pwc-archive/papers-with-abstracts huggingface dataset:
Delving into Deep Imbalanced Regression
Authors: Yuzhe Yang, Kaiwen Zha, Ying-Cong Chen, Hao Wang, Dina Katabi
Date: 2021-02-18 00:00:00
Tasks: Deep imbalanced regression, regression

Real-world data often exhibit imbalanced distributions, where certain target values have significantly fewer observations. Existing techniques for dealing with imbalanced data focus on targets with categorical indices, i.e., different classes. However, many tasks involve continuous targets, where hard boundaries between classes do not exist. We define Deep Imbalanced Regression (DIR) as learning from such imbalanced data with continuous targets, dealing with potential missing data for certain target values, and generalizing to the entire target range. Motivated by the intrinsic difference between categorical and continuous label space, we propose distribution smoothing for both labels and features, which explicitly acknowledges the effects of nearby targets, and calibrates both label and learned feature distributions. We curate and benchmark large-scale DIR datasets from common real-world tasks in computer vision, natural language processing, and healthcare domains. Extensive experiments verify the superior performance of our strategies. Our work fills the gap in benchmarks and techniques for practical imbalanced regression problems. Code and data are available at https://github.com/YyzHarry/imbalanced-regression.
A Systematic Review of Natural Language Processing Applied to Radiology Reports
Authors: Arlene Casey, Emma Davidson, Michael Poon, Hang Dong, Daniel Duma, Andreas Grivas, Claire Grover, Víctor Suárez-Paniagua, Richard Tobin, William Whiteley, Honghan Wu, Beatrice Alex
Date: 2021-02-18 00:00:00

NLP has a significant role in advancing healthcare and has been found to be key in extracting structured information from radiology reports. Understanding recent developments in NLP application to radiology is of significance but recent reviews on this are limited. This study systematically assesses recent literature in NLP applied to radiology reports. Our automated literature search yields 4,799 results using automated filtering, metadata enriching steps and citation search combined with manual review. Our analysis is based on 21 variables including radiology characteristics, NLP methodology, performance, study, and clinical application characteristics. We present a comprehensive analysis of the 164 publications retrieved with each categorised into one of 6 clinical application categories. Deep learning use increases but conventional machine learning approaches are still prevalent. Deep learning remains challenged when data is scarce and there is little evidence of adoption into clinical practice. Despite 17% of studies reporting greater than 0.85 F1 scores, it is hard to comparatively evaluate these approaches given that most of them use different datasets. Only 14 studies made their data and 15 their code available with 10 externally validating results. Automated understanding of clinical narratives of the radiology reports has the potential to enhance the healthcare process but reproducibility and explainability of models are important if the domain is to move applications into clinical use. More could be done to share code enabling validation of methods on different institutional data and to reduce heterogeneity in reporting of study properties allowing inter-study comparisons. Our results have significance for researchers providing a systematic synthesis of existing work to build on, identify gaps, opportunities for collaboration and avoid duplication.
Going Full-TILT Boogie on Document Understanding with Text-Image-Layout Transformer
Authors: Rafał Powalski, Łukasz Borchmann, Dawid Jurkiewicz, Tomasz Dwojak, Michał Pietruszka, Gabriela Pałka
Date: 2021-02-18 00:00:00
Tasks: Decoder, Document Image Classification, document understanding, Visual Question Answering, Visual Question Answering (VQA)

We address the challenging problem of Natural Language Comprehension beyond plain-text documents by introducing the TILT neural network architecture which simultaneously learns layout information, visual features, and textual semantics. Contrary to previous approaches, we rely on a decoder capable of unifying a variety of problems involving natural language. The layout is represented as an attention bias and complemented with contextualized visual information, while the core of our model is a pretrained encoder-decoder Transformer. Our novel approach achieves state-of-the-art results in extracting information from documents and answering questions which demand layout understanding (DocVQA, CORD, SROIE). At the same time, we simplify the process by employing an end-to-end model.
Deep Gait Recognition: A Survey
Authors: Alireza Sepas-Moghaddam, Ali Etemad
Date: 2021-02-18 00:00:00
Tasks: Deep Learning, Gait Recognition, Survey

Gait recognition is an appealing biometric modality which aims to identify individuals based on the way they walk. Deep learning has reshaped the research landscape in this area since 2015 through the ability to automatically learn discriminative representations. Gait recognition methods based on deep learning now dominate the state-of-the-art in the field and have fostered real-world applications. In this paper, we present a comprehensive overview of breakthroughs and recent developments in gait recognition with deep learning, and cover broad topics including datasets, test protocols, state-of-the-art solutions, challenges, and future research directions. We first review the commonly used gait datasets along with the principles designed for evaluating them. We then propose a novel taxonomy made up of four separate dimensions namely body representation, temporal representation, feature representation, and neural architecture, to help characterize and organize the research landscape and literature in this area. Following our proposed taxonomy, a comprehensive survey of gait recognition methods using deep learning is presented with discussions on their performances, characteristics, advantages, and limitations. We conclude this survey with a discussion on current challenges and mention a number of promising directions for future research in gait recognition.
Combinatorial optimization and reasoning with graph neural networks
Authors: Quentin Cappart, Didier Chételat, Elias Khalil, Andrea Lodi, Christopher Morris, Petar Veličković
Date: 2021-02-18 00:00:00
Tasks: BIG-bench Machine Learning, Combinatorial Optimization, Inductive Bias

Combinatorial optimization is a well-established area in operations research and computer science. Until recently, its methods have focused on solving problem instances in isolation, ignoring that they often stem from related data distributions in practice. However, recent years have seen a surge of interest in using machine learning, especially graph neural networks (GNNs), as a key building block for combinatorial tasks, either directly as solvers or by enhancing exact solvers. The inductive bias of GNNs effectively encodes combinatorial and relational input due to their invariance to permutations and awareness of input sparsity. This paper presents a conceptual review of recent key advancements in this emerging field, aiming at optimization and machine learning researchers.
SLAKE: A Semantically-Labeled Knowledge-Enhanced Dataset for Medical Visual Question Answering
Authors: Bo Liu, Li-Ming Zhan, Li Xu, Lin Ma, Yan Yang, Xiao-Ming Wu
Date: 2021-02-18 00:00:00
Tasks: Medical Visual Question Answering, Question Answering, Visual Question Answering, Visual Question Answering (VQA)

Medical visual question answering (Med-VQA) has tremendous potential in healthcare. However, the development of this technology is hindered by the lacking of publicly-available and high-quality labeled datasets for training and evaluation. In this paper, we present a large bilingual dataset, SLAKE, with comprehensive semantic labels annotated by experienced physicians and a new structural medical knowledge base for Med-VQA. Besides, SLAKE includes richer modalities and covers more human body parts than the currently available dataset. We show that SLAKE can be used to facilitate the development and evaluation of Med-VQA systems. The dataset can be downloaded from http://www.med-vqa.com/slake.
Off-policy Confidence Sequences
Authors: Nikos Karampatziakis, Paul Mineiro, Aaditya Ramdas
Date: 2021-02-18 00:00:00
Tasks: Off-policy evaluation, valid

We develop confidence bounds that hold uniformly over time for off-policy evaluation in the contextual bandit setting. These confidence sequences are based on recent ideas from martingale analysis and are non-asymptotic, non-parametric, and valid at arbitrary stopping times. We provide algorithms for computing these confidence sequences that strike a good balance between computational and statistical efficiency. We empirically demonstrate the tightness of our approach in terms of failure probability and width and apply it to the "gated deployment" problem of safely upgrading a production contextual bandit system.
iX-BSP: Incremental Belief Space Planning
Authors: Elad I. Farhi, Vadim Indelman
Date: 2021-02-18 00:00:00

Deciding what's next? is a fundamental problem in robotics and Artificial Intelligence. Under belief space planning (BSP), in a partially observable setting, it involves calculating the expected accumulated belief-dependent reward, where the expectation is with respect to all future measurements. Since solving this general un-approximated problem quickly becomes intractable, state of the art approaches turn to approximations while still calculating planning sessions from scratch. In this work we propose a novel paradigm, Incremental BSP (iX-BSP), based on the key insight that calculations across planning sessions are similar in nature and can be appropriately re-used. We calculate the expectation incrementally by utilizing Multiple Importance Sampling techniques for selective re-sampling and re-use of measurement from previous planning sessions. The formulation of our approach considers general distributions and accounts for data association aspects. We demonstrate how iX-BSP could benefit existing approximations of the general problem, introducing iML-BSP, which re-uses calculations across planning sessions under the common Maximum Likelihood assumption. We evaluate both methods and demonstrate a substantial reduction in computation time while statistically preserving accuracy. The evaluation includes both simulation and real-world experiments considering autonomous vision-based navigation and SLAM. As a further contribution, we introduce to iX-BSP the non-integral wildfire approximation, allowing one to trade accuracy for computational performance by averting from updating re-used beliefs when they are "close enough". We evaluate iX-BSP under wildfire demonstrating a substantial reduction in computation time while controlling the accuracy sacrifice. We also provide analytical and empirical bounds of the effect wildfire holds over the objective value.
Clockwork Variational Autoencoders
Authors: Vaibhav Saxena, Jimmy Ba, Danijar Hafner
Date: 2021-02-18 00:00:00
Proceeding: NeurIPS 2021 12
Tasks: Minecraft, Prediction, Video Prediction

Deep learning has enabled algorithms to generate realistic images. However, accurately predicting long video sequences requires understanding long-term dependencies and remains an open challenge. While existing video prediction models succeed at generating sharp images, they tend to fail at accurately predicting far into the future. We introduce the Clockwork VAE (CW-VAE), a video prediction model that leverages a hierarchy of latent sequences, where higher levels tick at slower intervals. We demonstrate the benefits of both hierarchical latents and temporal abstraction on 4 diverse video prediction datasets with sequences of up to 1000 frames, where CW-VAE outperforms top video prediction models. Additionally, we propose a Minecraft benchmark for long-term video prediction. We conduct several experiments to gain insights into CW-VAE and confirm that slower levels learn to represent objects that change more slowly in the video, and faster levels learn to represent faster objects.
Fuzzy clustering algorithms with distance metric learning and entropy regularization
Authors: Sara Ines Rizo Rodriguez, Francisco de Assis Tenorio de Carvalho
Date: 2021-02-18 00:00:00
Tasks: Clustering, Metric Learning

The clustering methods have been used in a variety of fields such as image processing, data mining, pattern recognition, and statistical analysis. Generally, the clustering algorithms consider all variables equally relevant or not correlated for the clustering task. Nevertheless, in real situations, some variables can be correlated or may be more or less relevant or even irrelevant for this task. This paper proposes partitioning fuzzy clustering algorithms based on Euclidean, City-block and Mahalanobis distances and entropy regularization. These methods are an iterative three steps algorithms which provide a fuzzy partition, a representative for each fuzzy cluster, and the relevance weight of the variables or their correlation by minimizing a suitable objective function. Several experiments on synthetic and real datasets, including its application to noisy image texture segmentation, demonstrate the usefulness of these adaptive clustering methods.
Image Compositing for Segmentation of Surgical Tools without Manual Annotations
Authors: Luis C. Garcia-Peraza-Herrera, Lucas Fidon, Claudia D'Ettorre, Danail Stoyanov, Tom Vercauteren, Sebastien Ourselin
Date: 2021-02-18 00:00:00
Tasks: Data Augmentation, Image Segmentation, Semantic Segmentation

Producing manual, pixel-accurate, image segmentation labels is tedious and time-consuming. This is often a rate-limiting factor when large amounts of labeled images are required, such as for training deep convolutional networks for instrument-background segmentation in surgical scenes. No large datasets comparable to industry standards in the computer vision community are available for this task. To circumvent this problem, we propose to automate the creation of a realistic training dataset by exploiting techniques stemming from special effects and harnessing them to target training performance rather than visual appeal. Foreground data is captured by placing sample surgical instruments over a chroma key (a.k.a. green screen) in a controlled environment, thereby making extraction of the relevant image segment straightforward. Multiple lighting conditions and viewpoints can be captured and introduced in the simulation by moving the instruments and camera and modulating the light source. Background data is captured by collecting videos that do not contain instruments. In the absence of pre-existing instrument-free background videos, minimal labeling effort is required, just to select frames that do not contain surgical instruments from videos of surgical interventions freely available online. We compare different methods to blend instruments over tissue and propose a novel data augmentation approach that takes advantage of the plurality of options. We show that by training a vanilla U-Net on semi-synthetic data only and applying a simple post-processing, we are able to match the results of the same network trained on a publicly available manually labeled real dataset.
Vision-Aided 6G Wireless Communications: Blockage Prediction and Proactive Handoff
Authors: Gouranga Charan, Muhammad Alrabeiah, Ahmed Alkhateeb
Date: 2021-02-18 00:00:00

The sensitivity to blockages is a key challenge for the high-frequency (5G millimeter wave and 6G sub-terahertz) wireless networks. Since these networks mainly rely on line-of-sight (LOS) links, sudden link blockages highly threaten the reliability of the networks. Further, when the LOS link is blocked, the network typically needs to hand off the user to another LOS basestation, which may incur critical time latency, especially if a search over a large codebook of narrow beams is needed. A promising way to tackle the reliability and latency challenges lies in enabling proaction in wireless networks. Proaction basically allows the network to anticipate blockages, especially dynamic blockages, and initiate user hand-off beforehand. This paper presents a complete machine learning framework for enabling proaction in wireless networks relying on visual data captured, for example, by RGB cameras deployed at the base stations. In particular, the paper proposes a vision-aided wireless communication solution that utilizes bimodal machine learning to perform proactive blockage prediction and user hand-off. The bedrock of this solution is a deep learning algorithm that learns from visual and wireless data how to predict incoming blockages. The predictions of this algorithm are used by the wireless network to proactively initiate hand-off decisions and avoid any unnecessary latency. The algorithm is developed on a vision-wireless dataset generated using the ViWi data-generation framework. Experimental results on two basestations with different cameras indicate that the algorithm is capable of accurately detecting incoming blockages more than $\sim 90\%$ of the time. Such blockage prediction ability is directly reflected in the accuracy of proactive hand-off, which also approaches $87\%$. This highlights a promising direction for enabling high reliability and low latency in future wireless networks.
Convex regularization in statistical inverse learning problems
Authors: Tatiana A. Bubba, Martin Burger, Tapio Helin, Luca Ratti
Date: 2021-02-18 00:00:00

We consider a statistical inverse learning problem, where the task is to estimate a function $f$ based on noisy point evaluations of $Af$, where $A$ is a linear operator. The function $Af$ is evaluated at i.i.d. random design points $u_n$, $n=1,...,N$ generated by an unknown general probability distribution. We consider Tikhonov regularization with general convex and $p$-homogeneous penalty functionals and derive concentration rates of the regularized solution to the ground truth measured in the symmetric Bregman distance induced by the penalty functional. We derive concrete rates for Besov norm penalties and numerically demonstrate the correspondence with the observed rates in the context of X-ray tomography.
Essentials for Class Incremental Learning
Authors: Sudhanshu Mittal, Silvio Galesso, Thomas Brox
Date: 2021-02-18 00:00:00
Tasks: class-incremental learning, Class Incremental Learning, Continual Learning, Incremental Learning

Contemporary neural networks are limited in their ability to learn from evolving streams of training data. When trained sequentially on new or evolving tasks, their accuracy drops sharply, making them unsuitable for many real-world applications. In this work, we shed light on the causes of this well-known yet unsolved phenomenon - often referred to as catastrophic forgetting - in a class-incremental setup. We show that a combination of simple components and a loss that balances intra-task and inter-task learning can already resolve forgetting to the same extent as more complex measures proposed in literature. Moreover, we identify poor quality of the learned representation as another reason for catastrophic forgetting in class-IL. We show that performance is correlated with secondary class information (dark knowledge) learned by the model and it can be improved by an appropriate regularizer. With these lessons learned, class-incremental learning results on CIFAR-100 and ImageNet improve over the state-of-the-art by a large margin, while keeping the approach simple.
Domain Adaptation for Medical Image Analysis: A Survey
Authors: Hao Guan, Mingxia Liu
Date: 2021-02-18 00:00:00
Tasks: Domain Adaptation, Medical Image Analysis, Survey

Machine learning techniques used in computer-aided medical image analysis usually suffer from the domain shift problem caused by different distributions between source/reference data and target data. As a promising solution, domain adaptation has attracted considerable attention in recent years. The aim of this paper is to survey the recent advances of domain adaptation methods in medical image analysis. We first present the motivation of introducing domain adaptation techniques to tackle domain heterogeneity issues for medical image analysis. Then we provide a review of recent domain adaptation models in various medical image analysis tasks. We categorize the existing methods into shallow and deep models, and each of them is further divided into supervised, semi-supervised and unsupervised methods. We also provide a brief summary of the benchmark medical image datasets that support current domain adaptation research. This survey will enable researchers to gain a better understanding of the current status, challenges.
Regular Expressions for Fast-response COVID-19 Text Classification
Authors: Igor L. Markov, Jacqueline Liu, Adam Vagner
Date: 2021-02-18 00:00:00
Tasks: Classification, General Classification, text-classification, Text Classification

Text classifiers are at the core of many NLP applications and use a variety of algorithmic approaches and software. This paper introduces infrastructure and methodologies for text classifiers based on large-scale regular expressions. In particular, we describe how Facebook determines if a given piece of text - anything from a hashtag to a post - belongs to a narrow topic such as COVID-19. To fully define a topic and evaluate classifier performance we employ human-guided iterations of keyword discovery, but do not require labeled data. For COVID-19, we build two sets of regular expressions: (1) for 66 languages, with 99% precision and recall >50%, (2) for the 11 most common languages, with precision >90% and recall >90%. Regular expressions enable low-latency queries from multiple platforms. Response to challenges like COVID-19 is fast and so are revisions. Comparisons to a DNN classifier show explainable results, higher precision and recall, and less overfitting. Our learnings can be applied to other narrow-topic classifiers.
Transfer Learning for Linear Regression: a Statistical Test of Gain
Authors: David Obst, Badih Ghattas, Jairo Cugliari, Georges Oppenheim, Sandra Claudel, Yannig Goude
Date: 2021-02-18 00:00:00
Tasks: regression, Transfer Learning

Transfer learning, also referred as knowledge transfer, aims at reusing knowledge from a source dataset to a similar target one. While many empirical studies illustrate the benefits of transfer learning, few theoretical results are established especially for regression problems. In this paper a theoretical framework for the problem of parameter transfer for the linear model is proposed. It is shown that the quality of transfer for a new input vector $x$ depends on its representation in an eigenbasis involving the parameters of the problem. Furthermore a statistical test is constructed to predict whether a fine-tuned model has a lower prediction quadratic risk than the base target model for an unobserved sample. Efficiency of the test is illustrated on synthetic data as well as real electricity consumption data.
Inferring Graph Signal Translations as Invariant Transformations for Classification Tasks
Authors: Raphael Baena, Lucas Drumetz, Vincent Gripon
Date: 2021-02-18 00:00:00
Tasks: Classification, General Classification

The field of Graph Signal Processing (GSP) has proposed tools to generalize harmonic analysis to complex domains represented through graphs. Among these tools are translations, which are required to define many others. Most works propose to define translations using solely the graph structure (i.e. edges). Such a problem is ill-posed in general as a graph conveys information about neighborhood but not about directions. In this paper, we propose to infer translations as edge-constrained operations that make a supervised classification problem invariant using a deep learning framework. As such, our methodology uses both the graph structure and labeled signals to infer translations. We perform experiments with regular 2D images and abstract hyperlink networks to show the effectiveness of the proposed methodology in inferring meaningful translations for signals supported on graphs.