pwc-archive/papers-with-abstracts huggingface dataset:
Single-Read Reconstruction for DNA Data Storage Using Transformers
Authors: Yotam Nahum, Eyar Ben-Tolila, Leon Anavy
Date: 2021-09-12 00:00:00
Tasks: Language Modeling, Language Modelling

As the global need for large-scale data storage is rising exponentially, existing storage technologies are approaching their theoretical and functional limits in terms of density and energy consumption, making DNA based storage a potential solution for the future of data storage. Several studies introduced DNA based storage systems with high information density (petabytes/gram). However, DNA synthesis and sequencing technologies yield erroneous outputs. Algorithmic approaches for correcting these errors depend on reading multiple copies of each sequence and result in excessive reading costs. The unprecedented success of Transformers as a deep learning architecture for language modeling has led to its repurposing for solving a variety of tasks across various domains. In this work, we propose a novel approach for single-read reconstruction using an encoder-decoder Transformer architecture for DNA based data storage. We address the error correction process as a self-supervised sequence-to-sequence task and use synthetic noise injection to train the model using only the decoded reads. Our approach exploits the inherent redundancy of each decoded file to learn its underlying structure. To demonstrate our proposed approach, we encode text, image and code-script files to DNA, produce errors with high-fidelity error simulator, and reconstruct the original files from the noisy reads. Our model achieves lower error rates when reconstructing the original data from a single read of each DNA strand compared to state-of-the-art algorithms using 2-3 copies. This is the first demonstration of using deep learning models for single-read reconstruction in DNA based storage which allows for the reduction of the overall cost of the process. We show that this approach is applicable for various domains and can be generalized to new domains as well.
Feature Importance in Gradient Boosting Trees with Cross-Validation Feature Selection
Authors: Afek Ilay Adler, Amichai Painsky
Date: 2021-09-12 00:00:00
Tasks: Feature Importance, feature selection

Gradient Boosting Machines (GBM) are among the go-to algorithms on tabular data, which produce state of the art results in many prediction tasks. Despite its popularity, the GBM framework suffers from a fundamental flaw in its base learners. Specifically, most implementations utilize decision trees that are typically biased towards categorical variables with large cardinalities. The effect of this bias was extensively studied over the years, mostly in terms of predictive performance. In this work, we extend the scope and study the effect of biased base learners on GBM feature importance (FI) measures. We show that although these implementation demonstrate highly competitive predictive performance, they still, surprisingly, suffer from bias in FI. By utilizing cross-validated (CV) unbiased base learners, we fix this flaw at a relatively low computational cost. We demonstrate the suggested framework in a variety of synthetic and real-world setups, showing a significant improvement in all GBM FI measures while maintaining relatively the same level of prediction accuracy.
Graph Attention Network Based Single-Pixel Compressive Direction of Arrival Estimation
Authors: Kürşat Tekbıyık, Okan Yurduseven, Güneş Karabulut Kurt
Date: 2021-09-12 00:00:00
Tasks: Direction of Arrival Estimation, Graph Attention

In this paper, we present a single-pixel compressive direction of arrival (DoA) estimation technique leveraging a graph attention network (GAT)-based deep-learning framework. The physical layer compression is achieved using a coded-aperture technique, probing the spectrum of far-field sources that are incident on the aperture using a set of spatio-temporally incoherent modes. This information is then encoded and compressed into the channel of the coded-aperture. The coded-aperture is based on a metasurface antenna design and it works as a receiver, exhibiting a single-channel and replacing the conventional multichannel raster scan-based solutions for DoA estimation. The GAT network enables the compressive DoA estimation framework to learn the DoA information directly from the measurements acquired using the coded-aperture. This step eliminates the need for an additional reconstruction step and significantly simplifies the processing layer to achieve DoA estimation. We show that the presented GAT integrated single-pixel radar framework can retrieve high fidelity DoA information even under relatively low signal-to-noise ratio (SNR) levels.
Accurate Prediction Using Triangular Type-2 Fuzzy Linear Regression
Authors: Assef Zare, Afshin Shoeibi, Narges Shafaei, Parisa Moridian, Roohallah Alizadehsani, Majid Halaji, Abbas Khosravi
Date: 2021-09-12 00:00:00
Tasks: regression, Stock Prediction, Survey, Vocal Bursts Type Prediction

Many works have been done to handle the uncertainties in the data using type 1 fuzzy regression. Few type 2 fuzzy regression works used interval type 2 for indeterminate modeling using type 1 fuzzy membership. The current survey proposes a triangular type-2 fuzzy regression (TT2FR) model to ameliorate the efficiency of the model by handling the uncertainty in the data. The triangular secondary membership function is used instead of widely used interval type models. In the proposed model, vagueness in primary and secondary fuzzy sets is minimized and also, a specified x-plane of observed value is included in the same {\alpha}- plane of the predicted value. Complex calculations of the type-2 fuzzy (T2F) model are simplified by reducing three dimensional type-2 fuzzy set (3DT2FS) into two dimensional interval type-2 fuzzy (2DIT2F) models. The current survey presents a new regression model of T2F by considering the more general form of T2F membership functions and thus avoids high complexity. The performance of the developed model is evaluated using the TAIEX and COVID-19 forecasting datasets. Our developed model reached the highest performance as compared to the other state-of-art techniques. Our developed method is ready to be tested with more uncertain data and has the potential to use to predict the weather and stock prediction.
EMVLight: A Decentralized Reinforcement Learning Framework for Efficient Passage of Emergency Vehicles
Authors: Haoran Su, Yaofeng Desmond Zhong, Biswadip Dey, Amit Chakraborty
Date: 2021-09-12 00:00:00
Tasks: reinforcement-learning, Reinforcement Learning (RL), Traffic Signal Control

Emergency vehicles (EMVs) play a crucial role in responding to time-critical events such as medical emergencies and fire outbreaks in an urban area. The less time EMVs spend traveling through the traffic, the more likely it would help save people's lives and reduce property loss. To reduce the travel time of EMVs, prior work has used route optimization based on historical traffic-flow data and traffic signal pre-emption based on the optimal route. However, traffic signal pre-emption dynamically changes the traffic flow which, in turn, modifies the optimal route of an EMV. In addition, traffic signal pre-emption practices usually lead to significant disturbances in traffic flow and subsequently increase the travel time for non-EMVs. In this paper, we propose EMVLight, a decentralized reinforcement learning (RL) framework for simultaneous dynamic routing and traffic signal control. EMVLight extends Dijkstra's algorithm to efficiently update the optimal route for the EMVs in real time as it travels through the traffic network. The decentralized RL agents learn network-level cooperative traffic signal phase strategies that not only reduce EMV travel time but also reduce the average travel time of non-EMVs in the network. This benefit has been demonstrated through comprehensive experiments with synthetic and real-world maps. These experiments show that EMVLight outperforms benchmark transportation engineering techniques and existing RL-based signal control methods.
Pairwise Supervised Contrastive Learning of Sentence Representations
Authors: Dejiao Zhang, Shang-Wen Li, Wei Xiao, Henghui Zhu, Ramesh Nallapati, Andrew O. Arnold, Bing Xiang
Date: 2021-09-12 00:00:00
Proceeding: EMNLP 2021 11
Tasks: Contrastive Learning, Natural Language Inference, Representation Learning, Semantic Textual Similarity, Sentence, STS, Triplet

Many recent successes in sentence representation learning have been achieved by simply fine-tuning on the Natural Language Inference (NLI) datasets with triplet loss or siamese loss. Nevertheless, they share a common weakness: sentences in a contradiction pair are not necessarily from different semantic categories. Therefore, optimizing the semantic entailment and contradiction reasoning objective alone is inadequate to capture the high-level semantic structure. The drawback is compounded by the fact that the vanilla siamese or triplet losses only learn from individual sentence pairs or triplets, which often suffer from bad local optima. In this paper, we propose PairSupCon, an instance discrimination based approach aiming to bridge semantic entailment and contradiction understanding with high-level categorical concept encoding. We evaluate PairSupCon on various downstream tasks that involve understanding sentence semantics at different granularities. We outperform the previous state-of-the-art method with $10\%$--$13\%$ averaged improvement on eight clustering tasks, and $5\%$--$6\%$ averaged improvement on seven semantic textual similarity (STS) tasks.
Cost-Effective Federated Learning in Mobile Edge Networks
Authors: Bing Luo, Xiang Li, Shiqiang Wang, Jianwei Huang, Leandros Tassiulas
Date: 2021-09-12 00:00:00
Tasks: Federated Learning

Federated learning (FL) is a distributed learning paradigm that enables a large number of mobile devices to collaboratively learn a model under the coordination of a central server without sharing their raw data. Despite its practical efficiency and effectiveness, the iterative on-device learning process (e.g., local computations and global communications with the server) incurs a considerable cost in terms of learning time and energy consumption, which depends crucially on the number of selected clients and the number of local iterations in each training round. In this paper, we analyze how to design adaptive FL in mobile edge networks that optimally chooses these essential control variables to minimize the total cost while ensuring convergence. We establish the analytical relationship between the total cost and the control variables with the convergence upper bound. To efficiently solve the cost minimization problem, we develop a low-cost sampling-based algorithm to learn the convergence related unknown parameters. We derive important solution properties that effectively identify the design principles for different optimization metrics. Practically, we evaluate our theoretical results both in a simulated environment and on a hardware prototype. Experimental evidence verifies our derived properties and demonstrates that our proposed solution achieves near-optimal performance for different optimization metrics for various datasets and heterogeneous system and statistical settings.
On the Fundamental Limits of Matrix Completion: Leveraging Hierarchical Similarity Graphs
Authors: Junhyung Ahn, Adel Elmahdy, Soheil Mohajer, Changho Suh
Date: 2021-09-12 00:00:00
Tasks: Matrix Completion, Recommendation Systems, Stochastic Block Model

We study the matrix completion problem that leverages hierarchical similarity graphs as side information in the context of recommender systems. Under a hierarchical stochastic block model that well respects practically-relevant social graphs and a low-rank rating matrix model, we characterize the exact information-theoretic limit on the number of observed matrix entries (i.e., optimal sample complexity) by proving sharp upper and lower bounds on the sample complexity. In the achievability proof, we demonstrate that probability of error of the maximum likelihood estimator vanishes for sufficiently large number of users and items, if all sufficient conditions are satisfied. On the other hand, the converse (impossibility) proof is based on the genie-aided maximum likelihood estimator. Under each necessary condition, we present examples of a genie-aided estimator to prove that the probability of error does not vanish for sufficiently large number of users and items. One important consequence of this result is that exploiting the hierarchical structure of social graphs yields a substantial gain in sample complexity relative to the one that simply identifies different groups without resorting to the relational structure across them. More specifically, we analyze the optimal sample complexity and identify different regimes whose characteristics rely on quality metrics of side information of the hierarchical similarity graph. Finally, we present simulation results to corroborate our theoretical findings and show that the characterized information-theoretic limit can be asymptotically achieved.
Differentially Private Variable Selection via the Knockoff Filter
Authors: Mehrdad Pournaderi, Yu Xiang
Date: 2021-09-12 00:00:00
Tasks: Variable Selection

The knockoff filter, recently developed by Barber and Candes, is an effective procedure to perform variable selection with a controlled false discovery rate (FDR). We propose a private version of the knockoff filter by incorporating Gaussian and Laplace mechanisms, and show that variable selection with controlled FDR can be achieved. Simulations demonstrate that our setting has reasonable statistical power.
Gradients and Subgradients of Buffered Failure Probability
Authors: Johannes O. Royset, Ji-Eun Byun
Date: 2021-09-12 00:00:00
Tasks: Sensitivity

Gradients and subgradients are central to optimization and sensitivity analysis of buffered failure probabilities. We furnish a characterization of subgradients based on subdifferential calculus in the case of finite probability distributions and, under additional assumptions, also a gradient expression for general distributions. Several examples illustrate the application of the results, especially in the context of optimality conditions.
Omnipredictors
Authors: Parikshit Gopalan, Adam Tauman Kalai, Omer Reingold, Vatsal Sharan, Udi Wieder
Date: 2021-09-11 00:00:00
Tasks: Fairness

Loss minimization is a dominant paradigm in machine learning, where a predictor is trained to minimize some loss function that depends on an uncertain event (e.g., "will it rain tomorrow?''). Different loss functions imply different learning algorithms and, at times, very different predictors. While widespread and appealing, a clear drawback of this approach is that the loss function may not be known at the time of learning, requiring the algorithm to use a best-guess loss function. We suggest a rigorous new paradigm for loss minimization in machine learning where the loss function can be ignored at the time of learning and only be taken into account when deciding an action. We introduce the notion of an (${\mathcal{L}},\mathcal{C}$)-omnipredictor, which could be used to optimize any loss in a family ${\mathcal{L}}$. Once the loss function is set, the outputs of the predictor can be post-processed (a simple univariate data-independent transformation of individual predictions) to do well compared with any hypothesis from the class $\mathcal{C}$. The post processing is essentially what one would perform if the outputs of the predictor were true probabilities of the uncertain events. In a sense, omnipredictors extract all the predictive power from the class $\mathcal{C}$, irrespective of the loss function in $\mathcal{L}$. We show that such "loss-oblivious'' learning is feasible through a connection to multicalibration, a notion introduced in the context of algorithmic fairness. In addition, we show how multicalibration can be viewed as a solution concept for agnostic boosting, shedding new light on past results. Finally, we transfer our insights back to the context of algorithmic fairness by providing omnipredictors for multi-group loss minimization.
Structure-preserving Sparse Identification of Nonlinear Dynamics for Data-driven Modeling
Authors: Kookjin Lee, Nathaniel Trask, Panos Stinis
Date: 2021-09-11 00:00:00

Discovery of dynamical systems from data forms the foundation for data-driven modeling and recently, structure-preserving geometric perspectives have been shown to provide improved forecasting, stability, and physical realizability guarantees. We present here a unification of the Sparse Identification of Nonlinear Dynamics (SINDy) formalism with neural ordinary differential equations. The resulting framework allows learning of both "black-box" dynamics and learning of structure preserving bracket formalisms for both reversible and irreversible dynamics. We present a suite of benchmarks demonstrating effectiveness and structure preservation, including for chaotic systems.
Adaptive network reliability analysis: Methodology and applications to power grid
Authors: Nariman L. Dehghani, Soroush Zamanian, Abdollah Shafieezadeh
Date: 2021-09-11 00:00:00
Tasks: Active Learning

Flow network models can capture the underlying physics and operational constraints of many networked systems including the power grid and transportation and water networks. However, analyzing reliability of systems using computationally expensive flow-based models faces substantial challenges, especially for rare events. Existing actively trained meta-models, which present a new promising direction in reliability analysis, are not applicable to networks due to the inability of these methods to handle high-dimensional problems as well as discrete or mixed variable inputs. This study presents the first adaptive surrogate-based Network Reliability Analysis using Bayesian Additive Regression Trees (ANR-BART). This approach integrates BART and Monte Carlo simulation (MCS) via an active learning method that identifies the most valuable training samples based on the credible intervals derived by BART over the space of predictor variables as well as the proximity of the points to the estimated limit state. Benchmark power grids including IEEE 30, 57, 118, and 300-bus systems and their power flow models for cascading failure analysis are considered to investigate ANR-BART, MCS, subset simulation, and passively-trained optimal deep neural networks and BART. Results indicate that ANR-BART is robust and yields accurate estimates of network failure probability, while significantly reducing the computational cost of reliability analysis.
Remaining Useful Life Estimation of Hard Disk Drives using Bidirectional LSTM Networks
Authors: Austin Coursey, Gopal Nath, Srikanth Prabhu, Saptarshi Sengupta
Date: 2021-09-11 00:00:00

Physical and cloud storage services are well-served by functioning and reliable high-volume storage systems. Recent observations point to hard disk reliability as one of the most pressing reliability issues in data centers containing massive volumes of storage devices such as HDDs. In this regard, early detection of impending failure at the disk level aids in reducing system downtime and reduces operational loss making proactive health monitoring a priority for AIOps in such settings. In this work, we introduce methods of extracting meaningful attributes associated with operational failure and of pre-processing the highly imbalanced health statistics data for subsequent prediction tasks using data-driven approaches. We use a Bidirectional LSTM with a multi-day look back period to learn the temporal progression of health indicators and baseline them against vanilla LSTM and Random Forest models to come up with several key metrics that establish the usefulness of and superiority of our model under some tightly defined operational constraints. For example, using a 15 day look back period, our approach can predict the occurrence of disk failure with an accuracy of 96.4% considering test data 60 days before failure. This helps to alert operations maintenance well in-advance about potential mitigation needs. In addition, our model reports a mean absolute error of 0.12 for predicting failure up to 60 days in advance, placing it among the state-of-the-art in recent literature.
HyP-ABC: A Novel Automated Hyper-Parameter Tuning Algorithm Using Evolutionary Optimization
Authors: Leila Zahedi, Farid Ghareh Mohammadi, M. Hadi Amini
Date: 2021-09-11 00:00:00
Tasks: Decision Making

Machine learning techniques lend themselves as promising decision-making and analytic tools in a wide range of applications. Different ML algorithms have various hyper-parameters. In order to tailor an ML model towards a specific application, a large number of hyper-parameters should be tuned. Tuning the hyper-parameters directly affects the performance (accuracy and run-time). However, for large-scale search spaces, efficiently exploring the ample number of combinations of hyper-parameters is computationally challenging. Existing automated hyper-parameter tuning techniques suffer from high time complexity. In this paper, we propose HyP-ABC, an automatic innovative hybrid hyper-parameter optimization algorithm using the modified artificial bee colony approach, to measure the classification accuracy of three ML algorithms, namely random forest, extreme gradient boosting, and support vector machine. Compared to the state-of-the-art techniques, HyP-ABC is more efficient and has a limited number of parameters to be tuned, making it worthwhile for real-world hyper-parameter optimization problems. We further compare our proposed HyP-ABC algorithm with state-of-the-art techniques. In order to ensure the robustness of the proposed method, the algorithm takes a wide range of feasible hyper-parameter values, and is tested using a real-world educational dataset.
Bayesian Topic Regression for Causal Inference
Authors: Maximilian Ahrens, Julian Ashwin, Jan-Peter Calliess, Vu Nguyen
Date: 2021-09-11 00:00:00
Proceeding: EMNLP 2021 11
Tasks: Causal Inference, regression, Representation Learning

Causal inference using observational text data is becoming increasingly popular in many research areas. This paper presents the Bayesian Topic Regression (BTR) model that uses both text and numerical information to model an outcome variable. It allows estimation of both discrete and continuous treatment effects. Furthermore, it allows for the inclusion of additional numerical confounding factors next to text data. To this end, we combine a supervised Bayesian topic model with a Bayesian regression framework and perform supervised representation learning for the text features jointly with the regression parameter training, respecting the Frisch-Waugh-Lovell theorem. Our paper makes two main contributions. First, we provide a regression framework that allows causal inference in settings when both text and numerical confounders are of relevance. We show with synthetic and semi-synthetic datasets that our joint approach recovers ground truth with lower bias than any benchmark model, when text and numerical features are correlated. Second, experiments on two real-world datasets demonstrate that a joint and supervised learning strategy also yields superior prediction results compared to strategies that estimate regression weights for text and non-text features separately, being even competitive with more complex deep neural networks.