pwc-archive/papers-with-abstracts huggingface dataset:
Music Score Expansion with Variable-Length Infilling
Authors: Chih-Pin Tan, Chin-Jui Chang, Alvin W. Y. Su, Yi-Hsuan Yang
Date: 2021-11-11 00:00:00

In this paper, we investigate using the variable-length infilling (VLI) model, which is originally proposed to infill missing segments, to "prolong" existing musical segments at musical boundaries. Specifically, as a case study, we expand 20 musical segments from 12 bars to 16 bars, and examine the degree to which the VLI model preserves musical boundaries in the expanded results using a few objective metrics, including the Register Histogram Similarity we newly propose. The results show that the VLI model has the potential to address the expansion task.
Constrained Stochastic Submodular Maximization with State-Dependent Costs
Authors: Shaojie Tang
Date: 2021-11-11 00:00:00

In this paper, we study the constrained stochastic submodular maximization problem with state-dependent costs. The input of our problem is a set of items whose states (i.e., the marginal contribution and the cost of an item) are drawn from a known probability distribution. The only way to know the realized state of an item is to select that item. We consider two constraints, i.e., \emph{inner} and \emph{outer} constraints. Recall that each item has a state-dependent cost, and the inner constraint states that the total \emph{realized} cost of all selected items must not exceed a give budget. Thus, inner constraint is state-dependent. The outer constraint, one the other hand, is state-independent. It can be represented as a downward-closed family of sets of selected items regardless of their states. Our objective is to maximize the objective function subject to both inner and outer constraints. Under the assumption that larger cost indicates larger "utility", we present a constant approximate solution to this problem.
CubeTR: Learning to Solve The Rubiks Cube Using Transformers
Authors: Mustafa Ebrahim Chasmai
Date: 2021-11-11 00:00:00
Tasks: reinforcement-learning, Reinforcement Learning, Reinforcement Learning (RL)

Since its first appearance, transformers have been successfully used in wide ranging domains from computer vision to natural language processing. Application of transformers in Reinforcement Learning by reformulating it as a sequence modelling problem was proposed only recently. Compared to other commonly explored reinforcement learning problems, the Rubiks cube poses a unique set of challenges. The Rubiks cube has a single solved state for quintillions of possible configurations which leads to extremely sparse rewards. The proposed model CubeTR attends to longer sequences of actions and addresses the problem of sparse rewards. CubeTR learns how to solve the Rubiks cube from arbitrary starting states without any human prior, and after move regularisation, the lengths of solutions generated by it are expected to be very close to those given by algorithms used by expert human solvers. CubeTR provides insights to the generalisability of learning algorithms to higher dimensional cubes and the applicability of transformers in other relevant sparse reward scenarios.
Theoretical Exploration of Flexible Transmitter Model
Authors: Jin-Hui Wu, Shao-Qun Zhang, Yuan Jiang, Zhi-Hua Zhou
Date: 2021-11-11 00:00:00
Tasks: model

Neural network models generally involve two important components, i.e., network architecture and neuron model. Although there are abundant studies about network architectures, only a few neuron models have been developed, such as the MP neuron model developed in 1943 and the spiking neuron model developed in the 1950s. Recently, a new bio-plausible neuron model, Flexible Transmitter (FT) model, has been proposed. It exhibits promising behaviors, particularly on temporal-spatial signals, even when simply embedded into the common feedforward network architecture. This paper attempts to understand the properties of the FT network (FTNet) theoretically. Under mild assumptions, we show that: i) FTNet is a universal approximator; ii) the approximation complexity of FTNet can be exponentially smaller than those of commonly-used real-valued neural networks with feedforward/recurrent architectures and is of the same order in the worst case; iii) any local minimum of FTNet is the global minimum, implying that it is possible to identify global minima by local search algorithms.
HMD-AMP: Protein Language-Powered Hierarchical Multi-label Deep Forest for Annotating Antimicrobial Peptides
Authors: Qinze Yu, Zhihang Dong, Xingyu Fan, Licheng Zong, Yu Li
Date: 2021-11-11 00:00:00
Tasks: Binary Classification, Language Modelling, Multi-Label Classification, MUlTI-LABEL-ClASSIFICATION, Protein Language Model

Identifying the targets of an antimicrobial peptide is a fundamental step in studying the innate immune response and combating antibiotic resistance, and more broadly, precision medicine and public health. There have been extensive studies on the statistical and computational approaches to identify (i) whether a peptide is an antimicrobial peptide (AMP) or a non-AMP and (ii) which targets are these sequences effective to (Gram-positive, Gram-negative, etc.). Despite the existing deep learning methods on this problem, most of them are unable to handle the small AMP classes (anti-insect, anti-parasite, etc.). And more importantly, some AMPs can have multiple targets, which the previous methods fail to consider. In this study, we build a diverse and comprehensive multi-label protein sequence database by collecting and cleaning amino acids from various AMP databases. To generate efficient representations and features for the small classes dataset, we take advantage of a protein language model trained on 250 million protein sequences. Based on that, we develop an end-to-end hierarchical multi-label deep forest framework, HMD-AMP, to annotate AMP comprehensively. After identifying an AMP, it further predicts what targets the AMP can effectively kill from eleven available classes. Extensive experiments suggest that our framework outperforms state-of-the-art models in both the binary classification task and the multi-label classification task, especially on the minor classes.The model is robust against reduced features and small perturbations and produces promising results. We believe HMD-AMP contributes to both the future wet-lab investigations of the innate structural properties of different antimicrobial peptides and build promising empirical underpinnings for precise medicine with antibiotics.
AlphaGarden: Learning to Autonomously Tend a Polyculture Garden
Authors: Mark Presten, Yahav Avigal, Mark Theis, Satvik Sharma, Rishi Parikh, Shrey Aeron, Sandeep Mukherjee, Sebastian Oehme, Simeon Adebola, Walter Teitelbaum, Varun Kamat, Ken Goldberg
Date: 2021-11-11 00:00:00
Tasks: Diversity

This paper presents AlphaGarden: an autonomous polyculture garden that prunes and irrigates living plants in a 1.5m x 3.0m physical testbed. AlphaGarden uses an overhead camera and sensors to track the plant distribution and soil moisture. We model individual plant growth and interplant dynamics to train a policy that chooses actions to maximize leaf coverage and diversity. For autonomous pruning, AlphaGarden uses two custom-designed pruning tools and a trained neural network to detect prune points. We present results for four 60-day garden cycles. Results suggest AlphaGarden can autonomously achieve 0.96 normalized diversity with pruning shears while maintaining an average canopy coverage of 0.86 during the peak of the cycle. Code, datasets, and supplemental material can be found at https://github.com/BerkeleyAutomation/AlphaGarden.
Climate Modeling with Neural Diffusion Equations
Authors: Jeehyun Hwang, Jeongwhan Choi, Hwangyong Choi, Kookjin Lee, Dongeun Lee, Noseong Park
Date: 2021-11-11 00:00:00
Tasks: Weather Forecasting

Owing to the remarkable development of deep learning technology, there have been a series of efforts to build deep learning-based climate models. Whereas most of them utilize recurrent neural networks and/or graph neural networks, we design a novel climate model based on the two concepts, the neural ordinary differential equation (NODE) and the diffusion equation. Many physical processes involving a Brownian motion of particles can be described by the diffusion equation and as a result, it is widely used for modeling climate. On the other hand, neural ordinary differential equations (NODEs) are to learn a latent governing equation of ODE from data. In our presented method, we combine them into a single framework and propose a concept, called neural diffusion equation (NDE). Our NDE, equipped with the diffusion equation and one more additional neural network to model inherent uncertainty, can learn an appropriate latent governing equation that best describes a given climate dataset. In our experiments with two real-world and one synthetic datasets and eleven baselines, our method consistently outperforms existing baselines by non-trivial margins.
Agent Spaces
Authors: John C. Raisbeck, Matthew W. Allen, Hakho Lee
Date: 2021-11-11 00:00:00
Tasks: reinforcement-learning, Reinforcement Learning, Reinforcement Learning (RL)

Exploration is one of the most important tasks in Reinforcement Learning, but it is not well-defined beyond finite problems in the Dynamic Programming paradigm (see Subsection 2.4). We provide a reinterpretation of exploration which can be applied to any online learning method. We come to this definition by approaching exploration from a new direction. After finding that concepts of exploration created to solve simple Markov decision processes with Dynamic Programming are no longer broadly applicable, we reexamine exploration. Instead of extending the ends of dynamic exploration procedures, we extend their means. That is, rather than repeatedly sampling every state-action pair possible in a process, we define the act of modifying an agent to itself be explorative. The resulting definition of exploration can be applied in infinite problems and non-dynamic learning methods, which the dynamic notion of exploration cannot tolerate. To understand the way that modifications of an agent affect learning, we describe a novel structure on the set of agents: a collection of distances (see footnote 7) $d_{a} \in A$, which represent the perspectives of each agent possible in the process. Using these distances, we define a topology and show that many important structures in Reinforcement Learning are well behaved under the topology induced by convergence in the agent space.
Detecting Fake Points of Interest from Location Data
Authors: Syed Raza Bashir, Vojislav Misic
Date: 2021-11-11 00:00:00

The pervasiveness of GPS-enabled mobile devices and the widespread use of location-based services have resulted in the generation of massive amounts of geo-tagged data. In recent times, the data analysis now has access to more sources, including reviews, news, and images, which also raises questions about the reliability of Point-of-Interest (POI) data sources. While previous research attempted to detect fake POI data through various security mechanisms, the current work attempts to capture the fake POI data in a much simpler way. The proposed work is focused on supervised learning methods and their capability to find hidden patterns in location-based data. The ground truth labels are obtained through real-world data, and the fake data is generated using an API, so we get a dataset with both the real and fake labels on the location data. The objective is to predict the truth about a POI using the Multi-Layer Perceptron (MLP) method. In the proposed work, MLP based on data classification technique is used to classify location data accurately. The proposed method is compared with traditional classification and robust and recent deep neural methods. The results show that the proposed method is better than the baseline methods.
On the Use and Misuse of Absorbing States in Multi-agent Reinforcement Learning
Authors: Andrew Cohen, Ervin Teng, Vincent-Pierre Berges, Ruo-Ping Dong, Hunter Henry, Marwan Mattar, Alexander Zook, Sujoy Ganguly
Date: 2021-11-10 00:00:00
Tasks: Multi-agent Reinforcement Learning, reinforcement-learning, Reinforcement Learning (RL)

The creation and destruction of agents in cooperative multi-agent reinforcement learning (MARL) is a critically under-explored area of research. Current MARL algorithms often assume that the number of agents within a group remains fixed throughout an experiment. However, in many practical problems, an agent may terminate before their teammates. This early termination issue presents a challenge: the terminated agent must learn from the group's success or failure which occurs beyond its own existence. We refer to propagating value from rewards earned by remaining teammates to terminated agents as the Posthumous Credit Assignment problem. Current MARL methods handle this problem by placing these agents in an absorbing state until the entire group of agents reaches a termination condition. Although absorbing states enable existing algorithms and APIs to handle terminated agents without modification, practical training efficiency and resource use problems exist. In this work, we first demonstrate that sample complexity increases with the quantity of absorbing states in a toy supervised learning task for a fully connected network, while attention is more robust to variable size input. Then, we present a novel architecture for an existing state-of-the-art MARL algorithm which uses attention instead of a fully connected layer with absorbing states. Finally, we demonstrate that this novel architecture significantly outperforms the standard architecture on tasks in which agents are created or destroyed within episodes as well as standard multi-agent coordination tasks.
Cross-language Information Retrieval
Authors: Petra Galuščáková, Douglas W. Oard, Suraj Nair
Date: 2021-11-10 00:00:00
Tasks: Information Retrieval, Retrieval

Two key assumptions shape the usual view of ranked retrieval: (1) that the searcher can choose words for their query that might appear in the documents that they wish to see, and (2) that ranking retrieved documents will suffice because the searcher will be able to recognize those which they wished to find. When the documents to be searched are in a language not known by the searcher, neither assumption is true. In such cases, Cross-Language Information Retrieval (CLIR) is needed. This chapter reviews the state of the art for CLIR and outlines some open research questions.
Classification of the Chess Endgame problem using Logistic Regression, Decision Trees, and Neural Networks
Authors: Mahmoud S. Fayed
Date: 2021-11-10 00:00:00
Tasks: regression

In this study we worked on the classification of the Chess Endgame problem using different algorithms like logistic regression, decision trees and neural networks. Our experiments indicates that the Neural Networks provides the best accuracy (85%) then the decision trees (79%). We did these experiments using Microsoft Azure Machine Learning as a case-study on using Visual Programming in classification. Our experiments demonstrates that this tool is powerful and save a lot of time, also it could be improved with more features that increase the usability and reduce the learning curve. We also developed an application for dataset visualization using a new programming language called Ring, our experiments demonstrates that this language have simple design like Python while integrates RAD tools like Visual Basic which is good for GUI development in the open-source world
Soft Sensing Transformer: Hundreds of Sensors are Worth a Single Word
Authors: Chao Zhang, Jaswanth Yella, Yu Huang, Xiaoye Qian, Sergei Petrov, Andrey Rzhetsky, Sthitie Bom
Date: 2021-11-10 00:00:00
Tasks: Sentence, Time Series, Time Series Analysis

With the rapid development of AI technology in recent years, there have been many studies with deep learning models in soft sensing area. However, the models have become more complex, yet, the data sets remain limited: researchers are fitting million-parameter models with hundreds of data samples, which is insufficient to exercise the effectiveness of their models and thus often fail to perform when implemented in industrial applications. To solve this long-lasting problem, we are providing large scale, high dimensional time series manufacturing sensor data from Seagate Technology to the public. We demonstrate the challenges and effectiveness of modeling industrial big data by a Soft Sensing Transformer model on these data sets. Transformer is used because, it has outperformed state-of-the-art techniques in Natural Language Processing, and since then has also performed well in the direct application to computer vision without introduction of image-specific inductive biases. We observe the similarity of a sentence structure to the sensor readings and process the multi-variable sensor readings in a time series in a similar manner of sentences in natural language. The high-dimensional time-series data is formatted into the same shape of embedded sentences and fed into the transformer model. The results show that transformer model outperforms the benchmark models in soft sensing field based on auto-encoder and long short-term memory (LSTM) models. To the best of our knowledge, we are the first team in academia or industry to benchmark the performance of original transformer model with large-scale numerical soft sensing data.
Amazon SageMaker Model Parallelism: A General and Flexible Framework for Large Model Training
Authors: Can Karakus, Rahul Huilgol, Fei Wu, Anirudh Subramanian, Cade Daniel, Derya Cavdar, Teng Xu, Haohan Chen, Arash Rahnama, Luis Quintela
Date: 2021-11-10 00:00:00
Tasks: Collaborative Filtering, model

With deep learning models rapidly growing in size, systems-level solutions for large-model training are required. We present Amazon SageMaker model parallelism, a software library that integrates with PyTorch, and enables easy training of large models using model parallelism and other memory-saving features. In contrast to existing solutions, the implementation of the SageMaker library is much more generic and flexible, in that it can automatically partition and run pipeline parallelism over arbitrary model architectures with minimal code change, and also offers a general and extensible framework for tensor parallelism, which supports a wider range of use cases, and is modular enough to be easily applied to new training scripts. The library also preserves the native PyTorch user experience to a much larger degree, supporting module re-use and dynamic graphs, while giving the user full control over the details of the training step. We evaluate performance over GPT-3, RoBERTa, BERT, and neural collaborative filtering, and demonstrate competitive performance over existing solutions.
PowerGridworld: A Framework for Multi-Agent Reinforcement Learning in Power Systems
Authors: David Biagioni, Xiangyu Zhang, Dylan Wald, Deepthi Vaidhynathan, Rohit Chintala, Jennifer King, Ahmed S. Zamzam
Date: 2021-11-10 00:00:00
Tasks: Multi-agent Reinforcement Learning, reinforcement-learning, Reinforcement Learning (RL)

We present the PowerGridworld software package to provide users with a lightweight, modular, and customizable framework for creating power-systems-focused, multi-agent Gym environments that readily integrate with existing training frameworks for reinforcement learning (RL). Although many frameworks exist for training multi-agent RL (MARL) policies, none can rapidly prototype and develop the environments themselves, especially in the context of heterogeneous (composite, multi-device) power systems where power flow solutions are required to define grid-level variables and costs. PowerGridworld is an open-source software package that helps to fill this gap. To highlight PowerGridworld's key features, we present two case studies and demonstrate learning MARL policies using both OpenAI's multi-agent deep deterministic policy gradient (MADDPG) and RLLib's proximal policy optimization (PPO) algorithms. In both cases, at least some subset of agents incorporates elements of the power flow solution at each time step as part of their reward (negative cost) structures.
Robust Learning via Ensemble Density Propagation in Deep Neural Networks
Authors: Giuseppina Carannante, Dimah Dera, Ghulam Rasool, Nidhal C. Bouaynaya, Lyudmila Mihaylova
Date: 2021-11-10 00:00:00
Tasks: Variational Inference

Learning in uncertain, noisy, or adversarial environments is a challenging task for deep neural networks (DNNs). We propose a new theoretically grounded and efficient approach for robust learning that builds upon Bayesian estimation and Variational Inference. We formulate the problem of density propagation through layers of a DNN and solve it using an Ensemble Density Propagation (EnDP) scheme. The EnDP approach allows us to propagate moments of the variational probability distribution across the layers of a Bayesian DNN, enabling the estimation of the mean and covariance of the predictive distribution at the output of the model. Our experiments using MNIST and CIFAR-10 datasets show a significant improvement in the robustness of the trained models to random noise and adversarial attacks.
Self-Compression in Bayesian Neural Networks
Authors: Giuseppina Carannante, Dimah Dera, Ghulam Rasool, Nidhal C. Bouaynaya
Date: 2021-11-10 00:00:00
Tasks: BIG-bench Machine Learning

Machine learning models have achieved human-level performance on various tasks. This success comes at a high cost of computation and storage overhead, which makes machine learning algorithms difficult to deploy on edge devices. Typically, one has to partially sacrifice accuracy in favor of an increased performance quantified in terms of reduced memory usage and energy consumption. Current methods compress the networks by reducing the precision of the parameters or by eliminating redundant ones. In this paper, we propose a new insight into network compression through the Bayesian framework. We show that Bayesian neural networks automatically discover redundancy in model parameters, thus enabling self-compression, which is linked to the propagation of uncertainty through the layers of the network. Our experimental results show that the network architecture can be successfully compressed by deleting parameters identified by the network itself while retaining the same level of accuracy.