pwc-archive/papers-with-abstracts huggingface dataset:
Comparison of Cross-Entropy, Dice, and Focal Loss for Sea Ice Type Segmentation
Authors: Rafael Pires de Lima, Behzad Vahedi, Morteza Karimzadeh
Date: 2023-10-26 00:00:00

Up-to-date sea ice charts are crucial for safer navigation in ice-infested waters. Recently, Convolutional Neural Network (CNN) models show the potential to accelerate the generation of ice maps for large regions. However, results from CNN models still need to undergo scrutiny as higher metrics performance not always translate to adequate outputs. Sea ice type classes are imbalanced, requiring special treatment during training. We evaluate how three different loss functions, some developed for imbalanced class problems, affect the performance of CNN models trained to predict the dominant ice type in Sentinel-1 images. Despite the fact that Dice and Focal loss produce higher metrics, results from cross-entropy seem generally more physically consistent.
Virtual Accessory Try-On via Keypoint Hallucination
Authors: Junhong Gou, Bo Zhang, Li Niu, Jianfu Zhang, Jianlou Si, Chen Qian, Liqing Zhang
Date: 2023-10-26 00:00:00
Tasks: Hallucination, Semantic Segmentation, Virtual Try-on

The virtual try-on task refers to fitting the clothes from one image onto another portrait image. In this paper, we focus on virtual accessory try-on, which fits accessory (e.g., glasses, ties) onto a face or portrait image. Unlike clothing try-on, which relies on human silhouette as guidance, accessory try-on warps the accessory into an appropriate location and shape to generate a plausible composite image. In contrast to previous try-on methods that treat foreground (i.e., accessories) and background (i.e., human faces or bodies) equally, we propose a background-oriented network to utilize the prior knowledge of human bodies and accessories. Specifically, our approach learns the human body priors and hallucinates the target locations of specified foreground keypoints in the background. Then our approach will inject foreground information with accessory priors into the background UNet. Based on the hallucinated target locations, the warping parameters are calculated to warp the foreground. Moreover, this background-oriented network can also easily incorporate auxiliary human face/body semantic segmentation supervision to further boost performance. Experiments conducted on STRAT dataset validate the effectiveness of our proposed method.
Task-driven Prompt Evolution for Foundation Models
Authors: Rachana Sathish, Rahul Venkataramani, K S Shriram, Prasad Sudhakar
Date: 2023-10-26 00:00:00
Tasks: Image Segmentation, Segmentation, Semantic Segmentation, Visual Prompt Tuning

Promptable foundation models, particularly Segment Anything Model (SAM), have emerged as a promising alternative to the traditional task-specific supervised learning for image segmentation. However, many evaluation studies have found that their performance on medical imaging modalities to be underwhelming compared to conventional deep learning methods. In the world of large pre-trained language and vision-language models, learning prompt from downstream tasks has achieved considerable success in improving performance. In this work, we propose a plug-and-play Prompt Optimization Technique for foundation models like SAM (SAMPOT) that utilizes the downstream segmentation task to optimize the human-provided prompt to obtain improved performance. We demonstrate the utility of SAMPOT on lung segmentation in chest X-ray images and obtain an improvement on a significant number of cases ($\sim75\%$) over human-provided initial prompts. We hope this work will lead to further investigations in the nascent field of automatic visual prompt-tuning.
Deep Learning on SAR Imagery: Transfer Learning Versus Randomly Initialized Weights
Authors: Morteza Karimzadeh, Rafael Pires de Lima
Date: 2023-10-26 00:00:00
Tasks: Deep Learning, Transfer Learning

Deploying deep learning on Synthetic Aperture Radar (SAR) data is becoming more common for mapping purposes. One such case is sea ice, which is highly dynamic and rapidly changes as a result of the combined effect of wind, temperature, and ocean currents. Therefore, frequent mapping of sea ice is necessary to ensure safe marine navigation. However, there is a general shortage of expert-labeled data to train deep learning algorithms. Fine-tuning a pre-trained model on SAR imagery is a potential solution. In this paper, we compare the performance of deep learning models trained from scratch using randomly initialized weights against pre-trained models that we fine-tune for this purpose. Our results show that pre-trained models lead to better results, especially on test samples from the melt season.
Enhancing sea ice segmentation in Sentinel-1 images with atrous convolutions
Authors: Rafael Pires de Lima, Behzad Vahedi, Nick Hughes, Andrew P. Barrett, Walter Meier, Morteza Karimzadeh
Date: 2023-10-26 00:00:00
Tasks: Binary Classification, Image Segmentation, Semantic Segmentation

Due to the growing volume of remote sensing data and the low latency required for safe marine navigation, machine learning (ML) algorithms are being developed to accelerate sea ice chart generation, currently a manual interpretation task. However, the low signal-to-noise ratio of the freely available Sentinel-1 Synthetic Aperture Radar (SAR) imagery, the ambiguity of backscatter signals for ice types, and the scarcity of open-source high-resolution labelled data makes automating sea ice mapping challenging. We use Extreme Earth version 2, a high-resolution benchmark dataset generated for ML training and evaluation, to investigate the effectiveness of ML for automated sea ice mapping. Our customized pipeline combines ResNets and Atrous Spatial Pyramid Pooling for SAR image segmentation. We investigate the performance of our model for: i) binary classification of sea ice and open water in a segmentation framework; and ii) a multiclass segmentation of five sea ice types. For binary ice-water classification, models trained with our largest training set have weighted F1 scores all greater than 0.95 for January and July test scenes. Specifically, the median weighted F1 score was 0.98, indicating high performance for both months. By comparison, a competitive baseline U-Net has a weighted average F1 score of ranging from 0.92 to 0.94 (median 0.93) for July, and 0.97 to 0.98 (median 0.97) for January. Multiclass ice type classification is more challenging, and even though our models achieve 2% improvement in weighted F1 average compared to the baseline U-Net, test weighted F1 is generally between 0.6 and 0.80. Our approach can efficiently segment full SAR scenes in one run, is faster than the baseline U-Net, retains spatial resolution and dimension, and is more robust against noise compared to approaches that rely on patch classification.
LP-OVOD: Open-Vocabulary Object Detection by Linear Probing
Authors: Chau Pham, Truong Vu, Khoi Nguyen
Date: 2023-10-26 00:00:00
Tasks: Object, object-detection, Object Detection, Open-vocabulary object detection, Open Vocabulary Object Detection

This paper addresses the challenging problem of open-vocabulary object detection (OVOD) where an object detector must identify both seen and unseen classes in test images without labeled examples of the unseen classes in training. A typical approach for OVOD is to use joint text-image embeddings of CLIP to assign box proposals to their closest text label. However, this method has a critical issue: many low-quality boxes, such as over- and under-covered-object boxes, have the same similarity score as high-quality boxes since CLIP is not trained on exact object location information. To address this issue, we propose a novel method, LP-OVOD, that discards low-quality boxes by training a sigmoid linear classifier on pseudo labels retrieved from the top relevant region proposals to the novel text. Experimental results on COCO affirm the superior performance of our approach over the state of the art, achieving $\textbf{40.5}$ in $\text{AP}_{novel}$ using ResNet50 as the backbone and without external datasets or knowing novel classes during training. Our code will be available at https://github.com/VinAIResearch/LP-OVOD.
Navigating Data Heterogeneity in Federated Learning A Semi-Supervised Federated Object Detection
Authors: Taehyeon Kim, Eric Lin, Junu Lee, Christian Lau, Vaikkunth Mugunthan
Date: 2023-10-26 00:00:00
Tasks: Autonomous Driving, Federated Learning, Navigate, object-detection, Object Detection, Pseudo Label, Semi-Supervised Object Detection

Federated Learning (FL) has emerged as a potent framework for training models across distributed data sources while maintaining data privacy. Nevertheless, it faces challenges with limited high-quality labels and non-IID client data, particularly in applications like autonomous driving. To address these hurdles, we navigate the uncharted waters of Semi-Supervised Federated Object Detection (SSFOD). We present a pioneering SSFOD framework, designed for scenarios where labeled data reside only at the server while clients possess unlabeled data. Notably, our method represents the inaugural implementation of SSFOD for clients with 0% labeled non-IID data, a stark contrast to previous studies that maintain some subset of labels at each client. We propose FedSTO, a two-stage strategy encompassing Selective Training followed by Orthogonally enhanced full-parameter training, to effectively address data shift (e.g. weather conditions) between server and clients. Our contributions include selectively refining the backbone of the detector to avert overfitting, orthogonality regularization to boost representation divergence, and local EMA-driven pseudo label assignment to yield high-quality pseudo labels. Extensive validation on prominent autonomous driving datasets (BDD100K, Cityscapes, and SODA10M) attests to the efficacy of our approach, demonstrating state-of-the-art results. Remarkably, FedSTO, using just 20-30% of labels, performs nearly as well as fully-supervised centralized training methods.
Automating lichen monitoring in ecological studies using instance segmentation of time-lapse images
Authors: Safwen Naimi, Olfa Koubaa, Wassim Bouachir, Guillaume-Alexandre Bilodeau, Gregory Jeddore, Patricia Baines, David Correia, Andre Arsenault
Date: 2023-10-26 00:00:00
Tasks: Instance Segmentation, Semantic Segmentation

Lichens are symbiotic organisms composed of fungi, algae, and/or cyanobacteria that thrive in a variety of environments. They play important roles in carbon and nitrogen cycling, and contribute directly and indirectly to biodiversity. Ecologists typically monitor lichens by using them as indicators to assess air quality and habitat conditions. In particular, epiphytic lichens, which live on trees, are key markers of air quality and environmental health. A new method of monitoring epiphytic lichens involves using time-lapse cameras to gather images of lichen populations. These cameras are used by ecologists in Newfoundland and Labrador to subsequently analyze and manually segment the images to determine lichen thalli condition and change. These methods are time-consuming and susceptible to observer bias. In this work, we aim to automate the monitoring of lichens over extended periods and to estimate their biomass and condition to facilitate the task of ecologists. To accomplish this, our proposed framework uses semantic segmentation with an effective training approach to automate monitoring and biomass estimation of epiphytic lichens on time-lapse images. We show that our method has the potential to significantly improve the accuracy and efficiency of lichen population monitoring, making it a valuable tool for forest ecologists and environmental scientists to evaluate the impact of climate change on Canada's forests. To the best of our knowledge, this is the first time that such an approach has been used to assist ecologists in monitoring and analyzing epiphytic lichens.
HCT: Hybrid Convnet-Transformer for Parkinson's disease detection and severity prediction from gait
Authors: Safwen Naimi, Wassim Bouachir, Guillaume-Alexandre Bilodeau
Date: 2023-10-26 00:00:00
Tasks: severity prediction

In this paper, we propose a novel deep learning method based on a new Hybrid ConvNet-Transformer architecture to detect and stage Parkinson's disease (PD) from gait data. We adopt a two-step approach by dividing the problem into two sub-problems. Our Hybrid ConvNet-Transformer model first distinguishes healthy versus parkinsonian patients. If the patient is parkinsonian, a multi-class Hybrid ConvNet-Transformer model determines the Hoehn and Yahr (H&Y) score to assess the PD severity stage. Our hybrid architecture exploits the strengths of both Convolutional Neural Networks (ConvNets) and Transformers to accurately detect PD and determine the severity stage. In particular, we take advantage of ConvNets to capture local patterns and correlations in the data, while we exploit Transformers for handling long-term dependencies in the input signal. We show that our hybrid method achieves superior performance when compared to other state-of-the-art methods, with a PD detection accuracy of 97% and a severity staging accuracy of 87%. Our source code is available at: https://github.com/SafwenNaimi
HyperFields: Towards Zero-Shot Generation of NeRFs from Text
Authors: Sudarshan Babu, Richard Liu, Avery Zhou, Michael Maire, Greg Shakhnarovich, Rana Hanocka
Date: 2023-10-26 00:00:00
Tasks: NeRF

We introduce HyperFields, a method for generating text-conditioned Neural Radiance Fields (NeRFs) with a single forward pass and (optionally) some fine-tuning. Key to our approach are: (i) a dynamic hypernetwork, which learns a smooth mapping from text token embeddings to the space of NeRFs; (ii) NeRF distillation training, which distills scenes encoded in individual NeRFs into one dynamic hypernetwork. These techniques enable a single network to fit over a hundred unique scenes. We further demonstrate that HyperFields learns a more general map between text and NeRFs, and consequently is capable of predicting novel in-distribution and out-of-distribution scenes -- either zero-shot or with a few finetuning steps. Finetuning HyperFields benefits from accelerated convergence thanks to the learned general map, and is capable of synthesizing novel scenes 5 to 10 times faster than existing neural optimization-based methods. Our ablation experiments show that both the dynamic architecture and NeRF distillation are critical to the expressivity of HyperFields.
Exploring Question Decomposition for Zero-Shot VQA
Date: 2023-10-25 00:00:00
Proceeding: NeurIPS 2023 11
Tasks: Question Answering, Visual Question Answering, Visual Question Answering (VQA)

Visual question answering (VQA) has traditionally been treated as a single-step task where each question receives the same amount of effort, unlike natural human question-answering strategies. We explore a question decomposition strategy for VQA to overcome this limitation. We probe the ability of recently developed large vision-language models to use human-written decompositions and produce their own decompositions of visual questions, finding they are capable of learning both tasks from demonstrations alone. However, we show that naive application of model-written decompositions can hurt performance. We introduce a model-driven selective decomposition approach for second-guessing predictions and correcting errors, and validate its effectiveness on eight VQA tasks across three domains, showing consistent improvements in accuracy, including improvements of >20% on medical VQA datasets and boosting the zero-shot performance of BLIP-2 above chance on a VQA reformulation of the challenging Winoground task. Project Site: https://zaidkhan.me/decomposition-0shot-vqa/
Trust, but Verify: Robust Image Segmentation using Deep Learning
Authors: Fahim Ahmed Zaman, Xiaodong Wu, Weiyu Xu, Milan Sonka, Raghuraman Mudumbai
Date: 2023-10-25 00:00:00
Tasks: Deep Learning, Image Segmentation, Medical Image Segmentation, Segmentation, Semantic Segmentation

We describe a method for verifying the output of a deep neural network for medical image segmentation that is robust to several classes of random as well as worst-case perturbations i.e. adversarial attacks. This method is based on a general approach recently developed by the authors called "Trust, but Verify" wherein an auxiliary verification network produces predictions about certain masked features in the input image using the segmentation as an input. A well-designed auxiliary network will produce high-quality predictions when the input segmentations are accurate, but will produce low-quality predictions when the segmentations are incorrect. Checking the predictions of such a network with the original image allows us to detect bad segmentations. However, to ensure the verification method is truly robust, we need a method for checking the quality of the predictions that does not itself rely on a black-box neural network. Indeed, we show that previous methods for segmentation evaluation that do use deep neural regression networks are vulnerable to false negatives i.e. can inaccurately label bad segmentations as good. We describe the design of a verification network that avoids such vulnerability and present results to demonstrate its robustness compared to previous methods.
An Efficient Deep Learning-based approach for Recognizing Agricultural Pests in the Wild
Authors: Mohtasim Hadi Rafi, Mohammad Ratul Mahjabin, Md Sabbir Rahman
Date: 2023-10-25 00:00:00
Tasks: Transfer Learning

One of the biggest challenges that the farmers go through is to fight insect pests during agricultural product yields. The problem can be solved easily and avoid economic losses by taking timely preventive measures. This requires identifying insect pests in an easy and effective manner. Most of the insect species have similarities between them. Without proper help from the agriculturist academician it is very challenging for the farmers to identify the crop pests accurately. To address this issue we have done extensive experiments considering different methods to find out the best method among all. This paper presents a detailed overview of the experiments done on mainly a robust dataset named IP102 including transfer learning with finetuning, attention mechanism and custom architecture. Some example from another dataset D0 is also shown to show robustness of our experimented techniques.
Unsupervised Domain Adaptation for Semantic Segmentation with Pseudo Label Self-Refinement
Authors: Xingchen Zhao, Niluthpol Chowdhury Mithun, Abhinav Rajvanshi, Han-Pang Chiu, Supun Samarasekera
Date: 2023-10-25 00:00:00
Tasks: Domain Adaptation, Pseudo Label, Semantic Segmentation, Unsupervised Domain Adaptation

Deep learning-based solutions for semantic segmentation suffer from significant performance degradation when tested on data with different characteristics than what was used during the training. Adapting the models using annotated data from the new domain is not always practical. Unsupervised Domain Adaptation (UDA) approaches are crucial in deploying these models in the actual operating conditions. Recent state-of-the-art (SOTA) UDA methods employ a teacher-student self-training approach, where a teacher model is used to generate pseudo-labels for the new data which in turn guide the training process of the student model. Though this approach has seen a lot of success, it suffers from the issue of noisy pseudo-labels being propagated in the training process. To address this issue, we propose an auxiliary pseudo-label refinement network (PRN) for online refining of the pseudo labels and also localizing the pixels whose predicted labels are likely to be noisy. Being able to improve the quality of pseudo labels and select highly reliable ones, PRN helps self-training of segmentation models to be robust against pseudo label noise propagation during different stages of adaptation. We evaluate our approach on benchmark datasets with three different domain shifts, and our approach consistently performs significantly better than the previous state-of-the-art methods.
Improving Performance in Colorectal Cancer Histology Decomposition using Deep and Ensemble Machine Learning
Authors: Fabi Prezja, Leevi Annala, Sampsa Kiiskinen, Suvi Lahtinen, Timo Ojala, Pekka Ruusuvuori, Teijo Kuopio
Date: 2023-10-25 00:00:00
Tasks: Management

In routine colorectal cancer management, histologic samples stained with hematoxylin and eosin are commonly used. Nonetheless, their potential for defining objective biomarkers for patient stratification and treatment selection is still being explored. The current gold standard relies on expensive and time-consuming genetic tests. However, recent research highlights the potential of convolutional neural networks (CNNs) in facilitating the extraction of clinically relevant biomarkers from these readily available images. These CNN-based biomarkers can predict patient outcomes comparably to golden standards, with the added advantages of speed, automation, and minimal cost. The predictive potential of CNN-based biomarkers fundamentally relies on the ability of convolutional neural networks (CNNs) to classify diverse tissue types from whole slide microscope images accurately. Consequently, enhancing the accuracy of tissue class decomposition is critical to amplifying the prognostic potential of imaging-based biomarkers. This study introduces a hybrid Deep and ensemble machine learning model that surpassed all preceding solutions for this classification task. Our model achieved 96.74% accuracy on the external test set and 99.89% on the internal test set. Recognizing the potential of these models in advancing the task, we have made them publicly available for further research and development.
Diagnosing Alzheimer's Disease using Early-Late Multimodal Data Fusion with Jacobian Maps
Authors: Yasmine Mustafa, Tie Luo
Date: 2023-10-25 00:00:00

Alzheimer's disease (AD) is a prevalent and debilitating neurodegenerative disorder impacting a large aging population. Detecting AD in all its presymptomatic and symptomatic stages is crucial for early intervention and treatment. An active research direction is to explore machine learning methods that harness multimodal data fusion to outperform human inspection of medical scans. However, existing multimodal fusion models have limitations, including redundant computation, complex architecture, and simplistic handling of missing data. Moreover, the preprocessing pipelines of medical scans remain inadequately detailed and are seldom optimized for individual subjects. In this paper, we propose an efficient early-late fusion (ELF) approach, which leverages a convolutional neural network for automated feature extraction and random forests for their competitive performance on small datasets. Additionally, we introduce a robust preprocessing pipeline that adapts to the unique characteristics of individual subjects and makes use of whole brain images rather than slices or patches. Moreover, to tackle the challenge of detecting subtle changes in brain volume, we transform images into the Jacobian domain (JD) to enhance both accuracy and robustness in our classification. Using MRI and CT images from the OASIS-3 dataset, our experiments demonstrate the effectiveness of the ELF approach in classifying AD into four stages with an accuracy of 97.19%.