pwc-archive/papers-with-abstracts huggingface dataset:
Topic-Level Bayesian Surprise and Serendipity for Recommender Systems
Authors: Tonmoy Hasan, Razvan Bunescu
Date: 2023-08-11 00:00:00
Tasks: Collaborative Filtering, Recommendation Systems

A recommender system that optimizes its recommendations solely to fit a user's history of ratings for consumed items can create a filter bubble, wherein the user does not get to experience items from novel, unseen categories. One approach to mitigate this undesired behavior is to recommend items with high potential for serendipity, namely surprising items that are likely to be highly rated. In this paper, we propose a content-based formulation of serendipity that is rooted in Bayesian surprise and use it to measure the serendipity of items after they are consumed and rated by the user. When coupled with a collaborative-filtering component that identifies similar users, this enables recommending items with high potential for serendipity. To facilitate the evaluation of topic-level models for surprise and serendipity, we introduce a dataset of book reading histories extracted from Goodreads, containing over 26 thousand users and close to 1.3 million books, where we manually annotate 449 books read by 4 users in terms of their time-dependent, topic-level surprise. Experimental evaluations show that models that use Bayesian surprise correlate much better with the manual annotations of topic-level surprise than distance-based heuristics, and also obtain better serendipitous item recommendation performance.
Large Language Models to Identify Social Determinants of Health in Electronic Health Records
Authors: Marco Guevara, Shan Chen, Spencer Thomas, Tafadzwa L. Chaunzwa, Idalid Franco, Benjamin Kann, Shalini Moningi, Jack Qian, Madeleine Goldstein, Susan Harper, Hugo JWL Aerts, Guergana K. Savova, Raymond H. Mak, Danielle S. Bitterman
Date: 2023-08-11 00:00:00
Tasks: Adversarial Robustness, Ethics, Text Classification

Social determinants of health (SDoH) have an important impact on patient outcomes but are incompletely collected from the electronic health records (EHR). This study researched the ability of large language models to extract SDoH from free text in EHRs, where they are most commonly documented, and explored the role of synthetic clinical text for improving the extraction of these scarcely documented, yet extremely valuable, clinical data. 800 patient notes were annotated for SDoH categories, and several transformer-based models were evaluated. The study also experimented with synthetic data generation and assessed for algorithmic bias. Our best-performing models were fine-tuned Flan-T5 XL (macro-F1 0.71) for any SDoH, and Flan-T5 XXL (macro-F1 0.70). The benefit of augmenting fine-tuning with synthetic data varied across model architecture and size, with smaller Flan-T5 models (base and large) showing the greatest improvements in performance (delta F1 +0.12 to +0.23). Model performance was similar on the in-hospital system dataset but worse on the MIMIC-III dataset. Our best-performing fine-tuned models outperformed zero- and few-shot performance of ChatGPT-family models for both tasks. These fine-tuned models were less likely than ChatGPT to change their prediction when race/ethnicity and gender descriptors were added to the text, suggesting less algorithmic bias (p<0.05). At the patient-level, our models identified 93.8% of patients with adverse SDoH, while ICD-10 codes captured 2.0%. Our method can effectively extracted SDoH information from clinic notes, performing better compare to GPT zero- and few-shot settings. These models could enhance real-world evidence on SDoH and aid in identifying patients needing social support.
Combining feature aggregation and geometric similarity for re-identification of patterned animals
Authors: Veikka Immonen, Ekaterina Nepovinnykh, Tuomas Eerola, Charles V. Stewart, Heikki Kälviäinen
Date: 2023-08-11 00:00:00

Image-based re-identification of animal individuals allows gathering of information such as migration patterns of the animals over time. This, together with large image volumes collected using camera traps and crowdsourcing, opens novel possibilities to study animal populations. For many species, the re-identification can be done by analyzing the permanent fur, feather, or skin patterns that are unique to each individual. In this paper, we address the re-identification by combining two types of pattern similarity metrics: 1) pattern appearance similarity obtained by pattern feature aggregation and 2) geometric pattern similarity obtained by analyzing the geometric consistency of pattern similarities. The proposed combination allows to efficiently utilize both the local and global pattern features, providing a general re-identification approach that can be applied to a wide variety of different pattern types. In the experimental part of the work, we demonstrate that the method achieves promising re-identification accuracies for Saimaa ringed seals and whale sharks.
Defensive Perception: Estimation and Monitoring of Neural Network Performance under Deployment
Authors: Hendrik Vogt, Stefan Buehler, Mark Schutera
Date: 2023-08-11 00:00:00
Tasks: Autonomous Driving, Autonomous Vehicles, Semantic Segmentation

In this paper, we propose a method for addressing the issue of unnoticed catastrophic deployment and domain shift in neural networks for semantic segmentation in autonomous driving. Our approach is based on the idea that deep learning-based perception for autonomous driving is uncertain and best represented as a probability distribution. As autonomous vehicles' safety is paramount, it is crucial for perception systems to recognize when the vehicle is leaving its operational design domain, anticipate hazardous uncertainty, and reduce the performance of the perception system. To address this, we propose to encapsulate the neural network under deployment within an uncertainty estimation envelope that is based on the epistemic uncertainty estimation through the Monte Carlo Dropout approach. This approach does not require modification of the deployed neural network and guarantees expected model performance. Our defensive perception envelope has the capability to estimate a neural network's performance, enabling monitoring and notification of entering domains of reduced neural network performance under deployment. Furthermore, our envelope is extended by novel methods to improve the application in deployment settings, including reducing compute expenses and confining estimation noise. Finally, we demonstrate the applicability of our method for multiple different potential deployment shifts relevant to autonomous driving, such as transitions into the night, rainy, or snowy domain. Overall, our approach shows great potential for application in deployment settings and enables operational design domain recognition via uncertainty, which allows for defensive perception, safe state triggers, warning notifications, and feedback for testing or development and adaptation of the perception stack.
Enhancing Phenotype Recognition in Clinical Notes Using Large Language Models: PhenoBCBERT and PhenoGPT
Authors: Jingye Yang, Cong Liu, Wendy Deng, Da Wu, Chunhua Weng, Yunyun Zhou, Kai Wang
Date: 2023-08-11 00:00:00
Tasks: Negation

We hypothesize that large language models (LLMs) based on the transformer architecture can enable automated detection of clinical phenotype terms, including terms not documented in the HPO. In this study, we developed two types of models: PhenoBCBERT, a BERT-based model, utilizing Bio+Clinical BERT as its pre-trained model, and PhenoGPT, a GPT-based model that can be initialized from diverse GPT models, including open-source versions such as GPT-J, Falcon, and LLaMA, as well as closed-source versions such as GPT-3 and GPT-3.5. We compared our methods with PhenoTagger, a recently developed HPO recognition tool that combines rule-based and deep learning methods. We found that our methods can extract more phenotype concepts, including novel ones not characterized by HPO. We also performed case studies on biomedical literature to illustrate how new phenotype information can be recognized and extracted. We compared current BERT-based versus GPT-based models for phenotype tagging, in multiple aspects including model architecture, memory usage, speed, accuracy, and privacy protection. We also discussed the addition of a negation step and an HPO normalization layer to the transformer models for improved HPO term tagging. In conclusion, PhenoBCBERT and PhenoGPT enable the automated discovery of phenotype terms from clinical notes and biomedical literature, facilitating automated downstream tasks to derive new biological insights on human diseases.
Are We Closing the Loop Yet? Gaps in the Generalizability of VIS4ML Research
Authors: Hariharan Subramonyam, Jessica Hullman
Date: 2023-08-10 00:00:00

Visualization for machine learning (VIS4ML) research aims to help experts apply their prior knowledge to develop, understand, and improve the performance of machine learning models. In conceiving VIS4ML systems, researchers characterize the nature of human knowledge to support human-in-the-loop tasks, design interactive visualizations to make ML components interpretable and elicit knowledge, and evaluate the effectiveness of human-model interchange. We survey recent VIS4ML papers to assess the generalizability of research contributions and claims in enabling human-in-the-loop ML. Our results show potential gaps between the current scope of VIS4ML research and aspirations for its use in practice. We find that while papers motivate that VIS4ML systems are applicable beyond the specific conditions studied, conclusions are often overfitted to non-representative scenarios, are based on interactions with a small set of ML experts and well-understood datasets, fail to acknowledge crucial dependencies, and hinge on decisions that lack justification. We discuss approaches to close the gap between aspirations and research claims and suggest documentation practices to report generality constraints that better acknowledge the exploratory nature of VIS4ML research.
Jurassic World Remake: Bringing Ancient Fossils Back to Life via Zero-Shot Long Image-to-Image Translation
Authors: Alexander Martin, Haitian Zheng, Jie An, Jiebo Luo
Date: 2023-08-14 00:00:00
Tasks: Image-to-Image Translation

With a strong understanding of the target domain from natural language, we produce promising results in translating across large domain gaps and bringing skeletons back to life. In this work, we use text-guided latent diffusion models for zero-shot image-to-image translation (I2I) across large domain gaps (longI2I), where large amounts of new visual features and new geometry need to be generated to enter the target domain. Being able to perform translations across large domain gaps has a wide variety of real-world applications in criminology, astrology, environmental conservation, and paleontology. In this work, we introduce a new task Skull2Animal for translating between skulls and living animals. On this task, we find that unguided Generative Adversarial Networks (GANs) are not capable of translating across large domain gaps. Instead of these traditional I2I methods, we explore the use of guided diffusion and image editing models and provide a new benchmark model, Revive-2I, capable of performing zero-shot I2I via text-prompting latent diffusion models. We find that guidance is necessary for longI2I because, to bridge the large domain gap, prior knowledge about the target domain is needed. In addition, we find that prompting provides the best and most scalable information about the target domain as classifier-guided diffusion models require retraining for specific use cases and lack stronger constraints on the target domain because of the wide variety of images they are trained on.
Dual Associated Encoder for Face Restoration
Authors: Yu-Ju Tsai, Yu-Lun Liu, Lu Qi, Kelvin C. K. Chan, Ming-Hsuan Yang
Date: 2023-08-14 00:00:00
Tasks: Blind Face Restoration

Restoring facial details from low-quality (LQ) images has remained a challenging problem due to its ill-posedness induced by various degradations in the wild. The existing codebook prior mitigates the ill-posedness by leveraging an autoencoder and learned codebook of high-quality (HQ) features, achieving remarkable quality. However, existing approaches in this paradigm frequently depend on a single encoder pre-trained on HQ data for restoring HQ images, disregarding the domain gap between LQ and HQ images. As a result, the encoding of LQ inputs may be insufficient, resulting in suboptimal performance. To tackle this problem, we propose a novel dual-branch framework named DAEFR. Our method introduces an auxiliary LQ branch that extracts crucial information from the LQ inputs. Additionally, we incorporate association training to promote effective synergy between the two branches, enhancing code prediction and output quality. We evaluate the effectiveness of DAEFR on both synthetic and real-world datasets, demonstrating its superior performance in restoring facial details. Project page: https://liagm.github.io/DAEFR/
Group Pose: A Simple Baseline for End-to-End Multi-person Pose Estimation
Authors: Huan Liu, Qiang Chen, Zichang Tan, Jiang-Jiang Liu, Jian Wang, Xiangbo Su, Xiaolong Li, Kun Yao, Junyu Han, Errui Ding, Yao Zhao, Jingdong Wang
Date: 2023-08-14 00:00:00
Proceeding: ICCV 2023 1
Tasks: Decoder, Human Detection, Multi-Person Pose Estimation, Pose Estimation

In this paper, we study the problem of end-to-end multi-person pose estimation. State-of-the-art solutions adopt the DETR-like framework, and mainly develop the complex decoder, e.g., regarding pose estimation as keypoint box detection and combining with human detection in ED-Pose, hierarchically predicting with pose decoder and joint (keypoint) decoder in PETR. We present a simple yet effective transformer approach, named Group Pose. We simply regard $K$-keypoint pose estimation as predicting a set of $N\times K$ keypoint positions, each from a keypoint query, as well as representing each pose with an instance query for scoring $N$ pose predictions. Motivated by the intuition that the interaction, among across-instance queries of different types, is not directly helpful, we make a simple modification to decoder self-attention. We replace single self-attention over all the $N\times(K+1)$ queries with two subsequent group self-attentions: (i) $N$ within-instance self-attention, with each over $K$ keypoint queries and one instance query, and (ii) $(K+1)$ same-type across-instance self-attention, each over $N$ queries of the same type. The resulting decoder removes the interaction among across-instance type-different queries, easing the optimization and thus improving the performance. Experimental results on MS COCO and CrowdPose show that our approach without human box supervision is superior to previous methods with complex decoders, and even is slightly better than ED-Pose that uses human box supervision. $\href{https://github.com/Michel-liu/GroupPose-Paddle}{\rm Paddle}$ and $\href{https://github.com/Michel-liu/GroupPose}{\rm PyTorch}$ code are available.
A Unified Masked Autoencoder with Patchified Skeletons for Motion Synthesis
Authors: Esteve Valls Mascaro, Hyemin Ahn, Dongheui Lee
Date: 2023-08-14 00:00:00
Tasks: Human Pose Forecasting, Motion Synthesis

The synthesis of human motion has traditionally been addressed through task-dependent models that focus on specific challenges, such as predicting future motions or filling in intermediate poses conditioned on known key-poses. In this paper, we present a novel task-independent model called UNIMASK-M, which can effectively address these challenges using a unified architecture. Our model obtains comparable or better performance than the state-of-the-art in each field. Inspired by Vision Transformers (ViTs), our UNIMASK-M model decomposes a human pose into body parts to leverage the spatio-temporal relationships existing in human motion. Moreover, we reformulate various pose-conditioned motion synthesis tasks as a reconstruction problem with different masking patterns given as input. By explicitly informing our model about the masked joints, our UNIMASK-M becomes more robust to occlusions. Experimental results show that our model successfully forecasts human motion on the Human3.6M dataset. Moreover, it achieves state-of-the-art results in motion inbetweening on the LaFAN1 dataset, particularly in long transition periods. More information can be found on the project website https://evm7.github.io/UNIMASKM-page/
Accurate Eye Tracking from Dense 3D Surface Reconstructions using Single-Shot Deflectometry
Authors: Jiazhang Wang, Tianfu Wang, Bingjie Xu, Oliver Cossairt, Florian Willomitzer
Date: 2023-08-14 00:00:00

Eye-tracking plays a crucial role in the development of virtual reality devices, neuroscience research, and psychology. Despite its significance in numerous applications, achieving an accurate, robust, and fast eye-tracking solution remains a considerable challenge for current state-of-the-art methods. While existing reflection-based techniques (e.g., "glint tracking") are considered to be very accurate, their performance is limited by their reliance on sparse 3D surface data acquired solely from the cornea surface. In this paper, we rethink the way how specular reflections can be used for eye tracking: We propose a novel method for accurate and fast evaluation of the gaze direction that exploits teachings from single-shot phase-measuring-deflectometry(PMD). In contrast to state-of-the-art reflection-based methods, our method acquires dense 3D surface information of both cornea and sclera within only one single camera frame (single-shot). For a typical measurement, we acquire $>3000 \times$ more surface reflection points ("glints") than conventional methods. We show the feasibility of our approach with experimentally evaluated gaze errors on a realistic model eye below only $0.12^\circ$. Moreover, we demonstrate quantitative measurements on real human eyes in vivo, reaching accuracy values between only $0.46^\circ$ and $0.97^\circ$.
A Robust Image Forensic Framework Utilizing Multi-Colorspace Enriched Vision Transformer for Distinguishing Natural and Computer-Generated Images
Authors: Manjary P. Gangan, Anoop Kadan, Lajish V L
Date: 2023-08-14 00:00:00
Tasks: Image Forensics

The digital image forensics based research works in literature classifying natural and computer generated images primarily focuses on binary tasks. These tasks typically involve the classification of natural images versus computer graphics images only or natural images versus GAN generated images only, but not natural images versus both types of generated images simultaneously. Furthermore, despite the support of advanced convolutional neural networks and transformer based architectures that can achieve impressive classification accuracies for this forensic classification task of distinguishing natural and computer generated images, these models are seen to fail over the images that have undergone post-processing operations intended to deceive forensic algorithms, such as JPEG compression, Gaussian noise addition, etc. In this digital image forensic based work to distinguish between natural and computer-generated images encompassing both computer graphics and GAN generated images, we propose a robust forensic classifier framework leveraging enriched vision transformers. By employing a fusion approach for the networks operating in RGB and YCbCr color spaces, we achieve higher classification accuracy and robustness against the post-processing operations of JPEG compression and addition of Gaussian noise. Our approach outperforms baselines, demonstrating 94.25% test accuracy with significant performance gains in individual class accuracies. Visualizations of feature representations and attention maps reveal improved separability as well as improved information capture relevant to the forensic task. This work advances the state-of-the-art in image forensics by providing a generalized and resilient solution to distinguish between natural and generated images.
Diving with Penguins: Detecting Penguins and their Prey in Animal-borne Underwater Videos via Deep Learning
Authors: Kejia Zhang, Mingyu Yang, Stephen D. J. Lang, Alistair M. McInnes, Richard B. Sherley, Tilo Burghardt
Date: 2023-08-14 00:00:00

African penguins (Spheniscus demersus) are an endangered species. Little is known regarding their underwater hunting strategies and associated predation success rates, yet this is essential for guiding conservation. Modern bio-logging technology has the potential to provide valuable insights, but manually analysing large amounts of data from animal-borne video recorders (AVRs) is time-consuming. In this paper, we publish an animal-borne underwater video dataset of penguins and introduce a ready-to-deploy deep learning system capable of robustly detecting penguins (mAP50@98.0%) and also instances of fish (mAP50@73.3%). We note that the detectors benefit explicitly from air-bubble learning to improve accuracy. Extending this detector towards a dual-stream behaviour recognition network, we also provide the first results for identifying predation behaviour in penguin underwater videos. Whilst results are promising, further work is required for useful applicability of predation behaviour detection in field scenarios. In summary, we provide a highly reliable underwater penguin detector, a fish detector, and a valuable first attempt towards an automated visual detection of complex behaviours in a marine predator. We publish the networks, the DivingWithPenguins video dataset, annotations, splits, and weights for full reproducibility and immediate usability by practitioners.
Efficient Real-time Smoke Filtration with 3D LiDAR for Search and Rescue with Autonomous Heterogeneous Robotic Systems
Authors: Alexander Kyuroson, Anton Koval, George Nikolakopoulos
Date: 2023-08-14 00:00:00
Tasks: Autonomous Navigation, object-detection, Object Detection

Search and Rescue (SAR) missions in harsh and unstructured Sub-Terranean (Sub-T) environments in the presence of aerosol particles have recently become the main focus in the field of robotics. Aerosol particles such as smoke and dust directly affect the performance of any mobile robotic platform due to their reliance on their onboard perception systems for autonomous navigation and localization in Global Navigation Satellite System (GNSS)-denied environments. Although obstacle avoidance and object detection algorithms are robust to the presence of noise to some degree, their performance directly relies on the quality of captured data by onboard sensors such as Light Detection And Ranging (LiDAR) and camera. Thus, this paper proposes a novel modular agnostic filtration pipeline based on intensity and spatial information such as local point density for removal of detected smoke particles from Point Cloud (PCL) prior to its utilization for collision detection. Furthermore, the efficacy of the proposed framework in the presence of smoke during multiple frontier exploration missions is investigated while the experimental results are presented to facilitate comparison with other methodologies and their computational impact. This provides valuable insight to the research community for better utilization of filtration schemes based on available computation resources while considering the safe autonomous navigation of mobile robots.