pwc-archive/papers-with-abstracts huggingface dataset:
A False Discovery Rate Control Method Using a Fully Connected Hidden Markov Random Field for Neuroimaging Data
Authors: Taehyo Kim, Qiran Jia, Mony J. de Leon, Hai Shu
Date: 2025-05-27 00:00:00
Tasks: Computational Efficiency

False discovery rate (FDR) control methods are essential for voxel-wise multiple testing in neuroimaging data analysis, where hundreds of thousands or even millions of tests are conducted to detect brain regions associated with disease-related changes. Classical FDR control methods (e.g., BH, q-value, and LocalFDR) assume independence among tests and often lead to high false non-discovery rates (FNR). Although various spatial FDR control methods have been developed to improve power, they still fall short of jointly addressing three major challenges in neuroimaging applications: capturing complex spatial dependencies, maintaining low variability in both false discovery proportion (FDP) and false non-discovery proportion (FNP) across replications, and achieving computational scalability for high-resolution data. To address these challenges, we propose fcHMRF-LIS, a powerful, stable, and scalable spatial FDR control method for voxel-wise multiple testing. It integrates the local index of significance (LIS)-based testing procedure with a novel fully connected hidden Markov random field (fcHMRF) designed to model complex spatial structures using a parsimonious parameterization. We develop an efficient expectation-maximization algorithm incorporating mean-field approximation, the Conditional Random Fields as Recurrent Neural Networks (CRF-RNN) technique, and permutohedral lattice filtering, reducing the time complexity from quadratic to linear in the number of tests. Extensive simulations demonstrate that fcHMRF-LIS achieves accurate FDR control, lower FNR, reduced variability in FDP and FNP, and a higher number of true positives compared to existing methods. Applied to an FDG-PET dataset from the Alzheimer's Disease Neuroimaging Initiative, fcHMRF-LIS identifies neurobiologically relevant brain regions and offers notable advantages in computational efficiency.
STACI: Spatio-Temporal Aleatoric Conformal Inference
Authors: Brandon R. Feng, David Keetae Park, Xihaier Luo, Arantxa Urdangarin, Shinjae Yoo, Brian J. Reich
Date: 2025-05-27 00:00:00
Tasks: Gaussian Processes, GPU, Prediction Intervals, Uncertainty Quantification, valid

Fitting Gaussian Processes (GPs) provides interpretable aleatoric uncertainty quantification for estimation of spatio-temporal fields. Spatio-temporal deep learning models, while scalable, typically assume a simplistic independent covariance matrix for the response, failing to capture the underlying correlation structure. However, spatio-temporal GPs suffer from issues of scalability and various forms of approximation bias resulting from restrictive assumptions of the covariance kernel function. We propose STACI, a novel framework consisting of a variational Bayesian neural network approximation of non-stationary spatio-temporal GP along with a novel spatio-temporal conformal inference algorithm. STACI is highly scalable, taking advantage of GPU training capabilities for neural network models, and provides statistically valid prediction intervals for uncertainty quantification. STACI outperforms competing GPs and deep methods in accurately approximating spatio-temporal processes and we show it easily scales to datasets with millions of observations.
Conditional Diffusion Models with Classifier-Free Gibbs-like Guidance
Authors: Badr Moufad, Yazid Janati, Alain Durmus, Ahmed Ghorbel, Eric Moulines, Jimmy Olsson
Date: 2025-05-27 00:00:00
Tasks: Audio Generation, Denoising, Diversity

Classifier-Free Guidance (CFG) is a widely used technique for improving conditional diffusion models by linearly combining the outputs of conditional and unconditional denoisers. While CFG enhances visual quality and improves alignment with prompts, it often reduces sample diversity, leading to a challenging trade-off between quality and diversity. To address this issue, we make two key contributions. First, CFG generally does not correspond to a well-defined denoising diffusion model (DDM). In particular, contrary to common intuition, CFG does not yield samples from the target distribution associated with the limiting CFG score as the noise level approaches zero -- where the data distribution is tilted by a power $w \gt 1$ of the conditional distribution. We identify the missing component: a R\'enyi divergence term that acts as a repulsive force and is required to correct CFG and render it consistent with a proper DDM. Our analysis shows that this correction term vanishes in the low-noise limit. Second, motivated by this insight, we propose a Gibbs-like sampling procedure to draw samples from the desired tilted distribution. This method starts with an initial sample from the conditional diffusion model without CFG and iteratively refines it, preserving diversity while progressively enhancing sample quality. We evaluate our approach on both image and text-to-audio generation tasks, demonstrating substantial improvements over CFG across all considered metrics. The code is available at https://github.com/yazidjanati/cfgig
Semi-supervised Clustering Through Representation Learning of Large-scale EHR Data
Authors: Linshanshan Wang, Mengyan Li, Zongqi Xia, Molei Liu, Tianxi Cai
Date: 2025-05-27 00:00:00
Tasks: Representation Learning

Electronic Health Records (EHR) offer rich real-world data for personalized medicine, providing insights into disease progression, treatment responses, and patient outcomes. However, their sparsity, heterogeneity, and high dimensionality make them difficult to model, while the lack of standardized ground truth further complicates predictive modeling. To address these challenges, we propose SCORE, a semi-supervised representation learning framework that captures multi-domain disease profiles through patient embeddings. SCORE employs a Poisson-Adapted Latent factor Mixture (PALM) Model with pre-trained code embeddings to characterize codified features and extract meaningful patient phenotypes and embeddings. To handle the computational challenges of large-scale data, it introduces a hybrid Expectation-Maximization (EM) and Gaussian Variational Approximation (GVA) algorithm, leveraging limited labeled data to refine estimates on a vast pool of unlabeled samples. We theoretically establish the convergence of this hybrid approach, quantify GVA errors, and derive SCORE's error rate under diverging embedding dimensions. Our analysis shows that incorporating unlabeled data enhances accuracy and reduces sensitivity to label scarcity. Extensive simulations confirm SCORE's superior finite-sample performance over existing methods. Finally, we apply SCORE to predict disability status for patients with multiple sclerosis (MS) using partially labeled EHR data, demonstrating that it produces more informative and predictive patient embeddings for multiple MS-related conditions compared to existing approaches.
How Can I Publish My LLM Benchmark Without Giving the True Answers Away?
Authors: Takashi Ishida, Thanawat Lodkaew, Ikko Yamane
Date: 2025-05-23 00:00:00
Tasks: Large Language Model

Publishing a large language model (LLM) benchmark on the Internet risks contaminating future LLMs: the benchmark may be unintentionally (or intentionally) used to train or select a model. A common mitigation is to keep the benchmark private and let participants submit their models or predictions to the organizers. However, this strategy will require trust in a single organization and still permits test-set overfitting through repeated queries. To overcome this issue, we propose a way to publish benchmarks without completely disclosing the ground-truth answers to the questions, while still maintaining the ability to openly evaluate LLMs. Our main idea is to inject randomness to the answers by preparing several logically correct answers, and only include one of them as the solution in the benchmark. This reduces the best possible accuracy, i.e., Bayes accuracy, of the benchmark. Not only is this helpful to keep us from disclosing the ground truth, but this approach also offers a test for detecting data contamination. In principle, even fully capable models should not surpass the Bayes accuracy. If a model surpasses this ceiling despite this expectation, this is a strong signal of data contamination. We present experimental evidence that our method can detect data contamination accurately on a wide range of benchmarks, models, and training methodologies.
M-learner:A Flexible And Powerful Framework To Study Heterogeneous Treatment Effect In Mediation Model
Authors: Xingyu Li, Qing Liu, Tony Jiang, Hong Amy Xia, Brian P. Hobbs, Peng Wei
Date: 2025-05-23 00:00:00

We propose a novel method, termed the M-learner, for estimating heterogeneous indirect and total treatment effects and identifying relevant subgroups within a mediation framework. The procedure comprises four key steps. First, we compute individual-level conditional average indirect/total treatment effect Second, we construct a distance matrix based on pairwise differences. Third, we apply tSNE to project this matrix into a low-dimensional Euclidean space, followed by K-means clustering to identify subgroup structures. Finally, we calibrate and refine the clusters using a threshold-based procedure to determine the optimal configuration. To the best of our knowledge, this is the first approach specifically designed to capture treatment effect heterogeneity in the presence of mediation. Experimental results validate the robustness and effectiveness of the proposed framework. Application to the real-world Jobs II dataset highlights the broad adaptability and potential applicability of our method.Code is available at https: //anonymous.4open.science/r/M-learner-C4BB.
Efficient Adaptive Experimentation with Non-Compliance
Authors: Miruna Oprescu, Brian M Cho, Nathan Kallus
Date: 2025-05-23 00:00:00
Tasks: valid

We study the problem of estimating the average treatment effect (ATE) in adaptive experiments where treatment can only be encouraged--rather than directly assigned--via a binary instrumental variable. Building on semiparametric efficiency theory, we derive the efficiency bound for ATE estimation under arbitrary, history-dependent instrument-assignment policies, and show it is minimized by a variance-aware allocation rule that balances outcome noise and compliance variability. Leveraging this insight, we introduce AMRIV--an \textbf{A}daptive, \textbf{M}ultiply-\textbf{R}obust estimator for \textbf{I}nstrumental-\textbf{V}ariable settings with variance-optimal assignment. AMRIV pairs (i) an online policy that adaptively approximates the optimal allocation with (ii) a sequential, influence-function-based estimator that attains the semiparametric efficiency bound while retaining multiply-robust consistency. We establish asymptotic normality, explicit convergence rates, and anytime-valid asymptotic confidence sequences that enable sequential inference. Finally, we demonstrate the practical effectiveness of our approach through empirical studies, showing that adaptive instrument assignment, when combined with the AMRIV estimator, yields improved efficiency and robustness compared to existing baselines.
A Position Paper on the Automatic Generation of Machine Learning Leaderboards
Authors: Roelien C Timmer, Yufang Hou, Stephen Wan
Date: 2025-05-23 00:00:00
Tasks: Benchmarking, Position

An important task in machine learning (ML) research is comparing prior work, which is often performed via ML leaderboards: a tabular overview of experiments with comparable conditions (e.g., same task, dataset, and metric). However, the growing volume of literature creates challenges in creating and maintaining these leaderboards. To ease this burden, researchers have developed methods to extract leaderboard entries from research papers for automated leaderboard curation. Yet, prior work varies in problem framing, complicating comparisons and limiting real-world applicability. In this position paper, we present the first overview of Automatic Leaderboard Generation (ALG) research, identifying fundamental differences in assumptions, scope, and output formats. We propose an ALG unified conceptual framework to standardise how the ALG task is defined. We offer ALG benchmarking guidelines, including recommendations for datasets and metrics that promote fair, reproducible evaluation. Lastly, we outline challenges and new directions for ALG, such as, advocating for broader coverage by including all reported results and richer metadata.
Using Cross-Domain Detection Loss to Infer Multi-Scale Information for Improved Tiny Head Tracking
Authors: Jisu Kim, Alex Mattingly, Eung-Joo Lee, Benjamin S. Riggan
Date: 2025-05-14 00:00:00
Tasks: Head Detection, Multiple Object Tracking, Object Tracking

Head detection and tracking are essential for downstream tasks, but current methods often require large computational budgets, which increase latencies and ties up resources (e.g., processors, memory, and bandwidth). To address this, we propose a framework to enhance tiny head detection and tracking by optimizing the balance between performance and efficiency. Our framework integrates (1) a cross-domain detection loss, (2) a multi-scale module, and (3) a small receptive field detection mechanism. These innovations enhance detection by bridging the gap between large and small detectors, capturing high-frequency details at multiple scales during training, and using filters with small receptive fields to detect tiny heads. Evaluations on the CroHD and CrowdHuman datasets show improved Multiple Object Tracking Accuracy (MOTA) and mean Average Precision (mAP), demonstrating the effectiveness of our approach in crowded scenes.
Frequency-Adaptive Discrete Cosine-ViT-ResNet Architecture for Sparse-Data Vision
Authors: Ziyue Kang, Weichuan Zhang
Date: 2025-05-28 00:00:00
Tasks: image-classification, Image Classification

A major challenge in rare animal image classification is the scarcity of data, as many species usually have only a small number of labeled samples. To address this challenge, we designed a hybrid deep-learning framework comprising a novel adaptive DCT preprocessing module, ViT-B16 and ResNet50 backbones, and a Bayesian linear classification head. To our knowledge, we are the first to introduce an adaptive frequency-domain selection mechanism that learns optimal low-, mid-, and high-frequency boundaries suited to the subsequent backbones. Our network first captures image frequency-domain cues via this adaptive DCT partitioning. The adaptively filtered frequency features are then fed into ViT-B16 to model global contextual relationships, while ResNet50 concurrently extracts local, multi-scale spatial representations from the original image. A cross-level fusion strategy seamlessly integrates these frequency- and spatial-domain embeddings, and the fused features are passed through a Bayesian linear classifier to output the final category predictions. On our self-built 50-class wildlife dataset, this approach outperforms conventional CNN and fixed-band DCT pipelines, achieving state-of-the-art accuracy under extreme sample scarcity.
MIAS-SAM: Medical Image Anomaly Segmentation without thresholding
Authors: Marco Colussi, Dragan Ahmetovic, Sergio Mascetti
Date: 2025-05-28 00:00:00
Tasks: Anomaly Segmentation, Decoder, Segmentation

This paper presents MIAS-SAM, a novel approach for the segmentation of anomalous regions in medical images. MIAS-SAM uses a patch-based memory bank to store relevant image features, which are extracted from normal data using the SAM encoder. At inference time, the embedding patches extracted from the SAM encoder are compared with those in the memory bank to obtain the anomaly map. Finally, MIAS-SAM computes the center of gravity of the anomaly map to prompt the SAM decoder, obtaining an accurate segmentation from the previously extracted features. Differently from prior works, MIAS-SAM does not require to define a threshold value to obtain the segmentation from the anomaly map. Experimental results conducted on three publicly available datasets, each with a different imaging modality (Brain MRI, Liver CT, and Retina OCT) show accurate anomaly segmentation capabilities measured using DICE score. The code is available at: https://github.com/warpcut/MIAS-SAM
Rhetorical Text-to-Image Generation via Two-layer Diffusion Policy Optimization
Authors: Yuxi Zhang, Yueting Li, Xinyu Du, Sibo Wang
Date: 2025-05-28 00:00:00
Tasks: Denoising, Image Generation, Text to Image Generation, Text-to-Image Generation

Generating images from rhetorical languages remains a critical challenge for text-to-image models. Even state-of-the-art (SOTA) multimodal large language models (MLLM) fail to generate images based on the hidden meaning inherent in rhetorical language--despite such content being readily mappable to visual representations by humans. A key limitation is that current models emphasize object-level word embedding alignment, causing metaphorical expressions to steer image generation towards their literal visuals and overlook the intended semantic meaning. To address this, we propose Rhet2Pix, a framework that formulates rhetorical text-to-image generation as a multi-step policy optimization problem, incorporating a two-layer MDP diffusion module. In the outer layer, Rhet2Pix converts the input prompt into incrementally elaborated sub-sentences and executes corresponding image-generation actions, constructing semantically richer visuals. In the inner layer, Rhet2Pix mitigates reward sparsity during image generation by discounting the final reward and optimizing every adjacent action pair along the diffusion denoising trajectory. Extensive experiments demonstrate the effectiveness of Rhet2Pix in rhetorical text-to-image generation. Our model outperforms SOTA MLLMs such as GPT-4o, Grok-3 and leading academic baselines across both qualitative and quantitative evaluations. The code and dataset used in this work are publicly available.
Cultural Evaluations of Vision-Language Models Have a Lot to Learn from Cultural Theory
Authors: Srishti Yadav, Lauren Tilton, Maria Antoniak, Taylor Arnold, Jiaang Li, Siddhesh Milind Pawar, Antonia Karamolegkou, Stella Frank, Zhaochong An, Negar Rostamzadeh, Daniel Hershcovich, Serge Belongie, Ekaterina Shutova
Date: 2025-05-28 00:00:00
Tasks: Diversity, Position

Modern vision-language models (VLMs) often fail at cultural competency evaluations and benchmarks. Given the diversity of applications built upon VLMs, there is renewed interest in understanding how they encode cultural nuances. While individual aspects of this problem have been studied, we still lack a comprehensive framework for systematically identifying and annotating the nuanced cultural dimensions present in images for VLMs. This position paper argues that foundational methodologies from visual culture studies (cultural studies, semiotics, and visual studies) are necessary for cultural analysis of images. Building upon this review, we propose a set of five frameworks, corresponding to cultural dimensions, that must be considered for a more complete analysis of the cultural competencies of VLMs.
VidText: Towards Comprehensive Evaluation for Video Text Understanding
Authors: Zhoufaran Yang, Yan Shu, Zhifei Yang, Yan Zhang, Yu Li, Keyang Lu, Gangyan Zeng, Shaohui Liu, Yu Zhou, Nicu Sebe
Date: 2025-05-28 00:00:00
Tasks: Multimodal Reasoning, Optical Character Recognition (OCR), Video Understanding

Visual texts embedded in videos carry rich semantic information, which is crucial for both holistic video understanding and fine-grained reasoning about local human actions. However, existing video understanding benchmarks largely overlook textual information, while OCR-specific benchmarks are constrained to static images, limiting their ability to capture the interaction between text and dynamic visual contexts. To address this gap, we propose VidText, a new benchmark designed for comprehensive and in-depth evaluation of video text understanding. VidText offers the following key features: 1) It covers a wide range of real-world scenarios and supports multilingual content, encompassing diverse settings where video text naturally appears. 2) It introduces a hierarchical evaluation framework with video-level, clip-level, and instance-level tasks, enabling assessment of both global summarization and local retrieval capabilities. 3) The benchmark also introduces a set of paired perception reasoning tasks, ranging from visual text perception to cross-modal reasoning between textual and visual information. Extensive experiments on 18 state-of-the-art Large Multimodal Models (LMMs) reveal that current models struggle across most tasks, with significant room for improvement. Further analysis highlights the impact of both model-intrinsic factors, such as input resolution and OCR capability, and external factors, including the use of auxiliary information and Chain-of-Thought reasoning strategies. We hope VidText will fill the current gap in video understanding benchmarks and serve as a foundation for future research on multimodal reasoning with video text in dynamic environments.
Improving Contrastive Learning for Referring Expression Counting
Authors: Kostas Triaridis, Panagiotis Kaliosis, E-Ro Nguyen, Jingyi Xu, Hieu Le, Dimitris Samaras
Date: 2025-05-28 00:00:00
Tasks: Contrastive Learning, Object Counting, Referring Expression

Object counting has progressed from class-specific models, which count only known categories, to class-agnostic models that generalize to unseen categories. The next challenge is Referring Expression Counting (REC), where the goal is to count objects based on fine-grained attributes and contextual differences. Existing methods struggle with distinguishing visually similar objects that belong to the same category but correspond to different referring expressions. To address this, we propose C-REX, a novel contrastive learning framework, based on supervised contrastive learning, designed to enhance discriminative representation learning. Unlike prior works, C-REX operates entirely within the image space, avoiding the misalignment issues of image-text contrastive learning, thus providing a more stable contrastive signal. It also guarantees a significantly larger pool of negative samples, leading to improved robustness in the learned representations. Moreover, we showcase that our framework is versatile and generic enough to be applied to other similar tasks like class-agnostic counting. To support our approach, we analyze the key components of sota detection-based models and identify that detecting object centroids instead of bounding boxes is the key common factor behind their success in counting tasks. We use this insight to design a simple yet effective detection-based baseline to build upon. Our experiments show that C-REX achieves state-of-the-art results in REC, outperforming previous methods by more than 22\% in MAE and more than 10\% in RMSE, while also demonstrating strong performance in class-agnostic counting. Code is available at https://github.com/cvlab-stonybrook/c-rex.