pwc-archive/papers-with-abstracts huggingface dataset:
Direct Reconstruction of Linear Parametric Images from Dynamic PET Using Nonlocal Deep Image Prior
Authors: Kuang Gong, Ciprian Catana, Jinyi Qi, Quanzheng Li
Date: 2021-06-18 00:00:00
Tasks: Denoising

Direct reconstruction methods have been developed to estimate parametric images directly from the measured PET sinograms by combining the PET imaging model and tracer kinetics in an integrated framework. Due to limited counts received, signal-to-noise-ratio (SNR) and resolution of parametric images produced by direct reconstruction frameworks are still limited. Recently supervised deep learning methods have been successfully applied to medical imaging denoising/reconstruction when large number of high-quality training labels are available. For static PET imaging, high-quality training labels can be acquired by extending the scanning time. However, this is not feasible for dynamic PET imaging, where the scanning time is already long enough. In this work, we proposed an unsupervised deep learning framework for direct parametric reconstruction from dynamic PET, which was tested on the Patlak model and the relative equilibrium Logan model. The patient's anatomical prior image, which is readily available from PET/CT or PET/MR scans, was supplied as the network input to provide a manifold constraint, and also utilized to construct a kernel layer to perform non-local feature denoising. The linear kinetic model was embedded in the network structure as a 1x1 convolution layer. The training objective function was based on the PET statistical model. Evaluations based on dynamic datasets of 18F-FDG and 11C-PiB tracers show that the proposed framework can outperform the traditional and the kernel method-based direct reconstruction methods.
Single View Physical Distance Estimation using Human Pose
Authors: Xiaohan Fei, Henry Wang, Xiangyu Zeng, Lin Lee Cheong, Meng Wang, Joseph Tighe
Date: 2021-06-18 00:00:00
Proceeding: ICCV 2021 10
Tasks: Camera Calibration

We propose a fully automated system that simultaneously estimates the camera intrinsics, the ground plane, and physical distances between people from a single RGB image or video captured by a camera viewing a 3-D scene from a fixed vantage point. To automate camera calibration and distance estimation, we leverage priors about human pose and develop a novel direct formulation for pose-based auto-calibration and distance estimation, which shows state-of-the-art performance on publicly available datasets. The proposed approach enables existing camera systems to measure physical distances without needing a dedicated calibration process or range sensors, and is applicable to a broad range of use cases such as social distancing and workplace safety. Furthermore, to enable evaluation and drive research in this area, we contribute to the publicly available MEVA dataset with additional distance annotations, resulting in MEVADA -- the first evaluation benchmark in the world for the pose-based auto-calibration and distance estimation problem.
Reliability and Validity of Image-Based and Self-Reported Skin Phenotype Metrics
Authors: John J. Howard, Yevgeniy B. Sirotin, Jerry L. Tipton, Arun R. Vemury
Date: 2021-06-18 00:00:00
Tasks: Face Recognition

With increasing adoption of face recognition systems, it is important to ensure adequate performance of these technologies across demographic groups. Recently, phenotypes such as skin-tone, have been proposed as superior alternatives to traditional race categories when exploring performance differentials. However, there is little consensus regarding how to appropriately measure skin-tone in evaluations of biometric performance or in AI more broadly. In this study, we explore the relationship between face-area-lightness-measures (FALMs) estimated from images and ground-truth skin readings collected using a device designed to measure human skin. FALMs estimated from different images of the same individual varied significantly relative to ground-truth FALM. This variation was only reduced by greater control of acquisition (camera, background, and environment). Next, we compare ground-truth FALM to Fitzpatrick Skin Types (FST) categories obtained using the standard, in-person, medical survey and show FST is poorly predictive of skin-tone. Finally, we show how noisy estimation of FALM leads to errors selecting explanatory factors for demographic differentials. These results demonstrate that measures of skin-tone for biometric performance evaluations must come from objective, characterized, and controlled sources. Further, despite this being a currently practiced approach, estimating FST categories and FALMs from uncontrolled imagery does not provide an appropriate measure of skin-tone.
Nested Variational Inference
Authors: Heiko Zimmermann, Hao Wu, Babak Esmaeili, Jan-Willem van de Meent
Date: 2021-06-21 00:00:00
Proceeding: NeurIPS 2021 12
Tasks: Variational Inference

We develop nested variational inference (NVI), a family of methods that learn proposals for nested importance samplers by minimizing an forward or reverse KL divergence at each level of nesting. NVI is applicable to many commonly-used importance sampling strategies and provides a mechanism for learning intermediate densities, which can serve as heuristics to guide the sampler. Our experiments apply NVI to (a) sample from a multimodal distribution using a learned annealing path (b) learn heuristics that approximate the likelihood of future observations in a hidden Markov model and (c) to perform amortized inference in hierarchical deep generative models. We observe that optimizing nested objectives leads to improved sample quality in terms of log average weight and effective sample size.
Smooth Sequential Optimisation with Delayed Feedback
Authors: Srivas Chennu, Jamie Martin, Puli Liyanagama, Phil Mohr
Date: 2021-06-21 00:00:00
Tasks: Multi-Armed Bandits

Stochastic delays in feedback lead to unstable sequential learning using multi-armed bandits. Recently, empirical Bayesian shrinkage has been shown to improve reward estimation in bandit learning. Here, we propose a novel adaptation to shrinkage that estimates smoothed reward estimates from windowed cumulative inputs, to deal with incomplete knowledge from delayed feedback and non-stationary rewards. Using numerical simulations, we show that this adaptation retains the benefits of shrinkage, and improves the stability of reward estimation by more than 50%. Our proposal reduces variability in treatment allocations to the best arm by up to 3.8x, and improves statistical accuracy - with up to 8% improvement in true positive rates and 37% reduction in false positive rates. Together, these advantages enable control of the trade-off between speed and stability of adaptation, and facilitate human-in-the-loop sequential optimisation.
A Discriminative Entity-Aware Language Model for Virtual Assistants
Authors: Mandana Saebi, Ernest Pusateri, Aaksha Meghawat, Christophe Van Gysel
Date: 2021-06-21 00:00:00
Tasks: Automatic Speech Recognition, Automatic Speech Recognition (ASR), Language Modeling, Language Modelling, Sentence, speech-recognition, Speech Recognition, World Knowledge

High-quality automatic speech recognition (ASR) is essential for virtual assistants (VAs) to work well. However, ASR often performs poorly on VA requests containing named entities. In this work, we start from the observation that many ASR errors on named entities are inconsistent with real-world knowledge. We extend previous discriminative n-gram language modeling approaches to incorporate real-world knowledge from a Knowledge Graph (KG), using features that capture entity type-entity and entity-entity relationships. We apply our model through an efficient lattice rescoring process, achieving relative sentence error rate reductions of more than 25% on some synthesized test sets covering less popular entities, with minimal degradation on a uniformly sampled VA test set.
Fully automated quantification of in vivo viscoelasticity of prostate zones using magnetic resonance elastography with Dense U-net segmentation
Authors: Nader Aldoj, Federico Biavati, Marc Dewey, Anja Hennemuth, Patrick Asbach, Ingolf Sack
Date: 2021-06-21 00:00:00
Tasks: Image Segmentation, Segmentation, Semantic Segmentation, Specificity

Magnetic resonance elastography (MRE) for measuring viscoelasticity heavily depends on proper tissue segmentation, especially in heterogeneous organs such as the prostate. Using trained network-based image segmentation, we investigated if MRE data suffice to extract anatomical and viscoelastic information for automatic tabulation of zonal mechanical properties of the prostate. Overall, 40 patients with benign prostatic hyperplasia (BPH) or prostate cancer (PCa) were examined with three magnetic resonance imaging (MRI) sequences: T2-weighted MRI (T2w), diffusion-weighted imaging (DWI), and MRE-based tomoelastography yielding six independent sets of imaging data per patient (T2w, DWI, apparent diffusion coefficient (ADC), MRE magnitude, shear wave speed, and loss angle maps). Combinations of these data were used to train Dense U-nets with manually segmented masks of the entire prostate gland (PG), central zone (CZ), and peripheral zone (PZ) in 30 patients and to validate them in 10 patients. Dice score (DS), sensitivity, specificity, and Hausdorff distance were determined. We found that segmentation based on MRE magnitude maps alone (DS, PG: 0.93$\pm$0.04, CZ: 0.95$\pm$0.03, PZ: 0.77$\pm$0.05) was more accurate than magnitude maps combined with T2w and DWI_b (DS, PG: 0.91$\pm$0.04, CZ: 0.91$\pm$0.06, PZ: 0.63$\pm$0.16) or T2w alone (DS, PG: 0.92$\pm$0.03, CZ: 0.91$\pm$0.04, PZ: 0.65$\pm$0.08). Automatically tabulated MRE values were not different from ground-truth values (P>0.05). In conclusion: MRE combined with Dense U-net segmentation allows tabulation of quantitative imaging markers without manual analysis and independent of other MRI sequences and can thus contribute to PCa detection and classification.
Compositional federated learning: Applications in distributionally robust averaging and meta learning
Authors: Feihu Huang, Junyi Li
Date: 2021-06-21 00:00:00
Tasks: BIG-bench Machine Learning, Federated Learning, Meta-Learning, Stochastic Optimization

In the paper, we propose an effective and efficient Compositional Federated Learning (ComFedL) algorithm for solving a new compositional Federated Learning (FL) framework, which frequently appears in many data mining and machine learning problems with a hierarchical structure such as distributionally robust FL and model-agnostic meta learning (MAML). Moreover, we study the convergence analysis of our ComFedL algorithm under some mild conditions, and prove that it achieves a convergence rate of $O(\frac{1}{\sqrt{T}})$, where $T$ denotes the number of iteration. To the best of our knowledge, our new Compositional FL framework is the first work to bridge federated learning with composition stochastic optimization. In particular, we first transform the distributionally robust FL (i.e., a minimax optimization problem) into a simple composition optimization problem by using KL divergence regularization. At the same time, we also first transform the distribution-agnostic MAML problem (i.e., a minimax optimization problem) into a simple yet effective composition optimization problem. Finally, we apply two popular machine learning tasks, i.e., distributionally robust FL and MAML to demonstrate the effectiveness of our algorithm.
Secure Distributed Training at Scale
Authors: Eduard Gorbunov, Alexander Borzunov, Michael Diskin, Max Ryabinin
Date: 2021-06-21 00:00:00
Tasks: Distributed Optimization, Image Classification, Language Modelling

Many areas of deep learning benefit from using increasingly larger neural networks trained on public data, as is the case for pre-trained models for NLP and computer vision. Training such models requires a lot of computational resources (e.g., HPC clusters) that are not available to small research groups and independent researchers. One way to address it is for several smaller groups to pool their computational resources together and train a model that benefits all participants. Unfortunately, in this case, any participant can jeopardize the entire training run by sending incorrect updates, deliberately or by mistake. Training in presence of such peers requires specialized distributed training algorithms with Byzantine tolerance. These algorithms often sacrifice efficiency by introducing redundant communication or passing all updates through a trusted server, making it infeasible to apply them to large-scale deep learning, where models can have billions of parameters. In this work, we propose a novel protocol for secure (Byzantine-tolerant) decentralized training that emphasizes communication efficiency.
Instrumental Variable Estimation for Compositional Treatments
Authors: Elisabeth Ailer, Christian L. Müller, Niki Kilbertus
Date: 2021-06-21 00:00:00
Tasks: Diversity, valid

Many scientific datasets are compositional in nature. Important biological examples include species abundances in ecology, cell-type compositions derived from single-cell sequencing data, and amplicon abundance data in microbiome research. Here, we provide a causal view on compositional data in an instrumental variable setting where the composition acts as the cause. First, we crisply articulate potential pitfalls for practitioners regarding the interpretation of compositional causes from the viewpoint of interventions and warn against attributing causal meaning to common summary statistics such as diversity indices in microbiome data analysis. We then advocate for and develop multivariate methods using statistical data transformations and regression techniques that take the special structure of the compositional sample space into account while still yielding scientifically interpretable results. In a comparative analysis on synthetic and real microbiome data we show the advantages and limitations of our proposal. We posit that our analysis provides a useful framework and guidance for valid and informative cause-effect estimation in the context of compositional data.
Affinity Mixup for Weakly Supervised Sound Event Detection
Authors: Mohammad Rasool Izadi, Robert Stevenson, Laura N. Kloepper
Date: 2021-06-21 00:00:00
Tasks: Event Detection, Sound Event Detection

The weakly supervised sound event detection problem is the task of predicting the presence of sound events and their corresponding starting and ending points in a weakly labeled dataset. A weak dataset associates each training sample (a short recording) to one or more present sources. Networks that solely rely on convolutional and recurrent layers cannot directly relate multiple frames in a recording. Motivated by attention and graph neural networks, we introduce the concept of an affinity mixup to incorporate time-level similarities and make a connection between frames. This regularization technique mixes up features in different layers using an adaptive affinity matrix. Our proposed affinity mixup network improves over state-of-the-art techniques event-F1 scores by $8.2\%$.
Can contrastive learning avoid shortcut solutions?
Authors: Joshua Robinson, Li Sun, Ke Yu, Kayhan Batmanghelich, Stefanie Jegelka, Suvrit Sra
Date: 2021-06-21 00:00:00
Proceeding: NeurIPS 2021 12
Tasks: Contrastive Learning

The generalization of representations learned via contrastive learning depends crucially on what features of the data are extracted. However, we observe that the contrastive loss does not always sufficiently guide which features are extracted, a behavior that can negatively impact the performance on downstream tasks via "shortcuts", i.e., by inadvertently suppressing important predictive features. We find that feature extraction is influenced by the difficulty of the so-called instance discrimination task (i.e., the task of discriminating pairs of similar points from pairs of dissimilar ones). Although harder pairs improve the representation of some features, the improvement comes at the cost of suppressing previously well represented features. In response, we propose implicit feature modification (IFM), a method for altering positive and negative samples in order to guide contrastive models towards capturing a wider variety of predictive features. Empirically, we observe that IFM reduces feature suppression, and as a result improves performance on vision and medical imaging tasks. The code is available at: \url{https://github.com/joshr17/IFM}.
AOMD: An Analogy-aware Approach to Offensive Meme Detection on Social Media
Authors: Lanyu Shang, Yang Zhang, Yuheng Zha, Yingxi Chen, Christina Youn, Dong Wang
Date: 2021-06-21 00:00:00

This paper focuses on an important problem of detecting offensive analogy meme on online social media where the visual content and the texts/captions of the meme together make an analogy to convey the offensive information. Existing offensive meme detection solutions often ignore the implicit relation between the visual and textual contents of the meme and are insufficient to identify the offensive analogy memes. Two important challenges exist in accurately detecting the offensive analogy memes: i) it is not trivial to capture the analogy that is often implicitly conveyed by a meme; ii) it is also challenging to effectively align the complex analogy across different data modalities in a meme. To address the above challenges, we develop a deep learning based Analogy-aware Offensive Meme Detection (AOMD) framework to learn the implicit analogy from the multi-modal contents of the meme and effectively detect offensive analogy memes. We evaluate AOMD on two real-world datasets from online social media. Evaluation results show that AOMD achieves significant performance gains compared to state-of-the-art baselines by detecting offensive analogy memes more accurately.
Data Optimisation for a Deep Learning Recommender System
Authors: Gustav Hertz, Sandhya Sachidanandan, Balázs Tóth, Emil S. Jørgensen, Martin Tegnér
Date: 2021-06-21 00:00:00
Tasks: Deep Learning, Privacy Preserving, Recommendation Systems, Transfer Learning

This paper advocates privacy preserving requirements on collection of user data for recommender systems. The purpose of our study is twofold. First, we ask if restrictions on data collection will hurt test quality of RNN-based recommendations. We study how validation performance depends on the available amount of training data. We use a combination of top-K accuracy, catalog coverage and novelty for this purpose, since good recommendations for the user is not necessarily captured by a traditional accuracy metric. Second, we ask if we can improve the quality under minimal data by using secondary data sources. We propose knowledge transfer for this purpose and construct a representation to measure similarities between purchase behaviour in data. This to make qualified judgements of which source domain will contribute the most. Our results show that (i) there is a saturation in test performance when training size is increased above a critical point. We also discuss the interplay between different performance metrics, and properties of data. Moreover, we demonstrate that (ii) our representation is meaningful for measuring purchase behaviour. In particular, results show that we can leverage secondary data to improve validation performance if we select a relevant source domain according to our similarly measure.
Machine Learning based optimization for interval uncertainty propagation
Authors: Alice Cicirello, Filippo Giunta
Date: 2021-06-21 00:00:00
Tasks: Bayesian Optimization, BIG-bench Machine Learning

Two non-intrusive uncertainty propagation approaches are proposed for the performance analysis of engineering systems described by expensive-to-evaluate deterministic computer models with parameters defined as interval variables. These approaches employ a machine learning based optimization strategy, the so-called Bayesian optimization, for evaluating the upper and lower bounds of a generic response variable over the set of possible responses obtained when each interval variable varies independently over its range. The lack of knowledge caused by not evaluating the response function for all the possible combinations of the interval variables is accounted for by developing a probabilistic description of the response variable itself by using a Gaussian Process regression model. An iterative procedure is developed for selecting a small number of simulations to be evaluated for updating this statistical model by using well-established acquisition functions and to assess the response bounds. In both approaches, an initial training dataset is defined. While one approach builds iteratively two distinct training datasets for evaluating separately the upper and lower bounds of the response variable, the other builds iteratively a single training dataset. Consequently, the two approaches will produce different bound estimates at each iteration. The upper and lower bound responses are expressed as point estimates obtained from the mean function of the posterior distribution. Moreover, a confidence interval on each estimate is provided for effectively communicating to engineers when these estimates are obtained for a combination of the interval variables for which no deterministic simulation has been run. Finally, two metrics are proposed to define conditions for assessing if the predicted bound estimates can be considered satisfactory.
Stratified Learning: A General-Purpose Statistical Method for Improved Learning under Covariate Shift
Authors: Maximilian Autenrieth, David A. van Dyk, Roberto Trotta, David C. Stenning
Date: 2021-06-21 00:00:00
Tasks: Causal Inference, Density Estimation

We propose a simple, statistically principled, and theoretically justified method to improve supervised learning when the training set is not representative, a situation known as covariate shift. We build upon a well-established methodology in causal inference, and show that the effects of covariate shift can be reduced or eliminated by conditioning on propensity scores. In practice, this is achieved by fitting learners within strata constructed by partitioning the data based on the estimated propensity scores, leading to approximately balanced covariates and much-improved target prediction. We demonstrate the effectiveness of our general-purpose method on two contemporary research questions in cosmology, outperforming state-of-the-art importance weighting methods. We obtain the best reported AUC (0.958) on the updated "Supernovae photometric classification challenge", and we improve upon existing conditional density estimation of galaxy redshift from Sloan Data Sky Survey (SDSS) data.
Deep Learning-Based Active User Detection for Grant-free SCMA Systems
Authors: Thushan Sivalingam, Samad Ali, Nurul Huda Mahmood, Nandana Rajatheva, Matti Latva-aho
Date: 2021-06-21 00:00:00

Grant-free random access and uplink non-orthogonal multiple access (NOMA) have been introduced to reduce transmission latency and signaling overhead in massive machine-type communication (mMTC). In this paper, we propose two novel group-based deep neural network active user detection (AUD) schemes for the grant-free sparse code multiple access (SCMA) system in mMTC uplink framework. The proposed AUD schemes learn the nonlinear mapping, i.e., multi-dimensional codebook structure and the channel characteristic. This is accomplished through the received signal which incorporates the sparse structure of device activity with the training dataset. Moreover, the offline pre-trained model is able to detect the active devices without any channel state information and prior knowledge of the device sparsity level. Simulation results show that with several active devices, the proposed schemes obtain more than twice the probability of detection compared to the conventional AUD schemes over the signal to noise ratio range of interest.