pwc-archive/papers-with-abstracts huggingface dataset:
Classical-to-Quantum Sequence Encoding in Genomics
Authors: Nouhaila Innan, Muhammad Al-Zafar Khan
Date: 2023-04-21 00:00:00

DNA sequencing allows for the determination of the genetic code of an organism, and therefore is an indispensable tool that has applications in Medicine, Life Sciences, Evolutionary Biology, Food Sciences and Technology, and Agriculture. In this paper, we present several novel methods of performing classical-to-quantum data encoding inspired by various mathematical fields, and we demonstrate these ideas within Bioinformatics. In particular, we introduce algorithms that draw inspiration from diverse fields such as Electrical and Electronic Engineering, Information Theory, Differential Geometry, and Neural Network architectures. We provide a complete overview of the existing data encoding schemes and show how to use them in Genomics. The algorithms provided utilise lossless compression, wavelet-based encoding, and information entropy. Moreover, we propose a contemporary method for testing encoded DNA sequences using Quantum Boltzmann Machines. To evaluate the effectiveness of our algorithms, we discuss a potential dataset that serves as a sandbox environment for testing against real-world scenarios. Our research contributes to developing classical-to-quantum data encoding methods in the science of Bioinformatics by introducing innovative algorithms that utilise diverse fields and advanced techniques. Our findings offer insights into the potential of Quantum Computing in Bioinformatics and have implications for future research in this area.
Eyettention: An Attention-based Dual-Sequence Model for Predicting Human Scanpaths during Reading
Authors: Shuwen Deng, David R. Reich, Paul Prasse, Patrick Haller, Tobias Scheffer, Lena A. Jäger
Date: 2023-04-21 00:00:00

Eye movements during reading offer insights into both the reader's cognitive processes and the characteristics of the text that is being read. Hence, the analysis of scanpaths in reading have attracted increasing attention across fields, ranging from cognitive science over linguistics to computer science. In particular, eye-tracking-while-reading data has been argued to bear the potential to make machine-learning-based language models exhibit a more human-like linguistic behavior. However, one of the main challenges in modeling human scanpaths in reading is their dual-sequence nature: the words are ordered following the grammatical rules of the language, whereas the fixations are chronologically ordered. As humans do not strictly read from left-to-right, but rather skip or refixate words and regress to previous words, the alignment of the linguistic and the temporal sequence is non-trivial. In this paper, we develop Eyettention, the first dual-sequence model that simultaneously processes the sequence of words and the chronological sequence of fixations. The alignment of the two sequences is achieved by a cross-sequence attention mechanism. We show that Eyettention outperforms state-of-the-art models in predicting scanpaths. We provide an extensive within- and across-data set evaluation on different languages. An ablation study and qualitative analysis support an in-depth understanding of the model's behavior.
Denial-of-Service or Fine-Grained Control: Towards Flexible Model Poisoning Attacks on Federated Learning
Authors: Hangtao Zhang, Zeming Yao, Leo Yu Zhang, Shengshan Hu, Chao Chen, Alan Liew, Zhetao Li
Date: 2023-04-21 00:00:00
Tasks: Federated Learning, Model Poisoning

Federated learning (FL) is vulnerable to poisoning attacks, where adversaries corrupt the global aggregation results and cause denial-of-service (DoS). Unlike recent model poisoning attacks that optimize the amplitude of malicious perturbations along certain prescribed directions to cause DoS, we propose a Flexible Model Poisoning Attack (FMPA) that can achieve versatile attack goals. We consider a practical threat scenario where no extra knowledge about the FL system (e.g., aggregation rules or updates on benign devices) is available to adversaries. FMPA exploits the global historical information to construct an estimator that predicts the next round of the global model as a benign reference. It then fine-tunes the reference model to obtain the desired poisoned model with low accuracy and small perturbations. Besides the goal of causing DoS, FMPA can be naturally extended to launch a fine-grained controllable attack, making it possible to precisely reduce the global accuracy. Armed with precise control, malicious FL service providers can gain advantages over their competitors without getting noticed, hence opening a new attack surface in FL other than DoS. Even for the purpose of DoS, experiments show that FMPA significantly decreases the global accuracy, outperforming six state-of-the-art attacks.
How good are variational autoencoders at transfer learning?
Authors: Lisa Bonheme, Marek Grzes
Date: 2023-04-21 00:00:00
Tasks: Medical Image Analysis, Music Generation, Transfer Learning

Variational autoencoders (VAEs) are used for transfer learning across various research domains such as music generation or medical image analysis. However, there is no principled way to assess before transfer which components to retrain or whether transfer learning is likely to help on a target task. We propose to explore this question through the lens of representational similarity. Specifically, using Centred Kernel Alignment (CKA) to evaluate the similarity of VAEs trained on different datasets, we show that encoders' representations are generic but decoders' specific. Based on these insights, we discuss the implications for selecting which components of a VAE to retrain and propose a method to visually assess whether transfer learning is likely to help on classification tasks.
Multi-Modal Deep Learning for Credit Rating Prediction Using Text and Numerical Data Streams
Authors: Mahsa Tavakoli, Rohitash Chandra, Fengrui Tian, Cristián Bravo
Date: 2023-04-21 00:00:00
Tasks: Decision Making, Deep Learning

Knowing which factors are significant in credit rating assignment leads to better decision-making. However, the focus of the literature thus far has been mostly on structured data, and fewer studies have addressed unstructured or multi-modal datasets. In this paper, we present an analysis of the most effective architectures for the fusion of deep learning models for the prediction of company credit rating classes, by using structured and unstructured datasets of different types. In these models, we tested different combinations of fusion strategies with different deep learning models, including CNN, LSTM, GRU, and BERT. We studied data fusion strategies in terms of level (including early and intermediate fusion) and techniques (including concatenation and cross-attention). Our results show that a CNN-based multi-modal model with two fusion strategies outperformed other multi-modal techniques. In addition, by comparing simple architectures with more complex ones, we found that more sophisticated deep learning models do not necessarily produce the highest performance; however, if attention-based models are producing the best results, cross-attention is necessary as a fusion strategy. Finally, our comparison of rating agencies on short-, medium-, and long-term performance shows that Moody's credit ratings outperform those of other agencies like Standard & Poor's and Fitch Ratings.
Schooling to Exploit Foolish Contracts
Authors: Tamer Abdelaziz, Aquinas Hobor
Date: 2023-04-21 00:00:00
Tasks: Feature Engineering

We introduce SCooLS, our Smart Contract Learning (Semi-supervised) engine. SCooLS uses neural networks to analyze Ethereum contract bytecode and identifies specific vulnerable functions. SCooLS incorporates two key elements: semi-supervised learning and graph neural networks (GNNs). Semi-supervised learning produces more accurate models than unsupervised learning, while not requiring the large oracle-labeled training set that supervised learning requires. GNNs enable direct analysis of smart contract bytecode without any manual feature engineering, predefined patterns, or expert rules. SCooLS is the first application of semi-supervised learning to smart contract vulnerability analysis, as well as the first deep learning-based vulnerability analyzer to identify specific vulnerable functions. SCooLS's performance is better than existing tools, with an accuracy level of 98.4%, an F1 score of 90.5%, and an exceptionally low false positive rate of only 0.8%. Furthermore, SCooLS is fast, analyzing a typical function in 0.05 seconds. We leverage SCooLS's ability to identify specific vulnerable functions to build an exploit generator, which was successful in stealing Ether from 76.9% of the true positives.
Smart Learning to Find Dumb Contracts (Extended Version)
Authors: Tamer Abdelaziz, Aquinas Hobor
Date: 2023-04-21 00:00:00
Tasks: Feature Engineering, Vulnerability Detection

We introduce the Deep Learning Vulnerability Analyzer (DLVA) for Ethereum smart contracts based on neural networks. We train DLVA to judge bytecode even though the supervising oracle can only judge source. DLVA's training algorithm is general: we extend a source code analysis to bytecode without any manual feature engineering, predefined patterns, or expert rules. DLVA's training algorithm is also robust: it overcame a 1.25% error rate mislabeled contracts, and--the student surpassing the teacher--found vulnerable contracts that Slither mislabeled. DLVA is much faster than other smart contract vulnerability detectors: DLVA checks contracts for 29 vulnerabilities in 0.2 seconds, a 10-1,000x speedup. DLVA has three key components. First, Smart Contract to Vector (SC2V) uses neural networks to map smart contract bytecode to a high-dimensional floating-point vector. We benchmark SC2V against 4 state-of-the-art graph neural networks and show that it improves model differentiation by 2.2%. Second, Sibling Detector (SD) classifies contracts when a target contract's vector is Euclidian-close to a labeled contract's vector in a training set; although only able to judge 55.7% of the contracts in our test set, it has a Slither-predictive accuracy of 97.4% with a false positive rate of only 0.1%. Third, Core Classifier (CC) uses neural networks to infer vulnerable contracts regardless of vector distance. We benchmark DLVA's CC with 10 ML techniques and show that the CC improves accuracy by 11.3%. Overall, DLVA predicts Slither's labels with an overall accuracy of 92.7% and associated false positive rate of 7.2%. Lastly, we benchmark DLVA against nine well-known smart contract analysis tools. Despite using much less analysis time, DLVA completed every query, leading the pack with an average accuracy of 99.7%, pleasingly balancing high true positive rates with low false positive rates.
Physics-informed Neural Network Combined with Characteristic-Based Split for Solving Navier-Stokes Equations
Authors: Shuang Hu, Meiqin Liu, Senlin Zhang, Shanling Dong, Ronghao Zheng
Date: 2023-04-21 00:00:00

In this paper, physics-informed neural network (PINN) based on characteristic-based split (CBS) is proposed, which can be used to solve the time-dependent Navier-Stokes equations (N-S equations). In this method, The output parameters and corresponding losses are separated, so the weights between output parameters are not considered. Not all partial derivatives participate in gradient backpropagation, and the remaining terms will be reused.Therefore, compared with traditional PINN, this method is a rapid version. Here, labeled data, physical constraints and network outputs are regarded as priori information, and the residuals of the N-S equations are regarded as posteriori information. So this method can deal with both data-driven and data-free problems. As a result, it can solve the special form of compressible N-S equations -- -Shallow-Water equations, and incompressible N-S equations. As boundary conditions are known, this method only needs the flow field information at a certain time to restore the past and future flow field information. We solve the progress of a solitary wave onto a shelving beach and the dispersion of the hot water in the flow, which show this method's potential in the marine engineering. We also use incompressible equations with exact solutions to prove this method's correctness and universality. We find that PINN needs more strict boundary conditions to solve the N-S equation, because it has no computational boundary compared with the finite element method.
Persistently Trained, Diffusion-assisted Energy-based Models
Authors: Xinwei Zhang, Zhiqiang Tan, Zhijian Ou
Date: 2023-04-21 00:00:00
Tasks: Density Estimation, Image Generation, Out-of-Distribution Detection

Maximum likelihood (ML) learning for energy-based models (EBMs) is challenging, partly due to non-convergence of Markov chain Monte Carlo.Several variations of ML learning have been proposed, but existing methods all fail to achieve both post-training image generation and proper density estimation. We propose to introduce diffusion data and learn a joint EBM, called diffusion assisted-EBMs, through persistent training (i.e., using persistent contrastive divergence) with an enhanced sampling algorithm to properly sample from complex, multimodal distributions. We present results from a 2D illustrative experiment and image experiments and demonstrate that, for the first time for image data, persistently trained EBMs can {\it simultaneously} achieve long-run stability, post-training image generation, and superior out-of-distribution detection.
Power Grid Behavioral Patterns and Risks of Generalization in Applied Machine Learning
Authors: Shimiao Li, Jan Drgona, Shrirang Abhyankar, Larry Pileggi
Date: 2023-04-21 00:00:00

Recent years have seen a rich literature of data-driven approaches designed for power grid applications. However, insufficient consideration of domain knowledge can impose a high risk to the practicality of the methods. Specifically, ignoring the grid-specific spatiotemporal patterns (in load, generation, and topology, etc.) can lead to outputting infeasible, unrealizable, or completely meaningless predictions on new inputs. To address this concern, this paper investigates real-world operational data to provide insights into power grid behavioral patterns, including the time-varying topology, load, and generation, as well as the spatial differences (in peak hours, diverse styles) between individual loads and generations. Then based on these observations, we evaluate the generalization risks in some existing ML works causedby ignoring these grid-specific patterns in model design and training.
A generalised multi-factor deep learning electricity load forecasting model for wildfire-prone areas
Authors: Weijia Yang, Sarah N. Sparrow, David C. H. Wallom
Date: 2023-04-21 00:00:00
Tasks: feature selection, Load Forecasting

This paper proposes a generalised and robust multi-factor Gated Recurrent Unit (GRU) based Deep Learning (DL) model to forecast electricity load in distribution networks during wildfire seasons. The flexible modelling methods consider data input structure, calendar effects and correlation-based leading temperature conditions. Compared to the regular use of instantaneous temperature, the Mean Absolute Percentage Error (MAPE) is decreased by 30.73% by using the proposed input feature selection and leading temperature relationships. Our model is generalised and applied to eight real distribution networks in Victoria, Australia, during the wildfire seasons of 2015-2020. We demonstrate that the GRU-based model consistently outperforms another DL model, Long Short-Term Memory (LSTM), at every step, giving average improvements in Mean Squared Error (MSE) and MAPE of 10.06% and 12.86%, respectively. The sensitivity to large-scale climate variability in training data sets, e.g. El Ni\~no or La Ni\~na years, is considered to understand the possible consequences for load forecasting performance stability, showing minimal impact. Other factors such as regional poverty rate and large-scale off-peak electricity use are potential factors to further improve forecast performance. The proposed method achieves an average forecast MAPE of around 3%, giving a potential annual energy saving of AU\$80.46 million for the state of Victoria.
Train Your Own GNN Teacher: Graph-Aware Distillation on Textual Graphs
Authors: Costas Mavromatis, Vassilis N. Ioannidis, Shen Wang, Da Zheng, Soji Adeshina, Jun Ma, Han Zhao, Christos Faloutsos, George Karypis
Date: 2023-04-20 00:00:00
Tasks: Knowledge Distillation, Node Classification

How can we learn effective node representations on textual graphs? Graph Neural Networks (GNNs) that use Language Models (LMs) to encode textual information of graphs achieve state-of-the-art performance in many node classification tasks. Yet, combining GNNs with LMs has not been widely explored for practical deployments due to its scalability issues. In this work, we tackle this challenge by developing a Graph-Aware Distillation framework (GRAD) to encode graph structures into an LM for graph-free, fast inference. Different from conventional knowledge distillation, GRAD jointly optimizes a GNN teacher and a graph-free student over the graph's nodes via a shared LM. This encourages the graph-free student to exploit graph information encoded by the GNN teacher while at the same time, enables the GNN teacher to better leverage textual information from unlabeled nodes. As a result, the teacher and the student models learn from each other to improve their overall performance. Experiments in eight node classification benchmarks in both transductive and inductive settings showcase GRAD's superiority over existing distillation approaches for textual graphs.
Scaling ML Products At Startups: A Practitioner's Guide
Authors: Atul Dhingra, Gaurav Sood
Date: 2023-04-20 00:00:00

How do you scale a machine learning product at a startup? In particular, how do you serve a greater volume, velocity, and variety of queries cost-effectively? We break down costs into variable costs-the cost of serving the model and performant-and fixed costs-the cost of developing and training new models. We propose a framework for conceptualizing these costs, breaking them into finer categories, and limn ways to reduce costs. Lastly, since in our experience, the most expensive fixed cost of a machine learning system is the cost of identifying the root causes of failures and driving continuous improvement, we present a way to conceptualize the issues and share our methodology for the same.
The Dataset Multiplicity Problem: How Unreliable Data Impacts Predictions
Authors: Anna P. Meyer, Aws Albarghouthi, Loris D'Antoni
Date: 2023-04-20 00:00:00
Tasks: counterfactual

We introduce dataset multiplicity, a way to study how inaccuracies, uncertainty, and social bias in training datasets impact test-time predictions. The dataset multiplicity framework asks a counterfactual question of what the set of resultant models (and associated test-time predictions) would be if we could somehow access all hypothetical, unbiased versions of the dataset. We discuss how to use this framework to encapsulate various sources of uncertainty in datasets' factualness, including systemic social bias, data collection practices, and noisy labels or features. We show how to exactly analyze the impacts of dataset multiplicity for a specific model architecture and type of uncertainty: linear models with label errors. Our empirical analysis shows that real-world datasets, under reasonable assumptions, contain many test samples whose predictions are affected by dataset multiplicity. Furthermore, the choice of domain-specific dataset multiplicity definition determines what samples are affected, and whether different demographic groups are disparately impacted. Finally, we discuss implications of dataset multiplicity for machine learning practice and research, including considerations for when model outcomes should not be trusted.
Learning a quantum computer's capability
Authors: Daniel Hothem, Kevin Young, Tommie Catanach, Timothy Proctor
Date: 2023-04-20 00:00:00
Tasks: Benchmarking

Accurately predicting a quantum computer's capability -- which circuits it can run and how well it can run them -- is a foundational goal of quantum characterization and benchmarking. As modern quantum computers become increasingly hard to simulate, we must develop accurate and scalable predictive capability models to help researchers and stakeholders decide which quantum computers to build and use. In this work, we propose a hardware-agnostic method to efficiently construct scalable predictive models of a quantum computer's capability for almost any class of circuits, and demonstrate our method using convolutional neural networks (CNNs). Our CNN-based approach works by efficiently representing a circuit as a three-dimensional tensor and then using a CNN to predict its success rate. Our CNN capability models obtain approximately a $1\%$ average absolute prediction error when modeling processors experiencing both Markovian and non-Markovian stochastic Pauli errors. We also apply our CNNs to model the capabilities of cloud-access quantum computing systems, obtaining moderate prediction accuracy (average absolute error around $2-5\%$), and we highlight the challenges to building better neural network capability models.
Activity Classification Using Unsupervised Domain Transfer from Body Worn Sensors
Authors: Chaitra Hedge, Gezheng Wen, Layne C. Price
Date: 2023-04-20 00:00:00
Tasks: Classification

Activity classification has become a vital feature of wearable health tracking devices. As innovation in this field grows, wearable devices worn on different parts of the body are emerging. To perform activity classification on a new body location, labeled data corresponding to the new locations are generally required, but this is expensive to acquire. In this work, we present an innovative method to leverage an existing activity classifier, trained on Inertial Measurement Unit (IMU) data from a reference body location (the source domain), in order to perform activity classification on a new body location (the target domain) in an unsupervised way, i.e. without the need for classification labels at the new location. Specifically, given an IMU embedding model trained to perform activity classification at the source domain, we train an embedding model to perform activity classification at the target domain by replicating the embeddings at the source domain. This is achieved using simultaneous IMU measurements at the source and target domains. The replicated embeddings at the target domain are used by a classification model that has previously been trained on the source domain to perform activity classification at the target domain. We have evaluated the proposed methods on three activity classification datasets PAMAP2, MHealth, and Opportunity, yielding high F1 scores of 67.19%, 70.40% and 68.34%, respectively when the source domain is the wrist and the target domain is the torso.