In this task, you are given the abstract of a research paper. Your task is to generate a summary of this abstract. Your summary should not be very short, but it's better if it's not more than 30 words.

Example Input: One of the main challenges in applying graph convolutional neural networks on gene-interaction data is the lack of understanding of the vector space to which they belong and also the inherent difficulties involved in representing those interactions on a significantly lower dimension, viz Euclidean spaces. The challenge becomes more prevalent when dealing with various types of heterogeneous data. We introduce a systematic, generalized method, called iSOM-GSN, used to transform ''multi-omic'' data with higher dimensions onto a two-dimensional grid. Afterwards, we apply a convolutional neural network to predict disease states of various types. Based on the idea of Kohonen's self-organizing map, we generate a two-dimensional grid for each sample for a given set of genes that represent a gene similarity network. We have tested the model to predict breast and prostate cancer using gene expression, DNA methylation and copy number alteration, yielding prediction accuracies in the 94-98% range for tumor stages of breast cancer and calculated Gleason scores of prostate cancer with just 11 input genes for both cases. The scheme not only outputs nearly perfect classification accuracy, but also provides an enhanced scheme for representation learning, visualization, dimensionality reduction, and interpretation of the results.
Example Output: This paper presents a deep learning model that combines self-organizing maps and convolutional neural networks for representation learning of multi-omics data

Example Input: We study the problem of learning and optimizing through physical simulations via differentiable programming. We present DiffSim, a new differentiable programming language tailored for building high-performance differentiable physical simulations. We demonstrate the performance and productivity of our language in gradient-based learning and optimization tasks on 10 different physical simulators. For example, a differentiable elastic object simulator written in our language is 4.6x faster than the hand-engineered CUDA version yet runs as fast, and is 188x faster than TensorFlow. Using our differentiable programs, neural network controllers are typically optimized within only tens of iterations. Finally, we share the lessons learned from our experience developing these simulators, that is, differentiating physical simulators does not always yield useful gradients of the physical system being simulated. We systematically study the underlying reasons and propose solutions to improve gradient quality.
Example Output: We study the problem of learning and optimizing through physical simulations via differentiable programming, using our proposed DiffSim programming language and compiler.

Example Input: A structured understanding of our world in terms of objects, relations, and hierarchies is an important component of human cognition. Learning such a structured world model from raw sensory data remains a challenge. As a step towards this goal, we introduce Contrastively-trained Structured World Models (C-SWMs). C-SWMs utilize a contrastive approach for representation learning in environments with compositional structure. We structure each state embedding as a set of object representations and their relations, modeled by a graph neural network. This allows objects to be discovered from raw pixel observations without direct supervision as part of the learning process. We evaluate C-SWMs on compositional environments involving multiple interacting objects that can be manipulated independently by an agent, simple Atari games, and a multi-object physics simulation. Our experiments demonstrate that C-SWMs can overcome limitations of models based on pixel reconstruction and outperform typical representatives of this model class in highly structured environments, while learning interpretable object-based representations.
Example Output:
Contrastively-trained Structured World Models (C-SWMs) learn object-oriented state representations and a relational model of an environment from raw pixel input.