pwc-archive/papers-with-abstracts huggingface dataset:
Py-Tetrad and RPy-Tetrad: A New Python Interface with R Support for Tetrad Causal Search
Authors: Joseph D. Ramsey, Bryan Andrews
Date: 2023-08-13 00:00:00

We give novel Python and R interfaces for the (Java) Tetrad project for causal modeling, search, and estimation. The Tetrad project is a mainstay in the literature, having been under consistent development for over 30 years. Some of its algorithms are now classics, like PC and FCI; others are recent developments. It is increasingly the case, however, that researchers need to access the underlying Java code from Python or R. Existing methods for doing this are inadequate. We provide new, up-to-date methods using the JPype Python-Java interface and the Reticulate Python-R interface, directly solving these issues. With the addition of some simple tools and the provision of working examples for both Python and R, using JPype and Reticulate to interface Python and R with Tetrad is straightforward and intuitive.
Evaluating the anticipated outcomes of MRI seizure image from open-source tool- Prototype approach
Authors: Jayanthi Vajiram, Aishwarya Senthil, Utkarsh Maurya
Date: 2023-08-13 00:00:00

Epileptic Seizure is an abnormal neuronal exertion in the brain, affecting nearly 70 million of the world's population (Ngugi et al., 2010). So many open-source neuroimaging tools are used for metabolism checkups and analysis purposes. The scope of open-source tools like MATLAB, Slicer 3D, Brain Suite21a, SPM, and MedCalc are explained in this paper. MATLAB was used by 60% of the researchers for their image processing and 10% of them use their proprietary software. More than 30% of the researchers use other open-source software tools with their processing techniques for the study of magnetic resonance seizure images
Learning Deductive Reasoning from Synthetic Corpus based on Formal Logic
Authors: Terufumi Morishita, Gaku Morio, Atsuki Yamaguchi, Yasuhiro Sogawa
Date: 2023-08-11 00:00:00
Tasks: Formal Logic, Logical Reasoning

We study a synthetic corpus based approach for language models (LMs) to acquire logical deductive reasoning ability. The previous studies generated deduction examples using specific sets of deduction rules. However, these rules were limited or otherwise arbitrary, limiting the generalizability of acquired reasoning ability. We rethink this and adopt a well-grounded set of deduction rules based on formal logic theory, which can derive any other deduction rules when combined in a multistep way. Then, using the proposed corpora, which we name FLD (Formal Logic Deduction), we first evaluate and analyze the logical reasoning ability of the latest LLMs. Even GPT-4 can solve only half of the problems, suggesting that pure logical reasoning isolated from knowledge is still challenging for the LLMs, and additional training specialized in logical reasoning is indeed essential. We next empirically verify that LMs trained on FLD corpora acquire more generalizable reasoning ability. Furthermore, we identify the aspects of reasoning ability on which deduction corpora can enhance LMs and those on which they cannot, and discuss future directions on each aspect. The released corpora serve both as learning resources and as challenging benchmarks.
An Encoder-Decoder Approach for Packing Circles
Authors: Akshay Kiran Jose, Gangadhar Karevvanavar, Rajshekhar V Bhat
Date: 2023-08-11 00:00:00
Tasks: Decoder

The problem of packing smaller objects within a larger object has been of interest since decades. In these problems, in addition to the requirement that the smaller objects must lie completely inside the larger objects, they are expected to not overlap or have minimum overlap with each other. Due to this, the problem of packing turns out to be a non-convex problem, obtaining whose optimal solution is challenging. As such, several heuristic approaches have been used for obtaining sub-optimal solutions in general, and provably optimal solutions for some special instances. In this paper, we propose a novel encoder-decoder architecture consisting of an encoder block, a perturbation block and a decoder block, for packing identical circles within a larger circle. In our approach, the encoder takes the index of a circle to be packed as an input and outputs its center through a normalization layer, the perturbation layer adds controlled perturbations to the center, ensuring that it does not deviate beyond the radius of the smaller circle to be packed, and the decoder takes the perturbed center as input and estimates the index of the intended circle for packing. We parameterize the encoder and decoder by a neural network and optimize it to reduce an error between the decoder's estimated index and the actual index of the circle provided as input to the encoder. The proposed approach can be generalized to pack objects of higher dimensions and different shapes by carefully choosing normalization and perturbation layers. The approach gives a sub-optimal solution and is able to pack smaller objects within a larger object with competitive performance with respect to classical methods.
Existential Notation3 Logic
Authors: Dörthe Arndt, Stephan Mennicke
Date: 2023-08-10 00:00:00

In this paper, we delve into Notation3 Logic (N3), an extension of RDF, which empowers users to craft rules introducing fresh blank nodes to RDF graphs. This capability is pivotal in various applications such as ontology mapping, given the ubiquitous presence of blank nodes directly or in auxiliary constructs across the Web. However, the availability of fast N3 reasoners fully supporting blank node introduction remains limited. Conversely, engines like VLog or Nemo, though not explicitly designed for Semantic Web rule formats, cater to analogous constructs, namely existential rules. We investigate the correlation between N3 rules featuring blank nodes in their heads and existential rules. We pinpoint a subset of N3 that seamlessly translates to existential rules and establish a mapping preserving the equivalence of N3 formulae. To showcase the potential benefits of this translation in N3 reasoning, we implement this mapping and compare the performance of N3 reasoners like EYE and cwm against VLog and Nemo, both on native N3 rules and their translated counterparts. Our findings reveal that existential rule reasoners excel in scenarios with abundant facts, while the EYE reasoner demonstrates exceptional speed in managing a high volume of dependent rules. Additionally to the original conference version of this paper, we include all proofs of the theorems and introduce a new section dedicated to N3 lists featuring built-in functions and how they are implemented in existential rules. Adding lists to our translation/framework gives interesting insights on related design decisions influencing the standardization of N3.
Variations on the Reinforcement Learning performance of Blackjack
Authors: Avish Buramdoyal, Tim Gebbie
Date: 2023-08-09 00:00:00
Tasks: Q-Learning, reinforcement-learning, Reinforcement Learning

Blackjack or "21" is a popular card-based game of chance and skill. The objective of the game is to win by obtaining a hand total higher than the dealer's without exceeding 21. The ideal blackjack strategy will maximize financial return in the long run while avoiding gambler's ruin. The stochastic environment and inherent reward structure of blackjack presents an appealing problem to better understand reinforcement learning agents in the presence of environment variations. Here we consider a q-learning solution for optimal play and investigate the rate of learning convergence of the algorithm as a function of deck size. A blackjack simulator allowing for universal blackjack rules is also implemented to demonstrate the extent to which a card counter perfectly using the basic strategy and hi-lo system can bring the house to bankruptcy and how environment variations impact this outcome. The novelty of our work is to place this conceptual understanding of the impact of deck size in the context of learning agent convergence.
CoDeF: Content Deformation Fields for Temporally Consistent Video Processing
Authors: Hao Ouyang, Qiuyu Wang, Yuxi Xiao, Qingyan Bai, Juntao Zhang, Kecheng Zheng, Xiaowei Zhou, Qifeng Chen, Yujun Shen
Date: 2023-08-15 00:00:00
Proceeding: CVPR 2024 1
Tasks: Image-to-Image Translation, Keypoint Detection, Translation

We present the content deformation field CoDeF as a new type of video representation, which consists of a canonical content field aggregating the static contents in the entire video and a temporal deformation field recording the transformations from the canonical image (i.e., rendered from the canonical content field) to each individual frame along the time axis. Given a target video, these two fields are jointly optimized to reconstruct it through a carefully tailored rendering pipeline. We advisedly introduce some regularizations into the optimization process, urging the canonical content field to inherit semantics (e.g., the object shape) from the video. With such a design, CoDeF naturally supports lifting image algorithms for video processing, in the sense that one can apply an image algorithm to the canonical image and effortlessly propagate the outcomes to the entire video with the aid of the temporal deformation field. We experimentally show that CoDeF is able to lift image-to-image translation to video-to-video translation and lift keypoint detection to keypoint tracking without any training. More importantly, thanks to our lifting strategy that deploys the algorithms on only one image, we achieve superior cross-frame consistency in processed videos compared to existing video-to-video translation approaches, and even manage to track non-rigid objects like water and smog. Project page can be found at https://qiuyu96.github.io/CoDeF/.
Helping Hands: An Object-Aware Ego-Centric Video Recognition Model
Authors: Chuhan Zhang, Ankush Gupta, Andrew Zisserman
Date: 2023-08-15 00:00:00
Proceeding: ICCV 2023 1
Tasks: Decoder, Object, Text Retrieval, Video Recognition, Video-Text Retrieval, Video Understanding

We introduce an object-aware decoder for improving the performance of spatio-temporal representations on ego-centric videos. The key idea is to enhance object-awareness during training by tasking the model to predict hand positions, object positions, and the semantic label of the objects using paired captions when available. At inference time the model only requires RGB frames as inputs, and is able to track and ground objects (although it has not been trained explicitly for this). We demonstrate the performance of the object-aware representations learnt by our model, by: (i) evaluating it for strong transfer, i.e. through zero-shot testing, on a number of downstream video-text retrieval and classification benchmarks; and (ii) by using the representations learned as input for long-term video understanding tasks (e.g. Episodic Memory in Ego4D). In all cases the performance improves over the state of the art -- even compared to networks trained with far larger batch sizes. We also show that by using noisy image-level detection as pseudo-labels in training, the model learns to provide better bounding boxes using video consistency, as well as grounding the words in the associated text descriptions. Overall, we show that the model can act as a drop-in replacement for an ego-centric video model to improve performance through visual-text grounding.
A Foundation Language-Image Model of the Retina (FLAIR): Encoding Expert Knowledge in Text Supervision
Authors: Julio Silva-Rodríguez, Hadi Chakor, Riadh Kobbi, Jose Dolz, Ismail Ben Ayed
Date: 2023-08-15 00:00:00
Tasks: Descriptive, Language Modelling

Foundation vision-language models are currently transforming computer vision, and are on the rise in medical imaging fueled by their very promising generalization capabilities. However, the initial attempts to transfer this new paradigm to medical imaging have shown less impressive performances than those observed in other domains, due to the significant domain shift and the complex, expert domain knowledge inherent to medical-imaging tasks. Motivated by the need for domain-expert foundation models, we present FLAIR, a pre-trained vision-language model for universal retinal fundus image understanding. To this end, we compiled 38 open-access, mostly categorical fundus imaging datasets from various sources, with up to 101 different target conditions and 288,307 images. We integrate the expert's domain knowledge in the form of descriptive textual prompts, during both pre-training and zero-shot inference, enhancing the less-informative categorical supervision of the data. Such a textual expert's knowledge, which we compiled from the relevant clinical literature and community standards, describes the fine-grained features of the pathologies as well as the hierarchies and dependencies between them. We report comprehensive evaluations, which illustrate the benefit of integrating expert knowledge and the strong generalization capabilities of FLAIR under difficult scenarios with domain shifts or unseen categories. When adapted with a lightweight linear probe, FLAIR outperforms fully-trained, dataset-focused models, more so in the few-shot regimes. Interestingly, FLAIR outperforms by a wide margin larger-scale generalist image-language models and retina domain-specific self-supervised networks, which emphasizes the potential of embedding experts' domain knowledge and the limitations of generalist models in medical imaging.
Memory-and-Anticipation Transformer for Online Action Understanding
Authors: Jiahao Wang, Guo Chen, Yifei HUANG, LiMin Wang, Tong Lu
Date: 2023-08-15 00:00:00
Proceeding: ICCV 2023 1
Tasks: Action Detection, Action Understanding, Online Action Detection

Most existing forecasting systems are memory-based methods, which attempt to mimic human forecasting ability by employing various memory mechanisms and have progressed in temporal modeling for memory dependency. Nevertheless, an obvious weakness of this paradigm is that it can only model limited historical dependence and can not transcend the past. In this paper, we rethink the temporal dependence of event evolution and propose a novel memory-anticipation-based paradigm to model an entire temporal structure, including the past, present, and future. Based on this idea, we present Memory-and-Anticipation Transformer (MAT), a memory-anticipation-based approach, to address the online action detection and anticipation tasks. In addition, owing to the inherent superiority of MAT, it can process online action detection and anticipation tasks in a unified manner. The proposed MAT model is tested on four challenging benchmarks TVSeries, THUMOS'14, HDD, and EPIC-Kitchens-100, for online action detection and anticipation tasks, and it significantly outperforms all existing methods. Code is available at https://github.com/Echo0125/Memory-and-Anticipation-Transformer.
The Challenge of Fetal Cardiac MRI Reconstruction Using Deep Learning
Authors: Denis Prokopenko, Kerstin Hammernik, Thomas Roberts, David F A Lloyd, Daniel Rueckert, Joseph V Hajnal
Date: 2023-08-15 00:00:00
Tasks: Anatomy, Deep Learning, MRI Reconstruction

Dynamic free-breathing fetal cardiac MRI is one of the most challenging modalities, which requires high temporal and spatial resolution to depict rapid changes in a small fetal heart. The ability of deep learning methods to recover undersampled data could help to optimise the kt-SENSE acquisition strategy and improve non-gated kt-SENSE reconstruction quality. In this work, we explore supervised deep learning networks for reconstruction of kt-SENSE style acquired data using an extensive in vivo dataset. Having access to fully-sampled low-resolution multi-coil fetal cardiac MRI, we study the performance of the networks to recover fully-sampled data from undersampled data. We consider model architectures together with training strategies taking into account their application in the real clinical setup used to collect the dataset to enable networks to recover prospectively undersampled data. We explore a set of modifications to form a baseline performance evaluation for dynamic fetal cardiac MRI on real data. We systematically evaluate the models on coil-combined data to reveal the effect of the suggested changes to the architecture in the context of fetal heart properties. We show that the best-performers recover a detailed depiction of the maternal anatomy on a large scale, but the dynamic properties of the fetal heart are under-represented. Training directly on multi-coil data improves the performance of the models, allows their prospective application to undersampled data and makes them outperform CTFNet introduced for adult cardiac cine MRI. However, these models deliver similar qualitative performances recovering the maternal body very well but underestimating the dynamic properties of fetal heart. This dynamic feature of fast change of fetal heart that is highly localised suggests both more targeted training and evaluation methods might be needed for fetal heart application.
SEDA: Self-Ensembling ViT with Defensive Distillation and Adversarial Training for robust Chest X-rays Classification
Authors: Raza Imam, Ibrahim Almakky, Salma Alrashdi, Baketah Alrashdi, Mohammad Yaqub
Date: 2023-08-15 00:00:00
Tasks: Computational Efficiency, X-ray Classification

Deep Learning methods have recently seen increased adoption in medical imaging applications. However, elevated vulnerabilities have been explored in recent Deep Learning solutions, which can hinder future adoption. Particularly, the vulnerability of Vision Transformer (ViT) to adversarial, privacy, and confidentiality attacks raise serious concerns about their reliability in medical settings. This work aims to enhance the robustness of self-ensembling ViTs for the tuberculosis chest x-ray classification task. We propose Self-Ensembling ViT with defensive Distillation and Adversarial training (SEDA). SEDA utilizes efficient CNN blocks to learn spatial features with various levels of abstraction from feature representations extracted from intermediate ViT blocks, that are largely unaffected by adversarial perturbations. Furthermore, SEDA leverages adversarial training in combination with defensive distillation for improved robustness against adversaries. Training using adversarial examples leads to better model generalizability and improves its ability to handle perturbations. Distillation using soft probabilities introduces uncertainty and variation into the output probabilities, making it more difficult for adversarial and privacy attacks. Extensive experiments performed with the proposed architecture and training paradigm on publicly available Tuberculosis x-ray dataset shows SOTA efficacy of SEDA compared to SEViT in terms of computational efficiency with 70x times lighter framework and enhanced robustness of +9%.
ObjectSDF++: Improved Object-Compositional Neural Implicit Surfaces
Authors: Qianyi Wu, Kaisiyuan Wang, Kejie Li, Jianmin Zheng, Jianfei Cai
Date: 2023-08-15 00:00:00
Proceeding: ICCV 2023 1
Tasks: 3D Reconstruction, Multi-View 3D Reconstruction, Object, Object Reconstruction, Surface Reconstruction

In recent years, neural implicit surface reconstruction has emerged as a popular paradigm for multi-view 3D reconstruction. Unlike traditional multi-view stereo approaches, the neural implicit surface-based methods leverage neural networks to represent 3D scenes as signed distance functions (SDFs). However, they tend to disregard the reconstruction of individual objects within the scene, which limits their performance and practical applications. To address this issue, previous work ObjectSDF introduced a nice framework of object-composition neural implicit surfaces, which utilizes 2D instance masks to supervise individual object SDFs. In this paper, we propose a new framework called ObjectSDF++ to overcome the limitations of ObjectSDF. First, in contrast to ObjectSDF whose performance is primarily restricted by its converted semantic field, the core component of our model is an occlusion-aware object opacity rendering formulation that directly volume-renders object opacity to be supervised with instance masks. Second, we design a novel regularization term for object distinction, which can effectively mitigate the issue that ObjectSDF may result in unexpected reconstruction in invisible regions due to the lack of constraint to prevent collisions. Our extensive experiments demonstrate that our novel framework not only produces superior object reconstruction results but also significantly improves the quality of scene reconstruction. Code and more resources can be found in \url{https://qianyiwu.github.io/objectsdf++}
StyleDiffusion: Controllable Disentangled Style Transfer via Diffusion Models
Authors: Zhizhong Wang, Lei Zhao, Wei Xing
Date: 2023-08-15 00:00:00
Proceeding: ICCV 2023 1
Tasks: Disentanglement, Style Transfer

Content and style (C-S) disentanglement is a fundamental problem and critical challenge of style transfer. Existing approaches based on explicit definitions (e.g., Gram matrix) or implicit learning (e.g., GANs) are neither interpretable nor easy to control, resulting in entangled representations and less satisfying results. In this paper, we propose a new C-S disentangled framework for style transfer without using previous assumptions. The key insight is to explicitly extract the content information and implicitly learn the complementary style information, yielding interpretable and controllable C-S disentanglement and style transfer. A simple yet effective CLIP-based style disentanglement loss coordinated with a style reconstruction prior is introduced to disentangle C-S in the CLIP image space. By further leveraging the powerful style removal and generative ability of diffusion models, our framework achieves superior results than state of the art and flexible C-S disentanglement and trade-off control. Our work provides new insights into the C-S disentanglement in style transfer and demonstrates the potential of diffusion models for learning well-disentangled C-S characteristics.
CCD-3DR: Consistent Conditioning in Diffusion for Single-Image 3D Reconstruction
Authors: Yan Di, Chenyangguang Zhang, Pengyuan Wang, Guangyao Zhai, Ruida Zhang, Fabian Manhardt, Benjamin Busam, Xiangyang Ji, Federico Tombari
Date: 2023-08-15 00:00:00
Tasks: 3D Reconstruction

In this paper, we present a novel shape reconstruction method leveraging diffusion model to generate 3D sparse point cloud for the object captured in a single RGB image. Recent methods typically leverage global embedding or local projection-based features as the condition to guide the diffusion model. However, such strategies fail to consistently align the denoised point cloud with the given image, leading to unstable conditioning and inferior performance. In this paper, we present CCD-3DR, which exploits a novel centered diffusion probabilistic model for consistent local feature conditioning. We constrain the noise and sampled point cloud from the diffusion model into a subspace where the point cloud center remains unchanged during the forward diffusion process and reverse process. The stable point cloud center further serves as an anchor to align each point with its corresponding local projection-based features. Extensive experiments on synthetic benchmark ShapeNet-R2N2 demonstrate that CCD-3DR outperforms all competitors by a large margin, with over 40% improvement. We also provide results on real-world dataset Pix3D to thoroughly demonstrate the potential of CCD-3DR in real-world applications. Codes will be released soon