pwc-archive/papers-with-abstracts huggingface dataset:
A Deep Convolutional Neural Network for COVID-19 Detection Using Chest X-Rays
Authors: Pedro R. A. S. Bassi, Romis Attux
Date: 2020-04-30 00:00:00
Tasks: COVID-19 Diagnosis, Transfer Learning

Purpose: We present image classifiers based on Dense Convolutional Networks and transfer learning to classify chest X-ray images according to three labels: COVID-19, pneumonia and normal. Methods: We fine-tuned neural networks pretrained on ImageNet and applied a twice transfer learning approach, using NIH ChestX-ray14 dataset as an intermediate step. We also suggested a novelty called output neuron keeping, which changes the twice transfer learning technique. In order to clarify the modus operandi of the models, we used Layer-wise Relevance Propagation (LRP) to generate heatmaps. Results: We were able to reach test accuracy of 100% on our test dataset. Twice transfer learning and output neuron keeping showed promising results improving performances, mainly in the beginning of the training process. Although LRP revealed that words on the X-rays can influence the networks' predictions, we discovered this had only a very small effect on accuracy. Conclusion: Although clinical studies and larger datasets are still needed to further ensure good generalization, the state-of-the-art performances we achieved show that, with the help of artificial intelligence, chest X-rays can become a cheap and accurate auxiliary method for COVID-19 diagnosis. Heatmaps generated by LRP improve the interpretability of the deep neural networks and indicate an analytical path for future research on diagnosis. Twice transfer learning with output neuron keeping improved performances.
COVID-DA: Deep Domain Adaptation from Typical Pneumonia to COVID-19
Authors: Yifan Zhang, Shuaicheng Niu, Zhen Qiu, Ying WEI, Peilin Zhao, Jianhua Yao, Junzhou Huang, Qingyao Wu, Mingkui Tan
Date: 2020-04-30 00:00:00
Tasks: COVID-19 Diagnosis, Diagnostic, Domain Adaptation

The outbreak of novel coronavirus disease 2019 (COVID-19) has already infected millions of people and is still rapidly spreading all over the globe. Most COVID-19 patients suffer from lung infection, so one important diagnostic method is to screen chest radiography images, e.g., X-Ray or CT images. However, such examinations are time-consuming and labor-intensive, leading to limited diagnostic efficiency. To solve this issue, AI-based technologies, such as deep learning, have been used recently as effective computer-aided means to improve diagnostic efficiency. However, one practical and critical difficulty is the limited availability of annotated COVID-19 data, due to the prohibitive annotation costs and urgent work of doctors to fight against the pandemic. This makes the learning of deep diagnosis models very challenging. To address this, motivated by that typical pneumonia has similar characteristics with COVID-19 and many pneumonia datasets are publicly available, we propose to conduct domain knowledge adaptation from typical pneumonia to COVID-19. There are two main challenges: 1) the discrepancy of data distributions between domains; 2) the task difference between the diagnosis of typical pneumonia and COVID-19. To address them, we propose a new deep domain adaptation method for COVID-19 diagnosis, namely COVID-DA. Specifically, we alleviate the domain discrepancy via feature adversarial adaptation and handle the task difference issue via a novel classifier separation scheme. In this way, COVID-DA is able to diagnose COVID-19 effectively with only a small number of COVID-19 annotations. Extensive experiments verify the effectiveness of COVID-DA and its great potential for real-world applications.
Mining Message Flows using Recurrent Neural Networks for System-on-Chip Designs
Authors: Yuting Cao, Parijat Mukherjee, Mahesh Ketkar, Jin Yang, Hao Zheng
Date: 2020-04-29 00:00:00

Comprehensive specifications are essential for various activities across the entire validation continuum for system-on-chip (SoC) designs. However, specifications are often ambiguous, incomplete, or even contain inconsistencies or errors. This paper addresses this problem by developing a specification mining approach that automatically extracts sequential patterns from SoC transaction-level traces such that the mined patterns collectively characterize system-level specifications for SoC designs. This approach exploits long short-term memory (LSTM) networks trained with the collected SoC execution traces to capture sequential dependencies among various communication events. Then, a novel algorithm is developed to efficiently extract sequential patterns on system-level communications from the trained LSTM models. Several trace processing techniques are also proposed to enhance the mining performance. We evaluate the proposed approach on simulation traces of a non-trivial multi-core SoC prototype. Initial results show that the proposed approach is capable of extracting various patterns on system-level specifications from the highly concurrent SoC execution traces.
Memory Augmented Neural Model for Incremental Session-based Recommendation
Authors: Fei Mi, Boi Faltings
Date: 2020-04-28 00:00:00
Tasks: Session-Based Recommendations

Increasing concerns with privacy have stimulated interests in Session-based Recommendation (SR) using no personal data other than what is observed in the current browser session. Existing methods are evaluated in static settings which rarely occur in real-world applications. To better address the dynamic nature of SR tasks, we study an incremental SR scenario, where new items and preferences appear continuously. We show that existing neural recommenders can be used in incremental SR scenarios with small incremental updates to alleviate computation overhead and catastrophic forgetting. More importantly, we propose a general framework called Memory Augmented Neural model (MAN). MAN augments a base neural recommender with a continuously queried and updated nonparametric memory, and the predictions from the neural and the memory components are combined through another lightweight gating network. We empirically show that MAN is well-suited for the incremental SR task, and it consistently outperforms state-of-the-art neural and nonparametric methods. We analyze the results and demonstrate that it is particularly good at incrementally learning preferences on new and infrequent items.
Can We Learn Heuristics For Graphical Model Inference Using Reinforcement Learning?
Authors: Safa Messaoud, Maghav Kumar, Alexander G. Schwing
Date: 2020-04-27 00:00:00
Proceeding: CVPR 2020 6
Tasks: Action Recognition, Combinatorial Optimization, Pose Estimation, reinforcement-learning, Reinforcement Learning (RL), Segmentation, Semantic Segmentation

Combinatorial optimization is frequently used in computer vision. For instance, in applications like semantic segmentation, human pose estimation and action recognition, programs are formulated for solving inference in Conditional Random Fields (CRFs) to produce a structured output that is consistent with visual features of the image. However, solving inference in CRFs is in general intractable, and approximation methods are computationally demanding and limited to unary, pairwise and hand-crafted forms of higher order potentials. In this paper, we show that we can learn program heuristics, i.e., policies, for solving inference in higher order CRFs for the task of semantic segmentation, using reinforcement learning. Our method solves inference tasks efficiently without imposing any constraints on the form of the potentials. We show compelling results on the Pascal VOC and MOTS datasets.
Dual Stage Classification of Hand Gestures using Surface Electromyogram
Authors: Karush Suri, Rinki Gupta
Date: 2020-04-27 00:00:00
Tasks: Classification, General Classification

Surface electromyography (sEMG) is becoming exceeding useful in applications involving analysis of human motion such as in human-machine interface, assistive technology, healthcare and prosthetic development. The proposed work presents a novel dual stage classification approach for classification of grasping gestures from sEMG signals. A statistical assessment of these activities is presented to determine the similar characteristics between the considered activities. Similar activities are grouped together. In the first stage of classification, an activity is identified as belonging to a group, which is then further classified as one of the activities within the group in the second stage of classification. The performance of the proposed approach is compared to the conventional single stage classification approach in terms of classification accuracies. The classification accuracies obtained using the proposed dual stage classification are significantly higher as compared to that for single stage classification.
How Much Off-The-Shelf Knowledge Is Transferable From Natural Images To Pathology Images?
Authors: Xingyu Li, Konstantinos N. Plataniotis
Date: 2020-04-24 00:00:00
Tasks: General Classification, image-classification, Image Classification, Transfer Learning

Deep learning has achieved a great success in natural image classification. To overcome data-scarcity in computational pathology, recent studies exploit transfer learning to reuse knowledge gained from natural images in pathology image analysis, aiming to build effective pathology image diagnosis models. Since transferability of knowledge heavily depends on the similarity of the original and target tasks, significant differences in image content and statistics between pathology images and natural images raise the questions: how much knowledge is transferable? Is the transferred information equally contributed by pre-trained layers? To answer these questions, this paper proposes a framework to quantify knowledge gain by a particular layer, conducts an empirical investigation in pathology image centered transfer learning, and reports some interesting observations. Particularly, compared to the performance baseline obtained by random-weight model, though transferability of off-the-shelf representations from deep layers heavily depend on specific pathology image sets, the general representation generated by early layers does convey transferred knowledge in various image classification applications. The observation in this study encourages further investigation of specific metric and tools to quantify effectiveness and feasibility of transfer learning in future.
Quantification of MagLIF morphology using the Mallat Scattering Transformation
Authors: Michael E. Glinsky, Thomas W. Moore, William E. Lewis, Matthew R. Weis, Christopher A. Jennings, David J. Ampleford, Patrick F. Knapp, Eric C. Harding, Matthew. R. Gomez, Adam J. Harvey-Thompson
Date: 2020-04-13 00:00:00
Tasks: Diagnostic

The morphology of the stagnated plasma resulting from Magnetized Liner Inertial Fusion (MagLIF) is measured by imaging the self-emission x-rays coming from the multi-keV plasma. Equivalent diagnostic response can be generated by integrated radiation-magnetohydrodynamic (rad-MHD) simulations from programs such as HYDRA and GORGON. There have been only limited quantitative ways to compare the image morphology, that is the texture, of simulations and experiments. We have developed a metric of image morphology based on the Mallat Scattering Transformation (MST), a transformation that has proved to be effective at distinguishing textures, sounds, and written characters. This metric is designed, demonstrated, and refined by classifying ensembles (i.e., classes) of synthetic stagnation images, and by regressing an ensemble of synthetic stagnation images to the morphology (i.e., model) parameters used to generate the synthetic images. We use this metric to quantitatively compare simulations to experimental images, experimental images to each other, and to estimate the morphological parameters of the experimental images with uncertainty. This coordinate space has proved very adept at doing a sophisticated relative background subtraction in the MST space. This was needed to compare the experimental self emission images to the rad-MHD simulation images.
Pseudo-healthy synthesis with pathology disentanglement and adversarial learning
Authors: Tian Xia, Agisilaos Chartsias, Sotirios A. Tsaftaris
Date: 2020-04-20 00:00:00
Tasks: Anomaly Detection, Disentanglement, Medical Image Analysis

Pseudo-healthy synthesis is the task of creating a subject-specific `healthy' image from a pathological one. Such images can be helpful in tasks such as anomaly detection and understanding changes induced by pathology and disease. In this paper, we present a model that is encouraged to disentangle the information of pathology from what seems to be healthy. We disentangle what appears to be healthy and where disease is as a segmentation map, which are then recombined by a network to reconstruct the input disease image. We train our models adversarially using either paired or unpaired settings, where we pair disease images and maps when available. We quantitatively and subjectively, with a human study, evaluate the quality of pseudo-healthy images using several criteria. We show in a series of experiments, performed on ISLES, BraTS and Cam-CAN datasets, that our method is better than several baselines and methods from the literature. We also show that due to better training processes we could recover deformations, on surrounding tissue, caused by disease. Our implementation is publicly available at https://github.com/xiat0616/pseudo-healthy-synthesis. This paper has been accepted by Medical Image Analysis: https://doi.org/10.1016/j.media.2020.101719.
What is the people posting about symptoms related to Coronavirus in Bogota, Colombia?
Authors: Josimar E. Chire Saire, Roberto C. Navarro
Date: 2020-03-25 00:00:00

During the last months, there is an increasing alarm about a new mutation of coronavirus, covid-19 coined by World Health Organization(WHO) with an impact in many areas: economy, health, politics and others. This situation was declared a pandemic by WHO, because of the fast expansion over many countries. At the same time, people is using Social Networks to express what they think, feel or experiment, so this people are Social Sensors and helps to analyze what is happening in their city. The objective of this paper is analyze the publications of Colombian people living in Bogota with a radius of 50 km using Text Mining techniques from symptomatology approach. The results support the understanding of the spread in Colombia related to symptoms of covid19.
Deep Learning for Frame Error Prediction using a DARPA Spectrum Collaboration Challenge (SC2) Dataset
Authors: Abu Shafin Mohammad Mahdee Jameel, Ahmed P. Mohamed, Xiwen Zhang, Aly El Gamal
Date: 2020-03-22 00:00:00
Tasks: Deep Learning

We demonstrate a first example for employing deep learning in predicting frame errors for a Collaborative Intelligent Radio Network (CIRN) using a dataset collected during participation in the final scrimmages of the DARPA SC2 challenge. Four scenarios are considered based on randomizing or fixing the strategy for bandwidth and channel allocation, and either training and testing with different links or using a pilot phase for each link to train the deep neural network. We also investigate the effect of latency constraints, and uncover interesting characteristics of the predictor over different Signal to Noise Ratio (SNR) ranges. The obtained insights open the door for implementing a deep-learning-based strategy that is scalable to large heterogeneous networks, generalizable to diverse wireless environments, and suitable for predicting frame error instances and rates within a congested shared spectrum.
Learning the Associations of MITRE ATT&CK Adversarial Techniques
Authors: Rawan Al-Shaer, Jonathan M. Spring, Eliana Christou
Date: 2020-04-16 00:00:00
Tasks: Clustering

The MITRE ATT&CK Framework provides a rich and actionable repository of adversarial tactics, techniques, and procedures (TTP). However, this information would be highly useful for attack diagnosis (i.e., forensics) and mitigation (i.e., intrusion response) if we can reliably construct technique associations that will enable predicting unobserved attack techniques based on observed ones. In this paper, we present our statistical machine learning analysis on APT and Software attack data reported by MITRE ATT&CK to infer the technique clustering that represents the significant correlation that can be used for technique prediction. Due to the complex multidimensional relationships between techniques, many of the traditional clustering methods could not obtain usable associations. Our approach, using hierarchical clustering for inferring attack technique associations with 95% confidence, provides statistically significant and explainable technique correlations. Our analysis discovers 98 different technique associations (i.e., clusters) for both APT and Software attacks. Our evaluation results show that 78% of the techniques associated by our algorithm exhibit significant mutual information that indicates reasonably high predictability.
Autoencoding Pixies: Amortised Variational Inference with Graph Convolutions for Functional Distributional Semantics
Authors: Guy Emerson
Date: 2020-05-06 00:00:00
Proceeding: ACL 2020 6
Tasks: Language Modeling, Language Modelling, Semantic Composition, Semantic Similarity, Semantic Textual Similarity, Variational Inference

Functional Distributional Semantics provides a linguistically interpretable framework for distributional semantics, by representing the meaning of a word as a function (a binary classifier), instead of a vector. However, the large number of latent variables means that inference is computationally expensive, and training a model is therefore slow to converge. In this paper, I introduce the Pixie Autoencoder, which augments the generative model of Functional Distributional Semantics with a graph-convolutional neural network to perform amortised variational inference. This allows the model to be trained more effectively, achieving better results on two tasks (semantic similarity in context and semantic composition), and outperforming BERT, a large pre-trained language model.
PeTra: A Sparsely Supervised Memory Model for People Tracking
Authors: Shubham Toshniwal, Allyson Ettinger, Kevin Gimpel, Karen Livescu
Date: 2020-05-06 00:00:00
Proceeding: ACL 2020 6
Tasks: Coreference Resolution, Diagnostic

We propose PeTra, a memory-augmented neural network designed to track entities in its memory slots. PeTra is trained using sparse annotation from the GAP pronoun resolution dataset and outperforms a prior memory model on the task while using a simpler architecture. We empirically compare key modeling choices, finding that we can simplify several aspects of the design of the memory module while retaining strong performance. To measure the people tracking capability of memory models, we (a) propose a new diagnostic evaluation based on counting the number of unique entities in text, and (b) conduct a small scale human evaluation to compare evidence of people tracking in the memory logs of PeTra relative to a previous approach. PeTra is highly effective in both evaluations, demonstrating its ability to track people in its memory despite being trained with limited annotation.
DenoiSeg: Joint Denoising and Segmentation
Authors: Tim-Oliver Buchholz, Mangal Prakash, Alexander Krull, Florian Jug
Date: 2020-05-06 00:00:00
Tasks: Denoising, Few-Shot Learning, Segmentation

Microscopy image analysis often requires the segmentation of objects, but training data for this task is typically scarce and hard to obtain. Here we propose DenoiSeg, a new method that can be trained end-to-end on only a few annotated ground truth segmentations. We achieve this by extending Noise2Void, a self-supervised denoising scheme that can be trained on noisy images alone, to also predict dense 3-class segmentations. The reason for the success of our method is that segmentation can profit from denoising, especially when performed jointly within the same network. The network becomes a denoising expert by seeing all available raw data, while co-learning to segment, even if only a few segmentation labels are available. This hypothesis is additionally fueled by our observation that the best segmentation results on high quality (very low noise) raw data are obtained when moderate amounts of synthetic noise are added. This renders the denoising-task non-trivial and unleashes the desired co-learning effect. We believe that DenoiSeg offers a viable way to circumvent the tremendous hunger for high quality training data and effectively enables few-shot learning of dense segmentations.
The More the Merrier?! Evaluating the Effect of Landmark Extraction Algorithms on Landmark-Based Goal Recognition
Authors: Kin Max Piamolini Gusmão, Ramon Fraga Pereira, Felipe Meneguzzi
Date: 2020-05-06 00:00:00

Recent approaches to goal and plan recognition using classical planning domains have achieved state of the art results in terms of both recognition time and accuracy by using heuristics based on planning landmarks. To achieve such fast recognition time these approaches use efficient, but incomplete, algorithms to extract only a subset of landmarks for planning domains and problems, at the cost of some accuracy. In this paper, we investigate the impact and effect of using various landmark extraction algorithms capable of extracting a larger proportion of the landmarks for each given planning problem, up to exhaustive landmark extraction. We perform an extensive empirical evaluation of various landmark-based heuristics when using different percentages of the full set of landmarks. Results show that having more landmarks does not necessarily mean achieving higher accuracy and lower spread, as the additional extracted landmarks may not necessarily increase be helpful towards the goal recognition task.
What are the Goals of Distributional Semantics?
Authors: Guy Emerson
Date: 2020-05-06 00:00:00
Proceeding: ACL 2020 6

Distributional semantic models have become a mainstay in NLP, providing useful features for downstream tasks. However, assessing long-term progress requires explicit long-term goals. In this paper, I take a broad linguistic perspective, looking at how well current models can deal with various semantic challenges. Given stark differences between models proposed in different subfields, a broad perspective is needed to see how we could integrate them. I conclude that, while linguistic insights can guide the design of model architectures, future progress will require balancing the often conflicting demands of linguistic expressiveness and computational tractability.