renwei2024/nemo-github-issues huggingface dataset:
Akoumparouli/nemo ux test fixes
State: closed | Pull request: yes
Labels: name: Run CICD

name: r2.0.0

# What does this PR do ?

1. environ variables
2. Microbatch config

Are both stateful when multiple tests are run in the same process. 

**Collection**: [Note which collection this PR will affect]

# Changelog 
- Add specific line by line info of high level changes in this PR.

# Usage
* You can potentially add a usage example below

```python
# Add a code snippet demonstrating how to use this 
```

# GitHub Actions CI

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To re-run CI remove and add the label again.
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# Before your PR is "Ready for review"
**Pre checks**:
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**PR Type**:
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## Who can review?

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[Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md) contains specific people who can review PRs to various areas.

# Additional Information
* Related to # (issue)


[🤖]: Hi @akoumpa 👋,

I just wanted to let you know that, you know, a [CICD pipeline](https://github.com/$REPOSITORY/actions/runs/$RUN_ID) for this PR just finished successfully ✨

So it might be time to merge this PR or like to get some approvals 🚀

But I'm just a 🤖 so I'll leave it you what to do next.

Have a great day! 

//cc @ko3n1g
Adding Resume pretraining for NeMo 2.0 T5 CICD 
State: closed | Pull request: yes
Labels: name: CI

name: Run CICD

# What does this PR do ?

Adding Resume pretraining for NeMo 2.0 T5 CICD 

**Collection**: [Note which collection this PR will affect]

# Changelog 
- Add specific line by line info of high level changes in this PR.

# Usage
* You can potentially add a usage example below

```python
# Add a code snippet demonstrating how to use this 
```

# GitHub Actions CI

The Jenkins CI system has been replaced by GitHub Actions self-hosted runners.

The GitHub Actions CI will run automatically when the "Run CICD" label is added to the PR.
To re-run CI remove and add the label again.
To run CI on an untrusted fork, a NeMo user with write access must first click "Approve and run".

# Before your PR is "Ready for review"
**Pre checks**:
- [ ] Make sure you read and followed [Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md)
- [ ] Did you write any new necessary tests?
- [ ] Did you add or update any necessary documentation?
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  - [ ] Reviewer: Does the PR have correct import guards for all optional libraries?
  
**PR Type**:
- [ ] New Feature
- [ ] Bugfix
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If you haven't finished some of the above items you can still open "Draft" PR.


## Who can review?

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[Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md) contains specific people who can review PRs to various areas.

# Additional Information
* Related to # (issue)


[🤖]: Hi @huvunvidia 👋,

I just wanted to let you know that, you know, a [CICD pipeline](https://github.com/NVIDIA/NeMo/actions/runs/11064119499) for this PR just finished successfully ✨

So it might be time to merge this PR or like to get some approvals 🚀

But I'm just a 🤖 so I'll leave it you what to do next.

Have a great day! 

//cc @ko3n1g
[speechllm] Replace TextProcessing with PromptFormatter
State: closed | Pull request: yes
Labels: name: common

name: Multi Modal

# What does this PR do ?

Add a one line overview of what this PR aims to accomplish.

**Collection**: [Note which collection this PR will affect]

# Changelog 
- Add specific line by line info of high level changes in this PR.

# Usage
* You can potentially add a usage example below

```python
# Add a code snippet demonstrating how to use this 
```

# GitHub Actions CI

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To re-run CI remove and add the label again.
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# Before your PR is "Ready for review"
**Pre checks**:
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# Additional Information
* Related to # (issue)


Please check the following two new commits:
* New test for `token_to_generate` https://github.com/NVIDIA/NeMo/pull/10639/commits/2b24283b93fcf52a2e461a7b1aa95ef197be665f
* Added padding optimization (which changes the test outcome as seen in diff): https://github.com/NVIDIA/NeMo/pull/10639/commits/1946d71e8691356107709e97a828f50d52750e26

We'll leave audio_locator thing for follow up work as discussed offline.
Cherrypick #10466 #10611 #10632 without the ci test
State: closed | Pull request: yes
Labels: name: Run CICD

# What does this PR do ?

Cherry pick a few related PRs: #10466 #10611 #10632

**Collection**: [Note which collection this PR will affect]

# Changelog 
- Add specific line by line info of high level changes in this PR.

# Usage
* You can potentially add a usage example below

```python
# Add a code snippet demonstrating how to use this 
```

# GitHub Actions CI

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The GitHub Actions CI will run automatically when the "Run CICD" label is added to the PR.
To re-run CI remove and add the label again.
To run CI on an untrusted fork, a NeMo user with write access must first click "Approve and run".

# Before your PR is "Ready for review"
**Pre checks**:
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**PR Type**:
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## Who can review?

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# Additional Information
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ci: Fix hyperlink for feedback
State: closed | Pull request: yes
Labels: name: CI

# What does this PR do ?

Add a one line overview of what this PR aims to accomplish.

**Collection**: [Note which collection this PR will affect]

# Changelog 
- Add specific line by line info of high level changes in this PR.

# Usage
* You can potentially add a usage example below

```python
# Add a code snippet demonstrating how to use this 
```

# GitHub Actions CI

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The GitHub Actions CI will run automatically when the "Run CICD" label is added to the PR.
To re-run CI remove and add the label again.
To run CI on an untrusted fork, a NeMo user with write access must first click "Approve and run".

# Before your PR is "Ready for review"
**Pre checks**:
- [ ] Make sure you read and followed [Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md)
- [ ] Did you write any new necessary tests?
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**PR Type**:
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## Who can review?

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# Additional Information
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Cherry pick `Fix asr warnings (10469)` into `r2.0.0`
State: closed | Pull request: yes
Labels: name: TTS

name: ASR

name: Run CICD

name: audio

[🤖]: Hi @nithinraok 👋,<br><br>we've cherry picked #10469 into `r2.0.0` for you! 🚀<br><br>Please review and approve this cherry pick by your convenience\!
ci: Fix mention
State: closed | Pull request: yes
Labels: name: CI

# What does this PR do ?

Add a one line overview of what this PR aims to accomplish.

**Collection**: [Note which collection this PR will affect]

# Changelog 
- Add specific line by line info of high level changes in this PR.

# Usage
* You can potentially add a usage example below

```python
# Add a code snippet demonstrating how to use this 
```

# GitHub Actions CI

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The GitHub Actions CI will run automatically when the "Run CICD" label is added to the PR.
To re-run CI remove and add the label again.
To run CI on an untrusted fork, a NeMo user with write access must first click "Approve and run".

# Before your PR is "Ready for review"
**Pre checks**:
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**PR Type**:
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## Who can review?

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# Additional Information
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Unit test for existing speechllm dataset with llama2 prompt format
State: closed | Pull request: yes
Labels: name: Multi Modal

# What does this PR do ?

To prevent breaking backward compatibility when moving to PromptFormatter API.

**Collection**: multimodal

# Changelog 
- Add specific line by line info of high level changes in this PR.

# Usage
* You can potentially add a usage example below

```python
# Add a code snippet demonstrating how to use this 
```

# GitHub Actions CI

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The GitHub Actions CI will run automatically when the "Run CICD" label is added to the PR.
To re-run CI remove and add the label again.
To run CI on an untrusted fork, a NeMo user with write access must first click "Approve and run".

# Before your PR is "Ready for review"
**Pre checks**:
- [ ] Make sure you read and followed [Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md)
- [ ] Did you write any new necessary tests?
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  - [ ] Reviewer: Does the PR have correct import guards for all optional libraries?
  
**PR Type**:
- [ ] New Feature
- [ ] Bugfix
- [ ] Documentation

If you haven't finished some of the above items you can still open "Draft" PR.


## Who can review?

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# Additional Information
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Cherry pick `Fix Clip initializing issue in r2.0.0 (10585)` into `r2.0.0`
State: closed | Pull request: yes
Labels: name: Multi Modal

name: Run CICD

[🤖]: Hi @yaoyu-33 👋,<br><br>we've cherry picked #10585 into `r2.0.0` for you! 🚀<br><br>Please review and approve this cherry pick by your convenience\!
Add CI tests for SFT/PEFT
State: closed | Pull request: yes
Labels: name: CI

name: Run CICD

# What does this PR do ?

Add GitHub actions tests for SFT/PEFT workloads in NeMo 2

**Collection**: [Note which collection this PR will affect]

# Changelog 
- Add specific line by line info of high level changes in this PR.

# Usage
* You can potentially add a usage example below

```python
# Add a code snippet demonstrating how to use this 
```

# GitHub Actions CI

The Jenkins CI system has been replaced by GitHub Actions self-hosted runners.

The GitHub Actions CI will run automatically when the "Run CICD" label is added to the PR.
To re-run CI remove and add the label again.
To run CI on an untrusted fork, a NeMo user with write access must first click "Approve and run".

# Before your PR is "Ready for review"
**Pre checks**:
- [ ] Make sure you read and followed [Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md)
- [ ] Did you write any new necessary tests?
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  - [ ] Reviewer: Does the PR have correct import guards for all optional libraries?
  
**PR Type**:
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## Who can review?

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# Additional Information
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CI issue should be resolved once #10358 is merged

New tests passed https://github.com/NVIDIA/NeMo/actions/runs/11223752196/

[🤖]: Hi @cuichenx 👋,

We wanted to let you know that a [CICD pipeline](https://github.com/NVIDIA/NeMo/actions/runs/11296908276) for this PR just finished successfully

So it might be time to merge this PR or get some approvals

I'm just a bot so I'll leave it you what to do next.

//cc @pablo-garay @ko3n1g

CI passed: https://github.com/NVIDIA/NeMo/actions/runs/11296908276/job/31427200519?pr=10632

Needed to resolve conflict which had same change in conflicting branches. @akoumpa @pablo-garay had already approved & CI passed. Merging...
Speechllm dataset basic unit test
State: closed | Pull request: yes
Labels: name: Multi Modal

# What does this PR do ?

Will help me ensure I don't break anything in follow up PRs.

**Collection**: multimodal

# Changelog 
- Add specific line by line info of high level changes in this PR.

# Usage
* You can potentially add a usage example below

```python
# Add a code snippet demonstrating how to use this 
```

# GitHub Actions CI

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The GitHub Actions CI will run automatically when the "Run CICD" label is added to the PR.
To re-run CI remove and add the label again.
To run CI on an untrusted fork, a NeMo user with write access must first click "Approve and run".

# Before your PR is "Ready for review"
**Pre checks**:
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**PR Type**:
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If you haven't finished some of the above items you can still open "Draft" PR.


## Who can review?

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[Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md) contains specific people who can review PRs to various areas.

# Additional Information
* Related to # (issue)
Adding "github.run_id" to NeMo_2 run
State: closed | Pull request: yes
Labels: name: stale

name: CI

name: common

# What does this PR do ?

Adding "github.run_id" to NeMo_2 run, following suggestion by Oliver in PR: https://github.com/NVIDIA/NeMo/pull/10263

**Collection**: [Note which collection this PR will affect]

# Changelog 
- Add specific line by line info of high level changes in this PR.

# Usage
* You can potentially add a usage example below

```python
# Add a code snippet demonstrating how to use this 
```

# GitHub Actions CI

The Jenkins CI system has been replaced by GitHub Actions self-hosted runners.

The GitHub Actions CI will run automatically when the "Run CICD" label is added to the PR.
To re-run CI remove and add the label again.
To run CI on an untrusted fork, a NeMo user with write access must first click "Approve and run".

# Before your PR is "Ready for review"
**Pre checks**:
- [ ] Make sure you read and followed [Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md)
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  - [ ] Reviewer: Does the PR have correct import guards for all optional libraries?
  
**PR Type**:
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If you haven't finished some of the above items you can still open "Draft" PR.


## Who can review?

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[Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md) contains specific people who can review PRs to various areas.

# Additional Information
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This PR is stale because it has been open for 14 days with no activity. Remove stale label or comment or update or this will be closed in 7 days.

This PR was closed because it has been inactive for 7 days since being marked as stale.
ci: Add CICD result feedback
State: closed | Pull request: yes
Labels: name: CI

name: Run CICD

# What does this PR do ?

Add a one line overview of what this PR aims to accomplish.

**Collection**: [Note which collection this PR will affect]

# Changelog 
- Add specific line by line info of high level changes in this PR.

# Usage
* You can potentially add a usage example below

```python
# Add a code snippet demonstrating how to use this 
```

# GitHub Actions CI

The Jenkins CI system has been replaced by GitHub Actions self-hosted runners.

The GitHub Actions CI will run automatically when the "Run CICD" label is added to the PR.
To re-run CI remove and add the label again.
To run CI on an untrusted fork, a NeMo user with write access must first click "Approve and run".

# Before your PR is "Ready for review"
**Pre checks**:
- [ ] Make sure you read and followed [Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md)
- [ ] Did you write any new necessary tests?
- [ ] Did you add or update any necessary documentation?
- [ ] Does the PR affect components that are optional to install? (Ex: Numba, Pynini, Apex etc)
  - [ ] Reviewer: Does the PR have correct import guards for all optional libraries?
  
**PR Type**:
- [ ] New Feature
- [ ] Bugfix
- [ ] Documentation

If you haven't finished some of the above items you can still open "Draft" PR.


## Who can review?

Anyone in the community is free to review the PR once the checks have passed. 
[Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md) contains specific people who can review PRs to various areas.

# Additional Information
* Related to # (issue)


[🤖]: Hi @ko3n1g 👋,

I just wanted to let you know that, you know, the CICD pipeline for this PR
just finished successfully ✨

So it might be time to merge this PR or like to get some approvals 🚀

But I'm just a 🤖 so I'll leave it you what to do next.

Have a great day! 

//cc @ko3n1g
Cherry pick `Fix mb_calculator import in lora tutorial (10624)` into `r2.0.0`
State: closed | Pull request: yes
Labels: name: NLP

name: Run CICD

[🤖]: Hi @BoxiangW 👋,<br><br>we've cherry picked #10624 into `r2.0.0` for you! 🚀<br><br>Please review and approve this cherry pick by your convenience\!
Fix lora tutorial import issue
State: closed | Pull request: yes
Labels: name: NLP

name: Run CICD

# What does this PR do ?

Add a one line overview of what this PR aims to accomplish.

**Collection**: [Note which collection this PR will affect]

# Changelog 
- Add specific line by line info of high level changes in this PR.

# Usage
* You can potentially add a usage example below

```python
# Add a code snippet demonstrating how to use this 
```

# GitHub Actions CI

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The GitHub Actions CI will run automatically when the "Run CICD" label is added to the PR.
To re-run CI remove and add the label again.
To run CI on an untrusted fork, a NeMo user with write access must first click "Approve and run".

# Before your PR is "Ready for review"
**Pre checks**:
- [ ] Make sure you read and followed [Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md)
- [ ] Did you write any new necessary tests?
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  - [ ] Reviewer: Does the PR have correct import guards for all optional libraries?
  
**PR Type**:
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If you haven't finished some of the above items you can still open "Draft" PR.


## Who can review?

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[Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md) contains specific people who can review PRs to various areas.

# Additional Information
* Related to # (issue)


Closed in favor of the automatic cherry-pick: #10628
Downgrading the 'datasets' package from 3.0.0 to 2.21.0 in some notebooks of tutorials
State: closed | Pull request: yes
Labels: name: ASR


# What does this PR do ?

'[datasets](https://pypi.org/project/datasets/#history)' recently released the latest version 3.0.0 on Sep 11th, but some HF datasets (e.g., [MCV 3.0](https://huggingface.co/datasets/mozilla-foundation/common_voice_3_0), [MCV 6.1](https://huggingface.co/datasets/mozilla-foundation/common_voice_6_1)) do not update their code for the latest version. If we try to download these MCV with the latest 'datasets', it will raise an error: _TypeError: DownloadConfig.__init__() got an unexpected keyword argument 'ignore_url_params'._ 
Hence, we need to downgrade the 'datasets' package to the last version 2.21.0 in some tutorial notebooks. Please check the first block of each notebook.

**Collection**: [Note which collection this PR will affect]
NeMo/tutorial/asr 

# Changelog 
- Add specific line by line info of high level changes in this PR.
Updated requirements file 

# GitHub Actions CI

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To re-run CI remove and add the label again.
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# Before your PR is "Ready for review"
**Pre checks**:
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  - [ ] Reviewer: Does the PR have correct import guards for all optional libraries?
  
**PR Type**:
- [ ] New Feature
- [x] Bugfix
- [ ] Documentation

If you haven't finished some of the above items you can still open "Draft" PR.


## Who can review?

Anyone in the community is free to review the PR once the checks have passed. 
[Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md) contains specific people who can review PRs to various areas.

# Additional Information
* Related to # (issue)
Fix mb_calculator import in lora tutorial
State: closed | Pull request: yes
Labels: name: NLP

name: r2.0.0

# What does this PR do ?

Add a one line overview of what this PR aims to accomplish.

**Collection**: [Note which collection this PR will affect]

# Changelog 
- Add specific line by line info of high level changes in this PR.

# Usage
* You can potentially add a usage example below

```python
# Add a code snippet demonstrating how to use this 
```

# GitHub Actions CI

The Jenkins CI system has been replaced by GitHub Actions self-hosted runners.

The GitHub Actions CI will run automatically when the "Run CICD" label is added to the PR.
To re-run CI remove and add the label again.
To run CI on an untrusted fork, a NeMo user with write access must first click "Approve and run".

# Before your PR is "Ready for review"
**Pre checks**:
- [ ] Make sure you read and followed [Contributor guidelines](https://github.com/NVIDIA/NeMo/blob/main/CONTRIBUTING.md)
- [ ] Did you write any new necessary tests?
- [ ] Did you add or update any necessary documentation?
- [ ] Does the PR affect components that are optional to install? (Ex: Numba, Pynini, Apex etc)
  - [ ] Reviewer: Does the PR have correct import guards for all optional libraries?
  
**PR Type**:
- [ ] New Feature
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Add inference optimization blog post announcement to README
State: closed | Pull request: yes

# What does this PR do ?

Add ASR inference optimization blog post announcement to README

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- Add ASR inference optimization blog post announcement to README

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Cherry pick `Extending modelopt spec for TEDotProductAttention (10523)` into `r2.0.0`
State: closed | Pull request: yes
Labels: name: NLP

name: Run CICD

[🤖]: Hi @janekl 👋,<br><br>we've cherry picked #10523 into `r2.0.0` for you! 🚀<br><br>Please review and approve this cherry pick by your convenience\!
Cherry pick `Move update_config_with_dtype_overrides logging to debug (10602)` into `r2.0.0`
State: closed | Pull request: yes
Labels: name: Run CICD

[🤖]: Hi @akoumpa 👋,<br><br>we've cherry picked #10602 into `r2.0.0` for you! 🚀<br><br>Please review and approve this cherry pick by your convenience\!

duplicate of #10609
ci: Wrap into quotes
State: closed | Pull request: yes
Labels: name: CI

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Add pad_seq_to_mult to sample_sequence_batch
State: closed | Pull request: yes
Labels: name: stale

name: NLP

# What does this PR do ?

Ensures proper padding during generation; proper= sequence length is dividable by TP/SP.
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@akoumpa , Ideally can we also start updating mcore generate, because going forward, nemo will be using mcore generate


This PR is stale because it has been open for 14 days with no activity. Remove stale label or comment or update or this will be closed in 7 days.

This PR was closed because it has been inactive for 7 days since being marked as stale.
Add lazy init for export
State: closed | Pull request: yes
Labels: name: Run CICD

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@cuichenx it skips the random initialization of weights, since those will be overwritten anyway with the ones from checkpoint. Random initialization can be a a bottleneck/time-consuming if it happens on CPU and have a large model.


> @cuichenx it skips the random initialization of weights, since those will be overwritten anyway with the ones from checkpoint. Random initialization can be a a bottleneck/time-consuming if it happens on CPU and have a large model.

I see, this is the export code. That makes sense
Fix LoRA contiguous tensor
State: closed | Pull request: yes
Labels: name: Run CICD

name: r2.0.0

# What does this PR do ?

Fix contiguous tensor issue in LoRA with mbs>1

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- Add specific line by line info of high level changes in this PR.

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These are not related to the PR so let's discuss elsewhere.

adding CI tests in separate PR: https://github.com/NVIDIA/NeMo/pull/10632
Akoumparouli/cherry pick main 10602
State: closed | Pull request: yes
Labels: name: Run CICD

# What does this PR do ?

src https://github.com/NVIDIA/NeMo/pull/10602

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use _get_extra_te_kwargs_meta in fabric (call mcore's _get_extra_te_k…
State: closed | Pull request: yes
Labels: name: Run CICD

…wargs & overwrite device)

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https://github.com/NVIDIA/NeMo/pull/10558 related

I see repeatedly a timeout for this test: [L2_Megatron_GPT_Pretraining_and_Resume_Training_TP2 / main](https://github.com/NVIDIA/NeMo/actions/runs/11250797032/job/31286669499)

[🤖]: Hi @akoumpa 👋,

We wanted to let you know that a [CICD pipeline](https://github.com/NVIDIA/NeMo/actions/runs/11350185891) for this PR just finished successfully

So it might be time to merge this PR or get some approvals

I'm just a bot so I'll leave it you what to do next.

//cc @pablo-garay @ko3n1g
Mistral-NeMo-12B recipe
State: closed | Pull request: yes
Labels: name: Run CICD

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[🤖]: Hi @akoumpa 👋,

We wanted to let you know that a [CICD pipeline](https://github.com/NVIDIA/NeMo/actions/runs/11409300540) for this PR just finished successfully

So it might be time to merge this PR or get some approvals

I'm just a bot so I'll leave it you what to do next.

//cc @pablo-garay @ko3n1g
add import gaurd for megatron energon
State: closed | Pull request: yes
Labels: name: Multi Modal

# What does this PR do ?

Adds an import guard for `megatron.energon`.

Currently, NeMo doesn't specify `megatron.energon` as a package dependency, so our bionemo builds are failing with this module not being found. Adding this as an explicit dependency to NeMo would be possible, but in the meantime it's likely easier just wrap this in an import guard so that we don't fail on import-time if this package isn't installed.

**Collection**: `nemo.multimodal.data`.

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duplicate of #10592
cherry picking 10460
State: closed | Pull request: yes
Labels: name: CI

name: Run CICD

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@ko3n1g @pablo-garay This MR is the same as [MR10460](https://github.com/NVIDIA/NeMo/pull/10460), and Oliver mentioned it couldn't be automatically cherry-picked into r2.0.0. 

@ko3n1g @pablo-garay Fixed the naming mismatch of the variable "log_dir" to "dir".