pwc-archive/papers-with-abstracts huggingface dataset:
3DGAUnet: 3D generative adversarial networks with a 3D U-Net based generator to achieve the accurate and effective synthesis of clinical tumor image data for pancreatic cancer
Authors: Yu Shi, Hannah Tang, Michael Baine, Michael A. Hollingsworth, Huijing Du, Dandan Zheng, Chi Zhang, Hongfeng Yu
Date: 2023-11-09 00:00:00
Tasks: Data Augmentation, Image Generation, Medical Image Analysis

Pancreatic ductal adenocarcinoma (PDAC) presents a critical global health challenge, and early detection is crucial for improving the 5-year survival rate. Recent medical imaging and computational algorithm advances offer potential solutions for early diagnosis. Deep learning, particularly in the form of convolutional neural networks (CNNs), has demonstrated success in medical image analysis tasks, including classification and segmentation. However, the limited availability of clinical data for training purposes continues to provide a significant obstacle. Data augmentation, generative adversarial networks (GANs), and cross-validation are potential techniques to address this limitation and improve model performance, but effective solutions are still rare for 3D PDAC, where contrast is especially poor owing to the high heterogeneity in both tumor and background tissues. In this study, we developed a new GAN-based model, named 3DGAUnet, for generating realistic 3D CT images of PDAC tumors and pancreatic tissue, which can generate the interslice connection data that the existing 2D CT image synthesis models lack. Our innovation is to develop a 3D U-Net architecture for the generator to improve shape and texture learning for PDAC tumors and pancreatic tissue. Our approach offers a promising path to tackle the urgent requirement for creative and synergistic methods to combat PDAC. The development of this GAN-based model has the potential to alleviate data scarcity issues, elevate the quality of synthesized data, and thereby facilitate the progression of deep learning models to enhance the accuracy and early detection of PDAC tumors, which could profoundly impact patient outcomes. Furthermore, this model has the potential to be adapted to other types of solid tumors, hence making significant contributions to the field of medical imaging in terms of image processing models.
Argumentation Element Annotation Modeling using XLNet
Authors: Christopher Ormerod, Amy Burkhardt, Mackenzie Young, Sue Lottridge
Date: 2023-11-10 00:00:00
Tasks: Language Modeling, Language Modelling

This study demonstrates the effectiveness of XLNet, a transformer-based language model, for annotating argumentative elements in persuasive essays. XLNet's architecture incorporates a recurrent mechanism that allows it to model long-term dependencies in lengthy texts. Fine-tuned XLNet models were applied to three datasets annotated with different schemes - a proprietary dataset using the Annotations for Revisions and Reflections on Writing (ARROW) scheme, the PERSUADE corpus, and the Argument Annotated Essays (AAE) dataset. The XLNet models achieved strong performance across all datasets, even surpassing human agreement levels in some cases. This shows XLNet capably handles diverse annotation schemes and lengthy essays. Comparisons between the model outputs on different datasets also revealed insights into the relationships between the annotation tags. Overall, XLNet's strong performance on modeling argumentative structures across diverse datasets highlights its suitability for providing automated feedback on essay organization.
EVORA: Deep Evidential Traversability Learning for Risk-Aware Off-Road Autonomy
Authors: Xiaoyi Cai, Siddharth Ancha, Lakshay Sharma, Philip R. Osteen, Bernadette Bucher, Stephen Phillips, Jiuguang Wang, Michael Everett, Nicholas Roy, Jonathan P. How
Date: 2023-11-10 00:00:00
Tasks: Uncertainty Quantification

Traversing terrain with good traction is crucial for achieving fast off-road navigation. Instead of manually designing costs based on terrain features, existing methods learn terrain properties directly from data via self-supervision to automatically penalize trajectories moving through undesirable terrain, but challenges remain to properly quantify and mitigate the risk due to uncertainty in learned models. To this end, this work proposes a unified framework to learn uncertainty-aware traction model and plan risk-aware trajectories. For uncertainty quantification, we efficiently model both aleatoric and epistemic uncertainty by learning discrete traction distributions and probability densities of the traction predictor's latent features. Leveraging evidential deep learning, we parameterize Dirichlet distributions with the network outputs and propose a novel uncertainty-aware squared Earth Mover's distance loss with a closed-form expression that improves learning accuracy and navigation performance. For risk-aware navigation, the proposed planner simulates state trajectories with the worst-case expected traction to handle aleatoric uncertainty, and penalizes trajectories moving through terrain with high epistemic uncertainty. Our approach is extensively validated in simulation and on wheeled and quadruped robots, showing improved navigation performance compared to methods that assume no slip, assume the expected traction, or optimize for the worst-case expected cost.
Learning material synthesis-process-structure-property relationship by data fusion: Bayesian Coregionalization N-Dimensional Piecewise Function Learning
Authors: A. Gilad Kusne, Austin McDannald, Brian DeCost
Date: 2023-11-10 00:00:00

Autonomous materials research labs require the ability to combine and learn from diverse data streams. This is especially true for learning material synthesis-process-structure-property relationships, key to accelerating materials optimization and discovery as well as accelerating mechanistic understanding. We present the Synthesis-process-structure-property relAtionship coreGionalized lEarner (SAGE) algorithm. A fully Bayesian algorithm that uses multimodal coregionalization to merge knowledge across data sources to learn synthesis-process-structure-property relationships. SAGE outputs a probabilistic posterior for the relationships including the most likely relationships given the data.
Does Differential Privacy Prevent Backdoor Attacks in Practice?
Authors: Fereshteh Razmi, Jian Lou, Li Xiong
Date: 2023-11-10 00:00:00

Differential Privacy (DP) was originally developed to protect privacy. However, it has recently been utilized to secure machine learning (ML) models from poisoning attacks, with DP-SGD receiving substantial attention. Nevertheless, a thorough investigation is required to assess the effectiveness of different DP techniques in preventing backdoor attacks in practice. In this paper, we investigate the effectiveness of DP-SGD and, for the first time in literature, examine PATE in the context of backdoor attacks. We also explore the role of different components of DP algorithms in defending against backdoor attacks and will show that PATE is effective against these attacks due to the bagging structure of the teacher models it employs. Our experiments reveal that hyperparameters and the number of backdoors in the training dataset impact the success of DP algorithms. Additionally, we propose Label-DP as a faster and more accurate alternative to DP-SGD and PATE. We conclude that while Label-DP algorithms generally offer weaker privacy protection, accurate hyper-parameter tuning can make them more effective than DP methods in defending against backdoor attacks while maintaining model accuracy.
Differentiable VQ-VAE's for Robust White Matter Streamline Encodings
Authors: Andrew Lizarraga, Brandon Taraku, Edouardo Honig, Ying Nian Wu, Shantanu H. Joshi
Date: 2023-11-10 00:00:00
Tasks: Dimensionality Reduction

Given the complex geometry of white matter streamlines, Autoencoders have been proposed as a dimension-reduction tool to simplify the analysis streamlines in a low-dimensional latent spaces. However, despite these recent successes, the majority of encoder architectures only perform dimension reduction on single streamlines as opposed to a full bundle of streamlines. This is a severe limitation of the encoder architecture that completely disregards the global geometric structure of streamlines at the expense of individual fibers. Moreover, the latent space may not be well structured which leads to doubt into their interpretability. In this paper we propose a novel Differentiable Vector Quantized Variational Autoencoder, which are engineered to ingest entire bundles of streamlines as single data-point and provides reliable trustworthy encodings that can then be later used to analyze streamlines in the latent space. Comparisons with several state of the art Autoencoders demonstrate superior performance in both encoding and synthesis.
Optimal Cooperative Multiplayer Learning Bandits with Noisy Rewards and No Communication
Authors: William Chang, Yuanhao Lu
Date: 2023-11-10 00:00:00

We consider a cooperative multiplayer bandit learning problem where the players are only allowed to agree on a strategy beforehand, but cannot communicate during the learning process. In this problem, each player simultaneously selects an action. Based on the actions selected by all players, the team of players receives a reward. The actions of all the players are commonly observed. However, each player receives a noisy version of the reward which cannot be shared with other players. Since players receive potentially different rewards, there is an asymmetry in the information used to select their actions. In this paper, we provide an algorithm based on upper and lower confidence bounds that the players can use to select their optimal actions despite the asymmetry in the reward information. We show that this algorithm can achieve logarithmic $O(\frac{\log T}{\Delta_{\bm{a}}})$ (gap-dependent) regret as well as $O(\sqrt{T\log T})$ (gap-independent) regret. This is asymptotically optimal in $T$. We also show that it performs empirically better than the current state of the art algorithm for this environment.
Time Scale Network: A Shallow Neural Network For Time Series Data
Authors: Trevor Meyer, Camden Shultz, Najim Dehak, Laureano Moro-Velazquez, Pedro Irazoqui
Date: 2023-11-10 00:00:00
Tasks: EEG, Seizure prediction, Time Series, Time Series Analysis, Translation

Time series data is often composed of information at multiple time scales, particularly in biomedical data. While numerous deep learning strategies exist to capture this information, many make networks larger, require more data, are more demanding to compute, and are difficult to interpret. This limits their usefulness in real-world applications facing even modest computational or data constraints and can further complicate their translation into practice. We present a minimal, computationally efficient Time Scale Network combining the translation and dilation sequence used in discrete wavelet transforms with traditional convolutional neural networks and back-propagation. The network simultaneously learns features at many time scales for sequence classification with significantly reduced parameters and operations. We demonstrate advantages in Atrial Dysfunction detection including: superior accuracy-per-parameter and accuracy-per-operation, fast training and inference speeds, and visualization and interpretation of learned patterns in atrial dysfunction detection on ECG signals. We also demonstrate impressive performance in seizure prediction using EEG signals. Our network isolated a few time scales that could be strategically selected to achieve 90.9% accuracy using only 1,133 active parameters and consistently converged on pulsatile waveform shapes. This method does not rest on any constraints or assumptions regarding signal content and could be leveraged in any area of time series analysis dealing with signals containing features at many time scales.
GRAM: An Interpretable Approach for Graph Anomaly Detection using Gradient Attention Maps
Authors: Yifei Yang, Peng Wang, Xiaofan He, Dongmian Zou
Date: 2023-11-10 00:00:00
Tasks: Anomaly Detection, Decision Making, Graph Anomaly Detection, Graph Classification

Detecting unusual patterns in graph data is a crucial task in data mining. However, existing methods face challenges in consistently achieving satisfactory performance and often lack interpretability, which hinders our understanding of anomaly detection decisions. In this paper, we propose a novel approach to graph anomaly detection that leverages the power of interpretability to enhance performance. Specifically, our method extracts an attention map derived from gradients of graph neural networks, which serves as a basis for scoring anomalies. Notably, our approach is flexible and can be used in various anomaly detection settings. In addition, we conduct theoretical analysis using synthetic data to validate our method and gain insights into its decision-making process. To demonstrate the effectiveness of our method, we extensively evaluate our approach against state-of-the-art graph anomaly detection techniques on real-world graph classification and wireless network datasets. The results consistently demonstrate the superior performance of our method compared to the baselines.
Minimum norm interpolation by perceptra: Explicit regularization and implicit bias
Date: 2023-11-10 00:00:00
Proceeding: NeurIPS 2023 11

We investigate how shallow ReLU networks interpolate between known regions. Our analysis shows that empirical risk minimizers converge to a minimum norm interpolant as the number of data points and parameters tends to infinity when a weight decay regularizer is penalized with a coefficient which vanishes at a precise rate as the network width and the number of data points grow. With and without explicit regularization, we numerically study the implicit bias of common optimization algorithms towards known minimum norm interpolants.
Turbulence Scaling from Deep Learning Diffusion Generative Models
Authors: Tim Whittaker, Romuald A. Janik, Yaron Oz
Date: 2023-11-10 00:00:00
Tasks: Deep Learning

Complex spatial and temporal structures are inherent characteristics of turbulent fluid flows and comprehending them poses a major challenge. This comprehesion necessitates an understanding of the space of turbulent fluid flow configurations. We employ a diffusion-based generative model to learn the distribution of turbulent vorticity profiles and generate snapshots of turbulent solutions to the incompressible Navier-Stokes equations. We consider the inverse cascade in two spatial dimensions and generate diverse turbulent solutions that differ from those in the training dataset. We analyze the statistical scaling properties of the new turbulent profiles, calculate their structure functions, energy power spectrum, velocity probability distribution function and moments of local energy dissipation. All the learnt scaling exponents are consistent with the expected Kolmogorov scaling. This agreement with established turbulence characteristics provides strong evidence of the model's capability to capture essential features of real-world turbulence.
An Interpretable Machine Learning Framework to Understand Bikeshare Demand before and during the COVID-19 Pandemic in New York City
Authors: Majbah Uddin, Ho-Ling Hwang, Md Sami Hasnine
Date: 2023-11-10 00:00:00
Tasks: Interpretable Machine Learning

In recent years, bikesharing systems have become increasingly popular as affordable and sustainable micromobility solutions. Advanced mathematical models such as machine learning are required to generate good forecasts for bikeshare demand. To this end, this study proposes a machine learning modeling framework to estimate hourly demand in a large-scale bikesharing system. Two Extreme Gradient Boosting models were developed: one using data from before the COVID-19 pandemic (March 2019 to February 2020) and the other using data from during the pandemic (March 2020 to February 2021). Furthermore, a model interpretation framework based on SHapley Additive exPlanations was implemented. Based on the relative importance of the explanatory variables considered in this study, share of female users and hour of day were the two most important explanatory variables in both models. However, the month variable had higher importance in the pandemic model than in the pre-pandemic model.
1-Lipschitz Neural Networks are more expressive with N-Activations
Authors: Bernd Prach, Christoph H. Lampert
Date: 2023-11-10 00:00:00

A crucial property for achieving secure, trustworthy and interpretable deep learning systems is their robustness: small changes to a system's inputs should not result in large changes to its outputs. Mathematically, this means one strives for networks with a small Lipschitz constant. Several recent works have focused on how to construct such Lipschitz networks, typically by imposing constraints on the weight matrices. In this work, we study an orthogonal aspect, namely the role of the activation function. We show that commonly used activation functions, such as MaxMin, as well as all piece-wise linear ones with two segments unnecessarily restrict the class of representable functions, even in the simplest one-dimensional setting. We furthermore introduce the new N-activation function that is provably more expressive than currently popular activation functions. We provide code at https://github.com/berndprach/NActivation.
Practical Membership Inference Attacks against Fine-tuned Large Language Models via Self-prompt Calibration
Authors: Wenjie Fu, Huandong Wang, Chen Gao, Guanghua Liu, Yong Li, Tao Jiang
Date: 2023-11-10 00:00:00
Tasks: Inference Attack, Membership Inference Attack, Memorization

Membership Inference Attacks (MIA) aim to infer whether a target data record has been utilized for model training or not. Existing MIAs designed for large language models (LLMs) can be bifurcated into two types: reference-free and reference-based attacks. Although reference-based attacks appear promising performance by calibrating the probability measured on the target model with reference models, this illusion of privacy risk heavily depends on a reference dataset that closely resembles the training set. Both two types of attacks are predicated on the hypothesis that training records consistently maintain a higher probability of being sampled. However, this hypothesis heavily relies on the overfitting of target models, which will be mitigated by multiple regularization methods and the generalization of LLMs. Thus, these reasons lead to high false-positive rates of MIAs in practical scenarios. We propose a Membership Inference Attack based on Self-calibrated Probabilistic Variation (SPV-MIA). Specifically, we introduce a self-prompt approach, which constructs the dataset to fine-tune the reference model by prompting the target LLM itself. In this manner, the adversary can collect a dataset with a similar distribution from public APIs. Furthermore, we introduce probabilistic variation, a more reliable membership signal based on LLM memorization rather than overfitting, from which we rediscover the neighbour attack with theoretical grounding. Comprehensive evaluation conducted on three datasets and four exemplary LLMs shows that SPV-MIA raises the AUC of MIAs from 0.7 to a significantly high level of 0.9. Our code and dataset are available at: https://github.com/tsinghua-fib-lab/NeurIPS2024_SPV-MIA
Symbolic Regression as Feature Engineering Method for Machine and Deep Learning Regression Tasks
Authors: Assaf Shmuel, Oren Glickman, Teddy Lazebnik
Date: 2023-11-10 00:00:00
Tasks: Deep Learning, Feature Engineering, regression, Symbolic Regression

In the realm of machine and deep learning regression tasks, the role of effective feature engineering (FE) is pivotal in enhancing model performance. Traditional approaches of FE often rely on domain expertise to manually design features for machine learning models. In the context of deep learning models, the FE is embedded in the neural network's architecture, making it hard for interpretation. In this study, we propose to integrate symbolic regression (SR) as an FE process before a machine learning model to improve its performance. We show, through extensive experimentation on synthetic and real-world physics-related datasets, that the incorporation of SR-derived features significantly enhances the predictive capabilities of both machine and deep learning regression models with 34-86% root mean square error (RMSE) improvement in synthetic datasets and 4-11.5% improvement in real-world datasets. In addition, as a realistic use-case, we show the proposed method improves the machine learning performance in predicting superconducting critical temperatures based on Eliashberg theory by more than 20% in terms of RMSE. These results outline the potential of SR as an FE component in data-driven models.
Doubly Robust Structure Identification from Temporal Data
Authors: Emmanouil Angelis, Francesco Quinzan, Ashkan Soleymani, Patrick Jaillet, Stefan Bauer
Date: 2023-11-10 00:00:00
Tasks: Time Series

Learning the causes of time-series data is a fundamental task in many applications, spanning from finance to earth sciences or bio-medical applications. Common approaches for this task are based on vector auto-regression, and they do not take into account unknown confounding between potential causes. However, in settings with many potential causes and noisy data, these approaches may be substantially biased. Furthermore, potential causes may be correlated in practical applications. Moreover, existing algorithms often do not work with cyclic data. To address these challenges, we propose a new doubly robust method for Structure Identification from Temporal Data ( SITD ). We provide theoretical guarantees, showing that our method asymptotically recovers the true underlying causal structure. Our analysis extends to cases where the potential causes have cycles and they may be confounded. We further perform extensive experiments to showcase the superior performance of our method.
Sum-max Submodular Bandits
Authors: Stephen Pasteris, Alberto Rumi, Fabio Vitale, Nicolò Cesa-Bianchi
Date: 2023-11-10 00:00:00
Tasks: Decision Making

Many online decision-making problems correspond to maximizing a sequence of submodular functions. In this work, we introduce sum-max functions, a subclass of monotone submodular functions capturing several interesting problems, including best-of-$K$-bandits, combinatorial bandits, and the bandit versions on facility location, $M$-medians, and hitting sets. We show that all functions in this class satisfy a key property that we call pseudo-concavity. This allows us to prove $\big(1 - \frac{1}{e}\big)$-regret bounds for bandit feedback in the nonstochastic setting of the order of $\sqrt{MKT}$ (ignoring log factors), where $T$ is the time horizon and $M$ is a cardinality constraint. This bound, attained by a simple and efficient algorithm, significantly improves on the $\widetilde{O}\big(T^{2/3}\big)$ regret bound for online monotone submodular maximization with bandit feedback.