pwc-archive/papers-with-abstracts huggingface dataset:
Lightweight Transformers for Clinical Natural Language Processing
Authors: Omid Rohanian, Mohammadmahdi Nouriborji, Hannah Jauncey, Samaneh Kouchaki, ISARIC Clinical Characterisation Group, Lei Clifton, Laura Merson, David A. Clifton
Date: 2023-02-09 00:00:00
Tasks: Continual Learning, Knowledge Distillation, named-entity-recognition, Named Entity Recognition, Named Entity Recognition (NER), Natural Language Inference, Relation Extraction

Specialised pre-trained language models are becoming more frequent in NLP since they can potentially outperform models trained on generic texts. BioBERT and BioClinicalBERT are two examples of such models that have shown promise in medical NLP tasks. Many of these models are overparametrised and resource-intensive, but thanks to techniques like Knowledge Distillation (KD), it is possible to create smaller versions that perform almost as well as their larger counterparts. In this work, we specifically focus on development of compact language models for processing clinical texts (i.e. progress notes, discharge summaries etc). We developed a number of efficient lightweight clinical transformers using knowledge distillation and continual learning, with the number of parameters ranging from 15 million to 65 million. These models performed comparably to larger models such as BioBERT and ClinicalBioBERT and significantly outperformed other compact models trained on general or biomedical data. Our extensive evaluation was done across several standard datasets and covered a wide range of clinical text-mining tasks, including Natural Language Inference, Relation Extraction, Named Entity Recognition, and Sequence Classification. To our knowledge, this is the first comprehensive study specifically focused on creating efficient and compact transformers for clinical NLP tasks. The models and code used in this study can be found on our Huggingface profile at https://huggingface.co/nlpie and Github page at https://github.com/nlpie-research/Lightweight-Clinical-Transformers, respectively, promoting reproducibility of our results.
Zero-Shot Learning for Requirements Classification: An Exploratory Study
Authors: Waad Alhoshan, Alessio Ferrari, Liping Zhao
Date: 2023-02-09 00:00:00
Tasks: Classification, Word Embeddings, Zero-Shot Learning

Context: Requirements engineering researchers have been experimenting with machine learning and deep learning approaches for a range of RE tasks, such as requirements classification, requirements tracing, ambiguity detection, and modelling. However, most of today's ML/DL approaches are based on supervised learning techniques, meaning that they need to be trained using a large amount of task-specific labelled training data. This constraint poses an enormous challenge to RE researchers, as the lack of labelled data makes it difficult for them to fully exploit the benefit of advanced ML/DL technologies. Objective: This paper addresses this problem by showing how a zero-shot learning approach can be used for requirements classification without using any labelled training data. We focus on the classification task because many RE tasks can be framed as classification problems. Method: The ZSL approach used in our study employs contextual word-embeddings and transformer-based language models. We demonstrate this approach through a series of experiments to perform three classification tasks: (1)FR/NFR: classification functional requirements vs non-functional requirements; (2)NFR: identification of NFR classes; (3)Security: classification of security vs non-security requirements. Results: The study shows that the ZSL approach achieves an F1 score of 0.66 for the FR/NFR task. For the NFR task, the approach yields F1~0.72-0.80, considering the most frequent classes. For the Security task, F1~0.66. All of the aforementioned F1 scores are achieved with zero-training efforts. Conclusion: This study demonstrates the potential of ZSL for requirements classification. An important implication is that it is possible to have very little or no training data to perform classification tasks. The proposed approach thus contributes to the solution of the long-standing problem of data shortage in RE.
Scaling Goal-based Exploration via Pruning Proto-goals
Authors: Akhil Bagaria, Ray Jiang, Ramana Kumar, Tom Schaul
Date: 2023-02-09 00:00:00
Tasks: reinforcement-learning, Reinforcement Learning (RL)

One of the gnarliest challenges in reinforcement learning (RL) is exploration that scales to vast domains, where novelty-, or coverage-seeking behaviour falls short. Goal-directed, purposeful behaviours are able to overcome this, but rely on a good goal space. The core challenge in goal discovery is finding the right balance between generality (not hand-crafted) and tractability (useful, not too many). Our approach explicitly seeks the middle ground, enabling the human designer to specify a vast but meaningful proto-goal space, and an autonomous discovery process to refine this to a narrower space of controllable, reachable, novel, and relevant goals. The effectiveness of goal-conditioned exploration with the latter is then demonstrated in three challenging environments.
Learning Mixtures of Markov Chains with Quality Guarantees
Authors: Fabian Spaeh, Charalampos E. Tsourakakis
Date: 2023-02-09 00:00:00

A large number of modern applications ranging from listening songs online and browsing the Web to using a navigation app on a smartphone generate a plethora of user trails. Clustering such trails into groups with a common sequence pattern can reveal significant structure in human behavior that can lead to improving user experience through better recommendations, and even prevent suicides [LMCR14]. One approach to modeling this problem mathematically is as a mixture of Markov chains. Recently, Gupta, Kumar and Vassilvitski [GKV16] introduced an algorithm (GKV-SVD) based on the singular value decomposition (SVD) that under certain conditions can perfectly recover a mixture of L chains on n states, given only the distribution of trails of length 3 (3-trail). In this work we contribute to the problem of unmixing Markov chains by highlighting and addressing two important constraints of the GKV-SVD algorithm [GKV16]: some chains in the mixture may not even be weakly connected, and secondly in practice one does not know beforehand the true number of chains. We resolve these issues in the Gupta et al. paper [GKV16]. Specifically, we propose an algebraic criterion that enables us to choose a value of L efficiently that avoids overfitting. Furthermore, we design a reconstruction algorithm that outputs the true mixture in the presence of disconnected chains and is robust to noise. We complement our theoretical results with experiments on both synthetic and real data, where we observe that our method outperforms the GKV-SVD algorithm. Finally, we empirically observe that combining an EM-algorithm with our method performs best in practice, both in terms of reconstruction error with respect to the distribution of 3-trails and the mixture of Markov Chains.
Mixed-order self-paced curriculum learning for universal lesion detection
Authors: Han Li, Hu Han, S. Kevin Zhou
Date: 2023-02-09 00:00:00
Tasks: Lesion Detection, Medical Image Analysis

Self-paced curriculum learning (SCL) has demonstrated its great potential in computer vision, natural language processing, etc. During training, it implements easy-to-hard sampling based on online estimation of data difficulty. Most SCL methods commonly adopt a loss-based strategy of estimating data difficulty and deweighting the `hard' samples in the early training stage. While achieving success in a variety of applications, SCL stills confront two challenges in a medical image analysis task, such as universal lesion detection, featuring insufficient and highly class-imbalanced data: (i) the loss-based difficulty measurer is inaccurate; ii) the hard samples are under-utilized from a deweighting mechanism. To overcome these challenges, in this paper we propose a novel mixed-order self-paced curriculum learning (Mo-SCL) method. We integrate both uncertainty and loss to better estimate difficulty online and mix both hard and easy samples in the same mini-batch to appropriately alleviate the problem of under-utilization of hard samples. We provide a theoretical investigation of our method in the context of stochastic gradient descent optimization and extensive experiments based on the DeepLesion benchmark dataset for universal lesion detection (ULD). When applied to two state-of-the-art ULD methods, the proposed mixed-order SCL method can provide a free boost to lesion detection accuracy without extra special network designs.
ManiSkill2: A Unified Benchmark for Generalizable Manipulation Skills
Authors: Jiayuan Gu, Fanbo Xiang, Xuanlin Li, Zhan Ling, Xiqiang Liu, Tongzhou Mu, Yihe Tang, Stone Tao, Xinyue Wei, Yunchao Yao, Xiaodi Yuan, Pengwei Xie, Zhiao Huang, Rui Chen, Hao Su
Date: 2023-02-09 00:00:00
Tasks: GPU, Imitation Learning, Reinforcement Learning (RL), Robot Manipulation

Generalizable manipulation skills, which can be composed to tackle long-horizon and complex daily chores, are one of the cornerstones of Embodied AI. However, existing benchmarks, mostly composed of a suite of simulatable environments, are insufficient to push cutting-edge research works because they lack object-level topological and geometric variations, are not based on fully dynamic simulation, or are short of native support for multiple types of manipulation tasks. To this end, we present ManiSkill2, the next generation of the SAPIEN ManiSkill benchmark, to address critical pain points often encountered by researchers when using benchmarks for generalizable manipulation skills. ManiSkill2 includes 20 manipulation task families with 2000+ object models and 4M+ demonstration frames, which cover stationary/mobile-base, single/dual-arm, and rigid/soft-body manipulation tasks with 2D/3D-input data simulated by fully dynamic engines. It defines a unified interface and evaluation protocol to support a wide range of algorithms (e.g., classic sense-plan-act, RL, IL), visual observations (point cloud, RGBD), and controllers (e.g., action type and parameterization). Moreover, it empowers fast visual input learning algorithms so that a CNN-based policy can collect samples at about 2000 FPS with 1 GPU and 16 processes on a regular workstation. It implements a render server infrastructure to allow sharing rendering resources across all environments, thereby significantly reducing memory usage. We open-source all codes of our benchmark (simulator, environments, and baselines) and host an online challenge open to interdisciplinary researchers.
Better Diffusion Models Further Improve Adversarial Training
Authors: Zekai Wang, Tianyu Pang, Chao Du, Min Lin, Weiwei Liu, Shuicheng Yan
Date: 2023-02-09 00:00:00
Tasks: Denoising

It has been recognized that the data generated by the denoising diffusion probabilistic model (DDPM) improves adversarial training. After two years of rapid development in diffusion models, a question naturally arises: can better diffusion models further improve adversarial training? This paper gives an affirmative answer by employing the most recent diffusion model which has higher efficiency ($\sim 20$ sampling steps) and image quality (lower FID score) compared with DDPM. Our adversarially trained models achieve state-of-the-art performance on RobustBench using only generated data (no external datasets). Under the $\ell_\infty$-norm threat model with $\epsilon=8/255$, our models achieve $70.69\%$ and $42.67\%$ robust accuracy on CIFAR-10 and CIFAR-100, respectively, i.e. improving upon previous state-of-the-art models by $+4.58\%$ and $+8.03\%$. Under the $\ell_2$-norm threat model with $\epsilon=128/255$, our models achieve $84.86\%$ on CIFAR-10 ($+4.44\%$). These results also beat previous works that use external data. We also provide compelling results on the SVHN and TinyImageNet datasets. Our code is available at https://github.com/wzekai99/DM-Improves-AT.
A Text-guided Protein Design Framework
Authors: Shengchao Liu, Yanjing Li, Zhuoxinran Li, Anthony Gitter, Yutao Zhu, Jiarui Lu, Zhao Xu, Weili Nie, Arvind Ramanathan, Chaowei Xiao, Jian Tang, Hongyu Guo, Anima Anandkumar
Date: 2023-02-09 00:00:00
Tasks: Decoder, Property Prediction, Protein Design

Current AI-assisted protein design mainly utilizes protein sequential and structural information. Meanwhile, there exists tremendous knowledge curated by humans in the text format describing proteins' high-level functionalities. Yet, whether the incorporation of such text data can help protein design tasks has not been explored. To bridge this gap, we propose ProteinDT, a multi-modal framework that leverages textual descriptions for protein design. ProteinDT consists of three subsequent steps: ProteinCLAP which aligns the representation of two modalities, a facilitator that generates the protein representation from the text modality, and a decoder that creates the protein sequences from the representation. To train ProteinDT, we construct a large dataset, SwissProtCLAP, with 441K text and protein pairs. We quantitatively verify the effectiveness of ProteinDT on three challenging tasks: (1) over 90% accuracy for text-guided protein generation; (2) best hit ratio on 12 zero-shot text-guided protein editing tasks; (3) superior performance on four out of six protein property prediction benchmarks.
Contestable Camera Cars: A Speculative Design Exploration of Public AI That Is Open and Responsive to Dispute
Authors: Kars Alfrink, Ianus Keller, Neelke Doorn, Gerd Kortuem
Date: 2023-02-09 00:00:00
Tasks: Decision Making

Local governments increasingly use artificial intelligence (AI) for automated decision-making. Contestability, making systems responsive to dispute, is a way to ensure they respect human rights to autonomy and dignity. We investigate the design of public urban AI systems for contestability through the example of camera cars: human-driven vehicles equipped with image sensors. Applying a provisional framework for contestable AI, we use speculative design to create a concept video of a contestable camera car. Using this concept video, we then conduct semi-structured interviews with 17 civil servants who work with AI employed by a large northwestern European city. The resulting data is analyzed using reflexive thematic analysis to identify the main challenges facing the implementation of contestability in public AI. We describe how civic participation faces issues of representation, public AI systems should integrate with existing democratic practices, and cities must expand capacities for responsible AI development and operation.
Plan-Based Derivation of General Functional Structures in Product Design
Authors: Philipp Rosenthal, Niels Demke, Frank Mantwill, Oliver Niggemann
Date: 2023-02-09 00:00:00

In product design, a decomposition of the overall product function into a set of smaller, interacting functions is usually considered a crucial first step for any computer-supported design tool. Here, we propose a new approach for the decomposition of functions especially suited for later solutions based on Artificial Intelligence. The presented approach defines the decomposition problem in terms of a planning problem--a well established field in Artificial Intelligence. For the planning problem, logic-based solvers can be used to find solutions that compute a useful function structure for the design process. Well-known function libraries from engineering are used as atomic planning steps. The algorithms are evaluated using two different application examples to ensure the transferability of a general function decomposition.
Principled and Efficient Motif Finding for Structure Learning of Lifted Graphical Models
Authors: Jonathan Feldstein, Dominic Phillips, Efthymia Tsamoura
Date: 2023-02-09 00:00:00
Tasks: Clustering, Relational Reasoning

Structure learning is a core problem in AI central to the fields of neuro-symbolic AI and statistical relational learning. It consists in automatically learning a logical theory from data. The basis for structure learning is mining repeating patterns in the data, known as structural motifs. Finding these patterns reduces the exponential search space and therefore guides the learning of formulas. Despite the importance of motif learning, it is still not well understood. We present the first principled approach for mining structural motifs in lifted graphical models, languages that blend first-order logic with probabilistic models, which uses a stochastic process to measure the similarity of entities in the data. Our first contribution is an algorithm, which depends on two intuitive hyperparameters: one controlling the uncertainty in the entity similarity measure, and one controlling the softness of the resulting rules. Our second contribution is a preprocessing step where we perform hierarchical clustering on the data to reduce the search space to the most relevant data. Our third contribution is to introduce an O(n ln n) (in the size of the entities in the data) algorithm for clustering structurally-related data. We evaluate our approach using standard benchmarks and show that we outperform state-of-the-art structure learning approaches by up to 6% in terms of accuracy and up to 80% in terms of runtime.
Generating a Structured Summary of Numerous Academic Papers: Dataset and Method
Authors: Shuaiqi Liu, Jiannong Cao, Ruosong Yang, Zhiyuan Wen
Date: 2023-02-09 00:00:00
Tasks: Document Summarization, Multi-Document Summarization, Survey

Writing a survey paper on one research topic usually needs to cover the salient content from numerous related papers, which can be modeled as a multi-document summarization (MDS) task. Existing MDS datasets usually focus on producing the structureless summary covering a few input documents. Meanwhile, previous structured summary generation works focus on summarizing a single document into a multi-section summary. These existing datasets and methods cannot meet the requirements of summarizing numerous academic papers into a structured summary. To deal with the scarcity of available data, we propose BigSurvey, the first large-scale dataset for generating comprehensive summaries of numerous academic papers on each topic. We collect target summaries from more than seven thousand survey papers and utilize their 430 thousand reference papers' abstracts as input documents. To organize the diverse content from dozens of input documents and ensure the efficiency of processing long text sequences, we propose a summarization method named category-based alignment and sparse transformer (CAST). The experimental results show that our CAST method outperforms various advanced summarization methods.
Adversarial Example Does Good: Preventing Painting Imitation from Diffusion Models via Adversarial Examples
Authors: Chumeng Liang, Xiaoyu Wu, Yang Hua, Jiaru Zhang, Yiming Xue, Tao Song, Zhengui Xue, Ruhui Ma, Haibing Guan
Date: 2023-02-09 00:00:00

Recently, Diffusion Models (DMs) boost a wave in AI for Art yet raise new copyright concerns, where infringers benefit from using unauthorized paintings to train DMs to generate novel paintings in a similar style. To address these emerging copyright violations, in this paper, we are the first to explore and propose to utilize adversarial examples for DMs to protect human-created artworks. Specifically, we first build a theoretical framework to define and evaluate the adversarial examples for DMs. Then, based on this framework, we design a novel algorithm, named AdvDM, which exploits a Monte-Carlo estimation of adversarial examples for DMs by optimizing upon different latent variables sampled from the reverse process of DMs. Extensive experiments show that the generated adversarial examples can effectively hinder DMs from extracting their features. Therefore, our method can be a powerful tool for human artists to protect their copyright against infringers equipped with DM-based AI-for-Art applications. The code of our method is available on GitHub: https://github.com/mist-project/mist.git.
NLP-based Decision Support System for Examination of Eligibility Criteria from Securities Prospectuses at the German Central Bank
Authors: Christian Hänig, Markus Schlösser, Serhii Hamotskyi, Gent Zambaku, Janek Blankenburg
Date: 2023-02-09 00:00:00
Tasks: Decision Making

As part of its digitization initiative, the German Central Bank (Deutsche Bundesbank) wants to examine the extent to which natural Language Processing (NLP) can be used to make independent decisions upon the eligibility criteria of securities prospectuses. Every month, the Directorate General Markets at the German Central Bank receives hundreds of scanned prospectuses in PDF format, which must be manually processed to decide upon their eligibility. We found that this tedious and time-consuming process can be (semi-)automated by employing modern NLP model architectures, which learn the linguistic feature representation in text to identify the present eligible and ineligible criteria. The proposed Decision Support System provides decisions of document-level eligibility criteria accompanied by human-understandable explanations of the decisions. The aim of this project is to model the described use case and to evaluate the extent to which current research results from the field of NLP can be applied to this problem. After creating a heterogeneous domain-specific dataset containing annotations of eligible and non-eligible mentions of relevant criteria, we were able to successfully build, train and deploy a semi-automatic decider model. This model is based on transformer-based language models and decision trees, which integrate the established rule-based parts of the decision processes. Results suggest that it is possible to efficiently model the problem and automate decision making to more than 90% for many of the considered eligibility criteria.
Weakly Supervised Anomaly Detection: A Survey
Authors: Minqi Jiang, Chaochuan Hou, Ao Zheng, Xiyang Hu, Songqiao Han, Hailiang Huang, Xiangnan He, Philip S. Yu, Yue Zhao
Date: 2023-02-09 00:00:00
Tasks: Anomaly Detection, Supervised Anomaly Detection, Survey, Time Series, Time Series Analysis, Weakly-supervised Anomaly Detection

Anomaly detection (AD) is a crucial task in machine learning with various applications, such as detecting emerging diseases, identifying financial frauds, and detecting fake news. However, obtaining complete, accurate, and precise labels for AD tasks can be expensive and challenging due to the cost and difficulties in data annotation. To address this issue, researchers have developed AD methods that can work with incomplete, inexact, and inaccurate supervision, collectively summarized as weakly supervised anomaly detection (WSAD) methods. In this study, we present the first comprehensive survey of WSAD methods by categorizing them into the above three weak supervision settings across four data modalities (i.e., tabular, graph, time-series, and image/video data). For each setting, we provide formal definitions, key algorithms, and potential future directions. To support future research, we conduct experiments on a selected setting and release the source code, along with a collection of WSAD methods and data.