pwc-archive/papers-with-abstracts huggingface dataset:
A Deep Bayesian Bandits Approach for Anticancer Therapy: Exploration via Functional Prior
Authors: Mingyu Lu, Yifang Chen, Su-In Lee
Date: 2022-05-05 00:00:00
Tasks: BIG-bench Machine Learning, Drug Response Prediction

Learning personalized cancer treatment with machine learning holds great promise to improve cancer patients' chance of survival. Despite recent advances in machine learning and precision oncology, this approach remains challenging as collecting data in preclinical/clinical studies for modeling multiple treatment efficacies is often an expensive, time-consuming process. Moreover, the randomization in treatment allocation proves to be suboptimal since some participants/samples are not receiving the most appropriate treatments during the trial. To address this challenge, we formulate drug screening study as a "contextual bandit" problem, in which an algorithm selects anticancer therapeutics based on contextual information about cancer cell lines while adapting its treatment strategy to maximize treatment response in an "online" fashion. We propose using a novel deep Bayesian bandits framework that uses functional prior to approximate posterior for drug response prediction based on multi-modal information consisting of genomic features and drug structure. We empirically evaluate our method on three large-scale in vitro pharmacogenomic datasets and show that our approach outperforms several benchmarks in identifying optimal treatment for a given cell line.
GANs as Gradient Flows that Converge
Authors: Yu-Jui Huang, Yuchong Zhang
Date: 2022-05-05 00:00:00

This paper approaches the unsupervised learning problem by gradient descent in the space of probability density functions. A main result shows that along the gradient flow induced by a distribution-dependent ordinary differential equation (ODE), the unknown data distribution emerges as the long-time limit. That is, one can uncover the data distribution by simulating the distribution-dependent ODE. Intriguingly, the simulation of the ODE is shown equivalent to the training of generative adversarial networks (GANs). This equivalence provides a new "cooperative" view of GANs and, more importantly, sheds new light on the divergence of GANs. In particular, it reveals that the GAN algorithm implicitly minimizes the mean squared error (MSE) between two sets of samples, and this MSE fitting alone can cause GANs to diverge. To construct a solution to the distribution-dependent ODE, we first show that the associated nonlinear Fokker-Planck equation has a unique weak solution, by the Crandall-Liggett theorem for differential equations in Banach spaces. Based on this solution to the Fokker-Planck equation, we construct a unique solution to the ODE, using Trevisan's superposition principle. The convergence of the induced gradient flow to the data distribution is obtained by analyzing the Fokker-Planck equation.
GreenDB: Toward a Product-by-Product Sustainability Database
Authors: Sebastian Jäger, Jessica Greene, Max Jakob, Ruben Korenke, Tilman Santarius, Felix Biessmann
Date: 2022-05-05 00:00:00
Tasks: Recommendation Systems

The production, shipping, usage, and disposal of consumer goods have a substantial impact on greenhouse gas emissions and the depletion of resources. Modern retail platforms rely heavily on Machine Learning (ML) for their search and recommender systems. Thus, ML can potentially support efforts towards more sustainable consumption patterns, for example, by accounting for sustainability aspects in product search or recommendations. However, leveraging ML potential for reaching sustainability goals requires data on sustainability. Unfortunately, no open and publicly available database integrates sustainability information on a product-by-product basis. In this work, we present the GreenDB, which fills this gap. Based on search logs of millions of users, we prioritize which products users care about most. The GreenDB schema extends the well-known schema.org Product definition and can be readily integrated into existing product catalogs to improve sustainability information available for search and recommendation experiences. We present our proof of concept implementation of a scraping system that creates the GreenDB dataset.
Adversarial confound regression and uncertainty measurements to classify heterogeneous clinical MRI in Mass General Brigham
Authors: Matthew Leming, Sudeshna Das, Hyungsoon Im
Date: 2022-05-05 00:00:00
Tasks: Deep Learning, Diagnostic, regression, Uncertainty Quantification

Automated disease detection in neuroimaging holds promise to improve the diagnostic ability of radiologists, but routinely collected clinical data frequently contains technical and demographic confounding factors that cause data to both differ between sites and be systematically associated with the disease of interest, thus negatively affecting the robustness of diagnostic models. There is a critical need for diagnostic deep learning models that can train on such imbalanced datasets without being influenced by these confounds. In this work, we introduce a novel deep learning architecture, MUCRAN (Multi-Confound Regression Adversarial Network), to train a deep learning model on clinical brain MRI while regressing demographic and technical confounding factors. We trained MUCRAN using 17,076 clinical T1 Axial brain MRIs collected from Massachusetts General Hospital before 2019 and demonstrated that MUCRAN could successfully regress major confounding factors in the vast clinical data. We also applied a method for quantifying uncertainty across an ensemble of these models to automatically exclude out-of-distribution data in the AD detection. By combining MUCRAN and the uncertainty quantification method, we showed consistent and significant increases in the AD detection accuracy for newly collected MGH data (post-2019) and for data from other hospitals. MUCRAN offers a generalizable approach for heterogenous clinical data for deep-learning-based automatic disease detection.
Exploiting Ligand Additivity for Transferable Machine Learning of Multireference Character Across Known Transition Metal Complex Ligands
Authors: Chenru Duan, Adriana J. Ladera, Julian C. -L. Liu, Michael G. Taylor, Isuru R. Ariyarathna, Heather J. Kulik
Date: 2022-05-05 00:00:00

Accurate virtual high-throughput screening (VHTS) of transition metal complexes (TMCs) remains challenging due to the possibility of high multi-reference (MR) character that complicates property evaluation. We compute MR diagnostics for over 5,000 ligands present in previously synthesized transition metal complexes in the Cambridge Structural Database (CSD). To accomplish this task, we introduce an iterative approach for consistent ligand charge assignment for ligands in the CSD. Across this set, we observe that MR character correlates linearly with the inverse value of the averaged bond order over all bonds in the molecule. We then demonstrate that ligand additivity of MR character holds in TMCs, which suggests that the TMC MR character can be inferred from the sum of the MR character of the ligands. Encouraged by this observation, we leverage ligand additivity and develop a ligand-derived machine learning representation to train neural networks to predict the MR character of TMCs from properties of the constituent ligands. This approach yields models with excellent performance and superior transferability to unseen ligand chemistry and compositions.
A Data Cartography based MixUp for Pre-trained Language Models
Authors: Seo Yeon Park, Cornelia Caragea
Date: 2022-05-06 00:00:00
Proceeding: NAACL 2022 7
Tasks: Data Augmentation, Language Modeling, Language Modelling

MixUp is a data augmentation strategy where additional samples are generated during training by combining random pairs of training samples and their labels. However, selecting random pairs is not potentially an optimal choice. In this work, we propose TDMixUp, a novel MixUp strategy that leverages Training Dynamics and allows more informative samples to be combined for generating new data samples. Our proposed TDMixUp first measures confidence, variability, (Swayamdipta et al., 2020), and Area Under the Margin (AUM) (Pleiss et al., 2020) to identify the characteristics of training samples (e.g., as easy-to-learn or ambiguous samples), and then interpolates these characterized samples. We empirically validate that our method not only achieves competitive performance using a smaller subset of the training data compared with strong baselines, but also yields lower expected calibration error on the pre-trained language model, BERT, on both in-domain and out-of-domain settings in a wide range of NLP tasks. We publicly release our code.
The Unreliability of Explanations in Few-shot Prompting for Textual Reasoning
Authors: Xi Ye, Greg Durrett
Date: 2022-05-06 00:00:00
Tasks: In-Context Learning, Language Modelling, Large Language Model, Natural Language Inference, Question Answering

Does prompting a large language model (LLM) like GPT-3 with explanations improve in-context learning? We study this question on two NLP tasks that involve reasoning over text, namely question answering and natural language inference. We test the performance of four LLMs on three textual reasoning datasets using prompts that include explanations in multiple different styles. For these tasks, we find that including explanations in the prompts for OPT, GPT-3 (davinci), and InstructGPT (text-davinci-001) only yields small to moderate accuracy improvements over standard few-show learning. However, text-davinci-002 is able to benefit more substantially. We further show that explanations generated by the LLMs may not entail the models' predictions nor be factually grounded in the input, even on simple tasks with extractive explanations. However, these flawed explanations can still be useful as a way to verify LLMs' predictions post-hoc. Through analysis in our three settings, we show that explanations judged by humans to be good--logically consistent with the input and the prediction--more likely cooccur with accurate predictions. Following these observations, we train calibrators using automatically extracted scores that assess the reliability of explanations, allowing us to improve performance post-hoc across all of our datasets.
Example-Based Machine Translation from Text to a Hierarchical Representation of Sign Language
Authors: Élise Bertin-Lemée, Annelies Braffort, Camille Challant, Claire Danet, Michael Filhol
Date: 2022-05-06 00:00:00
Tasks: Machine Translation, Translation

This article presents an original method for Text-to-Sign Translation. It compensates data scarcity using a domain-specific parallel corpus of alignments between text and hierarchical formal descriptions of Sign Language videos in AZee. Based on the detection of similarities present in the source text, the proposed algorithm recursively exploits matches and substitutions of aligned segments to build multiple candidate translations for a novel statement. This helps preserving Sign Language structures as much as possible before falling back on literal translations too quickly, in a generative way. The resulting translations are in the form of AZee expressions, designed to be used as input to avatar synthesis systems. We present a test set tailored to showcase its potential for expressiveness and generation of idiomatic target language, and observed limitations. This work finally opens prospects on how to evaluate translation and linguistic aspects, such as accuracy and grammatical fluency.
Combining Humor and Sarcasm for Improving Political Parody Detection
Authors: Xiao Ao, Danae Sánchez Villegas, Daniel Preoţiuc-Pietro, Nikolaos Aletras
Date: 2022-05-06 00:00:00
Proceeding: NAACL 2022 7

Parody is a figurative device used for mimicking entities for comedic or critical purposes. Parody is intentionally humorous and often involves sarcasm. This paper explores jointly modelling these figurative tropes with the goal of improving performance of political parody detection in tweets. To this end, we present a multi-encoder model that combines three parallel encoders to enrich parody-specific representations with humor and sarcasm information. Experiments on a publicly available data set of political parody tweets demonstrate that our approach outperforms previous state-of-the-art methods.
Necessity and Sufficiency for Explaining Text Classifiers: A Case Study in Hate Speech Detection
Authors: Esma Balkir, Isar Nejadgholi, Kathleen C. Fraser, Svetlana Kiritchenko
Date: 2022-05-06 00:00:00
Proceeding: NAACL 2022 7
Tasks: Hate Speech Detection

We present a novel feature attribution method for explaining text classifiers, and analyze it in the context of hate speech detection. Although feature attribution models usually provide a single importance score for each token, we instead provide two complementary and theoretically-grounded scores -- necessity and sufficiency -- resulting in more informative explanations. We propose a transparent method that calculates these values by generating explicit perturbations of the input text, allowing the importance scores themselves to be explainable. We employ our method to explain the predictions of different hate speech detection models on the same set of curated examples from a test suite, and show that different values of necessity and sufficiency for identity terms correspond to different kinds of false positive errors, exposing sources of classifier bias against marginalized groups.
Disentangled Learning of Stance and Aspect Topics for Vaccine Attitude Detection in Social Media
Authors: Lixing Zhu, Zheng Fang, Gabriele Pergola, Rob Procter, Yulan He
Date: 2022-05-06 00:00:00
Proceeding: NAACL 2022 7
Tasks: Aspect-Based Sentiment Analysis, Aspect-Based Sentiment Analysis (ABSA), Sentiment Analysis, Stance Detection

Building models to detect vaccine attitudes on social media is challenging because of the composite, often intricate aspects involved, and the limited availability of annotated data. Existing approaches have relied heavily on supervised training that requires abundant annotations and pre-defined aspect categories. Instead, with the aim of leveraging the large amount of unannotated data now available on vaccination, we propose a novel semi-supervised approach for vaccine attitude detection, called VADet. A variational autoencoding architecture based on language models is employed to learn from unlabelled data the topical information of the domain. Then, the model is fine-tuned with a few manually annotated examples of user attitudes. We validate the effectiveness of VADet on our annotated data and also on an existing vaccination corpus annotated with opinions on vaccines. Our results show that VADet is able to learn disentangled stance and aspect topics, and outperforms existing aspect-based sentiment analysis models on both stance detection and tweet clustering.
GlobEnc: Quantifying Global Token Attribution by Incorporating the Whole Encoder Layer in Transformers
Authors: Ali Modarressi, Mohsen Fayyaz, Yadollah Yaghoobzadeh, Mohammad Taher Pilehvar
Date: 2022-05-06 00:00:00
Proceeding: NAACL 2022 7

There has been a growing interest in interpreting the underlying dynamics of Transformers. While self-attention patterns were initially deemed as the primary option, recent studies have shown that integrating other components can yield more accurate explanations. This paper introduces a novel token attribution analysis method that incorporates all the components in the encoder block and aggregates this throughout layers. Through extensive quantitative and qualitative experiments, we demonstrate that our method can produce faithful and meaningful global token attributions. Our experiments reveal that incorporating almost every encoder component results in increasingly more accurate analysis in both local (single layer) and global (the whole model) settings. Our global attribution analysis significantly outperforms previous methods on various tasks regarding correlation with gradient-based saliency scores. Our code is freely available at https://github.com/mohsenfayyaz/GlobEnc.
Bridging the Domain Gap for Stance Detection for the Zulu language
Authors: Gcinizwe Dlamini, Imad Eddine Ibrahim Bekkouch, Adil Khan, Leon Derczynski
Date: 2022-05-06 00:00:00
Tasks: Domain Adaptation, Machine Translation, Misinformation, Stance Detection

Misinformation has become a major concern in recent last years given its spread across our information sources. In the past years, many NLP tasks have been introduced in this area, with some systems reaching good results on English language datasets. Existing AI based approaches for fighting misinformation in literature suggest automatic stance detection as an integral first step to success. Our paper aims at utilizing this progress made for English to transfers that knowledge into other languages, which is a non-trivial task due to the domain gap between English and the target languages. We propose a black-box non-intrusive method that utilizes techniques from Domain Adaptation to reduce the domain gap, without requiring any human expertise in the target language, by leveraging low-quality data in both a supervised and unsupervised manner. This allows us to rapidly achieve similar results for stance detection for the Zulu language, the target language in this work, as are found for English. We also provide a stance detection dataset in the Zulu language. Our experimental results show that by leveraging English datasets and machine translation we can increase performances on both English data along with other languages.
Characterizing Multi-Domain False News and Underlying User Effects on Chinese Weibo
Authors: Qiang Sheng, Juan Cao, H. Russell Bernard, Kai Shu, Jintao Li, Huan Liu
Date: 2022-05-06 00:00:00

False news that spreads on social media has proliferated over the past years and has led to multi-aspect threats in the real world. While there are studies of false news on specific domains (like politics or health care), little work is found comparing false news across domains. In this article, we investigate false news across nine domains on Weibo, the largest Twitter-like social media platform in China, from 2009 to 2019. The newly collected data comprise 44,728 posts in the nine domains, published by 40,215 users, and reposted over 3.4 million times. Based on the distributions and spreads of the multi-domain dataset, we observe that false news in domains that are close to daily life like health and medicine generated more posts but diffused less effectively than those in other domains like politics, and that political false news had the most effective capacity for diffusion. The widely diffused false news posts on Weibo were associated strongly with certain types of users -- by gender, age, etc. Further, these posts provoked strong emotions in the reposts and diffused further with the active engagement of false-news starters. Our findings have the potential to help design false news detection systems in suspicious news discovery, veracity prediction, and display and explanation. The comparison of the findings on Weibo with those of existing work demonstrates nuanced patterns, suggesting the need for more research on data from diverse platforms, countries, or languages to tackle the global issue of false news. The code and new anonymized dataset are available at https://github.com/ICTMCG/Characterizing-Weibo-Multi-Domain-False-News.
Hearing voices at the National Library -- a speech corpus and acoustic model for the Swedish language
Authors: Martin Malmsten, Chris Haffenden, Love Börjeson
Date: 2022-05-06 00:00:00
Tasks: speech-recognition, Speech Recognition, Speech-to-Text

This paper explains our work in developing new acoustic models for automated speech recognition (ASR) at KBLab, the infrastructure for data-driven research at the National Library of Sweden (KB). We evaluate different approaches for a viable speech-to-text pipeline for audiovisual resources in Swedish, using the wav2vec 2.0 architecture in combination with speech corpuses created from KB's collections. These approaches include pretraining an acoustic model for Swedish from the ground up, and fine-tuning existing monolingual and multilingual models. The collections-based corpuses we use have been sampled from millions of hours of speech, with a conscious attempt to balance regional dialects to produce a more representative, and thus more democratic, model. The acoustic model this enabled, "VoxRex", outperforms existing models for Swedish ASR. We also evaluate combining this model with various pretrained language models, which further enhanced performance. We conclude by highlighting the potential of such technology for cultural heritage institutions with vast collections of previously unlabelled audiovisual data. Our models are released for further exploration and research here: https://huggingface.co/KBLab.
Aksharantar: Open Indic-language Transliteration datasets and models for the Next Billion Users
Authors: Yash Madhani, Sushane Parthan, Priyanka Bedekar, Gokul NC, Ruchi Khapra, Anoop Kunchukuttan, Pratyush Kumar, Mitesh M. Khapra
Date: 2022-05-06 00:00:00
Tasks: Transliteration

Transliteration is very important in the Indian language context due to the usage of multiple scripts and the widespread use of romanized inputs. However, few training and evaluation sets are publicly available. We introduce Aksharantar, the largest publicly available transliteration dataset for Indian languages created by mining from monolingual and parallel corpora, as well as collecting data from human annotators. The dataset contains 26 million transliteration pairs for 21 Indic languages from 3 language families using 12 scripts. Aksharantar is 21 times larger than existing datasets and is the first publicly available dataset for 7 languages and 1 language family. We also introduce the Aksharantar testset comprising 103k word pairs spanning 19 languages that enables a fine-grained analysis of transliteration models on native origin words, foreign words, frequent words, and rare words. Using the training set, we trained IndicXlit, a multilingual transliteration model that improves accuracy by 15% on the Dakshina test set, and establishes strong baselines on the Aksharantar testset introduced in this work. The models, mining scripts, transliteration guidelines, and datasets are available at https://github.com/AI4Bharat/IndicXlit under open-source licenses. We hope the availability of these large-scale, open resources will spur innovation for Indic language transliteration and downstream applications. We hope the availability of these large-scale, open resources will spur innovation for Indic language transliteration and downstream applications.
Automatic Noisy Label Correction for Fine-Grained Entity Typing
Authors: Weiran Pan, Wei Wei, Feida Zhu
Date: 2022-05-06 00:00:00
Tasks: Entity Typing

Fine-grained entity typing (FET) aims to assign proper semantic types to entity mentions according to their context, which is a fundamental task in various entity-leveraging applications. Current FET systems usually establish on large-scale weakly-supervised/distantly annotation data, which may contain abundant noise and thus severely hinder the performance of the FET task. Although previous studies have made great success in automatically identifying the noisy labels in FET, they usually rely on some auxiliary resources which may be unavailable in real-world applications (e.g. pre-defined hierarchical type structures, human-annotated subsets). In this paper, we propose a novel approach to automatically correct noisy labels for FET without external resources. Specifically, it first identifies the potentially noisy labels by estimating the posterior probability of a label being positive or negative according to the logits output by the model, and then relabel candidate noisy labels by training a robust model over the remaining clean labels. Experiments on two popular benchmarks prove the effectiveness of our method. Our source code can be obtained from https://github.com/CCIIPLab/DenoiseFET.