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How to teach a rabbit not to scratch
Approach your rabbit slowly.
Rabbits are less domesticated than many animals you may be accustomed to dealing with. While your cat is not intimidated by you as you approach, a rabbit likely is.
In order to establish that you are not a threat to your rabbit, take your time with it. Start by sitting next to the rabbit while it is still in its cage and let it get accustomed to your presence.