pwc-archive/papers-with-abstracts huggingface dataset:
From WSI-level to Patch-level: Structure Prior Guided Binuclear Cell Fine-grained Detection
Authors: Baomin Wang, Geng Hu, Dan Chen, Lihua Hu, Cheng Li, Yu An, Guiping Hu, Guang Jia
Date: 2022-08-26 00:00:00
Tasks: whole slide images

Accurately and quickly binuclear cell (BC) detection plays a significant role in predicting the risk of leukemia and other malignant tumors. However, manual microscopy counting is time-consuming and lacks objectivity. Moreover, with the limitation of staining quality and diversity of morphology features in BC microscopy whole slide images (WSIs), traditional image processing approaches are helpless. To overcome this challenge, we propose a two-stage detection method inspired by the structure prior of BC based on deep learning, which cascades to implement BCs coarse detection at the WSI-level and fine-grained classification in patch-level. The coarse detection network is a multi-task detection framework based on circular bounding boxes for cells detection, and central key points for nucleus detection. The circle representation reduces the degrees of freedom, mitigates the effect of surrounding impurities compared to usual rectangular boxes and can be rotation invariant in WSI. Detecting key points in the nucleus can assist network perception and be used for unsupervised color layer segmentation in later fine-grained classification. The fine classification network consists of a background region suppression module based on color layer mask supervision and a key region selection module based on a transformer due to its global modeling capability. Additionally, an unsupervised and unpaired cytoplasm generator network is firstly proposed to expand the long-tailed distribution dataset. Finally, experiments are performed on BC multicenter datasets. The proposed BC fine detection method outperforms other benchmarks in almost all the evaluation criteria, providing clarification and support for tasks such as cancer screenings.
Mitosis Detection, Fast and Slow: Robust and Efficient Detection of Mitotic Figures
Authors: Mostafa Jahanifar, Adam Shephard, Neda Zamanitajeddin, Simon Graham, Shan E Ahmed Raza, Fayyaz Minhas, Nasir Rajpoot
Date: 2022-08-26 00:00:00
Tasks: Domain Generalization, Mitosis Detection, whole slide images

Counting of mitotic figures is a fundamental step in grading and prognostication of several cancers. However, manual mitosis counting is tedious and time-consuming. In addition, variation in the appearance of mitotic figures causes a high degree of discordance among pathologists. With advances in deep learning models, several automatic mitosis detection algorithms have been proposed but they are sensitive to {\em domain shift} often seen in histology images. We propose a robust and efficient two-stage mitosis detection framework, which comprises mitosis candidate segmentation ({\em Detecting Fast}) and candidate refinement ({\em Detecting Slow}) stages. The proposed candidate segmentation model, termed \textit{EUNet}, is fast and accurate due to its architectural design. EUNet can precisely segment candidates at a lower resolution to considerably speed up candidate detection. Candidates are then refined using a deeper classifier network, EfficientNet-B7, in the second stage. We make sure both stages are robust against domain shift by incorporating domain generalization methods. We demonstrate state-of-the-art performance and generalizability of the proposed model on the three largest publicly available mitosis datasets, winning the two mitosis domain generalization challenge contests (MIDOG21 and MIDOG22). Finally, we showcase the utility of the proposed algorithm by processing the TCGA breast cancer cohort (1,125 whole-slide images) to generate and release a repository of more than 620K mitotic figures.
Efficient LiDAR Point Cloud Geometry Compression Through Neighborhood Point Attention
Authors: Ruixiang Xue, Jianqiang Wang, Zhan Ma
Date: 2022-08-26 00:00:00

Although convolutional representation of multiscale sparse tensor demonstrated its superior efficiency to accurately model the occupancy probability for the compression of geometry component of dense object point clouds, its capacity for representing sparse LiDAR point cloud geometry (PCG) was largely limited. This is because 1) fixed receptive field of the convolution cannot characterize extremely and unevenly distributed sparse LiDAR points very well; and 2) pretrained convolutions with fixed weights are insufficient to dynamically capture information conditioned on the input. This work therefore suggests the neighborhood point attention (NPA) to tackle them, where we first use k nearest neighbors (kNN) to construct adaptive local neighborhood; and then leverage the self-attention mechanism to dynamically aggregate information within this neighborhood. Such NPA is devised as a NPAFormer to best exploit cross-scale and same-scale correlations for geometric occupancy probability estimation. Compared with the anchor using standardized G-PCC, our method provides >17% BD-rate gains for lossy compression, and >14% bitrate reduction for lossless scenario using popular LiDAR point clouds in SemanticKITTI and Ford datasets. Compared with the state-of-the-art (SOTA) solution using attention optimized octree coding method, our approach requires much less decoding runtime with about 640 times speedup on average, while still presenting better compression efficiency.
Training and Tuning Generative Neural Radiance Fields for Attribute-Conditional 3D-Aware Face Generation
Authors: Jichao Zhang, Aliaksandr Siarohin, Yahui Liu, Hao Tang, Nicu Sebe, Wei Wang
Date: 2022-08-26 00:00:00
Tasks: Attribute, Disentanglement, Face Generation, Face Model, Image Generation

Generative Neural Radiance Fields (GNeRF)-based 3D-aware GANs have showcased remarkable prowess in crafting high-fidelity images while upholding robust 3D consistency, particularly face generation. However, specific existing models prioritize view consistency over disentanglement, leading to constrained semantic or attribute control during the generation process. While many methods have explored incorporating semantic masks or leveraging 3D Morphable Models (3DMM) priors to imbue models with semantic control, these methods often demand training from scratch, entailing significant computational overhead. In this paper, we propose a novel approach: a conditional GNeRF model that integrates specific attribute labels as input, thus amplifying the controllability and disentanglement capabilities of 3D-aware generative models. Our approach builds upon a pre-trained 3D-aware face model, and we introduce a Training as Init and Optimizing for Tuning (TRIOT) method to train a conditional normalized flow module to enable the facial attribute editing, then optimize the latent vector to improve attribute-editing precision further. Our extensive experiments substantiate the efficacy of our model, showcasing its ability to generate high-quality edits with enhanced view consistency while safeguarding non-target regions. The code for our model is publicly available at https://github.com/zhangqianhui/TT-GNeRF.
MORI-RAN: Multi-view Robust Representation Learning via Hybrid Contrastive Fusion
Authors: Guanzhou Ke, Yongqi Zhu, Yang Yu
Date: 2022-08-26 00:00:00
Tasks: Clustering, Representation Learning, Specificity

Multi-view representation learning is essential for many multi-view tasks, such as clustering and classification. However, there are two challenging problems plaguing the community: i)how to learn robust multi-view representation from mass unlabeled data and ii) how to balance the view consistency and the view specificity. To this end, in this paper, we proposed a hybrid contrastive fusion algorithm to extract robust view-common representation from unlabeled data. Specifically, we found that introducing an additional representation space and aligning representations on this space enables the model to learn robust view-common representations. At the same time, we designed an asymmetric contrastive strategy to ensure that the model does not obtain trivial solutions. Experimental results demonstrated that the proposed method outperforms 12 competitive multi-view methods on four real-world datasets in terms of clustering and classification. Our source code will be available soon at \url{https://github.com/guanzhou-ke/mori-ran}.
Unsupervised Spike Depth Estimation via Cross-modality Cross-domain Knowledge Transfer
Authors: Jiaming Liu, Qizhe Zhang, Xiaoqi Li, Jianing Li, Guanqun Wang, Ming Lu, Tiejun Huang, Shanghang Zhang
Date: 2022-08-26 00:00:00
Tasks: Autonomous Driving, Depth Estimation, Knowledge Distillation, Transfer Learning

Neuromorphic spike data, an upcoming modality with high temporal resolution, has shown promising potential in autonomous driving by mitigating the challenges posed by high-velocity motion blur. However, training the spike depth estimation network holds significant challenges in two aspects: sparse spatial information for pixel-wise tasks and difficulties in achieving paired depth labels for temporally intensive spike streams. Therefore, we introduce open-source RGB data to support spike depth estimation, leveraging its annotations and spatial information. The inherent differences in modalities and data distribution make it challenging to directly apply transfer learning from open-source RGB to target spike data. To this end, we propose a cross-modality cross-domain (BiCross) framework to realize unsupervised spike depth estimation by introducing simulated mediate source spike data. Specifically, we design a Coarse-to-Fine Knowledge Distillation (CFKD) approach to facilitate comprehensive cross-modality knowledge transfer while preserving the unique strengths of both modalities, utilizing a spike-oriented uncertainty scheme. Then, we propose a Self-Correcting Teacher-Student (SCTS) mechanism to screen out reliable pixel-wise pseudo labels and ease the domain shift of the student model, which avoids error accumulation in target spike data. To verify the effectiveness of BiCross, we conduct extensive experiments on four scenarios, including Synthetic to Real, Extreme Weather, Scene Changing, and Real Spike. Our method achieves state-of-the-art (SOTA) performances, compared with RGB-oriented unsupervised depth estimation methods. Code and dataset: https://github.com/Theia-4869/BiCross
Cross-Lingual Cross-Modal Retrieval with Noise-Robust Learning
Authors: Yabing Wang, Jianfeng Dong, Tianxiang Liang, Minsong Zhang, Rui Cai, Xun Wang
Date: 2022-08-26 00:00:00
Tasks: Cross-Modal Retrieval, Machine Translation, Retrieval, Sentence, Translation

Despite the recent developments in the field of cross-modal retrieval, there has been less research focusing on low-resource languages due to the lack of manually annotated datasets. In this paper, we propose a noise-robust cross-lingual cross-modal retrieval method for low-resource languages. To this end, we use Machine Translation (MT) to construct pseudo-parallel sentence pairs for low-resource languages. However, as MT is not perfect, it tends to introduce noise during translation, rendering textual embeddings corrupted and thereby compromising the retrieval performance. To alleviate this, we introduce a multi-view self-distillation method to learn noise-robust target-language representations, which employs a cross-attention module to generate soft pseudo-targets to provide direct supervision from the similarity-based view and feature-based view. Besides, inspired by the back-translation in unsupervised MT, we minimize the semantic discrepancies between origin sentences and back-translated sentences to further improve the noise robustness of the textual encoder. Extensive experiments are conducted on three video-text and image-text cross-modal retrieval benchmarks across different languages, and the results demonstrate that our method significantly improves the overall performance without using extra human-labeled data. In addition, equipped with a pre-trained visual encoder from a recent vision-and-language pre-training framework, i.e., CLIP, our model achieves a significant performance gain, showing that our method is compatible with popular pre-training models. Code and data are available at https://github.com/HuiGuanLab/nrccr.
Perspective-1-Ellipsoid: Formulation, Analysis and Solutions of the Camera Pose Estimation Problem from One Ellipse-Ellipsoid Correspondence
Authors: Vincent Gaudillière, Gilles Simon, Marie-Odile Berger
Date: 2022-08-26 00:00:00
Tasks: Camera Pose Estimation, Pose Estimation, Specificity

In computer vision, camera pose estimation from correspondences between 3D geometric entities and their projections into the image has been a widely investigated problem. Although most state-of-the-art methods exploit low-level primitives such as points or lines, the emergence of very effective CNN-based object detectors in the recent years has paved the way to the use of higher-level features carrying semantically meaningful information. Pioneering works in that direction have shown that modelling 3D objects by ellipsoids and 2D detections by ellipses offers a convenient manner to link 2D and 3D data. However, the mathematical formalism most often used in the related litterature does not enable to easily distinguish ellipsoids and ellipses from other quadrics and conics, leading to a loss of specificity potentially detrimental in some developments. Moreover, the linearization process of the projection equation creates an over-representation of the camera parameters, also possibly causing an efficiency loss. In this paper, we therefore introduce an ellipsoid-specific theoretical framework and demonstrate its beneficial properties in the context of pose estimation. More precisely, we first show that the proposed formalism enables to reduce the pose estimation problem to a position or orientation-only estimation problem in which the remaining unknowns can be derived in closed-form. Then, we demonstrate that it can be further reduced to a 1 Degree-of-Freedom (1DoF) problem and provide the analytical derivations of the pose as a function of that unique scalar unknown. We illustrate our theoretical considerations by visual examples and include a discussion on the practical aspects. Finally, we release this paper along with the corresponding source code in order to contribute towards more efficient resolutions of ellipsoid-related pose estimation problems.
Partially Relevant Video Retrieval
Authors: Jianfeng Dong, Xianke Chen, Minsong Zhang, Xun Yang, ShuJie Chen, Xirong Li, Xun Wang
Date: 2022-08-26 00:00:00
Tasks: Moment Retrieval, Multiple Instance Learning, Partially Relevant Video Retrieval, Retrieval, Text to Video Retrieval, Video Captioning, Video Corpus Moment Retrieval, Video Retrieval

Current methods for text-to-video retrieval (T2VR) are trained and tested on video-captioning oriented datasets such as MSVD, MSR-VTT and VATEX. A key property of these datasets is that videos are assumed to be temporally pre-trimmed with short duration, whilst the provided captions well describe the gist of the video content. Consequently, for a given paired video and caption, the video is supposed to be fully relevant to the caption. In reality, however, as queries are not known a priori, pre-trimmed video clips may not contain sufficient content to fully meet the query. This suggests a gap between the literature and the real world. To fill the gap, we propose in this paper a novel T2VR subtask termed Partially Relevant Video Retrieval (PRVR). An untrimmed video is considered to be partially relevant w.r.t. a given textual query if it contains a moment relevant to the query. PRVR aims to retrieve such partially relevant videos from a large collection of untrimmed videos. PRVR differs from single video moment retrieval and video corpus moment retrieval, as the latter two are to retrieve moments rather than untrimmed videos. We formulate PRVR as a multiple instance learning (MIL) problem, where a video is simultaneously viewed as a bag of video clips and a bag of video frames. Clips and frames represent video content at different time scales. We propose a Multi-Scale Similarity Learning (MS-SL) network that jointly learns clip-scale and frame-scale similarities for PRVR. Extensive experiments on three datasets (TVR, ActivityNet Captions, and Charades-STA) demonstrate the viability of the proposed method. We also show that our method can be used for improving video corpus moment retrieval.
EGFR Mutation Prediction of Lung Biopsy Images using Deep Learning
Authors: Ravi Kant Gupta, Shivani Nandgaonkar, Nikhil Cherian Kurian, Swapnil Rane, Amit Sethi
Date: 2022-08-26 00:00:00
Tasks: Deep Learning, Diagnostic, whole slide images

The standard diagnostic procedures for targeted therapies in lung cancer treatment involve histological subtyping and subsequent detection of key driver mutations, such as EGFR. Even though molecular profiling can uncover the driver mutation, the process is often expensive and time-consuming. Deep learning-oriented image analysis offers a more economical alternative for discovering driver mutations directly from whole slide images (WSIs). In this work, we used customized deep learning pipelines with weak supervision to identify the morphological correlates of EGFR mutation from hematoxylin and eosin-stained WSIs, in addition to detecting tumor and histologically subtyping it. We demonstrate the effectiveness of our pipeline by conducting rigorous experiments and ablation studies on two lung cancer datasets - TCGA and a private dataset from India. With our pipeline, we achieved an average area under the curve (AUC) of 0.964 for tumor detection, and 0.942 for histological subtyping between adenocarcinoma and squamous cell carcinoma on the TCGA dataset. For EGFR detection, we achieved an average AUC of 0.864 on the TCGA dataset and 0.783 on the dataset from India. Our key learning points include the following. Firstly, there is no particular advantage of using a feature extractor layers trained on histology, if one is going to fine-tune the feature extractor on the target dataset. Secondly, selecting patches with high cellularity, presumably capturing tumor regions, is not always helpful, as the sign of a disease class may be present in the tumor-adjacent stroma.
AiM: Taking Answers in Mind to Correct Chinese Cloze Tests in Educational Applications
Authors: Yusen Zhang, Zhongli Li, Qingyu Zhou, Ziyi Liu, Chao Li, Mina Ma, Yunbo Cao, Hongzhi Liu
Date: 2022-08-26 00:00:00
Proceeding: COLING 2022 10
Tasks: Optical Character Recognition (OCR)

To automatically correct handwritten assignments, the traditional approach is to use an OCR model to recognize characters and compare them to answers. The OCR model easily gets confused on recognizing handwritten Chinese characters, and the textual information of the answers is missing during the model inference. However, teachers always have these answers in mind to review and correct assignments. In this paper, we focus on the Chinese cloze tests correction and propose a multimodal approach (named AiM). The encoded representations of answers interact with the visual information of students' handwriting. Instead of predicting 'right' or 'wrong', we perform the sequence labeling on the answer text to infer which answer character differs from the handwritten content in a fine-grained way. We take samples of OCR datasets as the positive samples for this task, and develop a negative sample augmentation method to scale up the training data. Experimental results show that AiM outperforms OCR-based methods by a large margin. Extensive studies demonstrate the effectiveness of our multimodal approach.
Deformation equivariant cross-modality image synthesis with paired non-aligned training data
Authors: Joel Honkamaa, Umair Khan, Sonja Koivukoski, Mira Valkonen, Leena Latonen, Pekka Ruusuvuori, Pekka Marttinen
Date: 2022-08-26 00:00:00
Tasks: Image Generation

Cross-modality image synthesis is an active research topic with multiple medical clinically relevant applications. Recently, methods allowing training with paired but misaligned data have started to emerge. However, no robust and well-performing methods applicable to a wide range of real world data sets exist. In this work, we propose a generic solution to the problem of cross-modality image synthesis with paired but non-aligned data by introducing new deformation equivariance encouraging loss functions. The method consists of joint training of an image synthesis network together with separate registration networks and allows adversarial training conditioned on the input even with misaligned data. The work lowers the bar for new clinical applications by allowing effortless training of cross-modality image synthesis networks for more difficult data sets.
GHN-Q: Parameter Prediction for Unseen Quantized Convolutional Architectures via Graph Hypernetworks
Authors: Stone Yun, Alexander Wong
Date: 2022-08-26 00:00:00
Tasks: Adversarial Robustness, Parameter Prediction, Quantization

Deep convolutional neural network (CNN) training via iterative optimization has had incredible success in finding optimal parameters. However, modern CNN architectures often contain millions of parameters. Thus, any given model for a single architecture resides in a massive parameter space. Models with similar loss could have drastically different characteristics such as adversarial robustness, generalizability, and quantization robustness. For deep learning on the edge, quantization robustness is often crucial. Finding a model that is quantization-robust can sometimes require significant efforts. Recent works using Graph Hypernetworks (GHN) have shown remarkable performance predicting high-performant parameters of varying CNN architectures. Inspired by these successes, we wonder if the graph representations of GHN-2 can be leveraged to predict quantization-robust parameters as well, which we call GHN-Q. We conduct the first-ever study exploring the use of graph hypernetworks for predicting parameters of unseen quantized CNN architectures. We focus on a reduced CNN search space and find that GHN-Q can in fact predict quantization-robust parameters for various 8-bit quantized CNNs. Decent quantized accuracies are observed even with 4-bit quantization despite GHN-Q not being trained on it. Quantized finetuning of GHN-Q at lower bitwidths may bring further improvements and is currently being explored.
Laplacian Pyramid-like Autoencoder
Authors: Sangjun Han, Taeil Hur, Youngmi Hur
Date: 2022-08-26 00:00:00
Tasks: Decoder, Super-Resolution

In this paper, we develop the Laplacian pyramid-like autoencoder (LPAE) by adding the Laplacian pyramid (LP) concept widely used to analyze images in Signal Processing. LPAE decomposes an image into the approximation image and the detail image in the encoder part and then tries to reconstruct the original image in the decoder part using the two components. We use LPAE for experiments on classifications and super-resolution areas. Using the detail image and the smaller-sized approximation image as inputs of a classification network, our LPAE makes the model lighter. Moreover, we show that the performance of the connected classification networks has remained substantially high. In a super-resolution area, we show that the decoder part gets a high-quality reconstruction image by setting to resemble the structure of LP. Consequently, LPAE improves the original results by combining the decoder part of the autoencoder and the super-resolution network.