pwc-archive/papers-with-abstracts huggingface dataset:
Systemic Biases in Sign Language AI Research: A Deaf-Led Call to Reevaluate Research Agendas
Authors: Aashaka Desai, Maartje De Meulder, Julie A. Hochgesang, Annemarie Kocab, Alex X. Lu
Date: 2024-03-05 00:00:00
Tasks: Sign Language Recognition

Growing research in sign language recognition, generation, and translation AI has been accompanied by calls for ethical development of such technologies. While these works are crucial to helping individual researchers do better, there is a notable lack of discussion of systemic biases or analysis of rhetoric that shape the research questions and methods in the field, especially as it remains dominated by hearing non-signing researchers. Therefore, we conduct a systematic review of 101 recent papers in sign language AI. Our analysis identifies significant biases in the current state of sign language AI research, including an overfocus on addressing perceived communication barriers, a lack of use of representative datasets, use of annotations lacking linguistic foundations, and development of methods that build on flawed models. We take the position that the field lacks meaningful input from Deaf stakeholders, and is instead driven by what decisions are the most convenient or perceived as important to hearing researchers. We end with a call to action: the field must make space for Deaf researchers to lead the conversation in sign language AI.
The Minimum Information about CLinical Artificial Intelligence Checklist for Generative Modeling Research (MI-CLAIM-GEN)
Authors: Brenda Y. Miao, Irene Y. Chen, Christopher YK Williams, Jaysón Davidson, Augusto Garcia-Agundez, Shenghuan Sun, Travis Zack, Suchi Saria, Rima Arnaout, Giorgio Quer, Hossein J. Sadaei, Ali Torkamani, Brett Beaulieu-Jones, Bin Yu, Milena Gianfrancesco, Atul J. Butte, Beau Norgeot, Madhumita Sushil
Date: 2024-03-05 00:00:00

Recent advances in generative models, including large language models (LLMs), vision language models (VLMs), and diffusion models, have accelerated the field of natural language and image processing in medicine and marked a significant paradigm shift in how biomedical models can be developed and deployed. While these models are highly adaptable to new tasks, scaling and evaluating their usage presents new challenges not addressed in previous frameworks. In particular, the ability of these models to produce useful outputs with little to no specialized training data ("zero-" or "few-shot" approaches), as well as the open-ended nature of their outputs, necessitate the development of new guidelines for robust reporting of clinical generative model research. In response to gaps in standards and best practices for the development of clinical AI tools identified by US Executive Order 141103 and several emerging national networks for clinical AI evaluation, we begin to formalize some of these guidelines by building on the original MI-CLAIM checklist. The new checklist, MI-CLAIM-GEN (Table 1), aims to address differences in training, evaluation, interpretability, and reproducibility of new generative models compared to non-generative ("predictive") AI models. This MI-CLAIM-GEN checklist also seeks to clarify cohort selection reporting with unstructured clinical data and adds additional items on alignment with ethical standards for clinical AI research.
Coronary artery segmentation in non-contrast calcium scoring CT images using deep learning
Authors: Mariusz Bujny, Katarzyna Jesionek, Jakub Nalepa, Karol Miszalski-Jamka, Katarzyna Widawka-Żak, Sabina Wolny, Marcin Kostur
Date: 2024-03-04 00:00:00
Tasks: Computed Tomography (CT), Coronary Artery Segmentation, Image Registration, Segmentation

Precise localization of coronary arteries in Computed Tomography (CT) scans is critical from the perspective of medical assessment of coronary artery disease. Although various methods exist that offer high-quality segmentation of coronary arteries in cardiac contrast-enhanced CT scans, the potential of less invasive, non-contrast CT in this area is still not fully exploited. Since such fine anatomical structures are hardly visible in this type of medical images, the existing methods are characterized by high recall and low precision, and are used mainly for filtering of atherosclerotic plaques in the context of calcium scoring. In this paper, we address this research gap and introduce a deep learning algorithm for segmenting coronary arteries in multi-vendor ECG-gated non-contrast cardiac CT images which benefits from a novel framework for semi-automatic generation of Ground Truth (GT) via image registration. We hypothesize that the proposed GT generation process is much more efficient in this case than manual segmentation, since it allows for a fast generation of large volumes of diverse data, which leads to well-generalizing models. To investigate and thoroughly evaluate the segmentation quality based on such an approach, we propose a novel method for manual mesh-to-image registration, which is used to create our test-GT. The experimental study shows that the trained model has significantly higher accuracy than the GT used for training, and leads to the Dice and clDice metrics close to the interrater variability.
Density-based Isometric Mapping
Authors: Bardia Yousefi, Mélina Khansari, Ryan Trask, Patrick Tallon, Carina Carino, Arman Afrasiyabi, Vikas Kundra, Lan Ma, Lei Ren, Keyvan Farahani, Michelle Hershman
Date: 2024-03-04 00:00:00
Tasks: Dimensionality Reduction

The isometric mapping method employs the shortest path algorithm to estimate the Euclidean distance between points on High dimensional (HD) manifolds. This may not be sufficient for weakly uniformed HD data as it could lead to overestimating distances between far neighboring points, resulting in inconsistencies between the intrinsic (local) and extrinsic (global) distances during the projection. To address this issue, we modify the shortest path algorithm by adding a novel constraint inspired by the Parzen-Rosenblatt (PR) window, which helps to maintain the uniformity of the constructed shortest-path graph in Isomap. Multiple imaging datasets overall of 72,236 cases, 70,000 MINST data, 1596 from multiple Chest-XRay pneumonia datasets, and three NSCLC CT/PET datasets with a total of 640 lung cancer patients, were used to benchmark and validate PR-Isomap. 431 imaging biomarkers were extracted from each modality. Our results indicate that PR-Isomap projects HD attributes into a lower-dimensional (LD) space while preserving information, visualized by the MNIST dataset indicating the maintaining local and global distances. PR-Isomap achieved the highest comparative accuracies of 80.9% (STD:5.8) for pneumonia and 78.5% (STD:4.4), 88.4% (STD:1.4), and 61.4% (STD:11.4) for three NSCLC datasets, with a confidence interval of 95% for outcome prediction. Similarly, the multivariate Cox model showed higher overall survival, measured with c-statistics and log-likelihood test, of PR-Isomap compared to other dimensionality reduction methods. Kaplan Meier survival curve also signifies the notable ability of PR-Isomap to distinguish between high-risk and low-risk patients using multimodal imaging biomarkers preserving HD imaging characteristics for precision medicine.
A dataset of over one thousand computed tomography scans of battery cells
Authors: Amariah Condon, Bailey Buscarino, Eric Moch, William J. Sehnert, Owen Miles, Patrick K. Herring, Peter M. Attia
Date: 2024-03-04 00:00:00
Tasks: Computed Tomography (CT)

Battery technology is increasingly important for global electrification efforts. However, batteries are highly sensitive to small manufacturing variations that can induce reliability or safety issues. An important technology for battery quality control is computed tomography (CT) scanning, which is widely used for non-destructive 3D inspection across a variety of clinical and industrial applications. Historically, however, the utility of CT scanning for high-volume manufacturing has been limited by its low throughput as well as the difficulty of handling its large file sizes. In this work, we present a dataset of over one thousand CT scans of as-produced commercially available batteries. The dataset spans various chemistries (lithium-ion and sodium-ion) as well as various battery form factors (cylindrical, pouch, and prismatic). We evaluate seven different battery types in total. The manufacturing variability and the presence of battery defects can be observed via this dataset. This dataset may be of interest to scientists and engineers working on battery technology, computer vision, or both.
Differentially Private Representation Learning via Image Captioning
Authors: Tom Sander, Yaodong Yu, Maziar Sanjabi, Alain Durmus, Yi Ma, Kamalika Chaudhuri, Chuan Guo
Date: 2024-03-04 00:00:00
Tasks: Image Captioning, Representation Learning

Differentially private (DP) machine learning is considered the gold-standard solution for training a model from sensitive data while still preserving privacy. However, a major barrier to achieving this ideal is its sub-optimal privacy-accuracy trade-off, which is particularly visible in DP representation learning. Specifically, it has been shown that under modest privacy budgets, most models learn representations that are not significantly better than hand-crafted features. In this work, we show that effective DP representation learning can be done via image captioning and scaling up to internet-scale multimodal datasets. Through a series of engineering tricks, we successfully train a DP image captioner (DP-Cap) on a 233M subset of LAION-2B from scratch using a reasonable amount of computation, and obtaining unprecedented high-quality image features that can be used in a variety of downstream vision and vision-language tasks. For example, under a privacy budget of $\varepsilon=8$ for the LAION dataset, a linear classifier trained on top of learned DP-Cap features attains $65.8\%$ accuracy on ImageNet-1K, considerably improving the previous SOTA of $56.5\%$.
When do Convolutional Neural Networks Stop Learning?
Authors: Sahan Ahmad, Gabriel Trahan, Aminul Islam
Date: 2024-03-04 00:00:00
Tasks: image-classification, Image Classification, Medical Image Analysis

Convolutional Neural Networks (CNNs) have demonstrated outstanding performance in computer vision tasks such as image classification, detection, segmentation, and medical image analysis. In general, an arbitrary number of epochs is used to train such neural networks. In a single epoch, the entire training data -- divided by batch size -- are fed to the network. In practice, validation error with training loss is used to estimate the neural network's generalization, which indicates the optimal learning capacity of the network. Current practice is to stop training when the training loss decreases and the gap between training and validation error increases (i.e., the generalization gap) to avoid overfitting. However, this is a trial-and-error-based approach which raises a critical question: Is it possible to estimate when neural networks stop learning based on training data? This research work introduces a hypothesis that analyzes the data variation across all the layers of a CNN variant to anticipate its near-optimal learning capacity. In the training phase, we use our hypothesis to anticipate the near-optimal learning capacity of a CNN variant without using any validation data. Our hypothesis can be deployed as a plug-and-play to any existing CNN variant without introducing additional trainable parameters to the network. We test our hypothesis on six different CNN variants and three different general image datasets (CIFAR10, CIFAR100, and SVHN). The result based on these CNN variants and datasets shows that our hypothesis saves 58.49\% of computational time (on average) in training. We further conduct our hypothesis on ten medical image datasets and compared with the MedMNIST-V2 benchmark. Based on our experimental result, we save $\approx$ 44.1\% of computational time without losing accuracy against the MedMNIST-V2 benchmark.
Vision-Language Models for Medical Report Generation and Visual Question Answering: A Review
Authors: Iryna Hartsock, Ghulam Rasool
Date: 2024-03-04 00:00:00
Tasks: Medical Report Generation, Question Answering, Visual Question Answering, Visual Question Answering (VQA)

Medical vision-language models (VLMs) combine computer vision (CV) and natural language processing (NLP) to analyze visual and textual medical data. Our paper reviews recent advancements in developing VLMs specialized for healthcare, focusing on models designed for medical report generation and visual question answering (VQA). We provide background on NLP and CV, explaining how techniques from both fields are integrated into VLMs to enable learning from multimodal data. Key areas we address include the exploration of medical vision-language datasets, in-depth analyses of architectures and pre-training strategies employed in recent noteworthy medical VLMs, and comprehensive discussion on evaluation metrics for assessing VLMs' performance in medical report generation and VQA. We also highlight current challenges and propose future directions, including enhancing clinical validity and addressing patient privacy concerns. Overall, our review summarizes recent progress in developing VLMs to harness multimodal medical data for improved healthcare applications.
Optimizing Illuminant Estimation in Dual-Exposure HDR Imaging
Authors: Mahmoud Afifi, Zhenhua Hu, Liang Liang
Date: 2024-03-04 00:00:00
Tasks: Color Constancy

High dynamic range (HDR) imaging involves capturing a series of frames of the same scene, each with different exposure settings, to broaden the dynamic range of light. This can be achieved through burst capturing or using staggered HDR sensors that capture long and short exposures simultaneously in the camera image signal processor (ISP). Within camera ISP pipeline, illuminant estimation is a crucial step aiming to estimate the color of the global illuminant in the scene. This estimation is used in camera ISP white-balance module to remove undesirable color cast in the final image. Despite the multiple frames captured in the HDR pipeline, conventional illuminant estimation methods often rely only on a single frame of the scene. In this paper, we explore leveraging information from frames captured with different exposure times. Specifically, we introduce a simple feature extracted from dual-exposure images to guide illuminant estimators, referred to as the dual-exposure feature (DEF). To validate the efficiency of DEF, we employed two illuminant estimators using the proposed DEF: 1) a multilayer perceptron network (MLP), referred to as exposure-based MLP (EMLP), and 2) a modified version of the convolutional color constancy (CCC) to integrate our DEF, that we call ECCC. Both EMLP and ECCC achieve promising results, in some cases surpassing prior methods that require hundreds of thousands or millions of parameters, with only a few hundred parameters for EMLP and a few thousand parameters for ECCC.
On Latency Predictors for Neural Architecture Search
Authors: Yash Akhauri, Mohamed S. Abdelfattah
Date: 2024-03-04 00:00:00
Tasks: Hardware Aware Neural Architecture Search, Meta-Learning, Neural Architecture Search, Prediction, Transfer Learning

Efficient deployment of neural networks (NN) requires the co-optimization of accuracy and latency. For example, hardware-aware neural architecture search has been used to automatically find NN architectures that satisfy a latency constraint on a specific hardware device. Central to these search algorithms is a prediction model that is designed to provide a hardware latency estimate for a candidate NN architecture. Recent research has shown that the sample efficiency of these predictive models can be greatly improved through pre-training on some \textit{training} devices with many samples, and then transferring the predictor on the \textit{test} (target) device. Transfer learning and meta-learning methods have been used for this, but often exhibit significant performance variability. Additionally, the evaluation of existing latency predictors has been largely done on hand-crafted training/test device sets, making it difficult to ascertain design features that compose a robust and general latency predictor. To address these issues, we introduce a comprehensive suite of latency prediction tasks obtained in a principled way through automated partitioning of hardware device sets. We then design a general latency predictor to comprehensively study (1) the predictor architecture, (2) NN sample selection methods, (3) hardware device representations, and (4) NN operation encoding schemes. Building on conclusions from our study, we present an end-to-end latency predictor training strategy that outperforms existing methods on 11 out of 12 difficult latency prediction tasks, improving latency prediction by 22.5\% on average, and up to to 87.6\% on the hardest tasks. Focusing on latency prediction, our HW-Aware NAS reports a $5.8\times$ speedup in wall-clock time. Our code is available on \href{https://github.com/abdelfattah-lab/nasflat_latency}{https://github.com/abdelfattah-lab/nasflat\_latency}.
NiNformer: A Network in Network Transformer with Token Mixing Generated Gating Function
Authors: Abdullah Nazhat Abdullah, Tarkan Aydin
Date: 2024-03-04 00:00:00
Tasks: image-classification, Image Classification, Image Generation, object-detection, Object Detection

The attention mechanism is the primary component of the transformer architecture; it has led to significant advancements in deep learning spanning many domains and covering multiple tasks. In computer vision, the attention mechanism was first incorporated in the Vision Transformer ViT, and then its usage has expanded into many tasks in the vision domain, such as classification, segmentation, object detection, and image generation. While the attention mechanism is very expressive and capable, it comes with the disadvantage of being computationally expensive and requiring datasets of considerable size for effective optimization. To address these shortcomings, many designs have been proposed in the literature to reduce the computational burden and alleviate the data size requirements. Examples of such attempts in the vision domain are the MLP-Mixer, the Conv-Mixer, the Perciver-IO, and many more attempts with different sets of advantages and disadvantages. This paper introduces a new computational block as an alternative to the standard ViT block. The newly proposed block reduces the computational requirements by replacing the normal attention layers with a Network in Network structure, therefore enhancing the static approach of the MLP-Mixer with a dynamic learning of element-wise gating function generated by a token mixing process. Extensive experimentation shows that the proposed design provides better performance than the baseline architectures on multiple datasets applied in the image classification task of the vision domain.
A Spatio-temporal Aligned SUNet Model for Low-light Video Enhancement
Authors: Ruirui Lin, Nantheera Anantrasirichai, Alexandra Malyugina, David Bull
Date: 2024-03-04 00:00:00
Tasks: SSIM, Video Enhancement

Distortions caused by low-light conditions are not only visually unpleasant but also degrade the performance of computer vision tasks. The restoration and enhancement have proven to be highly beneficial. However, there are only a limited number of enhancement methods explicitly designed for videos acquired in low-light conditions. We propose a Spatio-Temporal Aligned SUNet (STA-SUNet) model using a Swin Transformer as a backbone to capture low light video features and exploit their spatio-temporal correlations. The STA-SUNet model is trained on a novel, fully registered dataset (BVI), which comprises dynamic scenes captured under varying light conditions. It is further analysed comparatively against various other models over three test datasets. The model demonstrates superior adaptivity across all datasets, obtaining the highest PSNR and SSIM values. It is particularly effective in extreme low-light conditions, yielding fairly good visualisation results.
COMMIT: Certifying Robustness of Multi-Sensor Fusion Systems against Semantic Attacks
Authors: Zijian Huang, Wenda Chu, Linyi Li, Chejian Xu, Bo Li
Date: 2024-03-04 00:00:00
Tasks: Autonomous Vehicles, object-detection, Object Detection, Sensor Fusion

Multi-sensor fusion systems (MSFs) play a vital role as the perception module in modern autonomous vehicles (AVs). Therefore, ensuring their robustness against common and realistic adversarial semantic transformations, such as rotation and shifting in the physical world, is crucial for the safety of AVs. While empirical evidence suggests that MSFs exhibit improved robustness compared to single-modal models, they are still vulnerable to adversarial semantic transformations. Despite the proposal of empirical defenses, several works show that these defenses can be attacked again by new adaptive attacks. So far, there is no certified defense proposed for MSFs. In this work, we propose the first robustness certification framework COMMIT certify robustness of multi-sensor fusion systems against semantic attacks. In particular, we propose a practical anisotropic noise mechanism that leverages randomized smoothing with multi-modal data and performs a grid-based splitting method to characterize complex semantic transformations. We also propose efficient algorithms to compute the certification in terms of object detection accuracy and IoU for large-scale MSF models. Empirically, we evaluate the efficacy of COMMIT in different settings and provide a comprehensive benchmark of certified robustness for different MSF models using the CARLA simulation platform. We show that the certification for MSF models is at most 48.39% higher than that of single-modal models, which validates the advantages of MSF models. We believe our certification framework and benchmark will contribute an important step towards certifiably robust AVs in practice.