pwc-archive/papers-with-abstracts huggingface dataset:
PathGen-1.6M: 1.6 Million Pathology Image-text Pairs Generation through Multi-agent Collaboration
Authors: Yuxuan Sun, Yunlong Zhang, Yixuan Si, Chenglu Zhu, Zhongyi Shui, Kai Zhang, Jingxiong Li, Xingheng Lyu, Tao Lin, Lin Yang
Date: 2024-06-28 00:00:00
Tasks: image-classification, Image Classification, Zero-Shot Image Classification

Vision Language Models (VLMs) like CLIP have attracted substantial attention in pathology, serving as backbones for applications such as zero-shot image classification and Whole Slide Image (WSI) analysis. Additionally, they can function as vision encoders when combined with large language models (LLMs) to support broader capabilities. Current efforts to train pathology VLMs rely on pathology image-text pairs from platforms like PubMed, YouTube, and Twitter, which provide limited, unscalable data with generally suboptimal image quality. In this work, we leverage large-scale WSI datasets like TCGA to extract numerous high-quality image patches. We then train a large multimodal model to generate captions for these images, creating PathGen-1.6M, a dataset containing 1.6 million high-quality image-caption pairs. Our approach involves multiple agent models collaborating to extract representative WSI patches, generating and refining captions to obtain high-quality image-text pairs. Extensive experiments show that integrating these generated pairs with existing datasets to train a pathology-specific CLIP model, PathGen-CLIP, significantly enhances its ability to analyze pathological images, with substantial improvements across nine pathology-related zero-shot image classification tasks and three whole-slide image tasks. Furthermore, we construct 200K instruction-tuning data based on PathGen-1.6M and integrate PathGen-CLIP with the Vicuna LLM to create more powerful multimodal models through instruction tuning. Overall, we provide a scalable pathway for high-quality data generation in pathology, paving the way for next-generation general pathology models.
SMPLOlympics: Sports Environments for Physically Simulated Humanoids
Authors: Zhengyi Luo, Jiashun Wang, Kangni Liu, Haotian Zhang, Chen Tessler, Jingbo Wang, Ye Yuan, Jinkun Cao, Zihui Lin, Fengyi Wang, Jessica Hodgins, Kris Kitani
Date: 2024-06-28 00:00:00

We present SMPLOlympics, a collection of physically simulated environments that allow humanoids to compete in a variety of Olympic sports. Sports simulation offers a rich and standardized testing ground for evaluating and improving the capabilities of learning algorithms due to the diversity and physically demanding nature of athletic activities. As humans have been competing in these sports for many years, there is also a plethora of existing knowledge on the preferred strategy to achieve better performance. To leverage these existing human demonstrations from videos and motion capture, we design our humanoid to be compatible with the widely-used SMPL and SMPL-X human models from the vision and graphics community. We provide a suite of individual sports environments, including golf, javelin throw, high jump, long jump, and hurdling, as well as competitive sports, including both 1v1 and 2v2 games such as table tennis, tennis, fencing, boxing, soccer, and basketball. Our analysis shows that combining strong motion priors with simple rewards can result in human-like behavior in various sports. By providing a unified sports benchmark and baseline implementation of state and reward designs, we hope that SMPLOlympics can help the control and animation communities achieve human-like and performant behaviors.
DCSM 2.0: Deep Conditional Shape Models for Data Efficient Segmentation
Authors: Athira J Jacob, Puneet Sharma, Daniel Rueckert
Date: 2024-06-28 00:00:00
Tasks: Edge Detection

Segmentation is often the first step in many medical image analyses workflows. Deep learning approaches, while giving state-of-the-art accuracies, are data intensive and do not scale well to low data regimes. We introduce Deep Conditional Shape Models 2.0, which uses an edge detector, along with an implicit shape function conditioned on edge maps, to leverage cross-modality shape information. The shape function is trained exclusively on a source domain (contrasted CT) and applied to the target domain of interest (3D echocardiography). We demonstrate data efficiency in the target domain by varying the amounts of training data used in the edge detection stage. We observe that DCSM 2.0 outperforms the baseline at all data levels in terms of Hausdorff distances, and while using 50% or less of the training data in terms of average mesh distance, and at 10% or less of the data with the dice coefficient. The method scales well to low data regimes, with gains of up to 5% in dice coefficient, 2.58 mm in average surface distance and 21.02 mm in Hausdorff distance when using just 2% (22 volumes) of the training data.
The impact of model size on catastrophic forgetting in Online Continual Learning
Authors: Eunhae Lee
Date: 2024-06-28 00:00:00
Tasks: class-incremental learning, Class Incremental Learning, Continual Learning, Incremental Learning

This study investigates the impact of model size on Online Continual Learning performance, with a focus on catastrophic forgetting. Employing ResNet architectures of varying sizes, the research examines how network depth and width affect model performance in class-incremental learning using the SplitCIFAR-10 dataset. Key findings reveal that larger models do not guarantee better Continual Learning performance; in fact, they often struggle more in adapting to new tasks, particularly in online settings. These results challenge the notion that larger models inherently mitigate catastrophic forgetting, highlighting the nuanced relationship between model size and Continual Learning efficacy. This study contributes to a deeper understanding of model scalability and its practical implications in Continual Learning scenarios.
Localizing Anomalies via Multiscale Score Matching Analysis
Authors: Ahsan Mahmood, Junier Oliva, Martin Styner
Date: 2024-06-28 00:00:00
Tasks: Anomaly Detection, Anomaly Localization, Lesion Detection

Anomaly detection and localization in medical imaging remain critical challenges in healthcare. This paper introduces Spatial-MSMA (Multiscale Score Matching Analysis), a novel unsupervised method for anomaly localization in volumetric brain MRIs. Building upon the MSMA framework, our approach incorporates spatial information and conditional likelihoods to enhance anomaly detection capabilities. We employ a flexible normalizing flow model conditioned on patch positions and global image features to estimate patch-wise anomaly scores. The method is evaluated on a dataset of 1,650 T1- and T2-weighted brain MRIs from typically developing children, with simulated lesions added to the test set. Spatial-MSMA significantly outperforms existing methods, including reconstruction-based, generative-based, and interpretation-based approaches, in lesion detection and segmentation tasks. Our model achieves superior performance in both distance-based metrics (99th percentile Hausdorff Distance: $7.05 \pm 0.61$, Mean Surface Distance: $2.10 \pm 0.43$) and component-wise metrics (True Positive Rate: $0.83 \pm 0.01$, Positive Predictive Value: $0.96 \pm 0.01$). These results demonstrate Spatial-MSMA's potential for accurate and interpretable anomaly localization in medical imaging, with implications for improved diagnosis and treatment planning in clinical settings. Our code is available at~\url{https://github.com/ahsanMah/sade/}.
InfoNCE: Identifying the Gap Between Theory and Practice
Authors: Evgenia Rusak, Patrik Reizinger, Attila Juhos, Oliver Bringmann, Roland S. Zimmermann, Wieland Brendel
Date: 2024-06-28 00:00:00
Tasks: Contrastive Learning

Prior theory work on Contrastive Learning via the InfoNCE loss showed that, under certain assumptions, the learned representations recover the ground-truth latent factors. We argue that these theories overlook crucial aspects of how CL is deployed in practice. Specifically, they either assume equal variance across all latents or that certain latents are kept invariant. However, in practice, positive pairs are often generated using augmentations such as strong cropping to just a few pixels. Hence, a more realistic assumption is that all latent factors change with a continuum of variability across all factors. We introduce AnInfoNCE, a generalization of InfoNCE that can provably uncover the latent factors in this anisotropic setting, broadly generalizing previous identifiability results in CL. We validate our identifiability results in controlled experiments and show that AnInfoNCE increases the recovery of previously collapsed information in CIFAR10 and ImageNet, albeit at the cost of downstream accuracy. Finally, we discuss the remaining mismatches between theoretical assumptions and practical implementations.
Scalable Multi-Output Gaussian Processes with Stochastic Variational Inference
Authors: Xiaoyu Jiang, Sokratia Georgaka, Magnus Rattray, Mauricio A. Alvarez
Date: 2024-07-02 00:00:00
Tasks: Gaussian Processes, Variational Inference

The Multi-Output Gaussian Process is is a popular tool for modelling data from multiple sources. A typical choice to build a covariance function for a MOGP is the Linear Model of Coregionalization (LMC) which parametrically models the covariance between outputs. The Latent Variable MOGP (LV-MOGP) generalises this idea by modelling the covariance between outputs using a kernel applied to latent variables, one per output, leading to a flexible MOGP model that allows efficient generalization to new outputs with few data points. Computational complexity in LV-MOGP grows linearly with the number of outputs, which makes it unsuitable for problems with a large number of outputs. In this paper, we propose a stochastic variational inference approach for the LV-MOGP that allows mini-batches for both inputs and outputs, making computational complexity per training iteration independent of the number of outputs.
Decentralized Intelligence Network (DIN)
Authors: Abraham Nash
Date: 2024-07-02 00:00:00
Tasks: Federated Learning

Decentralized Intelligence Network (DIN) is a theoretical framework designed to address challenges in AI development, particularly focusing on data fragmentation and siloing issues. It facilitates effective AI training within sovereign data networks by overcoming barriers to accessing diverse data sources, leveraging: 1) personal data stores to ensure data sovereignty, where data remains securely within Participants' control; 2) a scalable federated learning protocol implemented on a public blockchain for decentralized AI training, where only model parameter updates are shared, keeping data within the personal data stores; and 3) a scalable, trustless cryptographic rewards mechanism on a public blockchain to incentivize participation and ensure fair reward distribution through a decentralized auditing protocol. This approach guarantees that no entity can prevent or control access to training data or influence financial benefits, as coordination and reward distribution are managed on the public blockchain with an immutable record. The framework supports effective AI training by allowing Participants to maintain control over their data, benefit financially, and contribute to a decentralized, scalable ecosystem that leverages collective AI to develop beneficial algorithms.
PLeaS -- Merging Models with Permutations and Least Squares
Authors: Anshul Nasery, Jonathan Hayase, Pang Wei Koh, Sewoong Oh
Date: 2024-07-02 00:00:00

The democratization of machine learning systems has made the process of fine-tuning accessible to a large number of practitioners, leading to a wide range of open-source models fine-tuned on specialized tasks and datasets. Recent work has proposed to merge such models to combine their functionalities. However, prior approaches are restricted to models that are fine-tuned from the same base model. Furthermore, the final merged model is typically restricted to be of the same size as the original models. In this work, we propose a new two-step algorithm to merge models-termed PLeaS-which relaxes these constraints. First, leveraging the Permutation symmetries inherent in the two models, PLeaS partially matches nodes in each layer by maximizing alignment. Next, PLeaS computes the weights of the merged model as a layer-wise Least Squares solution to minimize the approximation error between the features of the merged model and the permuted features of the original models. into a single model of a desired size, even when the two original models are fine-tuned from different base models. We also present a variant of our method which can merge models without using data from the fine-tuning domains. We demonstrate our method to merge ResNet models trained with shared and different label spaces, and show that we can perform better than the state-of-the-art merging methods by 8 to 15 percentage points for the same target compute while merging models trained on DomainNet and on fine-grained classification tasks.
Evaluating the Robustness of Adverse Drug Event Classification Models Using Templates
Authors: Dorothea MacPhail, David Harbecke, Lisa Raithel, Sebastian Möller
Date: 2024-07-02 00:00:00
Tasks: Negation

An adverse drug effect (ADE) is any harmful event resulting from medical drug treatment. Despite their importance, ADEs are often under-reported in official channels. Some research has therefore turned to detecting discussions of ADEs in social media. Impressive results have been achieved in various attempts to detect ADEs. In a high-stakes domain such as medicine, however, an in-depth evaluation of a model's abilities is crucial. We address the issue of thorough performance evaluation in English-language ADE detection with hand-crafted templates for four capabilities: Temporal order, negation, sentiment, and beneficial effect. We find that models with similar performance on held-out test sets have varying results on these capabilities.
A Pattern Language for Machine Learning Tasks
Authors: Benjamin Rodatz, Ian Fan, Tuomas Laakkonen, Neil John Ortega, Thomas Hoffmann, Vincent Wang-Mascianica
Date: 2024-07-02 00:00:00
Tasks: Attribute, Style Transfer

We formalise the essential data of objective functions as equality constraints on composites of learners. We call these constraints "tasks", and we investigate the idealised view that such tasks determine model behaviours. We develop a flowchart-like graphical mathematics for tasks that allows us to; (1) offer a unified perspective of approaches in machine learning across domains; (2) design and optimise desired behaviours model-agnostically; and (3) import insights from theoretical computer science into practical machine learning. As a proof-of-concept of the potential practical impact of our theoretical framework, we exhibit and implement a novel "manipulator" task that minimally edits input data to have a desired attribute. Our model-agnostic approach achieves this end-to-end, and without the need for custom architectures, adversarial training, random sampling, or interventions on the data, hence enabling capable, small-scale, and training-stable models.
On the Anatomy of Attention
Authors: Nikhil Khatri, Tuomas Laakkonen, Jonathon Liu, Vincent Wang-Maścianica
Date: 2024-07-02 00:00:00
Tasks: Anatomy

We introduce a category-theoretic diagrammatic formalism in order to systematically relate and reason about machine learning models. Our diagrams present architectures intuitively but without loss of essential detail, where natural relationships between models are captured by graphical transformations, and important differences and similarities can be identified at a glance. In this paper, we focus on attention mechanisms: translating folklore into mathematical derivations, and constructing a taxonomy of attention variants in the literature. As a first example of an empirical investigation underpinned by our formalism, we identify recurring anatomical components of attention, which we exhaustively recombine to explore a space of variations on the attention mechanism.
Quantum Curriculum Learning
Authors: Quoc Hoan Tran, Yasuhiro Endo, Hirotaka Oshima
Date: 2024-07-02 00:00:00
Tasks: Quantum Machine Learning

Quantum machine learning (QML) requires significant quantum resources to address practical real-world problems. When the underlying quantum information exhibits hierarchical structures in the data, limitations persist in training complexity and generalization. Research should prioritize both the efficient design of quantum architectures and the development of learning strategies to optimize resource usage. We propose a framework called quantum curriculum learning (Q-CurL) for quantum data, where the curriculum introduces simpler tasks or data to the learning model before progressing to more challenging ones. Q-CurL exhibits robustness to noise and data limitations, which is particularly relevant for current and near-term noisy intermediate-scale quantum devices. We achieve this through a curriculum design based on quantum data density ratios and a dynamic learning schedule that prioritizes the most informative quantum data. Empirical evidence shows that Q-CurL significantly enhances training convergence and generalization for unitary learning and improves the robustness of quantum phase recognition tasks. Q-CurL is effective with broad physical learning applications in condensed matter physics and quantum chemistry.
CEB: Compositional Evaluation Benchmark for Fairness in Large Language Models
Authors: Song Wang, Peng Wang, Tong Zhou, Yushun Dong, Zhen Tan, Jundong Li
Date: 2024-07-02 00:00:00
Tasks: Fairness

As Large Language Models (LLMs) are increasingly deployed to handle various natural language processing (NLP) tasks, concerns regarding the potential negative societal impacts of LLM-generated content have also arisen. To evaluate the biases exhibited by LLMs, researchers have recently proposed a variety of datasets. However, existing bias evaluation efforts often focus on only a particular type of bias and employ inconsistent evaluation metrics, leading to difficulties in comparison across different datasets and LLMs. To address these limitations, we collect a variety of datasets designed for the bias evaluation of LLMs, and further propose CEB, a Compositional Evaluation Benchmark that covers different types of bias across different social groups and tasks. The curation of CEB is based on our newly proposed compositional taxonomy, which characterizes each dataset from three dimensions: bias types, social groups, and tasks. By combining the three dimensions, we develop a comprehensive evaluation strategy for the bias in LLMs. Our experiments demonstrate that the levels of bias vary across these dimensions, thereby providing guidance for the development of specific bias mitigation methods.
Uncertainty-Aware Decarbonization for Datacenters
Authors: Amy Li, Sihang Liu, Yi Ding
Date: 2024-07-02 00:00:00
Tasks: Conformal Prediction, Scheduling, Uncertainty Quantification

This paper represents the first effort to quantify uncertainty in carbon intensity forecasting for datacenter decarbonization. We identify and analyze two types of uncertainty -- temporal and spatial -- and discuss their system implications. To address the temporal dynamics in quantifying uncertainty for carbon intensity forecasting, we introduce a conformal prediction-based framework. Evaluation results show that our technique robustly achieves target coverages in uncertainty quantification across various significance levels. We conduct two case studies using production power traces, focusing on temporal and spatial load shifting respectively. The results show that incorporating uncertainty into scheduling decisions can prevent a 5% and 14% increase in carbon emissions, respectively. These percentages translate to an absolute reduction of 2.1 and 10.4 tons of carbon emissions in a 20 MW datacenter cluster.
Two-Step Q-Learning
Authors: Antony Vijesh, Shreyas S R
Date: 2024-07-02 00:00:00
Tasks: Q-Learning

Q-learning is a stochastic approximation version of the classic value iteration. The literature has established that Q-learning suffers from both maximization bias and slower convergence. Recently, multi-step algorithms have shown practical advantages over existing methods. This paper proposes a novel off-policy two-step Q-learning algorithms, without importance sampling. With suitable assumption it was shown that, iterates in the proposed two-step Q-learning is bounded and converges almost surely to the optimal Q-values. This study also address the convergence analysis of the smooth version of two-step Q-learning, i.e., by replacing max function with the log-sum-exp function. The proposed algorithms are robust and easy to implement. Finally, we test the proposed algorithms on benchmark problems such as the roulette problem, maximization bias problem, and randomly generated Markov decision processes and compare it with the existing methods available in literature. Numerical experiments demonstrate the superior performance of both the two-step Q-learning and its smooth variants.
Agreement-Based Cascading for Efficient Inference
Authors: Steven Kolawole, Don Dennis, Ameet Talwalkar, Virginia Smith
Date: 2024-07-02 00:00:00

Adaptive inference schemes reduce the cost of machine learning inference by assigning smaller models to easier examples, attempting to avoid invocation of larger models when possible. In this work we explore a simple, effective adaptive inference technique we term Agreement-Based Cascading (ABC). ABC builds a cascade of models of increasing size/complexity, and uses agreement between ensembles of models at each level of the cascade as a basis for data-dependent routing. Although ensemble execution introduces additional expense, we show that these costs can be easily offset in practice due to large expected differences in model sizes, parallel inference execution capabilities, and accuracy benefits of ensembling. We examine ABC theoretically and empirically in terms of these parameters, showing that the approach can reliably act as a drop-in replacement for existing models and surpass the best single model it aims to replace in terms of both efficiency and accuracy. Additionally, we explore the performance of ABC relative to existing cascading methods in three common scenarios: (1) edge-to-cloud inference, where ABC reduces communication costs by up to 14x; (2) cloud-based model serving, where it achieves a 3x reduction in rental costs; and (3) inference via model API services, where ABC achieves a 2-25x reduction in average price per token/request relative to state-of-the-art LLM cascades.