pwc-archive/papers-with-abstracts huggingface dataset:
A survey on deep learning approaches for breast cancer diagnosis
Authors: Timothy Kwong, Samaneh Mazaheri
Date: 2021-09-18 00:00:00
Tasks: Deep Learning, Diagnostic, Survey

Deep learning has introduced several learning-based methods to recognize breast tumours and presents high applicability in breast cancer diagnostics. It has presented itself as a practical installment in Computer-Aided Diagnostic (CAD) systems to further assist radiologists in diagnostics for different modalities. A deep learning network trained on images provided by hospitals or public databases can perform classification, detection, and segmentation of lesion types. Significant progress has been made in recognizing tumours on 2D images but recognizing 3D images remains a frontier so far. The interconnection of deep learning networks between different fields of study help propels discoveries for more efficient, accurate, and robust networks. In this review paper, the following topics will be explored: (i) theory and application of deep learning, (ii) progress of 2D, 2.5D, and 3D CNN approaches in breast tumour recognition from a performance metric perspective, and (iii) challenges faced in CNN approaches.
Domain Composition and Attention for Unseen-Domain Generalizable Medical Image Segmentation
Authors: Ran Gu, Jingyang Zhang, Rui Huang, Wenhui Lei, Guotai Wang, Shaoting Zhang
Date: 2021-09-18 00:00:00
Tasks: Domain Generalization, Image Segmentation, Medical Image Analysis, Medical Image Segmentation, Semantic Segmentation

Domain generalizable model is attracting increasing attention in medical image analysis since data is commonly acquired from different institutes with various imaging protocols and scanners. To tackle this challenging domain generalization problem, we propose a Domain Composition and Attention-based network (DCA-Net) to improve the ability of domain representation and generalization. First, we present a domain composition method that represents one certain domain by a linear combination of a set of basis representations (i.e., a representation bank). Second, a novel plug-and-play parallel domain preceptor is proposed to learn these basis representations and we introduce a divergence constraint function to encourage the basis representations to be as divergent as possible. Then, a domain attention module is proposed to learn the linear combination coefficients of the basis representations. The result of linear combination is used to calibrate the feature maps of an input image, which enables the model to generalize to different and even unseen domains. We validate our method on public prostate MRI dataset acquired from six different institutions with apparent domain shift. Experimental results show that our proposed model can generalize well on different and even unseen domains and it outperforms state-of-the-art methods on the multi-domain prostate segmentation task.
Towards High-Quality Temporal Action Detection with Sparse Proposals
Authors: Jiannan Wu, Peize Sun, Shoufa Chen, Jiewen Yang, Zihao Qi, Lan Ma, Ping Luo
Date: 2021-09-18 00:00:00
Tasks: Action Detection, Avg, Video Understanding, Vocal Bursts Intensity Prediction

Temporal Action Detection (TAD) is an essential and challenging topic in video understanding, aiming to localize the temporal segments containing human action instances and predict the action categories. The previous works greatly rely upon dense candidates either by designing varying anchors or enumerating all the combinations of boundaries on video sequences; therefore, they are related to complicated pipelines and sensitive hand-crafted designs. Recently, with the resurgence of Transformer, query-based methods have tended to become the rising solutions for their simplicity and flexibility. However, there still exists a performance gap between query-based methods and well-established methods. In this paper, we identify the main challenge lies in the large variants of action duration and the ambiguous boundaries for short action instances; nevertheless, quadratic-computational global attention prevents query-based methods to build multi-scale feature maps. Towards high-quality temporal action detection, we introduce Sparse Proposals to interact with the hierarchical features. In our method, named SP-TAD, each proposal attends to a local segment feature in the temporal feature pyramid. The local interaction enables utilization of high-resolution features to preserve action instances details. Extensive experiments demonstrate the effectiveness of our method, especially under high tIoU thresholds. E.g., we achieve the state-of-the-art performance on THUMOS14 (45.7% on mAP@0.6, 33.4% on mAP@0.7 and 53.5% on mAP@Avg) and competitive results on ActivityNet-1.3 (32.99% on mAP@Avg). Code will be made available at https://github.com/wjn922/SP-TAD.
Memory Regulation and Alignment toward Generalizer RGB-Infrared Person
Authors: Feng Chen, Fei Wu, Qi Wu, Zhiguo Wan
Date: 2021-09-18 00:00:00
Tasks: Attribute, Metric Learning, Person Re-Identification

The domain shift, coming from unneglectable modality gap and non-overlapped identity classes between training and test sets, is a major issue of RGB-Infrared person re-identification. A key to tackle the inherent issue -- domain shift -- is to enforce the data distributions of the two domains to be similar. However, RGB-IR ReID always demands discriminative features, leading to over-rely feature sensitivity of seen classes, \textit{e.g.}, via attention-based feature alignment or metric learning. Therefore, predicting the unseen query category from predefined training classes may not be accurate and leads to a sub-optimal adversarial gradient. In this paper, we uncover it in a more explainable way and propose a novel multi-granularity memory regulation and alignment module (MG-MRA) to solve this issue. By explicitly incorporating a latent variable attribute, from fine-grained to coarse semantic granularity, into intermediate features, our method could alleviate the over-confidence of the model about discriminative features of seen classes. Moreover, instead of matching discriminative features by traversing nearest neighbor, sparse attributes, \textit{i.e.}, global structural pattern, are recollected with respect to features and assigned to measure pair-wise image similarity in hashing. Extensive experiments on RegDB \cite{RegDB} and SYSU-MM01 \cite{SYSU} show the superiority of the proposed method that outperforms existing state-of-the-art methods. Our code is available in https://github.com/Chenfeng1271/MGMRA.
Self-Adaptive Partial Domain Adaptation
Authors: Jian Hu, Hongya Tuo, Shizhao Zhang, Chao Wang, Haowen Zhong, Zhikang Zou, Zhongliang Jing, Henry Leung, Ruping Zou
Date: 2021-09-18 00:00:00
Tasks: Domain Adaptation, Partial Domain Adaptation

Partial Domain adaptation (PDA) aims to solve a more practical cross-domain learning problem that assumes target label space is a subset of source label space. However, the mismatched label space causes significant negative transfer. A traditional solution is using soft weights to increase weights of source shared domain and reduce those of source outlier domain. But it still learns features of outliers and leads to negative immigration. The other mainstream idea is to distinguish source domain into shared and outlier parts by hard binary weights, while it is unavailable to correct the tangled shared and outlier classes. In this paper, we propose an end-to-end Self-Adaptive Partial Domain Adaptation(SAPDA) Network. Class weights evaluation mechanism is introduced to dynamically self-rectify the weights of shared, outlier and confused classes, thus the higher confidence samples have the more sufficient weights. Meanwhile it can eliminate the negative transfer caused by the mismatching of label space greatly. Moreover, our strategy can efficiently measure the transferability of samples in a broader sense, so that our method can achieve competitive results on unsupervised DA task likewise. A large number of experiments on multiple benchmarks have demonstrated the effectiveness of our SAPDA.
Homogeneous and Heterogeneous Relational Graph for Visible-infrared Person Re-identification
Authors: Yujian Feng, Feng Chen, Jian Yu, Yimu Ji, Fei Wu, Shangdong Liu, Xiao-Yuan Jing
Date: 2021-09-18 00:00:00
Tasks: Person Re-Identification

Visible-infrared person re-identification (VI Re-ID) aims to match person images between the visible and infrared modalities. Existing VI Re-ID methods mainly focus on extracting homogeneous structural relationships in an image, i.e. the relations between local features, while ignoring the heterogeneous correlation of local features in different modalities. The heterogeneous structured relationship is crucial to learn effective identity representations and perform cross-modality matching. In this paper, we model the homogenous structural relationship by a modality-specific graph within individual modality and then mine the heterogeneous structural correlation with the modality-specific graph of visible and infrared modality. First, the homogeneous structured graph (HOSG) mines one-vs.-rest relation between an arbitrary node (local feature) and all the rest nodes within a visible or infrared image to learn effective identity representation. Second, to find cross-modality identity-consistent correspondence, the heterogeneous graph alignment module (HGAM) further measures the relational edge strength between local node features of two modalities with routing search way. Third, we propose the cross-modality cross-correlation (CMCC) loss to extract the modality invariance of feature representations of visible and infrared graphs. CMCC computes the mutual information between modalities and expels semantic redundancy. Extensive experiments on SYSU-MM01 and RegDB datasets demonstrate that our method outperforms state-of-the-arts with a gain of 13.73\% and 9.45\% Rank1/mAP. The code is available at https://github.com/fegnyujian/Homogeneous-and-Heterogeneous-Relational-Graph.
HYouTube: Video Harmonization Dataset
Authors: Xinyuan Lu, Shengyuan Huang, Li Niu, Wenyan Cong, Liqing Zhang
Date: 2021-09-18 00:00:00
Tasks: Video Harmonization

Video composition aims to generate a composite video by combining the foreground of one video with the background of another video, but the inserted foreground may be incompatible with the background in terms of color and illumination. Video harmonization aims to adjust the foreground of a composite video to make it compatible with the background. So far, video harmonization has only received limited attention and there is no public dataset for video harmonization. In this work, we construct a new video harmonization dataset HYouTube by adjusting the foreground of real videos to create synthetic composite videos. Considering the domain gap between real composite videos and synthetic composite videos, we additionally create 100 real composite videos via copy-and-paste. Datasets are available at https://github.com/bcmi/Video-Harmonization-Dataset-HYouTube.
The Report on China-Spain Joint Clinical Testing for Rapid COVID-19 Risk Screening by Eye-region Manifestations
Authors: Yanwei Fu, Feng Li, Paula boned Fustel, Lei Zhao, Lijie Jia, Haojie Zheng, Qiang Sun, Shisong Rong, Haicheng Tang, xiangyang xue, Li Yang, Hong Li, Jiao Xie Wenxuan Wang, Yuan Li, Wei Wang, Yantao Pei, Jianmin Wang, Xiuqi Wu, Yanhua Zheng, Hongxia Tian, Mengwei Gu
Date: 2021-09-18 00:00:00
Tasks: Binary Classification, Sensitivity, Specificity

Background: The worldwide surge in coronavirus cases has led to the COVID-19 testing demand surge. Rapid, accurate, and cost-effective COVID-19 screening tests working at a population level are in imperative demand globally. Methods: Based on the eye symptoms of COVID-19, we developed and tested a COVID-19 rapid prescreening model using the eye-region images captured in China and Spain with cellphone cameras. The convolutional neural networks (CNNs)-based model was trained on these eye images to complete binary classification task of identifying the COVID-19 cases. The performance was measured using area under receiver-operating-characteristic curve (AUC), sensitivity, specificity, accuracy, and F1. The application programming interface was open access. Findings: The multicenter study included 2436 pictures corresponding to 657 subjects (155 COVID-19 infection, 23.6%) in development dataset (train and validation) and 2138 pictures corresponding to 478 subjects (64 COVID-19 infections, 13.4%) in test dataset. The image-level performance of COVID-19 prescreening model in the China-Spain multicenter study achieved an AUC of 0.913 (95% CI, 0.898-0.927), with a sensitivity of 0.695 (95% CI, 0.643-0.748), a specificity of 0.904 (95% CI, 0.891 -0.919), an accuracy of 0.875(0.861-0.889), and a F1 of 0.611(0.568-0.655). Interpretation: The CNN-based model for COVID-19 rapid prescreening has reliable specificity and sensitivity. This system provides a low-cost, fully self-performed, non-invasive, real-time feedback solution for continuous surveillance and large-scale rapid prescreening for COVID-19. Funding: This project is supported by Aimomics (Shanghai) Intelligent
Locally Weighted Mean Phase Angle (LWMPA) Based Tone Mapping Quality Index (TMQI-3)
Authors: Inaam Ul Hassan, Abdul Haseeb, Sarwan Ali
Date: 2021-09-17 00:00:00
Tasks: Tone Mapping

High Dynamic Range (HDR) images are the ones that contain a greater range of luminosity as compared to the standard images. HDR images have a higher detail and clarity of structure, objects, and color, which the standard images lack. HDR images are useful in capturing scenes that pose high brightness, darker areas, and shadows, etc. An HDR image comprises multiple narrow-range-exposure images combined into one high-quality image. As these HDR images cannot be displayed on standard display devices, the real challenge comes while converting these HDR images to Low dynamic range (LDR) images. The conversion of HDR image to LDR image is performed using Tone-mapped operators (TMOs). This conversion results in the loss of much valuable information in structure, color, naturalness, and exposures. The loss of information in the LDR image may not directly be visible to the human eye. To calculate how good an LDR image is after conversion, various metrics have been proposed previously. Some are not noise resilient, some work on separate color channels (Red, Green, and Blue one by one), and some lack capacity to identify the structure. To deal with this problem, we propose a metric in this paper called the Tone Mapping Quality Index (TMQI-3), which evaluates the quality of the LDR image based on its objective score. TMQI-3 is noise resilient, takes account of structure and naturalness, and works on all three color channels combined into one luminosity component. This eliminates the need to use multiple metrics at the same time. We compute results for several HDR and LDR images from the literature and show that our quality index metric performs better than the baseline models.
WiSoSuper: Benchmarking Super-Resolution Methods on Wind and Solar Data
Authors: Rupa Kurinchi-Vendhan, Björn Lütjens, Ritwik Gupta, Lucien Werner, Dava Newman
Date: 2021-09-17 00:00:00
Tasks: Benchmarking, BIG-bench Machine Learning, Generative Adversarial Network, Scheduling, Super-Resolution

The transition to green energy grids depends on detailed wind and solar forecasts to optimize the siting and scheduling of renewable energy generation. Operational forecasts from numerical weather prediction models, however, only have a spatial resolution of 10 to 20-km, which leads to sub-optimal usage and development of renewable energy farms. Weather scientists have been developing super-resolution methods to increase the resolution, but often rely on simple interpolation techniques or computationally expensive differential equation-based models. Recently, machine learning-based models, specifically the physics-informed resolution-enhancing generative adversarial network (PhIREGAN), have outperformed traditional downscaling methods. We provide a thorough and extensible benchmark of leading deep learning-based super-resolution techniques, including the enhanced super-resolution generative adversarial network (ESRGAN) and an enhanced deep super-resolution (EDSR) network, on wind and solar data. We accompany the benchmark with a novel public, processed, and machine learning-ready dataset for benchmarking super-resolution methods on wind and solar data.
Auto White-Balance Correction for Mixed-Illuminant Scenes
Authors: Mahmoud Afifi, Marcus A. Brubaker, Michael S. Brown
Date: 2021-09-17 00:00:00

Auto white balance (AWB) is applied by camera hardware at capture time to remove the color cast caused by the scene illumination. The vast majority of white-balance algorithms assume a single light source illuminates the scene; however, real scenes often have mixed lighting conditions. This paper presents an effective AWB method to deal with such mixed-illuminant scenes. A unique departure from conventional AWB, our method does not require illuminant estimation, as is the case in traditional camera AWB modules. Instead, our method proposes to render the captured scene with a small set of predefined white-balance settings. Given this set of rendered images, our method learns to estimate weighting maps that are used to blend the rendered images to generate the final corrected image. Through extensive experiments, we show this proposed method produces promising results compared to other alternatives for single- and mixed-illuminant scene color correction. Our source code and trained models are available at https://github.com/mahmoudnafifi/mixedillWB.
Unsupervised View-Invariant Human Posture Representation
Authors: Faegheh Sardari, Björn Ommer, Majid Mirmehdi
Date: 2021-09-17 00:00:00
Tasks: 3D Action Recognition, 3D Pose Estimation, Action Analysis, Action Assessment, Action Classification, Action Recognition, Self-Supervised Learning

Most recent view-invariant action recognition and performance assessment approaches rely on a large amount of annotated 3D skeleton data to extract view-invariant features. However, acquiring 3D skeleton data can be cumbersome, if not impractical, in in-the-wild scenarios. To overcome this problem, we present a novel unsupervised approach that learns to extract view-invariant 3D human pose representation from a 2D image without using 3D joint data. Our model is trained by exploiting the intrinsic view-invariant properties of human pose between simultaneous frames from different viewpoints and their equivariant properties between augmented frames from the same viewpoint. We evaluate the learned view-invariant pose representations for two downstream tasks. We perform comparative experiments that show improvements on the state-of-the-art unsupervised cross-view action classification accuracy on NTU RGB+D by a significant margin, on both RGB and depth images. We also show the efficiency of transferring the learned representations from NTU RGB+D to obtain the first ever unsupervised cross-view and cross-subject rank correlation results on the multi-view human movement quality dataset, QMAR, and marginally improve on the-state-of-the-art supervised results for this dataset. We also carry out ablation studies to examine the contributions of the different components of our proposed network.
ChipQA: No-Reference Video Quality Prediction via Space-Time Chips
Authors: Joshua P. Ebenezer, Zaixi Shang, Yongjun Wu, Hai Wei, Sriram Sethuraman, Alan C. Bovik
Date: 2021-09-17 00:00:00
Tasks: Video Quality Assessment, Visual Question Answering (VQA)

We propose a new model for no-reference video quality assessment (VQA). Our approach uses a new idea of highly-localized space-time (ST) slices called Space-Time Chips (ST Chips). ST Chips are localized cuts of video data along directions that \textit{implicitly} capture motion. We use perceptually-motivated bandpass and normalization models to first process the video data, and then select oriented ST Chips based on how closely they fit parametric models of natural video statistics. We show that the parameters that describe these statistics can be used to reliably predict the quality of videos, without the need for a reference video. The proposed method implicitly models ST video naturalness, and deviations from naturalness. We train and test our model on several large VQA databases, and show that our model achieves state-of-the-art performance at reduced cost, without requiring motion computation.
Primary Tumor and Inter-Organ Augmentations for Supervised Lymph Node Colon Adenocarcinoma Metastasis Detection
Authors: Apostolia Tsirikoglou, Karin Stacke, Gabriel Eilertsen, Jonas Unger
Date: 2021-09-17 00:00:00
Tasks: Data Augmentation

The scarcity of labeled data is a major bottleneck for developing accurate and robust deep learning-based models for histopathology applications. The problem is notably prominent for the task of metastasis detection in lymph nodes, due to the tissue's low tumor-to-non-tumor ratio, resulting in labor- and time-intensive annotation processes for the pathologists. This work explores alternatives on how to augment the training data for colon carcinoma metastasis detection when there is limited or no representation of the target domain. Through an exhaustive study of cross-validated experiments with limited training data availability, we evaluate both an inter-organ approach utilizing already available data for other tissues, and an intra-organ approach, utilizing the primary tumor. Both these approaches result in little to no extra annotation effort. Our results show that these data augmentation strategies can be an efficient way of increasing accuracy on metastasis detection, but fore-most increase robustness.
Self-supervised learning methods and applications in medical imaging analysis: A survey
Authors: Saeed Shurrab, Rehab Duwairi
Date: 2021-09-17 00:00:00
Tasks: Self-Supervised Learning

The scarcity of high-quality annotated medical imaging datasets is a major problem that collides with machine learning applications in the field of medical imaging analysis and impedes its advancement. Self-supervised learning is a recent training paradigm that enables learning robust representations without the need for human annotation which can be considered an effective solution for the scarcity of annotated medical data. This article reviews the state-of-the-art research directions in self-supervised learning approaches for image data with a concentration on their applications in the field of medical imaging analysis. The article covers a set of the most recent self-supervised learning methods from the computer vision field as they are applicable to the medical imaging analysis and categorize them as predictive, generative, and contrastive approaches. Moreover, the article covers 40 of the most recent research papers in the field of self-supervised learning in medical imaging analysis aiming at shedding the light on the recent innovation in the field. Finally, the article concludes with possible future research directions in the field.
Machine-learning hidden symmetries
Authors: Ziming Liu, Max Tegmark
Date: 2021-09-20 00:00:00
Tasks: BIG-bench Machine Learning

We present an automated method for finding hidden symmetries, defined as symmetries that become manifest only in a new coordinate system that must be discovered. Its core idea is to quantify asymmetry as violation of certain partial differential equations, and to numerically minimize such violation over the space of all invertible transformations, parametrized as invertible neural networks. For example, our method rediscovers the famous Gullstrand-Painleve metric that manifests hidden translational symmetry in the Schwarzschild metric of non-rotating black holes, as well as Hamiltonicity, modularity and other simplifying traits not traditionally viewed as symmetries.