pwc-archive/papers-with-abstracts huggingface dataset:
GAMedX: Generative AI-based Medical Entity Data Extractor Using Large Language Models
Authors: Mohammed-Khalil Ghali, Abdelrahman Farrag, Hajar Sakai, Hicham El Baz, Yu Jin, Sarah Lam
Date: 2024-05-31 00:00:00
Tasks: named-entity-recognition, Named Entity Recognition, Named Entity Recognition (NER), Navigate, NER

In the rapidly evolving field of healthcare and beyond, the integration of generative AI in Electronic Health Records (EHRs) represents a pivotal advancement, addressing a critical gap in current information extraction techniques. This paper introduces GAMedX, a Named Entity Recognition (NER) approach utilizing Large Language Models (LLMs) to efficiently extract entities from medical narratives and unstructured text generated throughout various phases of the patient hospital visit. By addressing the significant challenge of processing unstructured medical text, GAMedX leverages the capabilities of generative AI and LLMs for improved data extraction. Employing a unified approach, the methodology integrates open-source LLMs for NER, utilizing chained prompts and Pydantic schemas for structured output to navigate the complexities of specialized medical jargon. The findings reveal significant ROUGE F1 score on one of the evaluation datasets with an accuracy of 98\%. This innovation enhances entity extraction, offering a scalable, cost-effective solution for automated forms filling from unstructured data. As a result, GAMedX streamlines the processing of unstructured narratives, and sets a new standard in NER applications, contributing significantly to theoretical and practical advancements beyond the medical technology sphere.
Disrupting Diffusion: Token-Level Attention Erasure Attack against Diffusion-based Customization
Authors: Yisu Liu, Jinyang An, Wanqian Zhang, Dayan Wu, Jingzi Gu, Zheng Lin, Weiping Wang
Date: 2024-05-31 00:00:00
Tasks: Adversarial Attack, Image Generation

With the development of diffusion-based customization methods like DreamBooth, individuals now have access to train the models that can generate their personalized images. Despite the convenience, malicious users have misused these techniques to create fake images, thereby triggering a privacy security crisis. In light of this, proactive adversarial attacks are proposed to protect users against customization. The adversarial examples are trained to distort the customization model's outputs and thus block the misuse. In this paper, we propose DisDiff (Disrupting Diffusion), a novel adversarial attack method to disrupt the diffusion model outputs. We first delve into the intrinsic image-text relationships, well-known as cross-attention, and empirically find that the subject-identifier token plays an important role in guiding image generation. Thus, we propose the Cross-Attention Erasure module to explicitly "erase" the indicated attention maps and disrupt the text guidance. Besides,we analyze the influence of the sampling process of the diffusion model on Projected Gradient Descent (PGD) attack and introduce a novel Merit Sampling Scheduler to adaptively modulate the perturbation updating amplitude in a step-aware manner. Our DisDiff outperforms the state-of-the-art methods by 12.75% of FDFR scores and 7.25% of ISM scores across two facial benchmarks and two commonly used prompts on average.
The Point of View of a Sentiment: Towards Clinician Bias Detection in Psychiatric Notes
Authors: Alissa A. Valentine, Lauren A. Lepow, Alexander W. Charney, Isotta Landi
Date: 2024-05-31 00:00:00
Tasks: Bias Detection, In-Context Learning

In psychiatry, negative patient descriptions and stigmatizing language can contribute to healthcare disparities in two ways: (1) read by patients they can harm their trust and engagement with the medical center; (2) read by future providers they may negatively influence the future perspective of a patient. By leveraging large language models, this work aims to identify the sentiment expressed in psychiatric clinical notes based on the reader's point of view. Extracting sentences from the Mount Sinai Health System's large and diverse clinical notes, we used prompts and in-context learning to adapt three large language models (GPT-3.5, Llama 2, Mistral) to classify the sentiment conveyed by the sentences according to the provider or non-provider point of view. Results showed that GPT-3.5 aligns best to provider point of view, whereas Mistral aligns best to non-provider point of view.
Open Ko-LLM Leaderboard: Evaluating Large Language Models in Korean with Ko-H5 Benchmark
Authors: Chanjun Park, Hyeonwoo Kim, Dahyun Kim, Seonghwan Cho, Sanghoon Kim, Sukyung Lee, Yungi Kim, Hwalsuk Lee
Date: 2024-05-31 00:00:00
Tasks: Diversity

This paper introduces the Open Ko-LLM Leaderboard and the Ko-H5 Benchmark as vital tools for evaluating Large Language Models (LLMs) in Korean. Incorporating private test sets while mirroring the English Open LLM Leaderboard, we establish a robust evaluation framework that has been well integrated in the Korean LLM community. We perform data leakage analysis that shows the benefit of private test sets along with a correlation study within the Ko-H5 benchmark and temporal analyses of the Ko-H5 score. Moreover, we present empirical support for the need to expand beyond set benchmarks. We hope the Open Ko-LLM Leaderboard sets precedent for expanding LLM evaluation to foster more linguistic diversity.
Can Machine Learning Assist in Diagnosis of Primary Immune Thrombocytopenia? A feasibility study
Authors: Haroon Miah, Dimitrios Kollias, Giacinto Luca Pedone, Drew Provan, Frederick Chen
Date: 2024-05-31 00:00:00
Tasks: Fairness

Primary Immune thrombocytopenia (ITP) is a rare autoimmune disease characterised by immune-mediated destruction of peripheral blood platelets in patients leading to low platelet counts and bleeding. The diagnosis and effective management of ITP is challenging because there is no established test to confirm the disease and no biomarker with which one can predict the response to treatment and outcome. In this work we conduct a feasibility study to check if machine learning can be applied effectively for diagnosis of ITP using routine blood tests and demographic data in a non-acute outpatient setting. Various ML models, including Logistic Regression, Support Vector Machine, k-Nearest Neighbor, Decision Tree and Random Forest, were applied to data from the UK Adult ITP Registry and a general hematology clinic. Two different approaches were investigated: a demographic-unaware and a demographic-aware one. We conduct extensive experiments to evaluate the predictive performance of these models and approaches, as well as their bias. The results revealed that Decision Tree and Random Forest models were both superior and fair, achieving nearly perfect predictive and fairness scores, with platelet count identified as the most significant variable. Models not provided with demographic information performed better in terms of predictive accuracy but showed lower fairness score, illustrating a trade-off between predictive performance and fairness.
Certifying Global Robustness for Deep Neural Networks
Authors: You Li, Guannan Zhao, Shuyu Kong, Yunqi He, Hai Zhou
Date: 2024-05-31 00:00:00

A globally robust deep neural network resists perturbations on all meaningful inputs. Current robustness certification methods emphasize local robustness, struggling to scale and generalize. This paper presents a systematic and efficient method to evaluate and verify global robustness for deep neural networks, leveraging the PAC verification framework for solid guarantees on verification results. We utilize probabilistic programs to characterize meaningful input regions, setting a realistic standard for global robustness. Additionally, we introduce the cumulative robustness curve as a criterion in evaluating global robustness. We design a statistical method that combines multi-level splitting and regression analysis for the estimation, significantly reducing the execution time. Experimental results demonstrate the efficiency and effectiveness of our verification method and its capability to find rare and diversified counterexamples for adversarial training.
Towards a General Recipe for Combinatorial Optimization with Multi-Filter GNNs
Authors: Frederik Wenkel, Semih Cantürk, Stefan Horoi, Michael Perlmutter, Guy Wolf
Date: 2024-05-31 00:00:00
Tasks: Combinatorial Optimization, Graph Classification, Link Prediction, Node Classification, Self-Supervised Learning

Graph neural networks (GNNs) have achieved great success for a variety of tasks such as node classification, graph classification, and link prediction. However, the use of GNNs (and machine learning more generally) to solve combinatorial optimization (CO) problems is much less explored. Here, we introduce GCON, a novel GNN architecture that leverages a complex filter bank and localized attention mechanisms to solve CO problems on graphs. We show how our method differentiates itself from prior GNN-based CO solvers and how it can be effectively applied to the maximum cut, minimum dominating set, and maximum clique problems in a unsupervised learning setting. GCON is competitive across all tasks and consistently outperforms other specialized GNN-based approaches, and is on par with the powerful Gurobi solver on the max-cut problem. We provide an open-source implementation of our work at https://github.com/WenkelF/copt.
Unveiling the Impact of Coding Data Instruction Fine-Tuning on Large Language Models Reasoning
Authors: Xinlu Zhang, Zhiyu Zoey Chen, Xi Ye, Xianjun Yang, Lichang Chen, William Yang Wang, Linda Ruth Petzold
Date: 2024-05-30 00:00:00

Instruction Fine-Tuning (IFT) significantly enhances the zero-shot capabilities of pretrained Large Language Models (LLMs). While coding data is known to boost LLM reasoning abilities during pretraining, its role in activating internal reasoning capacities during IFT remains understudied. This paper investigates a key question: How does coding data impact LLMs' reasoning capacities during IFT stage? To explore this, we thoroughly examine the impact of coding data across different coding data proportions, model families, sizes, and reasoning domains, from various perspectives. Specifically, we create three IFT datasets with increasing coding data proportions, fine-tune six LLM backbones across different families and scales on these datasets, evaluate the tuned models' performance across twelve tasks in three reasoning domains, and analyze the outcomes from three broad-to-granular perspectives: overall, domain-level, and task-specific. Our holistic analysis provides valuable insights into each perspective. First, coding data tuning enhances the overall reasoning capabilities of LLMs across different model families and scales. Moreover, while the impact of coding data varies by domain, it shows consistent trends within each domain across different model families and scales. Additionally, coding data generally provides comparable task-specific benefits across model families, with optimal proportions in IFT datasets being task-dependent.
An Automatic Question Usability Evaluation Toolkit
Authors: Steven Moore, Eamon Costello, Huy A. Nguyen, John Stamper
Date: 2024-05-30 00:00:00
Tasks: Multiple-choice, Word Embeddings

Evaluating multiple-choice questions (MCQs) involves either labor intensive human assessments or automated methods that prioritize readability, often overlooking deeper question design flaws. To address this issue, we introduce the Scalable Automatic Question Usability Evaluation Toolkit (SAQUET), an open-source tool that leverages the Item-Writing Flaws (IWF) rubric for a comprehensive and automated quality evaluation of MCQs. By harnessing the latest in large language models such as GPT-4, advanced word embeddings, and Transformers designed to analyze textual complexity, SAQUET effectively pinpoints and assesses a wide array of flaws in MCQs. We first demonstrate the discrepancy between commonly used automated evaluation metrics and the human assessment of MCQ quality. Then we evaluate SAQUET on a diverse dataset of MCQs across the five domains of Chemistry, Statistics, Computer Science, Humanities, and Healthcare, showing how it effectively distinguishes between flawed and flawless questions, providing a level of analysis beyond what is achievable with traditional metrics. With an accuracy rate of over 94% in detecting the presence of flaws identified by human evaluators, our findings emphasize the limitations of existing evaluation methods and showcase potential in improving the quality of educational assessments.
Towards Ontology-Enhanced Representation Learning for Large Language Models
Authors: Francesco Ronzano, Jay Nanavati
Date: 2024-05-30 00:00:00
Tasks: Contrastive Learning, Language Modeling, Language Modelling, Large Language Model, Representation Learning

Taking advantage of the widespread use of ontologies to organise and harmonize knowledge across several distinct domains, this paper proposes a novel approach to improve an embedding-Large Language Model (embedding-LLM) of interest by infusing the knowledge formalized by a reference ontology: ontological knowledge infusion aims at boosting the ability of the considered LLM to effectively model the knowledge domain described by the infused ontology. The linguistic information (i.e. concept synonyms and descriptions) and structural information (i.e. is-a relations) formalized by the ontology are utilized to compile a comprehensive set of concept definitions, with the assistance of a powerful generative LLM (i.e. GPT-3.5-turbo). These concept definitions are then employed to fine-tune the target embedding-LLM using a contrastive learning framework. To demonstrate and evaluate the proposed approach, we utilize the biomedical disease ontology MONDO. The results show that embedding-LLMs enhanced by ontological disease knowledge exhibit an improved capability to effectively evaluate the similarity of in-domain sentences from biomedical documents mentioning diseases, without compromising their out-of-domain performance.
Automated Generation and Tagging of Knowledge Components from Multiple-Choice Questions
Authors: Steven Moore, Robin Schmucker, Tom Mitchell, John Stamper
Date: 2024-05-30 00:00:00
Tasks: Language Modelling, Large Language Model, Multiple-choice

Knowledge Components (KCs) linked to assessments enhance the measurement of student learning, enrich analytics, and facilitate adaptivity. However, generating and linking KCs to assessment items requires significant effort and domain-specific knowledge. To streamline this process for higher-education courses, we employed GPT-4 to generate KCs for multiple-choice questions (MCQs) in Chemistry and E-Learning. We analyzed discrepancies between the KCs generated by the Large Language Model (LLM) and those made by humans through evaluation from three domain experts in each subject area. This evaluation aimed to determine whether, in instances of non-matching KCs, evaluators showed a preference for the LLM-generated KCs over their human-created counterparts. We also developed an ontology induction algorithm to cluster questions that assess similar KCs based on their content. Our most effective LLM strategy accurately matched KCs for 56% of Chemistry and 35% of E-Learning MCQs, with even higher success when considering the top five KC suggestions. Human evaluators favored LLM-generated KCs, choosing them over human-assigned ones approximately two-thirds of the time, a preference that was statistically significant across both domains. Our clustering algorithm successfully grouped questions by their underlying KCs without needing explicit labels or contextual information. This research advances the automation of KC generation and classification for assessment items, alleviating the need for student data or predefined KC labels.
Diffusion On Syntax Trees For Program Synthesis
Authors: Shreyas Kapur, Erik Jenner, Stuart Russell
Date: 2024-05-30 00:00:00
Tasks: Program Synthesis

Large language models generate code one token at a time. Their autoregressive generation process lacks the feedback of observing the program's output. Training LLMs to suggest edits directly can be challenging due to the scarcity of rich edit data. To address these problems, we propose neural diffusion models that operate on syntax trees of any context-free grammar. Similar to image diffusion models, our method also inverts ``noise'' applied to syntax trees. Rather than generating code sequentially, we iteratively edit it while preserving syntactic validity, which makes it easy to combine this neural model with search. We apply our approach to inverse graphics tasks, where our model learns to convert images into programs that produce those images. Combined with search, our model is able to write graphics programs, see the execution result, and debug them to meet the required specifications. We additionally show how our system can write graphics programs for hand-drawn sketches.
Deep Modeling of Non-Gaussian Aleatoric Uncertainty
Authors: Aastha Acharya, Caleb Lee, Marissa D'Alonzo, Jared Shamwell, Nisar R. Ahmed, Rebecca Russell
Date: 2024-05-30 00:00:00
Tasks: Deep Learning, State Estimation

Deep learning offers promising new ways to accurately model aleatoric uncertainty in robotic state estimation systems, particularly when the uncertainty distributions do not conform to traditional assumptions of being fixed and Gaussian. In this study, we formulate and evaluate three fundamental deep learning approaches for conditional probability density modeling to quantify non-Gaussian aleatoric uncertainty: parametric, discretized, and generative modeling. We systematically compare the respective strengths and weaknesses of these three methods on simulated non-Gaussian densities as well as on real-world terrain-relative navigation data. Our results show that these deep learning methods can accurately capture complex uncertainty patterns, highlighting their potential for improving the reliability and robustness of estimation systems.
ShelfHelp: Empowering Humans to Perform Vision-Independent Manipulation Tasks with a Socially Assistive Robotic Cane
Authors: Shivendra Agrawal, Suresh Nayak, Ashutosh Naik, Bradley Hayes
Date: 2024-05-30 00:00:00

The ability to shop independently, especially in grocery stores, is important for maintaining a high quality of life. This can be particularly challenging for people with visual impairments (PVI). Stores carry thousands of products, with approximately 30,000 new products introduced each year in the US market alone, presenting a challenge even for modern computer vision solutions. Through this work, we present a proof-of-concept socially assistive robotic system we call ShelfHelp, and propose novel technical solutions for enhancing instrumented canes traditionally meant for navigation tasks with additional capability within the domain of shopping. ShelfHelp includes a novel visual product locator algorithm designed for use in grocery stores and a novel planner that autonomously issues verbal manipulation guidance commands to guide the user during product retrieval. Through a human subjects study, we show the system's success in locating and providing effective manipulation guidance to retrieve desired products with novice users. We compare two autonomous verbal guidance modes achieving comparable performance to a human assistance baseline and present encouraging findings that validate our system's efficiency and effectiveness and through positive subjective metrics including competence, intelligence, and ease of use.
Slight Corruption in Pre-training Data Makes Better Diffusion Models
Authors: Hao Chen, Yujin Han, Diganta Misra, Xiang Li, Kai Hu, Difan Zou, Masashi Sugiyama, Jindong Wang, Bhiksha Raj
Date: 2024-05-30 00:00:00

Diffusion models (DMs) have shown remarkable capabilities in generating realistic high-quality images, audios, and videos. They benefit significantly from extensive pre-training on large-scale datasets, including web-crawled data with paired data and conditions, such as image-text and image-class pairs. Despite rigorous filtering, these pre-training datasets often inevitably contain corrupted pairs where conditions do not accurately describe the data. This paper presents the first comprehensive study on the impact of such corruption in pre-training data of DMs. We synthetically corrupt ImageNet-1K and CC3M to pre-train and evaluate over 50 conditional DMs. Our empirical findings reveal that various types of slight corruption in pre-training can significantly enhance the quality, diversity, and fidelity of the generated images across different DMs, both during pre-training and downstream adaptation stages. Theoretically, we consider a Gaussian mixture model and prove that slight corruption in the condition leads to higher entropy and a reduced 2-Wasserstein distance to the ground truth of the data distribution generated by the corruptly trained DMs. Inspired by our analysis, we propose a simple method to improve the training of DMs on practical datasets by adding condition embedding perturbations (CEP). CEP significantly improves the performance of various DMs in both pre-training and downstream tasks. We hope that our study provides new insights into understanding the data and pre-training processes of DMs and all models are released at https://huggingface.co/DiffusionNoise.
Probabilities of Causation for Continuous and Vector Variables
Authors: Yuta Kawakami, manabu kuroki, Jin Tian
Date: 2024-05-30 00:00:00
Tasks: counterfactual, Decision Making, Explainable artificial intelligence

Probabilities of causation (PoC) are valuable concepts for explainable artificial intelligence and practical decision-making. PoC are originally defined for scalar binary variables. In this paper, we extend the concept of PoC to continuous treatment and outcome variables, and further generalize PoC to capture causal effects between multiple treatments and multiple outcomes. In addition, we consider PoC for a sub-population and PoC with multi-hypothetical terms to capture more sophisticated counterfactual information useful for decision-making. We provide a nonparametric identification theorem for each type of PoC we introduce. Finally, we illustrate the application of our results on a real-world dataset about education.
ENTIRe-ID: An Extensive and Diverse Dataset for Person Re-Identification
Authors: Serdar Yildiz, Ahmet Nezih Kasim
Date: 2024-05-30 00:00:00
Tasks: Person Re-Identification

The growing importance of person reidentification in computer vision has highlighted the need for more extensive and diverse datasets. In response, we introduce the ENTIRe-ID dataset, an extensive collection comprising over 4.45 million images from 37 different cameras in varied environments. This dataset is uniquely designed to tackle the challenges of domain variability and model generalization, areas where existing datasets for person re-identification have fallen short. The ENTIRe-ID dataset stands out for its coverage of a wide array of real-world scenarios, encompassing various lighting conditions, angles of view, and diverse human activities. This design ensures a realistic and robust training platform for ReID models. The ENTIRe-ID dataset is publicly available at https://serdaryildiz.github.io/ENTIRe-ID