pwc-archive/papers-with-abstracts huggingface dataset:
KU AIGEN ICL EDI@BC8 Track 3: Advancing Phenotype Named Entity Recognition and Normalization for Dysmorphology Physical Examination Reports
Authors: Hajung Kim, Chanhwi Kim, Jiwoong Sohn, Tim Beck, Marek Rei, Sunkyu Kim, T Ian Simpson, Joram M Posma, Antoine Lain, Mujeen Sung, Jaewoo Kang
Date: 2025-01-16 00:00:00
Tasks: Data Augmentation, named-entity-recognition, Named Entity Recognition

The objective of BioCreative8 Track 3 is to extract phenotypic key medical findings embedded within EHR texts and subsequently normalize these findings to their Human Phenotype Ontology (HPO) terms. However, the presence of diverse surface forms in phenotypic findings makes it challenging to accurately normalize them to the correct HPO terms. To address this challenge, we explored various models for named entity recognition and implemented data augmentation techniques such as synonym marginalization to enhance the normalization step. Our pipeline resulted in an exact extraction and normalization F1 score 2.6\% higher than the mean score of all submissions received in response to the challenge. Furthermore, in terms of the normalization F1 score, our approach surpassed the average performance by 1.9\%. These findings contribute to the advancement of automated medical data extraction and normalization techniques, showcasing potential pathways for future research and application in the biomedical domain.
Parallel multi-objective metaheuristics for smart communications in vehicular networks
Authors: Jamal Toutouh, Enrique Alba
Date: 2025-01-16 00:00:00
Tasks: Computational Efficiency

This article analyzes the use of two parallel multi-objective soft computing algorithms to automatically search for high-quality settings of the Ad hoc On Demand Vector routing protocol for vehicular networks. These methods are based on an evolutionary algorithm and on a swarm intelligence approach. The experimental analysis demonstrates that the configurations computed by our optimization algorithms outperform other state-of-the-art optimized ones. In turn, the computational efficiency achieved by all the parallel versions is greater than 87 %. Therefore, the line of work presented in this article represents an efficient framework to improve vehicular communications.
A Simple Aerial Detection Baseline of Multimodal Language Models
Authors: Qingyun Li, Yushi Chen, Xinya Shu, Dong Chen, Xin He, Yi Yu, Xue Yang
Date: 2025-01-16 00:00:00
Tasks: object-detection, Object Detection, Question Answering, Visual Grounding, Visual Question Answering

The multimodal language models (MLMs) based on generative pre-trained Transformer are considered powerful candidates for unifying various domains and tasks. MLMs developed for remote sensing (RS) have demonstrated outstanding performance in multiple tasks, such as visual question answering and visual grounding. In addition to visual grounding that detects specific objects corresponded to given instruction, aerial detection, which detects all objects of multiple categories, is also a valuable and challenging task for RS foundation models. However, aerial detection has not been explored by existing RS MLMs because the autoregressive prediction mechanism of MLMs differs significantly from the detection outputs. In this paper, we present a simple baseline for applying MLMs to aerial detection for the first time, named LMMRotate. Specifically, we first introduce a normalization method to transform detection outputs into textual outputs to be compatible with the MLM framework. Then, we propose a evaluation method, which ensures a fair comparison between MLMs and conventional object detection models. We construct the baseline by fine-tuning open-source general-purpose MLMs and achieve impressive detection performance comparable to conventional detector. We hope that this baseline will serve as a reference for future MLM development, enabling more comprehensive capabilities for understanding RS images. Code is available at https://github.com/Li-Qingyun/mllm-mmrotate.
CyberMentor: AI Powered Learning Tool Platform to Address Diverse Student Needs in Cybersecurity Education
Authors: Tianyu Wang, Nianjun Zhou, Zhixiong Chen
Date: 2025-01-16 00:00:00
Tasks: Information Retrieval, RAG, Retrieval, Retrieval-augmented Generation

Many non-traditional students in cybersecurity programs often lack access to advice from peers, family members and professors, which can hinder their educational experiences. Additionally, these students may not fully benefit from various LLM-powered AI assistants due to issues like content relevance, locality of advice, minimum expertise, and timing. This paper addresses these challenges by introducing an application designed to provide comprehensive support by answering questions related to knowledge, skills, and career preparation advice tailored to the needs of these students. We developed a learning tool platform, CyberMentor, to address the diverse needs and pain points of students majoring in cybersecurity. Powered by agentic workflow and Generative Large Language Models (LLMs), the platform leverages Retrieval-Augmented Generation (RAG) for accurate and contextually relevant information retrieval to achieve accessibility and personalization. We demonstrated its value in addressing knowledge requirements for cybersecurity education and for career marketability, in tackling skill requirements for analytical and programming assignments, and in delivering real time on demand learning support. Using three use scenarios, we showcased CyberMentor in facilitating knowledge acquisition and career preparation and providing seamless skill-based guidance and support. We also employed the LangChain prompt-based evaluation methodology to evaluate the platform's impact, confirming its strong performance in helpfulness, correctness, and completeness. These results underscore the system's ability to support students in developing practical cybersecurity skills while improving equity and sustainability within higher education. Furthermore, CyberMentor's open-source design allows for adaptation across other disciplines, fostering educational innovation and broadening its potential impact.
The Goofus & Gallant Story Corpus for Practical Value Alignment
Authors: Md Sultan Al Nahian, Tasmia Tasrin, Spencer Frazier, Mark Riedl, Brent Harrison
Date: 2025-01-16 00:00:00

Values or principles are key elements of human society that influence people to behave and function according to an accepted standard set of social rules to maintain social order. As AI systems are becoming ubiquitous in human society, it is a major concern that they could violate these norms or values and potentially cause harm. Thus, to prevent intentional or unintentional harm, AI systems are expected to take actions that align with these principles. Training systems to exhibit this type of behavior is difficult and often requires a specialized dataset. This work presents a multi-modal dataset illustrating normative and non-normative behavior in real-life situations described through natural language and artistic images. This training set contains curated sets of images that are designed to teach young children about social principles. We argue that this is an ideal dataset to use for training socially normative agents given this fact.
Practical Continual Forgetting for Pre-trained Vision Models
Authors: Hongbo Zhao, Fei Zhu, Bolin Ni, Feng Zhu, Gaofeng Meng, Zhaoxiang Zhang
Date: 2025-01-16 00:00:00
Tasks: Continual Forgetting, Face Recognition, image-classification, Image Classification, Object Detection

For privacy and security concerns, the need to erase unwanted information from pre-trained vision models is becoming evident nowadays. In real-world scenarios, erasure requests originate at any time from both users and model owners, and these requests usually form a sequence. Therefore, under such a setting, selective information is expected to be continuously removed from a pre-trained model while maintaining the rest. We define this problem as continual forgetting and identify three key challenges. (i) For unwanted knowledge, efficient and effective deleting is crucial. (ii) For remaining knowledge, the impact brought by the forgetting procedure should be minimal. (iii) In real-world scenarios, the training samples may be scarce or partially missing during the process of forgetting. To address them, we first propose Group Sparse LoRA (GS-LoRA). Specifically, towards (i), we introduce LoRA modules to fine-tune the FFN layers in Transformer blocks for each forgetting task independently, and towards (ii), a simple group sparse regularization is adopted, enabling automatic selection of specific LoRA groups and zeroing out the others. To further extend GS-LoRA to more practical scenarios, we incorporate prototype information as additional supervision and introduce a more practical approach, GS-LoRA++. For each forgotten class, we move the logits away from its original prototype. For the remaining classes, we pull the logits closer to their respective prototypes. We conduct extensive experiments on face recognition, object detection and image classification and demonstrate that our method manages to forget specific classes with minimal impact on other classes. Codes have been released on https://github.com/bjzhb666/GS-LoRA.
Cueless EEG imagined speech for subject identification: dataset and benchmarks
Authors: Ali Derakhshesh, Zahra Dehghanian, Reza Ebrahimpour, Hamid R. Rabiee
Date: 2025-01-16 00:00:00
Tasks: EEG, Electroencephalogram (EEG)

Electroencephalogram (EEG) signals have emerged as a promising modality for biometric identification. While previous studies have explored the use of imagined speech with semantically meaningful words for subject identification, most have relied on additional visual or auditory cues. In this study, we introduce a cueless EEG-based imagined speech paradigm, where subjects imagine the pronunciation of semantically meaningful words without any external cues. This innovative approach addresses the limitations of prior methods by requiring subjects to select and imagine words from a predefined list naturally. The dataset comprises over 4,350 trials from 11 subjects across five sessions. We assess a variety of classification methods, including traditional machine learning techniques such as Support Vector Machines (SVM) and XGBoost, as well as time-series foundation models and deep learning architectures specifically designed for EEG classification, such as EEG Conformer and Shallow ConvNet. A session-based hold-out validation strategy was employed to ensure reliable evaluation and prevent data leakage. Our results demonstrate outstanding classification accuracy, reaching 97.93%. These findings highlight the potential of cueless EEG paradigms for secure and reliable subject identification in real-world applications, such as brain-computer interfaces (BCIs).
Towards Large Reasoning Models: A Survey of Reinforced Reasoning with Large Language Models
Authors: Fengli Xu, Qianyue Hao, Zefang Zong, Jingwei Wang, Yunke Zhang, Jingyi Wang, Xiaochong Lan, Jiahui Gong, Tianjian Ouyang, Fanjin Meng, Chenyang Shao, Yuwei Yan, Qinglong Yang, Yiwen Song, Sijian Ren, Xinyuan Hu, Yu Li, Jie Feng, Chen Gao, Yong Li
Date: 2025-01-16 00:00:00
Tasks: Reinforcement Learning (RL)

Language has long been conceived as an essential tool for human reasoning. The breakthrough of Large Language Models (LLMs) has sparked significant research interest in leveraging these models to tackle complex reasoning tasks. Researchers have moved beyond simple autoregressive token generation by introducing the concept of "thought" -- a sequence of tokens representing intermediate steps in the reasoning process. This innovative paradigm enables LLMs' to mimic complex human reasoning processes, such as tree search and reflective thinking. Recently, an emerging trend of learning to reason has applied reinforcement learning (RL) to train LLMs to master reasoning processes. This approach enables the automatic generation of high-quality reasoning trajectories through trial-and-error search algorithms, significantly expanding LLMs' reasoning capacity by providing substantially more training data. Furthermore, recent studies demonstrate that encouraging LLMs to "think" with more tokens during test-time inference can further significantly boost reasoning accuracy. Therefore, the train-time and test-time scaling combined to show a new research frontier -- a path toward Large Reasoning Model. The introduction of OpenAI's o1 series marks a significant milestone in this research direction. In this survey, we present a comprehensive review of recent progress in LLM reasoning. We begin by introducing the foundational background of LLMs and then explore the key technical components driving the development of large reasoning models, with a focus on automated data construction, learning-to-reason techniques, and test-time scaling. We also analyze popular open-source projects at building large reasoning models, and conclude with open challenges and future research directions.
Inference-Time Alignment in Diffusion Models with Reward-Guided Generation: Tutorial and Review
Authors: Masatoshi Uehara, Yulai Zhao, Chenyu Wang, Xiner Li, Aviv Regev, Sergey Levine, Tommaso Biancalani
Date: 2025-01-16 00:00:00
Tasks: Denoising, Protein Design

This tutorial provides an in-depth guide on inference-time guidance and alignment methods for optimizing downstream reward functions in diffusion models. While diffusion models are renowned for their generative modeling capabilities, practical applications in fields such as biology often require sample generation that maximizes specific metrics (e.g., stability, affinity in proteins, closeness to target structures). In these scenarios, diffusion models can be adapted not only to generate realistic samples but also to explicitly maximize desired measures at inference time without fine-tuning. This tutorial explores the foundational aspects of such inference-time algorithms. We review these methods from a unified perspective, demonstrating that current techniques -- such as Sequential Monte Carlo (SMC)-based guidance, value-based sampling, and classifier guidance -- aim to approximate soft optimal denoising processes (a.k.a. policies in RL) that combine pre-trained denoising processes with value functions serving as look-ahead functions that predict from intermediate states to terminal rewards. Within this framework, we present several novel algorithms not yet covered in the literature. Furthermore, we discuss (1) fine-tuning methods combined with inference-time techniques, (2) inference-time algorithms based on search algorithms such as Monte Carlo tree search, which have received limited attention in current research, and (3) connections between inference-time algorithms in language models and diffusion models. The code of this tutorial on protein design is available at https://github.com/masa-ue/AlignInversePro
Incorporating Quantum Advantage in Quantum Circuit Generation through Genetic Programming
Authors: Christoph Stein, Michael Färber
Date: 2025-01-16 00:00:00
Tasks: Quantum Circuit Generation

Designing efficient quantum circuits that leverage quantum advantage compared to classical computing has become increasingly critical. Genetic algorithms have shown potential in generating such circuits through artificial evolution. However, integrating quantum advantage into the fitness function of these algorithms remains unexplored. In this paper, we aim to enhance the efficiency of quantum circuit design by proposing two novel approaches for incorporating quantum advantage metrics into the fitness function of genetic algorithms.1 We evaluate our approaches based on the Bernstein-Vazirani Problem and the Unstructured Database Search Problem as test cases. The results demonstrate that our approaches not only improve the convergence speed of the genetic algorithm but also produce circuits comparable to expert-designed solutions. Our findings suggest that automated quantum circuit design using genetic algorithms that incorporate a measure of quantum advantage is a promising approach to accelerating the development of quantum algorithms.
Authenticated Delegation and Authorized AI Agents
Authors: Tobin South, Samuele Marro, Thomas Hardjono, Robert Mahari, Cedric Deslandes Whitney, Dazza Greenwood, Alan Chan, Alex Pentland
Date: 2025-01-16 00:00:00
Tasks: AI Agent

The rapid deployment of autonomous AI agents creates urgent challenges around authorization, accountability, and access control in digital spaces. New standards are needed to know whom AI agents act on behalf of and guide their use appropriately, protecting online spaces while unlocking the value of task delegation to autonomous agents. We introduce a novel framework for authenticated, authorized, and auditable delegation of authority to AI agents, where human users can securely delegate and restrict the permissions and scope of agents while maintaining clear chains of accountability. This framework builds on existing identification and access management protocols, extending OAuth 2.0 and OpenID Connect with agent-specific credentials and metadata, maintaining compatibility with established authentication and web infrastructure. Further, we propose a framework for translating flexible, natural language permissions into auditable access control configurations, enabling robust scoping of AI agent capabilities across diverse interaction modalities. Taken together, this practical approach facilitates immediate deployment of AI agents while addressing key security and accountability concerns, working toward ensuring agentic AI systems perform only appropriate actions and providing a tool for digital service providers to enable AI agent interactions without risking harm from scalable interaction.
Robin: a Suite of Multi-Scale Vision-Language Models and the CHIRP Evaluation Benchmark
Authors: Alexis Roger, Prateek Humane, Daniel Z. Kaplan, Kshitij Gupta, Qi Sun, George Adamopoulos, Jonathan Siu Chi Lim, Quentin Anthony, Edwin Fennell, Irina Rish
Date: 2025-01-16 00:00:00

The proliferation of Vision-Language Models (VLMs) in the past several years calls for rigorous and comprehensive evaluation methods and benchmarks. This work analyzes existing VLM evaluation techniques, including automated metrics, AI-based assessments, and human evaluations across diverse tasks. We first introduce Robin - a novel suite of VLMs that we built by combining Large Language Models (LLMs) and Vision Encoders (VEs) at multiple scales, and use Robin to identify shortcomings of current evaluation approaches across scales. Next, to overcome the identified limitations, we introduce CHIRP - a new long form response benchmark we developed for more robust and complete VLM evaluation. We provide open access to the Robin training code, model suite, and CHIRP benchmark to promote reproducibility and advance VLM research.
The Heap: A Contamination-Free Multilingual Code Dataset for Evaluating Large Language Models
Authors: Jonathan Katzy, Razvan Mihai Popescu, Arie van Deursen, Maliheh Izadi
Date: 2025-01-16 00:00:00

The recent rise in the popularity of large language models has spurred the development of extensive code datasets needed to train them. This has left limited code available for collection and use in the downstream investigation of specific behaviors, or evaluation of large language models without suffering from data contamination. To address this problem, we release The Heap, a large multilingual dataset covering 57 programming languages that has been deduplicated with respect to other open datasets of code, enabling researchers to conduct fair evaluations of large language models without significant data cleaning overhead.
Monte Carlo Tree Search with Velocity Obstacles for safe and efficient motion planning in dynamic environments
Authors: Lorenzo Bonanni, Daniele Meli, Alberto Castellini, Alessandro Farinelli
Date: 2025-01-16 00:00:00
Tasks: Model Predictive Control, Motion Planning

Online motion planning is a challenging problem for intelligent robots moving in dense environments with dynamic obstacles, e.g., crowds. In this work, we propose a novel approach for optimal and safe online motion planning with minimal information about dynamic obstacles. Specifically, our approach requires only the current position of the obstacles and their maximum speed, but it does not need any information about their exact trajectories or dynamic model. The proposed methodology combines Monte Carlo Tree Search (MCTS), for online optimal planning via model simulations, with Velocity Obstacles (VO), for obstacle avoidance. We perform experiments in a cluttered simulated environment with walls, and up to 40 dynamic obstacles moving with random velocities and directions. With an ablation study, we show the key contribution of VO in scaling up the efficiency of MCTS, selecting the safest and most rewarding actions in the tree of simulations. Moreover, we show the superiority of our methodology with respect to state-of-the-art planners, including Non-linear Model Predictive Control (NMPC), in terms of improved collision rate, computational and task performance.
NS-Gym: Open-Source Simulation Environments and Benchmarks for Non-Stationary Markov Decision Processes
Authors: Nathaniel S. Keplinger, Baiting Luo, Iliyas Bektas, Yunuo Zhang, Kyle Hollins Wray, Aron Laszka, Abhishek Dubey, Ayan Mukhopadhyay
Date: 2025-01-16 00:00:00
Tasks: Decision Making

In many real-world applications, agents must make sequential decisions in environments where conditions are subject to change due to various exogenous factors. These non-stationary environments pose significant challenges to traditional decision-making models, which typically assume stationary dynamics. Non-stationary Markov decision processes (NS-MDPs) offer a framework to model and solve decision problems under such changing conditions. However, the lack of standardized benchmarks and simulation tools has hindered systematic evaluation and advance in this field. We present NS-Gym, the first simulation toolkit designed explicitly for NS-MDPs, integrated within the popular Gymnasium framework. In NS-Gym, we segregate the evolution of the environmental parameters that characterize non-stationarity from the agent's decision-making module, allowing for modular and flexible adaptations to dynamic environments. We review prior work in this domain and present a toolkit encapsulating key problem characteristics and types in NS-MDPs. This toolkit is the first effort to develop a set of standardized interfaces and benchmark problems to enable consistent and reproducible evaluation of algorithms under non-stationary conditions. We also benchmark six algorithmic approaches from prior work on NS-MDPs using NS-Gym. Our vision is that NS-Gym will enable researchers to assess the adaptability and robustness of their decision-making algorithms to non-stationary conditions.