In this task, you're given a paragraph and title from the research paper. Your task is to classify whether the given title is suitable or not for the research paper based on the given paragraph. Return "True" if title is proper according to paragraph else "False".

Paragraph: 1. Predicting infectious disease dynamics is a central challenge in disease ecology. Models 36 that can assess which individuals are most at risk of being exposed to a pathogen not only 37 provide valuable insights into disease transmission and dynamics but can also guide 38 management interventions. Constructing such models for wild animal populations, 39 however, is particularly challenging; often only serological data is available on a subset 40 of individuals and non-linear relationships between variables are common. 41 42 2. Here we take advantage of the latest advances in statistical machine learning to construct 43 pathogen-risk models that automatically incorporate complex non-linear relationships 44 with minimal statistical assumptions from ecological data with missing values. Our 45 approach compares multiple machine learning algorithms in a unified environment to 46 find the model with the best predictive performance and uses game theory to better 47 interpret results. We apply this framework on two major pathogens that infect African 48 lions: canine distemper virus (CDV) and feline parvovirus. 49 50 3. Our modelling approach provided enhanced predictive performance compared to more 51 traditional approaches, as well as new insights into disease risks in a wild population. We 52 were able to efficiently capture and visualise strong non-linear patterns, as well as model 53 complex interactions between variables in shaping exposure risk from CDV and feline 54 parvovirus. For example, we found that lions were more likely to be exposed to CDV at a 55 young age but only in low rainfall years. 56 57 . CC-BY-NC-ND 4.0 International license is made available under a The copyright holder for this preprint (which was not peer-reviewed) is the author/funder. It . https://doi.org/10.1101/569012 doi: bioRxiv preprint 3 4. When combined with our data calibration approach, our framework helped us to answer 58 questions about risk of pathogen exposure which are difficult to address with previous 59 methods. Our framework not only has the potential to aid in predicting disease risk in 60 animal populations, but also can be used to build robust predictive models suitable for 61 other ecological applications such as modelling species distribution or diversity patterns.
Title: How to make more from exposure data? An integrated machine Author Contributions Data Accessibility Statement Running Title Machine learning and pathogen exposure risk
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Paragraph: Autoimmune retinopathy (AIR) is a rare immune-mediated retinopathy associated with circulating antiretinal antibodies (ARAs). Other prominent features of AIR include visual field deficits and photoreceptor dysfunction in the setting of progressive unexplained vision loss. The role of inflammation is poorly understood in AIR. Since cytokines play a central role in the initiation and development of inflammation, we evaluated the presence of proinflammatory cytokines and chemokines in AIR patient sera. We demonstrate that IL-6 and CXCL9 are both elevated in AIR patient sera. Moreover, the presence and concentration of these 2 molecules appear to correlate with AIR patient disease severity. This cytokine profile, IL-6 and CXCL9, has been described to participate in a variety of autoimmune and inflammatory diseases. Our study provides support for an activated inflammatory process in AIR and identifies possible mechanisms that can drive autoimmunity in this disease.
Title: Elevated serum levels of IL-6 and CXCL9 in autoimmune retinopathy (AIR) patients
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Paragraph: In this contribution, the classification of protein binding sites using the physicochemical properties exposed to their pockets is presented. We recently introduced Cavbase, a method for describing and comparing protein binding pockets on the basis of the geometrical and physicochemical properties of their active sites. Here, we present algorithmic and methodological enhancements in the Cavbase property description and in the cavity comparison step. We give examples of the Cavbase similarity analysis detecting pronounced similarities in the binding sites of proteins unrelated in sequence. A similarity search using SARS M pro protease subpockets as queries retrieved ligands and ligand fragments accommodated in a physicochemical environment similar to that of the query. This allowed the characterization of the protease recognition pockets and the identification of molecular building blocks that can be incorporated into novel antiviral compounds. A cluster analysis procedure for the functional classification of binding pockets was implemented and calibrated using a diverse set of enzyme binding sites. Two relevant protein families, the a-carbonic anhydrases and the protein kinases, are used to demonstrate the scope of our cluster approach. We propose a relevant classification of both protein families, on the basis of the binding motifs in their active sites. The classification provides a new perspective on functional properties across a protein family and is able to highlight features important for potency and selectivity. Furthermore, this information can be used to identify possible cross-reactivities among proteins due to similarities in their binding sites.
Title: From the Similarity Analysis of Protein Cavities to the Functional Classification of Protein Families Using Cavbase Keywords: protein binding pockets; classification of protein binding pockets; cluster analysis of protein binding pockets; protein kinases; SARS protease
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