pwc-archive/papers-with-abstracts huggingface dataset:
FetaFix: Automatic Fault Localization and Repair of Deep Learning Model Conversions
Authors: Nikolaos Louloudakis, Perry Gibson, José Cano, Ajitha Rajan
Date: 2023-12-22 00:00:00
Tasks: Deep Learning, Fault localization

Converting deep learning models between frameworks is a common step to maximize model compatibility across devices and leverage optimization features that may be exclusively provided in one deep learning framework. However, this conversion process may be riddled with bugs, making the converted models either undeployable or problematic, considerably degrading their prediction correctness. In this paper, we propose an automated approach for fault localization and repair, FetaFix, during model conversion between deep learning frameworks. FetaFix is capable of detecting and fixing faults introduced in model input, parameters, hyperparameters, and the model graph during conversion. FetaFix uses a set of fault types (mined from surveying common conversion issues reported in code repositories and forums) to localize potential conversion faults in the converted target model and then repair them appropriately, e.g., replacing the parameters of the target model with those from the source model. This is done iteratively for every image in the dataset, comparing output label differences between the source model and the converted target model until all differences are resolved. We evaluate the effectiveness of FetaFix in fixing model conversion bugs of three widely used image recognition models converted across four different deep learning frameworks. Overall, FetaFix was able to fix $462$ out of $755$ detected conversion faults, either completely repairing or significantly improving the performance of $14$ out of the $15$ erroneous conversion cases.
Recourse under Model Multiplicity via Argumentative Ensembling (Technical Report)
Authors: Junqi Jiang, Antonio Rago, Francesco Leofante, Francesca Toni
Date: 2023-12-22 00:00:00
Tasks: counterfactual

Model Multiplicity (MM) arises when multiple, equally performing machine learning models can be trained to solve the same prediction task. Recent studies show that models obtained under MM may produce inconsistent predictions for the same input. When this occurs, it becomes challenging to provide counterfactual explanations (CEs), a common means for offering recourse recommendations to individuals negatively affected by models' predictions. In this paper, we formalise this problem, which we name recourse-aware ensembling, and identify several desirable properties which methods for solving it should satisfy. We show that existing ensembling methods, naturally extended in different ways to provide CEs, fail to satisfy these properties. We then introduce argumentative ensembling, deploying computational argumentation to guarantee robustness of CEs to MM, while also accommodating customisable user preferences. We show theoretically and experimentally that argumentative ensembling satisfies properties which the existing methods lack, and that the trade-offs are minimal wrt accuracy.
Joint Self-Supervised and Supervised Contrastive Learning for Multimodal MRI Data: Towards Predicting Abnormal Neurodevelopment
Authors: Zhiyuan Li, Hailong Li, Anca L. Ralescu, Jonathan R. Dillman, Mekibib Altaye, Kim M. Cecil, Nehal A. Parikh, Lili He
Date: 2023-12-22 00:00:00
Tasks: Contrastive Learning

The integration of different imaging modalities, such as structural, diffusion tensor, and functional magnetic resonance imaging, with deep learning models has yielded promising outcomes in discerning phenotypic characteristics and enhancing disease diagnosis. The development of such a technique hinges on the efficient fusion of heterogeneous multimodal features, which initially reside within distinct representation spaces. Naively fusing the multimodal features does not adequately capture the complementary information and could even produce redundancy. In this work, we present a novel joint self-supervised and supervised contrastive learning method to learn the robust latent feature representation from multimodal MRI data, allowing the projection of heterogeneous features into a shared common space, and thereby amalgamating both complementary and analogous information across various modalities and among similar subjects. We performed a comparative analysis between our proposed method and alternative deep multimodal learning approaches. Through extensive experiments on two independent datasets, the results demonstrated that our method is significantly superior to several other deep multimodal learning methods in predicting abnormal neurodevelopment. Our method has the capability to facilitate computer-aided diagnosis within clinical practice, harnessing the power of multimodal data.
DynGFN: Towards Bayesian Inference of Gene Regulatory Networks with GFlowNets
Authors: Lazar Atanackovic, Alexander Tong, Bo wang, Leo J. Lee, Yoshua Bengio, Jason Hartford
Date: 2023-02-08 00:00:00
Proceeding: NeurIPS 2023 11
Tasks: Bayesian Inference, Causal Discovery

One of the grand challenges of cell biology is inferring the gene regulatory network (GRN) which describes interactions between genes and their products that control gene expression and cellular function. We can treat this as a causal discovery problem but with two non-standard challenges: (1) regulatory networks are inherently cyclic so we should not model a GRN as a directed acyclic graph (DAG), and (2) observations have significant measurement noise, so for typical sample sizes there will always be a large equivalence class of graphs that are likely given the data, and we want methods that capture this uncertainty. Existing methods either focus on challenge (1), identifying cyclic structure from dynamics, or on challenge (2) learning complex Bayesian posteriors over DAGs, but not both. In this paper we leverage the fact that it is possible to estimate the "velocity" of gene expression with RNA velocity techniques to develop an approach that addresses both challenges. Because we have access to velocity information, we can treat the Bayesian structure learning problem as a problem of sparse identification of a dynamical system, capturing cyclic feedback loops through time. Since our objective is to model uncertainty over discrete structures, we leverage Generative Flow Networks (GFlowNets) to estimate the posterior distribution over the combinatorial space of possible sparse dependencies. Our results indicate that our method learns posteriors that better encapsulate the distributions of cyclic structures compared to counterpart state-of-the-art Bayesian structure learning approaches.
Deformable 3D Gaussian Splatting for Animatable Human Avatars
Authors: HyunJun Jung, Nikolas Brasch, Jifei Song, Eduardo Perez-Pellitero, Yiren Zhou, Zhihao LI, Nassir Navab, Benjamin Busam
Date: 2023-12-22 00:00:00
Tasks: Human Animation, Novel View Synthesis

Recent advances in neural radiance fields enable novel view synthesis of photo-realistic images in dynamic settings, which can be applied to scenarios with human animation. Commonly used implicit backbones to establish accurate models, however, require many input views and additional annotations such as human masks, UV maps and depth maps. In this work, we propose ParDy-Human (Parameterized Dynamic Human Avatar), a fully explicit approach to construct a digital avatar from as little as a single monocular sequence. ParDy-Human introduces parameter-driven dynamics into 3D Gaussian Splatting where 3D Gaussians are deformed by a human pose model to animate the avatar. Our method is composed of two parts: A first module that deforms canonical 3D Gaussians according to SMPL vertices and a consecutive module that further takes their designed joint encodings and predicts per Gaussian deformations to deal with dynamics beyond SMPL vertex deformations. Images are then synthesized by a rasterizer. ParDy-Human constitutes an explicit model for realistic dynamic human avatars which requires significantly fewer training views and images. Our avatars learning is free of additional annotations such as masks and can be trained with variable backgrounds while inferring full-resolution images efficiently even on consumer hardware. We provide experimental evidence to show that ParDy-Human outperforms state-of-the-art methods on ZJU-MoCap and THUman4.0 datasets both quantitatively and visually.
Towards Detecting Cascades of Biased Medical Claims on Twitter
Authors: Libby Tiderman, Juan Sanchez Mercedes, Fiona Romanoschi, Fabricio Murai
Date: 2023-12-22 00:00:00

Social media may disseminate medical claims that highlight misleading correlations between social identifiers and diseases due to not accounting for structural determinants of health. Our research aims to identify biased medical claims on Twitter and measure their spread. We propose a machine learning framework that uses two models in tandem: RoBERTa to detect medical claims and DistilBERT to classify bias. After identifying original biased medical claims, we conducted a retweet cascade analysis, computing their individual reach and rate of spread. Tweets containing biased claims were found to circulate faster and further than unbiased claims.
Sparsity-Guided Holistic Explanation for LLMs with Interpretable Inference-Time Intervention
Authors: Zhen Tan, Tianlong Chen, Zhenyu Zhang, Huan Liu
Date: 2023-12-22 00:00:00

Large Language Models (LLMs) have achieved unprecedented breakthroughs in various natural language processing domains. However, the enigmatic ``black-box'' nature of LLMs remains a significant challenge for interpretability, hampering transparent and accountable applications. While past approaches, such as attention visualization, pivotal subnetwork extraction, and concept-based analyses, offer some insight, they often focus on either local or global explanations within a single dimension, occasionally falling short in providing comprehensive clarity. In response, we propose a novel methodology anchored in sparsity-guided techniques, aiming to provide a holistic interpretation of LLMs. Our framework, termed SparseCBM, innovatively integrates sparsity to elucidate three intertwined layers of interpretation: input, subnetwork, and concept levels. In addition, the newly introduced dimension of interpretable inference-time intervention facilitates dynamic adjustments to the model during deployment. Through rigorous empirical evaluations on real-world datasets, we demonstrate that SparseCBM delivers a profound understanding of LLM behaviors, setting it apart in both interpreting and ameliorating model inaccuracies. Codes are provided in supplements.
Assessing the Impact of Prompting Methods on ChatGPT's Mathematical Capabilities
Authors: Yuhao Chen, Chloe Wong, Hanwen Yang, Juan Aguenza, Sai Bhujangari, Benthan Vu, Xun Lei, Amisha Prasad, Manny Fluss, Eric Phuong, Minghao Liu, Raja Kumar, Vanshika Vats, James Davis
Date: 2023-12-22 00:00:00
Tasks: Chatbot, GSM8K, Language Modelling, Math, Mathematical Reasoning, MMLU, Response Generation

This study critically evaluates the efficacy of prompting methods in enhancing the mathematical reasoning capability of large language models (LLMs). The investigation uses three prescriptive prompting methods - simple, persona, and conversational prompting - known for their effectiveness in enhancing the linguistic tasks of LLMs. We conduct this analysis on OpenAI's LLM chatbot, ChatGPT-3.5, on extensive problem sets from the MATH, GSM8K, and MMLU datasets, encompassing a broad spectrum of mathematical challenges. A grading script adapted to each dataset is used to determine the effectiveness of these prompting interventions in enhancing the model's mathematical analysis power. Contrary to expectations, our empirical analysis reveals that none of the investigated methods consistently improves over ChatGPT-3.5's baseline performance, with some causing significant degradation. Our findings suggest that prompting strategies do not necessarily generalize to new domains, in this study failing to enhance mathematical performance.
C2FAR: Coarse-to-Fine Autoregressive Networks for Precise Probabilistic Forecasting
Authors: Shane Bergsma, Timothy Zeyl, Javad Rahimipour Anaraki, Lei Guo
Date: 2023-12-22 00:00:00
Tasks: Anomaly Detection, Time Series

We present coarse-to-fine autoregressive networks (C2FAR), a method for modeling the probability distribution of univariate, numeric random variables. C2FAR generates a hierarchical, coarse-to-fine discretization of a variable autoregressively; progressively finer intervals of support are generated from a sequence of binned distributions, where each distribution is conditioned on previously-generated coarser intervals. Unlike prior (flat) binned distributions, C2FAR can represent values with exponentially higher precision, for only a linear increase in complexity. We use C2FAR for probabilistic forecasting via a recurrent neural network, thus modeling time series autoregressively in both space and time. C2FAR is the first method to simultaneously handle discrete and continuous series of arbitrary scale and distribution shape. This flexibility enables a variety of time series use cases, including anomaly detection, interpolation, and compression. C2FAR achieves improvements over the state-of-the-art on several benchmark forecasting datasets.
Synthetic images aid the recognition of human-made art forgeries
Authors: Johann Ostmeyer, Ludovica Schaerf, Pavel Buividovich, Tessa Charles, Eric Postma, Carina Popovici
Date: 2023-12-22 00:00:00

Previous research has shown that Artificial Intelligence is capable of distinguishing between authentic paintings by a given artist and human-made forgeries with remarkable accuracy, provided sufficient training. However, with the limited amount of existing known forgeries, augmentation methods for forgery detection are highly desirable. In this work, we examine the potential of incorporating synthetic artworks into training datasets to enhance the performance of forgery detection. Our investigation focuses on paintings by Vincent van Gogh, for which we release the first dataset specialized for forgery detection. To reinforce our results, we conduct the same analyses on the artists Amedeo Modigliani and Raphael. We train a classifier to distinguish original artworks from forgeries. For this, we use human-made forgeries and imitations in the style of well-known artists and augment our training sets with images in a similar style generated by Stable Diffusion and StyleGAN. We find that the additional synthetic forgeries consistently improve the detection of human-made forgeries. In addition, we find that, in line with previous research, the inclusion of synthetic forgeries in the training also enables the detection of AI-generated forgeries, especially if created using a similar generator.
Bridging AI and Clinical Practice: Integrating Automated Sleep Scoring Algorithm with Uncertainty-Guided Physician Review
Authors: Michal Bechny, Giuliana Monachino, Luigi Fiorillo, Julia van der Meer, Markus H. Schmidt, Claudio L. A. Bassetti, Athina Tzovara, Francesca D. Faraci
Date: 2023-12-22 00:00:00
Tasks: Uncertainty Quantification

Purpose: This study aims to enhance the clinical use of automated sleep-scoring algorithms by incorporating an uncertainty estimation approach to efficiently assist clinicians in the manual review of predicted hypnograms, a necessity due to the notable inter-scorer variability inherent in polysomnography (PSG) databases. Our efforts target the extent of review required to achieve predefined agreement levels, examining both in-domain and out-of-domain data, and considering subjects diagnoses. Patients and methods: Total of 19578 PSGs from 13 open-access databases were used to train U-Sleep, a state-of-the-art sleep-scoring algorithm. We leveraged a comprehensive clinical database of additional 8832 PSGs, covering a full spectrum of ages and sleep-disorders, to refine the U-Sleep, and to evaluate different uncertainty-quantification approaches, including our novel confidence network. The ID data consisted of PSGs scored by over 50 physicians, and the two OOD sets comprised recordings each scored by a unique senior physician. Results: U-Sleep demonstrated robust performance, with Cohen's kappa (K) at 76.2% on ID and 73.8-78.8% on OOD data. The confidence network excelled at identifying uncertain predictions, achieving AUROC scores of 85.7% on ID and 82.5-85.6% on OOD data. Independently of sleep-disorder status, statistical evaluations revealed significant differences in confidence scores between aligning vs discording predictions, and significant correlations of confidence scores with classification performance metrics. To achieve K of at least 90% with physician intervention, examining less than 29.0% of uncertain epochs was required, substantially reducing physicians workload, and facilitating near-perfect agreement.
Learning to Prompt Knowledge Transfer for Open-World Continual Learning
Authors: Yujie Li, Xin Yang, Hao Wang, Xiangkun Wang, Tianrui Li
Date: 2023-12-22 00:00:00
Tasks: Continual Learning, Transfer Learning

This paper studies the problem of continual learning in an open-world scenario, referred to as Open-world Continual Learning (OwCL). OwCL is increasingly rising while it is highly challenging in two-fold: i) learning a sequence of tasks without forgetting knowns in the past, and ii) identifying unknowns (novel objects/classes) in the future. Existing OwCL methods suffer from the adaptability of task-aware boundaries between knowns and unknowns, and do not consider the mechanism of knowledge transfer. In this work, we propose Pro-KT, a novel prompt-enhanced knowledge transfer model for OwCL. Pro-KT includes two key components: (1) a prompt bank to encode and transfer both task-generic and task-specific knowledge, and (2) a task-aware open-set boundary to identify unknowns in the new tasks. Experimental results using two real-world datasets demonstrate that the proposed Pro-KT outperforms the state-of-the-art counterparts in both the detection of unknowns and the classification of knowns markedly.
On Quantifying Sentiments of Financial News -- Are We Doing the Right Things?
Authors: Gourab Nath, Arav Sood, Aanchal Khanna, Savi Wilson, Karan Manot, Sree Kavya Durbaka
Date: 2023-12-21 00:00:00
Tasks: Sentiment Analysis

Typical investors start off the day by going through the daily news to get an intuition about the performance of the market. The speculations based on the tone of the news ultimately shape their responses towards the market. Today, computers are being trained to compute the news sentiment so that it can be used as a variable to predict stock market movements and returns. Some researchers have even developed news-based market indices to forecast stock market returns. Majority of the research in the field of news sentiment analysis has focussed on using libraries like Vader, Loughran-McDonald (LM), Harvard IV and Pattern. However, are the popular approaches for measuring financial news sentiment really approaching the problem of sentiment analysis correctly? Our experiments suggest that measuring sentiments using these libraries, especially for financial news, fails to depict the true picture and hence may not be very reliable. Therefore, the question remains: What is the most effective and accurate approach to measure financial news sentiment? Our paper explores these questions and attempts to answer them through SENTInews: a one-of-its-kind financial news sentiment analyzer customized to the Indian context
Diffusion Models for Generative Artificial Intelligence: An Introduction for Applied Mathematicians
Authors: Catherine F. Higham, Desmond J. Higham, Peter Grindrod
Date: 2023-12-21 00:00:00

Generative artificial intelligence (AI) refers to algorithms that create synthetic but realistic output. Diffusion models currently offer state of the art performance in generative AI for images. They also form a key component in more general tools, including text-to-image generators and large language models. Diffusion models work by adding noise to the available training data and then learning how to reverse the process. The reverse operation may then be applied to new random data in order to produce new outputs. We provide a brief introduction to diffusion models for applied mathematicians and statisticians. Our key aims are (a) to present illustrative computational examples, (b) to give a careful derivation of the underlying mathematical formulas involved, and (c) to draw a connection with partial differential equation (PDE) diffusion models. We provide code for the computational experiments. We hope that this topic will be of interest to advanced undergraduate students and postgraduate students. Portions of the material may also provide useful motivational examples for those who teach courses in stochastic processes, inference, machine learning, PDEs or scientific computing.
Social-Transmotion: Promptable Human Trajectory Prediction
Authors: Saeed Saadatnejad, Yang Gao, Kaouther Messaoud, Alexandre Alahi
Date: 2023-12-26 00:00:00
Tasks: Autonomous Vehicles, Prediction, Trajectory Prediction

Accurate human trajectory prediction is crucial for applications such as autonomous vehicles, robotics, and surveillance systems. Yet, existing models often fail to fully leverage the non-verbal social cues human subconsciously communicate when navigating the space. To address this, we introduce Social-Transmotion, a generic Transformer-based model that exploits diverse and numerous visual cues to predict human behavior. We translate the idea of a prompt from Natural Language Processing (NLP) to the task of human trajectory prediction, where a prompt can be a sequence of x-y coordinates on the ground, bounding boxes in the image plane, or body pose keypoints in either 2D or 3D. This, in turn, augments trajectory data, leading to enhanced human trajectory prediction. Using masking technique, our model exhibits flexibility and adaptability by capturing spatiotemporal interactions between agents based on the available visual cues. We delve into the merits of using 2D versus 3D poses, and a limited set of poses. Additionally, we investigate the spatial and temporal attention map to identify which keypoints and time-steps in the sequence are vital for optimizing human trajectory prediction. Our approach is validated on multiple datasets, including JTA, JRDB, Pedestrians and Cyclists in Road Traffic, and ETH-UCY. The code is publicly available: https://github.com/vita-epfl/social-transmotion.
Large-scale Long-tailed Disease Diagnosis on Radiology Images
Authors: Qiaoyu Zheng, Weike Zhao, Chaoyi Wu, Xiaoman Zhang, Lisong Dai, Hengyu Guan, Yuehua Li, Ya zhang, Yanfeng Wang, Weidi Xie
Date: 2023-12-26 00:00:00
Tasks: Anatomy

Developing a generalist radiology diagnosis system can greatly enhance clinical diagnostics. In this paper, we introduce RadDiag, a foundational model supporting 2D and 3D inputs across various modalities and anatomies, using a transformer-based fusion module for comprehensive disease diagnosis. Due to patient privacy concerns and the lack of large-scale radiology diagnosis datasets, we utilize high-quality, clinician-reviewed radiological images available online with diagnosis labels. Our dataset, RP3D-DiagDS, contains 40,936 cases with 195,010 scans covering 5,568 disorders (930 unique ICD-10-CM codes). Experimentally, our RadDiag achieves 95.14% AUC on internal evaluation with the knowledge-enhancement strategy. Additionally, RadDiag can be zero-shot applied or fine-tuned to external diagnosis datasets sourced from various hospitals, demonstrating state-of-the-art results. In conclusion, we show that publicly shared medical data on the Internet is a tremendous and valuable resource that can potentially support building a generalist AI for healthcare.