pwc-archive/papers-with-abstracts huggingface dataset:
Multiple Instance Learning Framework with Masked Hard Instance Mining for Whole Slide Image Classification
Authors: Wenhao Tang, Sheng Huang, Xiaoxian Zhang, Fengtao Zhou, Yi Zhang, Bo Liu
Date: 2023-07-28 00:00:00
Proceeding: ICCV 2023 1
Tasks: image-classification, Image Classification, Multiple Instance Learning

The whole slide image (WSI) classification is often formulated as a multiple instance learning (MIL) problem. Since the positive tissue is only a small fraction of the gigapixel WSI, existing MIL methods intuitively focus on identifying salient instances via attention mechanisms. However, this leads to a bias towards easy-to-classify instances while neglecting hard-to-classify instances. Some literature has revealed that hard examples are beneficial for modeling a discriminative boundary accurately. By applying such an idea at the instance level, we elaborate a novel MIL framework with masked hard instance mining (MHIM-MIL), which uses a Siamese structure (Teacher-Student) with a consistency constraint to explore the potential hard instances. With several instance masking strategies based on attention scores, MHIM-MIL employs a momentum teacher to implicitly mine hard instances for training the student model, which can be any attention-based MIL model. This counter-intuitive strategy essentially enables the student to learn a better discriminating boundary. Moreover, the student is used to update the teacher with an exponential moving average (EMA), which in turn identifies new hard instances for subsequent training iterations and stabilizes the optimization. Experimental results on the CAMELYON-16 and TCGA Lung Cancer datasets demonstrate that MHIM-MIL outperforms other latest methods in terms of performance and training cost. The code is available at: https://github.com/DearCaat/MHIM-MIL.
A Practical Recipe for Federated Learning Under Statistical Heterogeneity Experimental Design
Authors: Mahdi Morafah, Weijia Wang, Bill Lin
Date: 2023-07-28 00:00:00
Tasks: Experimental Design, Federated Learning

Federated Learning (FL) has been an area of active research in recent years. There have been numerous studies in FL to make it more successful in the presence of data heterogeneity. However, despite the existence of many publications, the state of progress in the field is unknown. Many of the works use inconsistent experimental settings and there are no comprehensive studies on the effect of FL-specific experimental variables on the results and practical insights for a more comparable and consistent FL experimental setup. Furthermore, the existence of several benchmarks and confounding variables has further complicated the issue of inconsistency and ambiguity. In this work, we present the first comprehensive study on the effect of FL-specific experimental variables in relation to each other and performance results, bringing several insights and recommendations for designing a meaningful and well-incentivized FL experimental setup. We further aid the community by releasing FedZoo-Bench, an open-source library based on PyTorch with pre-implementation of 22 state-of-the-art methods, and a broad set of standardized and customizable features available at https://github.com/MMorafah/FedZoo-Bench. We also provide a comprehensive comparison of several state-of-the-art (SOTA) methods to better understand the current state of the field and existing limitations.
BOURNE: Bootstrapped Self-supervised Learning Framework for Unified Graph Anomaly Detection
Authors: Jie Liu, Mengting He, Xuequn Shang, Jieming Shi, Bin Cui, Hongzhi Yin
Date: 2023-07-28 00:00:00
Tasks: Anomaly Detection, CoLA, Contrastive Learning, Graph Anomaly Detection, Self-Supervised Learning

Graph anomaly detection (GAD) has gained increasing attention in recent years due to its critical application in a wide range of domains, such as social networks, financial risk management, and traffic analysis. Existing GAD methods can be categorized into node and edge anomaly detection models based on the type of graph objects being detected. However, these methods typically treat node and edge anomalies as separate tasks, overlooking their associations and frequent co-occurrences in real-world graphs. As a result, they fail to leverage the complementary information provided by node and edge anomalies for mutual detection. Additionally, state-of-the-art GAD methods, such as CoLA and SL-GAD, heavily rely on negative pair sampling in contrastive learning, which incurs high computational costs, hindering their scalability to large graphs. To address these limitations, we propose a novel unified graph anomaly detection framework based on bootstrapped self-supervised learning (named BOURNE). We extract a subgraph (graph view) centered on each target node as node context and transform it into a dual hypergraph (hypergraph view) as edge context. These views are encoded using graph and hypergraph neural networks to capture the representations of nodes, edges, and their associated contexts. By swapping the context embeddings between nodes and edges and measuring the agreement in the embedding space, we enable the mutual detection of node and edge anomalies. Furthermore, BOURNE can eliminate the need for negative sampling, thereby enhancing its efficiency in handling large graphs. Extensive experiments conducted on six benchmark datasets demonstrate the superior effectiveness and efficiency of BOURNE in detecting both node and edge anomalies.
Learning Multi-modal Representations by Watching Hundreds of Surgical Video Lectures
Authors: Kun Yuan, Vinkle Srivastav, Tong Yu, Joel L. Lavanchy, Jacques Marescaux, Pietro Mascagni, Nassir Navab, Nicolas Padoy
Date: 2023-07-27 00:00:00
Tasks: Automatic Speech Recognition, Contrastive Learning, Few-Shot Learning, Representation Learning, Retrieval, speech-recognition, Speech Recognition, Triplet, Video Captioning, Video Retrieval

Recent advancements in surgical computer vision applications have been driven by vision-only models, which do not explicitly integrate the rich semantics of language into their design. These methods rely on manually annotated surgical videos to predict a fixed set of object categories, limiting their generalizability to unseen surgical procedures and downstream tasks. In this work, we put forward the idea that the surgical video lectures available through open surgical e-learning platforms can provide effective vision and language supervisory signals for multi-modal representation learning without relying on manual annotations. We address the surgery-specific linguistic challenges present in surgical video lectures by employing multiple complementary automatic speech recognition systems to generate text transcriptions. We then present a novel method, SurgVLP - Surgical Vision Language Pre-training, for multi-modal representation learning. Extensive experiments across diverse surgical procedures and tasks demonstrate that the multi-modal representations learned by SurgVLP exhibit strong transferability and adaptability in surgical video analysis. Furthermore, our zero-shot evaluations highlight SurgVLP's potential as a general-purpose foundation model for surgical workflow analysis, reducing the reliance on extensive manual annotations for downstream tasks, and facilitating adaptation methods such as few-shot learning to build a scalable and data-efficient solution for various downstream surgical applications. The [training code](https://github.com/CAMMA-public/SurgVLP) and [weights](https://github.com/CAMMA-public/PeskaVLP) are public.
Reachability Poorman Discrete-Bidding Games
Authors: Guy Avni, Tobias Meggendorfer, Suman Sadhukhan, Josef Tkadlec, Đorđe Žikelić
Date: 2023-07-27 00:00:00

We consider {\em bidding games}, a class of two-player zero-sum {\em graph games}. The game proceeds as follows. Both players have bounded budgets. A token is placed on a vertex of a graph, in each turn the players simultaneously submit bids, and the higher bidder moves the token, where we break bidding ties in favor of Player 1. Player 1 wins the game iff the token visits a designated target vertex. We consider, for the first time, {\em poorman discrete-bidding} in which the granularity of the bids is restricted and the higher bid is paid to the bank. Previous work either did not impose granularity restrictions or considered {\em Richman} bidding (bids are paid to the opponent). While the latter mechanisms are technically more accessible, the former is more appealing from a practical standpoint. Our study focuses on {\em threshold budgets}, which is the necessary and sufficient initial budget required for Player 1 to ensure winning against a given Player 2 budget. We first show existence of thresholds. In DAGs, we show that threshold budgets can be approximated with error bounds by thresholds under continuous-bidding and that they exhibit a periodic behavior. We identify closed-form solutions in special cases. We implement and experiment with an algorithm to find threshold budgets.
Open Problems and Fundamental Limitations of Reinforcement Learning from Human Feedback
Authors: Stephen Casper, Xander Davies, Claudia Shi, Thomas Krendl Gilbert, Jérémy Scheurer, Javier Rando, Rachel Freedman, Tomasz Korbak, David Lindner, Pedro Freire, Tony Wang, Samuel Marks, Charbel-Raphaël Segerie, Micah Carroll, Andi Peng, Phillip Christoffersen, Mehul Damani, Stewart Slocum, Usman Anwar, Anand Siththaranjan, Max Nadeau, Eric J. Michaud, Jacob Pfau, Dmitrii Krasheninnikov, Xin Chen, Lauro Langosco, Peter Hase, Erdem Biyik, Anca Dragan, David Krueger, Dorsa Sadigh, Dylan Hadfield-Menell
Date: 2023-07-27 00:00:00
Tasks: reinforcement-learning

Reinforcement learning from human feedback (RLHF) is a technique for training AI systems to align with human goals. RLHF has emerged as the central method used to finetune state-of-the-art large language models (LLMs). Despite this popularity, there has been relatively little public work systematizing its flaws. In this paper, we (1) survey open problems and fundamental limitations of RLHF and related methods; (2) overview techniques to understand, improve, and complement RLHF in practice; and (3) propose auditing and disclosure standards to improve societal oversight of RLHF systems. Our work emphasizes the limitations of RLHF and highlights the importance of a multi-faceted approach to the development of safer AI systems.
PromptStyler: Prompt-driven Style Generation for Source-free Domain Generalization
Authors: Junhyeong Cho, Gilhyun Nam, Sungyeon Kim, Hunmin Yang, Suha Kwak
Date: 2023-07-27 00:00:00
Proceeding: ICCV 2023 1
Tasks: Domain Generalization, Image Classification, Multi-modal Classification, Multimodal Deep Learning, Out-of-Distribution Generalization, Source-free Domain Generalization, Zero-Shot Image Classification, Zero-Shot Learning

In a joint vision-language space, a text feature (e.g., from "a photo of a dog") could effectively represent its relevant image features (e.g., from dog photos). Also, a recent study has demonstrated the cross-modal transferability phenomenon of this joint space. From these observations, we propose PromptStyler which simulates various distribution shifts in the joint space by synthesizing diverse styles via prompts without using any images to deal with source-free domain generalization. The proposed method learns to generate a variety of style features (from "a S* style of a") via learnable style word vectors for pseudo-words S*. To ensure that learned styles do not distort content information, we force style-content features (from "a S* style of a [class]") to be located nearby their corresponding content features (from "[class]") in the joint vision-language space. After learning style word vectors, we train a linear classifier using synthesized style-content features. PromptStyler achieves the state of the art on PACS, VLCS, OfficeHome and DomainNet, even though it does not require any images for training.
One-shot Joint Extraction, Registration and Segmentation of Neuroimaging Data
Authors: Yao Su, Zhentian Qian, Lei Ma, Lifang He, Xiangnan Kong
Date: 2023-07-27 00:00:00
Tasks: Brain Image Segmentation, Image Registration, Image Segmentation, Medical Image Registration, Medical Image Segmentation, One-Shot Learning, Segmentation

Brain extraction, registration and segmentation are indispensable preprocessing steps in neuroimaging studies. The aim is to extract the brain from raw imaging scans (i.e., extraction step), align it with a target brain image (i.e., registration step) and label the anatomical brain regions (i.e., segmentation step). Conventional studies typically focus on developing separate methods for the extraction, registration and segmentation tasks in a supervised setting. The performance of these methods is largely contingent on the quantity of training samples and the extent of visual inspections carried out by experts for error correction. Nevertheless, collecting voxel-level labels and performing manual quality control on high-dimensional neuroimages (e.g., 3D MRI) are expensive and time-consuming in many medical studies. In this paper, we study the problem of one-shot joint extraction, registration and segmentation in neuroimaging data, which exploits only one labeled template image (a.k.a. atlas) and a few unlabeled raw images for training. We propose a unified end-to-end framework, called JERS, to jointly optimize the extraction, registration and segmentation tasks, allowing feedback among them. Specifically, we use a group of extraction, registration and segmentation modules to learn the extraction mask, transformation and segmentation mask, where modules are interconnected and mutually reinforced by self-supervision. Empirical results on real-world datasets demonstrate that our proposed method performs exceptionally in the extraction, registration and segmentation tasks. Our code and data can be found at https://github.com/Anonymous4545/JERS
Learning in Repeated Multi-Unit Pay-As-Bid Auctions
Authors: Rigel Galgana, Negin Golrezaei
Date: 2023-07-27 00:00:00

Motivated by Carbon Emissions Trading Schemes, Treasury Auctions, Procurement Auctions, and Wholesale Electricity Markets, which all involve the auctioning of homogeneous multiple units, we consider the problem of learning how to bid in repeated multi-unit pay-as-bid auctions. In each of these auctions, a large number of (identical) items are to be allocated to the largest submitted bids, where the price of each of the winning bids is equal to the bid itself. In this work, we study the problem of optimizing bidding strategies from the perspective of a single bidder. Effective bidding in pay-as-bid (PAB) auctions is complex due to the combinatorial nature of the action space. We show that a utility decoupling trick enables a polynomial time algorithm to solve the offline problem where competing bids are known in advance. Leveraging this structure, we design efficient algorithms for the online problem under both full information and bandit feedback settings that achieve an upper bound on regret of $O(M \sqrt{T \log T})$ and $O(M T^{\frac{2}{3}} \sqrt{\log T})$ respectively, where $M$ is the number of units demanded by the bidder and $T$ is the total number of auctions. We accompany these results with a regret lower bound of $\Omega(M\sqrt{T})$ for the full information setting and $\Omega (M^{2/3}T^{2/3})$ for the bandit setting. We also present additional findings on the characterization of PAB equilibria. While the Nash equilibria of PAB auctions possess nice properties such as winning bid uniformity and high welfare \& revenue, they are not guaranteed under no regret learning dynamics. Nevertheless, our simulations suggest these properties hold anyways, regardless of Nash equilibrium existence. Compared to its uniform price counterpart, the PAB dynamics converge faster and achieve higher revenue, making PAB appealing whenever revenue holds significant social value.
Med-Flamingo: a Multimodal Medical Few-shot Learner
Authors: Michael Moor, Qian Huang, Shirley Wu, Michihiro Yasunaga, Cyril Zakka, Yash Dalmia, Eduardo Pontes Reis, Pranav Rajpurkar, Jure Leskovec
Date: 2023-07-27 00:00:00
Tasks: Medical Visual Question Answering, Question Answering, Visual Question Answering, Visual Question Answering (VQA)

Medicine, by its nature, is a multifaceted domain that requires the synthesis of information across various modalities. Medical generative vision-language models (VLMs) make a first step in this direction and promise many exciting clinical applications. However, existing models typically have to be fine-tuned on sizeable down-stream datasets, which poses a significant limitation as in many medical applications data is scarce, necessitating models that are capable of learning from few examples in real-time. Here we propose Med-Flamingo, a multimodal few-shot learner adapted to the medical domain. Based on OpenFlamingo-9B, we continue pre-training on paired and interleaved medical image-text data from publications and textbooks. Med-Flamingo unlocks few-shot generative medical visual question answering (VQA) abilities, which we evaluate on several datasets including a novel challenging open-ended VQA dataset of visual USMLE-style problems. Furthermore, we conduct the first human evaluation for generative medical VQA where physicians review the problems and blinded generations in an interactive app. Med-Flamingo improves performance in generative medical VQA by up to 20\% in clinician's rating and firstly enables multimodal medical few-shot adaptations, such as rationale generation. We release our model, code, and evaluation app under https://github.com/snap-stanford/med-flamingo.
RCT Rejection Sampling for Causal Estimation Evaluation
Authors: Katherine A. Keith, Sergey Feldman, David Jurgens, Jonathan Bragg, Rohit Bhattacharya
Date: 2023-07-27 00:00:00
Tasks: Causal Identification

Confounding is a significant obstacle to unbiased estimation of causal effects from observational data. For settings with high-dimensional covariates -- such as text data, genomics, or the behavioral social sciences -- researchers have proposed methods to adjust for confounding by adapting machine learning methods to the goal of causal estimation. However, empirical evaluation of these adjustment methods has been challenging and limited. In this work, we build on a promising empirical evaluation strategy that simplifies evaluation design and uses real data: subsampling randomized controlled trials (RCTs) to create confounded observational datasets while using the average causal effects from the RCTs as ground-truth. We contribute a new sampling algorithm, which we call RCT rejection sampling, and provide theoretical guarantees that causal identification holds in the observational data to allow for valid comparisons to the ground-truth RCT. Using synthetic data, we show our algorithm indeed results in low bias when oracle estimators are evaluated on the confounded samples, which is not always the case for a previously proposed algorithm. In addition to this identification result, we highlight several finite data considerations for evaluation designers who plan to use RCT rejection sampling on their own datasets. As a proof of concept, we implement an example evaluation pipeline and walk through these finite data considerations with a novel, real-world RCT -- which we release publicly -- consisting of approximately 70k observations and text data as high-dimensional covariates. Together, these contributions build towards a broader agenda of improved empirical evaluation for causal estimation.
VISU at WASSA 2023 Shared Task: Detecting Emotions in Reaction to News Stories Leveraging BERT and Stacked Embeddings
Authors: Vivek Kumar, Sushmita Singh, Prayag Tiwari
Date: 2023-07-27 00:00:00
Tasks: Articles, Emotion Classification, Visu

Our system, VISU, participated in the WASSA 2023 Shared Task (3) of Emotion Classification from essays written in reaction to news articles. Emotion detection from complex dialogues is challenging and often requires context/domain understanding. Therefore in this research, we have focused on developing deep learning (DL) models using the combination of word embedding representations with tailored prepossessing strategies to capture the nuances of emotions expressed. Our experiments used static and contextual embeddings (individual and stacked) with Bidirectional Long short-term memory (BiLSTM) and Transformer based models. We occupied rank tenth in the emotion detection task by scoring a Macro F1-Score of 0.2717, validating the efficacy of our implemented approaches for small and imbalanced datasets with mixed categories of target emotions.
Cortex Inspired Learning to Recover Damaged Signal Modality with ReD-SOM Model
Authors: Artem Muliukov, Laurent Rodriguez, Benoit Miramond
Date: 2023-07-27 00:00:00

Recent progress in the fields of AI and cognitive sciences opens up new challenges that were previously inaccessible to study. One of such modern tasks is recovering lost data of one modality by using the data from another one. A similar effect (called the McGurk Effect) has been found in the functioning of the human brain. Observing this effect, one modality of information interferes with another, changing its perception. In this paper, we propose a way to simulate such an effect and use it to reconstruct lost data modalities by combining Variational Auto-Encoders, Self-Organizing Maps, and Hebb connections in a unified ReD-SOM (Reentering Deep Self-organizing Map) model. We are inspired by human's capability to use different zones of the brain in different modalities, in case of having a lack of information in one of the modalities. This new approach not only improves the analysis of ambiguous data but also restores the intended signal! The results obtained on the multimodal dataset demonstrate an increase of quality of the signal reconstruction. The effect is remarkable both visually and quantitatively, specifically in presence of a significant degree of signal's distortion.
A Survey on Reservoir Computing and its Interdisciplinary Applications Beyond Traditional Machine Learning
Authors: Heng Zhang, Danilo Vasconcellos Vargas
Date: 2023-07-27 00:00:00

Reservoir computing (RC), first applied to temporal signal processing, is a recurrent neural network in which neurons are randomly connected. Once initialized, the connection strengths remain unchanged. Such a simple structure turns RC into a non-linear dynamical system that maps low-dimensional inputs into a high-dimensional space. The model's rich dynamics, linear separability, and memory capacity then enable a simple linear readout to generate adequate responses for various applications. RC spans areas far beyond machine learning, since it has been shown that the complex dynamics can be realized in various physical hardware implementations and biological devices. This yields greater flexibility and shorter computation time. Moreover, the neuronal responses triggered by the model's dynamics shed light on understanding brain mechanisms that also exploit similar dynamical processes. While the literature on RC is vast and fragmented, here we conduct a unified review of RC's recent developments from machine learning to physics, biology, and neuroscience. We first review the early RC models, and then survey the state-of-the-art models and their applications. We further introduce studies on modeling the brain's mechanisms by RC. Finally, we offer new perspectives on RC development, including reservoir design, coding frameworks unification, physical RC implementations, and interaction between RC, cognitive neuroscience and evolution.
Understanding Forward Process of Convolutional Neural Network
Authors: Peixin Tian
Date: 2023-07-27 00:00:00

This paper reveal the selective rotation in the CNNs' forward processing. It elucidates the activation function as a discerning mechanism that unifies and quantizes the rotational aspects of the input data. Experiments show how this defined methodology reflects the progress network distinguish inputs based on statistical indicators, which can be comprehended or analyzed by applying structured mathematical tools. Our findings also unveil the consistency between artificial neural networks and the human brain in their data processing pattern.