix
- [ ] Documentation

If you haven't finished some of the above items you can still open "Draft" PR.


## Who can review?

Anyone in the community is free to review the PR once the checks have passed. 
[Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md) contains specific people who can review PRs to various areas.

# Additional Information
* Related to # (issue)
Tokenizer extension for HF APLO
State: closed | Pull request: yes
Labels: name: stale

# What does this PR do ?

Implement tokenizer methods required by TRT-LLM

**Collection**: [Note which collection this PR will affect]

# Changelog 
- Add specific line by line info of high level changes in this PR.

# Usage
* You can potentially add a usage example below

```python
# Add a code snippet demonstrating how to use this 
```

# GitHub Actions CI

The Jenkins CI system has been replaced by GitHub Actions self-hosted runners.

The GitHub Actions CI will run automatically when the "Run CICD" label is added to the PR.
To re-run CI remove and add the label again.
To run CI on an untrusted fork, a NeMo user with write access must first click "Approve and run".

# Before your PR is "Ready for review"
**Pre checks**:
- [ ] Make sure you read and followed [Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md)
- [ ] Did you write any new necessary tests?
- [ ] Did you add or update any necessary documentation?
- [ ] Does the PR affect components that are optional to install? (Ex: Numba, Pynini, Apex etc)
  - [ ] Reviewer: Does the PR have correct import guards for all optional libraries?
  
**PR Type**:
- [ ] New Feature
- [ ] Bugfix
- [ ] Documentation

If you haven't finished some of the above items you can still open "Draft" PR.


## Who can review?

Anyone in the community is free to review the PR once the checks have passed. 
[Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md) contains specific people who can review PRs to various areas.

# Additional Information
* Related to # (issue)


This PR is stale because it has been open for 14 days with no activity. Remove stale label or comment or update or this will be closed in 7 days.

This PR was closed because it has been inactive for 7 days since being marked as stale.
[NeMo-UX] Adding copyright to collections.llm & lightning
State: closed | Pull request: yes
Labels: name: Run CICD

# What does this PR do ?

Add a one line overview of what this PR aims to accomplish.

**Collection**: [Note which collection this PR will affect]

# Changelog 
- Add specific line by line info of high level changes in this PR.

# Usage
* You can potentially add a usage example below

```python
# Add a code snippet demonstrating how to use this 
```

# GitHub Actions CI

The Jenkins CI system has been replaced by GitHub Actions self-hosted runners.

The GitHub Actions CI will run automatically when the "Run CICD" label is added to the PR.
To re-run CI remove and add the label again.
To run CI on an untrusted fork, a NeMo user with write access must first click "Approve and run".

# Before your PR is "Ready for review"
**Pre checks**:
- [ ] Make sure you read and followed [Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md)
- [ ] Did you write any new necessary tests?
- [ ] Did you add or update any necessary documentation?
- [ ] Does the PR affect components that are optional to install? (Ex: Numba, Pynini, Apex etc)
  - [ ] Reviewer: Does the PR have correct import guards for all optional libraries?
  
**PR Type**:
- [ ] New Feature
- [ ] Bugfix
- [ ] Documentation

If you haven't finished some of the above items you can still open "Draft" PR.


## Who can review?

Anyone in the community is free to review the PR once the checks have passed. 
[Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md) contains specific people who can review PRs to various areas.

# Additional Information
* Related to # (issue)


> CI test? :)

@pablo-garay is working on this. We have such a test but apparently was not working properly.
Refactor parsing flags for TensorRTLLM exporter
State: closed | Pull request: yes
Labels: name: stale

# What does this PR do ?

Refactor parsing flags for TensorRTLLM exporter

**Collection**: nlp

# Changelog 
- Add specific line by line info of high level changes in this PR.

# Usage
* You can potentially add a usage example below

```python
# Add a code snippet demonstrating how to use this 
```

# GitHub Actions CI

The Jenkins CI system has been replaced by GitHub Actions self-hosted runners.

The GitHub Actions CI will run automatically when the "Run CICD" label is added to the PR.
To re-run CI remove and add the label again.
To run CI on an untrusted fork, a NeMo user with write access must first click "Approve and run".

# Before your PR is "Ready for review"
**Pre checks**:
- [ ] Make sure you read and followed [Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md)
- [ ] Did you write any new necessary tests?
- [ ] Did you add or update any necessary documentation?
- [ ] Does the PR affect components that are optional to install? (Ex: Numba, Pynini, Apex etc)
  - [ ] Reviewer: Does the PR have correct import guards for all optional libraries?
  
**PR Type**:
- [ ] New Feature
- [ ] Bugfix
- [ ] Documentation

If you haven't finished some of the above items you can still open "Draft" PR.


## Who can review?

Anyone in the community is free to review the PR once the checks have passed. 
[Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md) contains specific people who can review PRs to various areas.

# Additional Information
* Related to # (issue)


Reviewed, looks good, thanks.

@oyilmaz-nvidia I think this is a good and worthwhile improvement in the codebase, I'd suggest we merge it

This PR is stale because it has been open for 14 days with no activity. Remove stale label or comment or update or this will be closed in 7 days.

This PR is stale because it has been open for 14 days with no activity. Remove stale label or comment or update or this will be closed in 7 days.

This PR was closed because it has been inactive for 7 days since being marked as stale.
ci: Detect secrets
State: closed | Pull request: yes
Labels: name: CI

name: Run CICD

# What does this PR do ?

Adds a PR and `workflow_call` workflow that cans secrets of a branch. It adds a baseline of all existing secrets, that are "accepted" to live in this repo. Everything that is added is a violation.

A future PR will iterate over all branches and call this workflow via `workflow_call` on a nightly basis

**Collection**: [Note which collection this PR will affect]

# Changelog 
- Add specific line by line info of high level changes in this PR.

# Usage
* You can potentially add a usage example below

```python
# Add a code snippet demonstrating how to use this 
```

# GitHub Actions CI

The Jenkins CI system has been replaced by GitHub Actions self-hosted runners.

The GitHub Actions CI will run automatically when the "Run CICD" label is added to the PR.
To re-run CI remove and add the label again.
To run CI on an untrusted fork, a NeMo user with write access must first click "Approve and run".

# Before your PR is "Ready for review"
**Pre checks**:
- [ ] Make sure you read and followed [Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md)
- [ ] Did you write any new necessary tests?
- [ ] Did you add or update any necessary documentation?
- [ ] Does the PR affect components that are optional to install? (Ex: Numba, Pynini, Apex etc)
  - [ ] Reviewer: Does the PR have correct import guards for all optional libraries?
  
**PR Type**:
- [ ] New Feature
- [ ] Bugfix
- [ ] Documentation

If you haven't finished some of the above items you can still open "Draft" PR.


## Who can review?

Anyone in the community is free to review the PR once the checks have passed. 
[Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md) contains specific people who can review PRs to various areas.

# Additional Information
* Related to # (issue)
[Audio] Fix forward pass for flow matching pretraining
State: closed | Pull request: yes
Labels: name: stale

name: audio

# What does this PR do ?

This PR removes SSL masking from `forward`, and it adds `forward_for_eval` which keeps validation masking and can be used in SSL pretraining.

**Collection**: audio

# Changelog 
- Remove `encoded = self.ssl_pretrain_masking` from `forward`
- Added `forward_for_eval`, which keeps masking
- Changed `evaluation_step` to use `forward_for_eval`

# Usage
N/A

# GitHub Actions CI

The Jenkins CI system has been replaced by GitHub Actions self-hosted runners.

The GitHub Actions CI will run automatically when the "Run CICD" label is added to the PR.
To re-run CI remove and add the label again.
To run CI on an untrusted fork, a NeMo user with write access must first click "Approve and run".

# Before your PR is "Ready for review"
**Pre checks**:
- [ ] Make sure you read and followed [Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md)
- [ ] Did you write any new necessary tests?
- [ ] Did you add or update any necessary documentation?
- [ ] Does the PR affect components that are optional to install? (Ex: Numba, Pynini, Apex etc)
  - [ ] Reviewer: Does the PR have correct import guards for all optional libraries?
  
**PR Type**:
- [ ] New Feature
- [x] Bugfix
- [ ] Documentation

If you haven't finished some of the above items you can still open "Draft" PR.


## Who can review?

Anyone in the community is free to review the PR once the checks have passed. 
[Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md) contains specific people who can review PRs to various areas.

# Additional Information
* Related to # (issue)


This PR is stale because it has been open for 14 days with no activity. Remove stale label or comment or update or this will be closed in 7 days.

This PR was closed because it has been inactive for 7 days since being marked as stale.
TE: if cuda is not available raise ImportError
State: closed | Pull request: yes
Labels: name: core

name: stale

name: CI

# What does this PR do ?

Add a one line overview of what this PR aims to accomplish.

**Collection**: [Note which collection this PR will affect]

# Changelog 
- Add specific line by line info of high level changes in this PR.

# Usage
* You can potentially add a usage example below

```python
# Add a code snippet demonstrating how to use this 
```

# GitHub Actions CI

The Jenkins CI system has been replaced by GitHub Actions self-hosted runners.

The GitHub Actions CI will run automatically when the "Run CICD" label is added to the PR.
To re-run CI remove and add the label again.
To run CI on an untrusted fork, a NeMo user with write access must first click "Approve and run".

# Before your PR is "Ready for review"
**Pre checks**:
- [ ] Make sure you read and followed [Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md)
- [ ] Did you write any new necessary tests?
- [ ] Did you add or update any necessary documentation?
- [ ] Does the PR affect components that are optional to install? (Ex: Numba, Pynini, Apex etc)
  - [ ] Reviewer: Does the PR have correct import guards for all optional libraries?
  
**PR Type**:
- [ ] New Feature
- [ ] Bugfix
- [ ] Documentation

If you haven't finished some of the above items you can still open "Draft" PR.


## Who can review?

Anyone in the community is free to review the PR once the checks have passed. 
[Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md) contains specific people who can review PRs to various areas.

# Additional Information
* Related to # (issue)


This is pending an mcore MR (2030).

This PR is stale because it has been open for 14 days with no activity. Remove stale label or comment or update or this will be closed in 7 days.

This PR was closed because it has been inactive for 7 days since being marked as stale.

This PR is stale because it has been open for 14 days with no activity. Remove stale label or comment or update or this will be closed in 7 days.

This PR was closed because it has been inactive for 7 days since being marked as stale.
Fix instrunct-pic2pic in NeMo CI
State: closed | Pull request: yes
Labels: name: Multi Modal

name: Run CICD

# What does this PR do ?

Fix instrunct-pic2pic in NeMo CI, an issue caused by PTL update.

**Collection**: [multimodal]

# Changelog 
- Add specific line by line info of high level changes in this PR.

# Usage
* You can potentially add a usage example below

```python
# Add a code snippet demonstrating how to use this 
```

# GitHub Actions CI

The Jenkins CI system has been replaced by GitHub Actions self-hosted runners.

The GitHub Actions CI will run automatically when the "Run CICD" label is added to the PR.
To re-run CI remove and add the label again.
To run CI on an untrusted fork, a NeMo user with write access must first click "Approve and run".

# Before your PR is "Ready for review"
**Pre checks**:
- [ ] Make sure you read and followed [Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md)
- [ ] Did you write any new necessary tests?
- [ ] Did you add or update any necessary documentation?
- [ ] Does the PR affect components that are optional to install? (Ex: Numba, Pynini, Apex etc)
  - [ ] Reviewer: Does the PR have correct import guards for all optional libraries?
  
**PR Type**:
- [ ] New Feature
- [ ] Bugfix
- [ ] Documentation

If you haven't finished some of the above items you can still open "Draft" PR.


## Who can review?

Anyone in the community is free to review the PR once the checks have passed. 
[Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md) contains specific people who can review PRs to various areas.

# Additional Information
* Related to # (issue)
Add EP to mixtral-8x22b recipe
State: closed | Pull request: yes
Labels: name: Run CICD

# What does this PR do ?

Add a one line overview of what this PR aims to accomplish.

**Collection**: [Note which collection this PR will affect]

# Changelog 
- Add specific line by line info of high level changes in this PR.

# Usage
* You can potentially add a usage example below

```python
# Add a code snippet demonstrating how to use this 
```

# GitHub Actions CI

The Jenkins CI system has been replaced by GitHub Actions self-hosted runners.

The GitHub Actions CI will run automatically when the "Run CICD" label is added to the PR.
To re-run CI remove and add the label again.
To run CI on an untrusted fork, a NeMo user with write access must first click "Approve and run".

# Before your PR is "Ready for review"
**Pre checks**:
- [ ] Make sure you read and followed [Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md)
- [ ] Did you write any new necessary tests?
- [ ] Did you add or update any necessary documentation?
- [ ] Does the PR affect components that are optional to install? (Ex: Numba, Pynini, Apex etc)
  - [ ] Reviewer: Does the PR have correct import guards for all optional libraries?
  
**PR Type**:
- [ ] New Feature
- [ ] Bugfix
- [ ] Documentation

If you haven't finished some of the above items you can still open "Draft" PR.


## Who can review?

Anyone in the community is free to review the PR once the checks have passed. 
[Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md) contains specific people who can review PRs to various areas.

# Additional Information
* Related to # (issue)