In this task, you are given the abstract of a research paper. Your task is to generate a summary of this abstract. Your summary should not be very short, but it's better if it's not more than 30 words.

Input: Consider Input: We develop a stochastic whole-brain and body simulator of the nematode roundworm Caenorhabditis elegans (C. elegans) and show that it is sufficiently regularizing to allow imputation of latent membrane potentials from partial calcium fluorescence imaging observations. This is the first attempt we know of to ''complete the circle,'' where an anatomically grounded whole-connectome simulator is used to impute a time-varying ''brain'' state at single-cell fidelity from covariates that are measurable in practice. Using state of the art Bayesian machine learning methods to condition on readily obtainable data, our method paves the way for neuroscientists to recover interpretable connectome-wide state representations, automatically estimate physiologically relevant parameter values from data, and perform simulations investigating intelligent lifeforms in silico.

Output: We develop a whole-connectome and body simulator for C. elegans and demonstrate joint state-space and parameter inference in the simulator.

Input: Consider Input: Deep neural networks have led to a series of breakthroughs, dramatically improving the state-of-the-art in many domains. The techniques driving these advances, however, lack a formal method to account for model uncertainty. While the Bayesian approach to learning provides a solid theoretical framework to handle uncertainty, inference in Bayesian-inspired deep neural networks is difficult. In this paper, we provide a practical approach to Bayesian learning that relies on a regularization technique found in nearly every modern network, batch normalization. We show that training a deep network using batch normalization is equivalent to approximate inference in Bayesian models, and we demonstrate how this finding allows us to make useful estimates of the model uncertainty. Using our approach, it is possible to make meaningful uncertainty estimates using conventional architectures without modifying the network or the training procedure. Our approach is thoroughly validated in a series of empirical experiments on different tasks and using various measures, showing it to outperform baselines on a majority of datasets with strong statistical significance.

Output: We show that training a deep network using batch normalization is equivalent to approximate inference in Bayesian models, and we demonstrate how this finding allows us to make useful estimates of the model uncertainty in conventional networks.

Input: Consider Input: Graph neural networks have shown promising results on representing and analyzing diverse graph-structured data such as social, citation, and protein interaction networks. Existing approaches commonly suffer from the oversmoothing issue, regardless of whether policies are edge-based or node-based for neighborhood aggregation. Most methods also focus on transductive scenarios for fixed graphs, leading to poor generalization performance for unseen graphs. To address these issues, we propose a new graph neural network model that considers both edge-based neighborhood relationships and node-based entity features, i.e. Graph Entities with Step Mixture via random walk (GESM). GESM employs a mixture of various steps through random walk to alleviate the oversmoothing problem and attention to use node information explicitly. These two mechanisms allow for a weighted neighborhood aggregation which considers the properties of entities and relations. With intensive experiments, we show that the proposed GESM achieves state-of-the-art or comparable performances on four benchmark graph datasets comprising transductive and inductive learning tasks. Furthermore, we empirically demonstrate the significance of considering global information. The source code will be publicly available in the near future.
Output: Simple and effective graph neural network with mixture of random walk steps and attention