pwc-archive/papers-with-abstracts huggingface dataset:
Gray Matter Segmentation in Ultra High Resolution 7 Tesla ex vivo T2w MRI of Human Brain Hemispheres
Authors: Pulkit Khandelwal, Shokufeh Sadaghiani, Michael Tran Duong, Sadhana Ravikumar, Sydney Lim, Sanaz Arezoumandan, Claire Peterson, Eunice Chung, Madigan Bedard, Noah Capp, Ranjit Ittyerah, Elyse Migdal, Grace Choi, Emily Kopp, Bridget Loja, Eusha Hasan, Jiacheng Li, Karthik Prabhakaran, Gabor Mizsei, Marianna Gabrielyan, Theresa Schuck, John Robinson, Daniel Ohm, Edward Lee, John Q. Trojanowski, Corey McMillan, Murray Grossman, David Irwin, M. Dylan Tisdall, Sandhitsu R. Das, Laura E. M. Wisse, David A. Wolk, Paul A. Yushkevich
Date: 2021-10-14 00:00:00
Tasks: Segmentation

Ex vivo MRI of the brain provides remarkable advantages over in vivo MRI for visualizing and characterizing detailed neuroanatomy. However, automated cortical segmentation methods in ex vivo MRI are not well developed, primarily due to limited availability of labeled datasets, and heterogeneity in scanner hardware and acquisition protocols. In this work, we present a high resolution 7 Tesla dataset of 32 ex vivo human brain specimens. We benchmark the cortical mantle segmentation performance of nine neural network architectures, trained and evaluated using manually-segmented 3D patches sampled from specific cortical regions, and show excellent generalizing capabilities across whole brain hemispheres in different specimens, and also on unseen images acquired at different magnetic field strength and imaging sequences. Finally, we provide cortical thickness measurements across key regions in 3D ex vivo human brain images. Our code and processed datasets are publicly available at https://github.com/Pulkit-Khandelwal/picsl-ex-vivo-segmentation.
Few-Shot Bot: Prompt-Based Learning for Dialogue Systems
Authors: Andrea Madotto, Zhaojiang Lin, Genta Indra Winata, Pascale Fung
Date: 2021-10-15 00:00:00
Tasks: Chatbot, Dialogue State Tracking, Few-Shot Learning, Response Generation, Retrieval

Learning to converse using only a few examples is a great challenge in conversational AI. The current best conversational models, which are either good chit-chatters (e.g., BlenderBot) or goal-oriented systems (e.g., MinTL), are language models (LMs) fine-tuned on large conversational datasets. Training these models is expensive, both in terms of computational resources and time, and it is hard to keep them up to date with new conversational skills. A simple yet unexplored solution is prompt-based few-shot learning (Brown et al. 2020) which does not require gradient-based fine-tuning but instead uses a few examples in the LM context as the only source of learning. In this paper, we explore prompt-based few-shot learning in dialogue tasks. We benchmark LMs of different sizes in nine response generation tasks, which include four knowledge-grounded tasks, a task-oriented generations task, three open-chat tasks, and controlled stylistic generation, and five conversational parsing tasks, which include dialogue state tracking, graph path generation, persona information extraction, document retrieval, and internet query generation. The current largest released LM (GPT-J-6B) using prompt-based few-shot learning, and thus requiring no training, achieves competitive performance to fully trained state-of-the-art models. Moreover, we propose a novel prompt-based few-shot classifier, that also does not require any fine-tuning, to select the most appropriate prompt given a dialogue history. Finally, by combining the power of prompt-based few-shot learning and a Skill Selector, we create an end-to-end chatbot named the Few-Shot Bot (FSB), which automatically selects the most appropriate conversational skill, queries different knowledge bases or the internet, and uses the retrieved knowledge to generate a human-like response, all using only few dialogue examples per skill.
Pre-training Molecular Graph Representation with 3D Geometry
Authors: Shengchao Liu, Hanchen Wang, Weiyang Liu, Joan Lasenby, Hongyu Guo, Jian Tang
Date: 2021-10-07 00:00:00
Proceeding: ICLR 2022 4
Tasks: 3D geometry, Graph Representation Learning, Representation Learning, Self-Supervised Learning

Molecular graph representation learning is a fundamental problem in modern drug and material discovery. Molecular graphs are typically modeled by their 2D topological structures, but it has been recently discovered that 3D geometric information plays a more vital role in predicting molecular functionalities. However, the lack of 3D information in real-world scenarios has significantly impeded the learning of geometric graph representation. To cope with this challenge, we propose the Graph Multi-View Pre-training (GraphMVP) framework where self-supervised learning (SSL) is performed by leveraging the correspondence and consistency between 2D topological structures and 3D geometric views. GraphMVP effectively learns a 2D molecular graph encoder that is enhanced by richer and more discriminative 3D geometry. We further provide theoretical insights to justify the effectiveness of GraphMVP. Finally, comprehensive experiments show that GraphMVP can consistently outperform existing graph SSL methods.
Benchmark Problems for CEC2021 Competition on Evolutionary Transfer Multiobjectve Optimization
Authors: Songbai Liu, Qiuzhen Lin, Kay Chen Tan, Qing Li
Date: 2021-10-15 00:00:00
Tasks: Multiobjective Optimization, Transfer Learning

Evolutionary transfer multiobjective optimization (ETMO) has been becoming a hot research topic in the field of evolutionary computation, which is based on the fact that knowledge learning and transfer across the related optimization exercises can improve the efficiency of others. Besides, the potential for transfer optimization is deemed invaluable from the standpoint of human-like problem-solving capabilities where knowledge gather and reuse are instinctive. To promote the research on ETMO, benchmark problems are of great importance to ETMO algorithm analysis, which helps designers or practitioners to understand the merit and demerit better of ETMO algorithms. Therefore, a total number of 40 benchmark functions are proposed in this report, covering diverse types and properties in the case of knowledge transfer, such as various formulation models, various PS geometries and PF shapes, large-scale of variables, dynamically changed environment, and so on. All the benchmark functions have been implemented in JAVA code, which can be downloaded on the following website: https://github.com/songbai-liu/etmo.
Textual Backdoor Attacks Can Be More Harmful via Two Simple Tricks
Authors: Yangyi Chen, Fanchao Qi, Hongcheng Gao, Zhiyuan Liu, Maosong Sun
Date: 2021-10-15 00:00:00
Tasks: Vocal Bursts Valence Prediction

Backdoor attacks are a kind of emergent security threat in deep learning. After being injected with a backdoor, a deep neural model will behave normally on standard inputs but give adversary-specified predictions once the input contains specific backdoor triggers. In this paper, we find two simple tricks that can make existing textual backdoor attacks much more harmful. The first trick is to add an extra training task to distinguish poisoned and clean data during the training of the victim model, and the second one is to use all the clean training data rather than remove the original clean data corresponding to the poisoned data. These two tricks are universally applicable to different attack models. We conduct experiments in three tough situations including clean data fine-tuning, low-poisoning-rate, and label-consistent attacks. Experimental results show that the two tricks can significantly improve attack performance. This paper exhibits the great potential harmfulness of backdoor attacks. All the code and data can be obtained at \url{https://github.com/thunlp/StyleAttack}.
Rule Induction in Knowledge Graphs Using Linear Programming
Authors: Sanjeeb Dash, Joao Goncalves
Date: 2021-10-15 00:00:00
Tasks: Knowledge Graphs

We present a simple linear programming (LP) based method to learn compact and interpretable sets of rules encoding the facts in a knowledge graph (KG) and use these rules to solve the KG completion problem. Our LP model chooses a set of rules of bounded complexity from a list of candidate first-order logic rules and assigns weights to them. The complexity bound is enforced via explicit constraints. We combine simple rule generation heuristics with our rule selection LP to obtain predictions with accuracy comparable to state-of-the-art codes, even while generating much more compact rule sets. Furthermore, when we take as input rules generated by other codes, we often improve interpretability by reducing the number of chosen rules, while maintaining accuracy.
Cross-Domain Data Integration for Named Entity Disambiguation in Biomedical Text
Authors: Maya Varma, Laurel Orr, Sen Wu, Megan Leszczynski, Xiao Ling, Christopher Ré
Date: 2021-10-15 00:00:00
Proceeding: Findings (EMNLP) 2021 11
Tasks: Data Integration, Entity Disambiguation

Named entity disambiguation (NED), which involves mapping textual mentions to structured entities, is particularly challenging in the medical domain due to the presence of rare entities. Existing approaches are limited by the presence of coarse-grained structural resources in biomedical knowledge bases as well as the use of training datasets that provide low coverage over uncommon resources. In this work, we address these issues by proposing a cross-domain data integration method that transfers structural knowledge from a general text knowledge base to the medical domain. We utilize our integration scheme to augment structural resources and generate a large biomedical NED dataset for pretraining. Our pretrained model with injected structural knowledge achieves state-of-the-art performance on two benchmark medical NED datasets: MedMentions and BC5CDR. Furthermore, we improve disambiguation of rare entities by up to 57 accuracy points.
Shared Visual Representations of Drawing for Communication: How do different biases affect human interpretability and intent?
Authors: Daniela Mihai, Jonathon Hare
Date: 2021-10-15 00:00:00
Proceeding: NeurIPS Workshop SVRHM 2021 12

We present an investigation into how representational losses can affect the drawings produced by artificial agents playing a communication game. Building upon recent advances, we show that a combination of powerful pretrained encoder networks, with appropriate inductive biases, can lead to agents that draw recognisable sketches, whilst still communicating well. Further, we start to develop an approach to help automatically analyse the semantic content being conveyed by a sketch and demonstrate that current approaches to inducing perceptual biases lead to a notion of objectness being a key feature despite the agent training being self-supervised.
Evaluation of Hyperparameter-Optimization Approaches in an Industrial Federated Learning System
Authors: Stephanie Holly, Thomas Hiessl, Safoura Rezapour Lakani, Daniel Schall, Clemens Heitzinger, Jana Kemnitz
Date: 2021-10-15 00:00:00
Tasks: Bayesian Optimization, Federated Learning, Hyperparameter Optimization

Federated Learning (FL) decouples model training from the need for direct access to the data and allows organizations to collaborate with industry partners to reach a satisfying level of performance without sharing vulnerable business information. The performance of a machine learning algorithm is highly sensitive to the choice of its hyperparameters. In an FL setting, hyperparameter optimization poses new challenges. In this work, we investigated the impact of different hyperparameter optimization approaches in an FL system. In an effort to reduce communication costs, a critical bottleneck in FL, we investigated a local hyperparameter optimization approach that -- in contrast to a global hyperparameter optimization approach -- allows every client to have its own hyperparameter configuration. We implemented these approaches based on grid search and Bayesian optimization and evaluated the algorithms on the MNIST data set using an i.i.d. partition and on an Internet of Things (IoT) sensor based industrial data set using a non-i.i.d. partition.
Crop Rotation Modeling for Deep Learning-Based Parcel Classification from Satellite Time Series
Authors: Félix Quinton, Loic Landrieu
Date: 2021-10-15 00:00:00
Tasks: Classification, Crop Classification, Crop Type Mapping, Time Series, Time Series Analysis

While annual crop rotations play a crucial role for agricultural optimization, they have been largely ignored for automated crop type mapping. In this paper, we take advantage of the increasing quantity of annotated satellite data to propose the first deep learning approach modeling simultaneously the inter- and intra-annual agricultural dynamics of parcel classification. Along with simple training adjustments, our model provides an improvement of over 6.3 mIoU points over the current state-of-the-art of crop classification. Furthermore, we release the first large-scale multi-year agricultural dataset with over 300,000 annotated parcels.
Simulation of emergence in artificial societies: a practical model-based approach with the EB-DEVS formalism
Authors: Daniel Foguelman, Esteban Lanzarotti, Emanuel Ferreyra, Rodrigo Castro
Date: 2021-10-15 00:00:00
Tasks: Cultural Vocal Bursts Intensity Prediction

Modelling and simulation of complex systems is key to exploring and understanding social processes, benefiting from formal mechanisms to derive global-level properties from local-level interactions. In this paper we extend the body of knowledge on formal methods in complex systems by applying EB-DEVS, a novel formalism tailored for the modelling, simulation and live identification of emergent properties. We guide the reader through the implementation of different classical models for varied social systems to introduce good modelling practices and showcase the advantages and limitations of modelling emergence with EB-DEVS, in particular through its live emergence detection capability. This work provides case study-driven evidence for the neatness and compactness of the approach to modelling communication structures that can be explicit or implicit, static or dynamic, with or without multilevel interactions, and with weak or strong emergent behaviour. Throughout examples we show that EB-DEVS permits conceptualising the analysed societies by incorporating emergent behaviour when required, namely by integrating as a macro-level aggregate the Gini index in the Sugarscape model, Fads and Fashion in the Dissemination of Culture model, size-biased degree distribution in a Preferential Attachment model, happiness index in the Segregation model and quarantines in the SIR epidemic model. In each example we discuss the role of communication structures in the development of multilevel simulation models, and illustrate how micro-macro feedback loops enable the modelling of macro-level properties. Our results stress the relevance of multilevel features to support a robust approach in the modelling and simulation of complex systems.
milIE: Modular & Iterative Multilingual Open Information Extraction
Authors: Bhushan Kotnis, Kiril Gashteovski, Daniel Oñoro Rubio, Vanesa Rodriguez-Tembras, Ammar Shaker, Makoto Takamoto, Mathias Niepert, Carolin Lawrence
Date: 2021-10-15 00:00:00
Proceeding: ACL 2022 5
Tasks: Open Information Extraction

Open Information Extraction (OpenIE) is the task of extracting (subject, predicate, object) triples from natural language sentences. Current OpenIE systems extract all triple slots independently. In contrast, we explore the hypothesis that it may be beneficial to extract triple slots iteratively: first extract easy slots, followed by the difficult ones by conditioning on the easy slots, and therefore achieve a better overall extraction. Based on this hypothesis, we propose a neural OpenIE system, milIE, that operates in an iterative fashion. Due to the iterative nature, the system is also modular -- it is possible to seamlessly integrate rule based extraction systems with a neural end-to-end system, thereby allowing rule based systems to supply extraction slots which milIE can leverage for extracting the remaining slots. We confirm our hypothesis empirically: milIE outperforms SOTA systems on multiple languages ranging from Chinese to Arabic. Additionally, we are the first to provide an OpenIE test dataset for Arabic and Galician.
Effects of Different Optimization Formulations in Evolutionary Reinforcement Learning on Diverse Behavior Generation
Authors: Victor Villin, Naoki Masuyama, Yusuke Nojima
Date: 2021-10-15 00:00:00
Tasks: Atari Games, Diversity, reinforcement-learning, Reinforcement Learning, Reinforcement Learning (RL)

Generating various strategies for a given task is challenging. However, it has already proven to bring many assets to the main learning process, such as improved behavior exploration. With the growth in the interest of heterogeneity in solution in evolutionary computation and reinforcement learning, many promising approaches have emerged. To better understand how one guides multiple policies toward distinct strategies and benefit from diversity, we need to analyze further the influence of the reward signal modulation and other evolutionary mechanisms on the obtained behaviors. To that effect, this paper considers an existing evolutionary reinforcement learning framework which exploits multi-objective optimization as a way to obtain policies that succeed at behavior-related tasks as well as completing the main goal. Experiments on the Atari games stress that optimization formulations which do not consider objectives equally fail at generating diversity and even output agents that are worse at solving the problem at hand, regardless of the obtained behaviors.
Using DeepProbLog to perform Complex Event Processing on an Audio Stream
Authors: Marc Roig Vilamala, Tianwei Xing, Harrison Taylor, Luis Garcia, Mani Srivastava, Lance Kaplan, Alun Preece, Angelika Kimmig, Federico Cerutti
Date: 2021-10-15 00:00:00

In this paper, we present an approach to Complex Event Processing (CEP) that is based on DeepProbLog. This approach has the following objectives: (i) allowing the use of subsymbolic data as an input, (ii) retaining the flexibility and modularity on the definitions of complex event rules, (iii) allowing the system to be trained in an end-to-end manner and (iv) being robust against noisily labelled data. Our approach makes use of DeepProbLog to create a neuro-symbolic architecture that combines a neural network to process the subsymbolic data with a probabilistic logic layer to allow the user to define the rules for the complex events. We demonstrate that our approach is capable of detecting complex events from an audio stream. We also demonstrate that our approach is capable of training even with a dataset that has a moderate proportion of noisy data.
Automated Quality Control of Vacuum Insulated Glazing by Convolutional Neural Network Image Classification
Authors: Henrik Riedel, Sleheddine Mokdad, Isabell Schulz, Cenk Kocer, Philipp Rosendahl, Jens Schneider, Michael A. Kraus, Michael Drass
Date: 2021-10-15 00:00:00
Tasks: Explainable artificial intelligence, Explainable Artificial Intelligence (XAI), image-classification, Image Classification

Vacuum Insulated Glazing (VIG) is a highly thermally insulating window technology, which boasts an extremely thin profile and lower weight as compared to gas-filled insulated glazing units of equivalent performance. The VIG is a double-pane configuration with a submillimeter vacuum gap between the panes and therefore under constant atmospheric pressure over their service life. Small pillars are positioned between the panes to maintain the gap, which can damage the glass reducing the lifetime of the VIG unit. To efficiently assess any surface damage on the glass, an automated damage detection system is highly desirable. For the purpose of classifying the damage, we have developed, trained, and tested a deep learning computer vision system using convolutional neural networks. The classification model flawlessly classified the test dataset with an area under the curve (AUC) for the receiver operating characteristic (ROC) of 100%. We have automatically cropped the images down to their relevant information by using Faster-RCNN to locate the position of the pillars. We employ the state-of-the-art methods Grad-CAM and Score-CAM of explainable Artificial Intelligence (XAI) to provide an understanding of the internal mechanisms and were able to show that our classifier outperforms ResNet50V2 for identification of crack locations and geometry. The proposed methods can therefore be used to detect systematic defects even without large amounts of training data. Further analyses of our model's predictive capabilities demonstrates its superiority over state-of-the-art models (ResNet50V2, ResNet101V2 and ResNet152V2) in terms of convergence speed, accuracy, precision at 100% recall and AUC for ROC.
SAT Encodings for Pseudo-Boolean Constraints Together With At-Most-One Constraints
Authors: Miquel Bofill, Jordi Coll, Peter Nightingale, Josep Suy, Felix Ulrich-Oltean, Mateu Villaret
Date: 2021-10-15 00:00:00
Tasks: Scheduling

When solving a combinatorial problem using propositional satisfiability (SAT), the encoding of the problem is of vital importance. We study encodings of Pseudo-Boolean (PB) constraints, a common type of arithmetic constraint that appears in a wide variety of combinatorial problems such as timetabling, scheduling, and resource allocation. In some cases PB constraints occur together with at-most-one (AMO) constraints over subsets of their variables (forming PB(AMO) constraints). Recent work has shown that taking account of AMOs when encoding PB constraints using decision diagrams can produce a dramatic improvement in solver efficiency. In this paper we extend the approach to other state-of-the-art encodings of PB constraints, developing several new encodings for PB(AMO) constraints. Also, we present a more compact and efficient version of the popular Generalized Totalizer encoding, named Reduced Generalized Totalizer. This new encoding is also adapted for PB(AMO) constraints for a further gain. Our experiments show that the encodings of PB(AMO) constraints can be substantially smaller than those of PB constraints. PB(AMO) encodings allow many more instances to be solved within a time limit, and solving time is improved by more than one order of magnitude in some cases. We also observed that there is no single overall winner among the considered encodings, but efficiency of each encoding may depend on PB(AMO) characteristics such as the magnitude of coefficient values.
Dual-Arm Adversarial Robot Learning
Authors: Elie Aljalbout
Date: 2021-10-15 00:00:00
Tasks: Safe Exploration

Robot learning is a very promising topic for the future of automation and machine intelligence. Future robots should be able to autonomously acquire skills, learn to represent their environment, and interact with it. While these topics have been explored in simulation, real-world robot learning research seems to be still limited. This is due to the additional challenges encountered in the real-world, such as noisy sensors and actuators, safe exploration, non-stationary dynamics, autonomous environment resetting as well as the cost of running experiments for long periods of time. Unless we develop scalable solutions to these problems, learning complex tasks involving hand-eye coordination and rich contacts will remain an untouched vision that is only feasible in controlled lab environments. We propose dual-arm settings as platforms for robot learning. Such settings enable safe data collection for acquiring manipulation skills as well as training perception modules in a robot-supervised manner. They also ease the processes of resetting the environment. Furthermore, adversarial learning could potentially boost the generalization capability of robot learning methods by maximizing the exploration based on game-theoretic objectives while ensuring safety based on collaborative task spaces. In this paper, we will discuss the potential benefits of this setup as well as the challenges and research directions that can be pursued.