pinecone/core-2020-05-10-deduplication huggingface dataset:
Predicting zooplankton response to environmental changes in a temperate estuarine ecosystem

Abstract  A novel strategy that allows to predict the responses of zooplanktonic species to environmental conditions in an estuarine temperate ecosystem (Mondego estuary) is presented. It uses 12 indicator species from the zooplanktonic Mondego database (102 species) that are common members of the different habitats, characterized by their specific hydrological conditions. Indicator-species analysis (ISA) was used to define and describe which species were typical of each of the five sampling stations in a 4-year study (2003–2006). First, a canonical correspondence analysis (CCA) was carried out to objectively identify the species-habitat affinity based on the relationship between species, stations and environmental data. Response curves for each of the zooplanktonic species, generated by univariate logistic regression on each of the independent variables temperature and salinity, were generally in agreement with the descriptive statistics concerning the occurrence of those species in this particular estuarine ecosystem. Species-specific models that predict probability of occurrence relative to environmental parameters like salinity, water temperature, turbidity, chlorophyll a, total suspended solids and dissolved oxygen were then developed for the zooplanktonic species. The multiple logistic models used contained between 1 and 3 significant parameters and the percentage correctly predicted was moderate to high, ranging from 62 to 95%. The predictive accuracy of the model was assured by direct comparison of model predictions with the observed occurrence of species obtained in 2006 (validation) and from data collected in the early 2000s in another Portuguese estuary—Ria de Aveiro (Canal de Mira), a complex mesotidal shallow coastal lagoon. The regression logistic model here defined, correctly suggested that the distribution of zooplankton species was mainly dependent on salinity and water temperature. The logistic regression proved to be a useful approach for predicting the occurrence of species under varying environmental conditions at a local scale. Therefore, this model can be considered of reasonable application (and should be tested in other estuarine systems) due to its ability to predict the occurrence of individual zooplanktonic species associated with habitat changes.http://dx.doi.org/10.1007/s00227-008-1052-
Dexamethasone induces the secretion of annexin I in immature lymphoblastic cells by a calcium-dependent mechanism

The mechanisms by which glucocorticoids (GC) regulate annexin I (ANXA1) secretion in different cells are still a matter of debate. The aims of this study were to evaluate the ability of dexamethasone (Dex) to induce ANXA1 secretion and to investigate the roles of the intracellular free Ca2+ concentration ([Ca2+]i), and of the GC receptor, on that process. For this purpose, the human immature lymphoblastic CCRF-CEM cell line was used. Treatment of the cells with Dex, for up to 4 h, significantly reduced the intracellular content of ANXA1 and increased the amount of this protein bound to the outer surface of the plasma membrane, whereas exposure of cells to Dex, for 12 h, induced the synthesis of ANXA1. At the same short time periods, Dex also induced a significant increase in the [Ca2+]i. Incubation of the cells with BAPTA-AM (10 µM), a cell-permeant high affinity Ca2+ chelator, completely inhibited Dex-induced ANXA1 secretion. Furthermore, the Ca2+ ionophore, ionomycin, alone induced ANXA1 cleavage, but not its secretion. Additionally, we used brefeldin A to investigate the involvement of the classical endoplasmic reticulum (ER)-Golgi pathway of protein secretion in the release of ANXA1. The GC receptor antagonist, RU486, neither reverted the Dex-dependent ANXA1 secretion nor inhibited the increase of the [Ca2+]i induced by Dex. Together, our results indicate that Dex induces ANXA1 synthesis and secretion in CCRF-CEM cells. ANXA1 secretion in this cell type show the following characteristics: (i) is unlikely to involve the classical ER-Golgi pathway; (ii) requires a Ca2+-dependent cleavage of ANXA1; (iii) involves both Ca2+-dependent and independent mechanisms; and (iv) is apparently independent of the GC receptor alpha isoform.http://dx.doi.org/10.1023/A:101650212013
The situational factors that affect the software development process: Towards a comprehensive reference framework

Context\ud
An optimal software development process is regarded as being dependent on the situational characteristics of individual software development settings. Such characteristics include the nature of the application(s) under development, team size, requirements volatility and personnel experience. However, no comprehensive reference framework of the situational factors affecting the software development process is presently available.\ud
Objective\ud
The absence of such a comprehensive reference framework of the situational factors affecting the software development process is problematic not just because it inhibits our ability to optimise the software development process, but perhaps more importantly, because it potentially undermines our capacity to ascertain the key constraints and characteristics of a software development setting.\ud
Method\ud
To address this deficiency, we have consolidated a substantial body of related research into an initial reference framework of the situational factors affecting the software development process. To support the data consolidation, we have applied rigorous data coding techniques from Grounded Theory and we believe that the resulting framework represents an important contribution to the software engineering field of knowledge.\ud
Results\ud
The resulting reference framework of situational factors consists of 8 classifications and 44 factors that inform the software process. We believe that the situational factor reference framework presented herein represents a sound initial reference framework for the key situational elements affecting the software process definition.\ud
Conclusion\ud
In addition to providing a useful reference listing for the research community and for committees engaged in the development of standards, the reference framework also provides support for practitioners who are challenged with defining and maintaining software development processes. Furthermore, this framework can be used to develop a profile of the situational characteristics of a software development setting, which in turn provides a sound foundation for software development process definition and optimisation
Organic matter accumulation during the Holocene in the\ud
Guadalquivir marshlands (SW Spain)

The distribution of biomarker compounds and magnetic susceptibility observed in the sediment from a 20 m core drilled in the\ud
marshlands of the estuarine region of the Guadalquivir River (southwest coast of Spain) has allowed us to reconstruct the\ud
palaeoenvironmental evolution of this area during the Holocene. Several organic compounds (n-alkanes, ra-ketones, n-alkanols,\ud
n-alkanoic acids and organic sulphur), as well as different biomarker ratios, have been used to show changing environmental\ud
conditions through time. These geochemical proxies suggest good preservation of the organic matter, although some diagenesis\ud
has occurred to particular organic compounds, especially the n-alkanoic acids. Our data indicate a major allochthonous supply of\ud
terrestrial plants, with less influence from aquatic plants or algae through the core. There are markedly different palaeoenvironmental\ud
conditions between the uppermost 5 m (last 6ka cal. B.P.) and the rest of the core. From 5 m (ca 6ka cal. B.P.) to 19 m\ud
(ca 8ka cal. B.P.) depth the palaeoenvironmental conditions were almost constant. Based on organic sulphur content and\ud
n-alkane content logs, anoxic conditions prevailed from 8 to 6ka cal. B.P., while oxic conditions with enhanced convection of\ud
water (prevalence of fluvial input), and consequently a greater organic matter supply, predominated in the upper 5 m of the core.\ud
Similarly, little variation in the magnetic susceptibility profile below 5 m indicates stable environmental conditions, while in the\ud
upper 5 m conditions shifted to one with elevated water input and clastic sediment supply. This is linked to palaeofloral\ud
alterations in the Guadiamar/Guadalquivir drainage basins and/or anthropogenic effects. We propose that from ca 8 to 6 ka cal.\ud
B.P. a stable landscape physiognomy in the surroundings of the estuarine area of the Guadalquivir River, with a predominance of\ud
pines and grassland. However, over the last 6ka cal. B.P. a variation in the terrestrial plant biomarker compounds suggests an\ud
alternation of relatively dry and humid phases and/or the impact of human populations on altering the vegetation community\ud
have occurred
Weak Equilibrium in a Spatial Model

Spatial models of two-player competition in spaces with more than one dimension almost never have pure-strategy Nash equilibria, and the study of the equilibrium positions, if they exist, yields a disappointing result: the two players must choose the same position to achieve equilibrium. In this work, a discrete game is proposed in which the existence of Nash equilibria is studied using a geometric argument. This includes a definition of equilibrium which is weaker than the classical one to avoid the uniqueness of the equilibrium position. As a result, a “region of equilibrium” appears, which can be located by geometric methods. In this area, the players can move around in an “almost-equilibrium” situation and do not necessarily have to adopt the same position
Pushover analysis for the seismic response prediction of cable-stayed bridges under multi-directional excitation

Cable-stayed bridges represent nowadays key points in transport networks and their seismic behavior needs to be fully understood, even beyond the elastic range of materials. Both nonlinear dynamic (NL-RHA) and static (pushover) procedures are currently available to face this challenge, each with intrinsic advantages and disadvantages, and their applicability in the study of the nonlinear seismic behavior of cable-stayed bridges is discussed here. The seismic response of a large number of finite element models with different span lengths, tower shapes and class of foundation soil is obtained with different procedures and compared. Several features of the original Modal Pushover Analysis (MPA) are modified in light of cable-stayed bridge characteristics, furthermore, an extension of MPA and a new coupled pushover analysis (CNSP) are suggested to estimate the complex inelastic response of such outstanding structures subjected to multi-axial strong ground motions
Diagnosing Causes of Water Scarcity in Complex Water Resources Systems and Identifying Risk Management Actions

From the water management perspective, water scarcity is an unacceptable risk of facing water shortages to serve water demands in the near future. Water scarcity may be temporary and related to drought conditions or other accidental situation, or may be permanent and due to deeper causes such as excessive demand growth, lack of infrastructure for water storage or transport, or constraints in water management. Diagnosing the causes of water scarcity in complex water resources systems is a precondition to adopt effective drought risk management actions. In this paper we present four indices which have been developed to evaluate water scarcity. We propose a methodology for interpretation of index values that can lead to conclusions about the reliability and vulnerability of systems to water scarcity, as well as to diagnose their possible causes and to propose solutions. The described methodology was applied to the Ebro river basin, identifying existing and expected problems and possible solutions. System diagnostics, based exclusively on the analysis of index values, were compared with the known reality as perceived by system managers, validating the conclusions in all case
Hysteresis phenomena in transverse galloping of triangular cross-section bodies

Transverse galloping is a type of aeroelastic instability characterised by large amplitude, low frequency oscillation of a structure in the direction normal to the mean wind direction. It normally appears in bodies with small stiffness and structural damping, provided the incident flow velocity is high enough. In the simplest approach transverse galloping can be considered as a one-degree-of-freedom oscillator subjected to aerodynamic forces, which in turn can be described by using a quasi-steady description. In this frame it has been demonstrated that hysteresis phenomena in transverse galloping is related to the existence of inflection points in the curve giving the dependence with the angle of attack of the aerodynamic coefficient normal to the incident flow. Aiming at experimentally checking such a relationship between these inflection points and hysteresis, wind tunnel experiments have been conducted. Experiments have been restricted to isosceles triangular cross-section bodies, whose galloping behaviour is well documented. Experimental results show that, according to theoretical predictions, hysteresis takes place at the angles of attack where there are inflection points in the lift coefficient curve, provided that the body is prone to gallop at these angles of attack
On the flexural vibration of cylinders under axial loads:Numerical and experimental study

The flexural vibration of a homogeneous isotropic linearly elastic cylinder of any aspect ratio is analysed in this paper. Natural frequencies of a cylinder under uniformly distributed axial loads acting on its bases are calculated numerically by the Ritz method with terms of power series in the coordinate directions as approximating functions. The effect of axial loads on the flexural vibration cannot be described by applying infinitesimal strain theory, therefore, geometrically nonlinear strain–displacement relations with second-order terms are considered here. The natural frequencies of free–free, clamped–clamped, and sliding–sliding cylinders subjected to axial loads are calculated using the proposed three-dimensional Ritz approach and are compared with those obtained with the finite element method and the Bernoulli–Euler theory. Different experiments with cylinders axially compressed by a hydraulic press are carried out and the experimental results for the lowest flexural frequency are compared with the numerical results. An approach based on the Ritz formulation is proposed for the flexural vibration of a cylinder between the platens of the press with constraints varying with the intensity of the compression. The results show that for low compressions the cylinder behaves similarly to a sliding–sliding cylinder, whereas for high compressions the cylinder vibrates as a clamped–clamped one
A stochastic model updating method for parameter variability quantification based on response surface models and Monte Carlo simulation

Stochastic model updating must be considered for quantifying uncertainties inherently existing in real-world engineering structures. By this means the statistical properties,instead of deterministic values, of structural parameters can be sought indicating the parameter variability. However, the implementation of stochastic model updating is much more complicated than that of deterministic methods particularly in the aspects of theoretical complexity and low computational efficiency. This study attempts to propose a simple and cost-efficient method by decomposing a stochastic updating process into a series of deterministic ones with the aid of response surface models and Monte Carlo simulation. The response surface models are used as surrogates for original FE models in the interest of programming simplification, fast response computation and easy inverse optimization. Monte Carlo simulation is adopted for generating samples from the assumed or measured probability distributions of responses. Each sample corresponds to an individual deterministic inverse process predicting the deterministic values of parameters. Then the parameter means and variances can be statistically estimated based on all the parameter predictions by running all the samples. Meanwhile, the analysis of variance approach is employed for the evaluation of parameter variability significance. The proposed method has been demonstrated firstly on a numerical beam and then a set of nominally identical steel plates tested in the laboratory. It is found that compared with the existing stochastic model updating methods, the proposed method presents similar accuracy while its primary merits consist in its simple implementation and cost efficiency in response computation and inverse optimization
Analysis of road safety incentives in highway concessions in Spain

Public Private Partnerships (PPPs) are mostly implemented for three reasons: to circumvent budgetary constraints, encourage efficiency and improvement of quality in the provision of public infrastructure. One of the ways of reaching the latter objective is by the introduction of performance-based standards tied to bonuses and penalties to reward or punish the performance of the contractor. These performance based standards often refer to different aspects such as technical, environmental and safety issues. This paper focuses on the implementation of safety based incentives in PPPs. The main aim of this paper is to analyze whether the incentives to improve road safety in PPPs are effective in improving safety ratios in Spain. To this end, negative binomial regression models have been applied using information from the Spanish high capacity network in 2006. The findings indicate that even though road safety is highly influenced by variables that are not much controllable by the contractor such as the Average Annual Daily Traffic and the percentage of heavy vehicles in the highway, the implementation of safety incentives in PPPs has a positive influence in the reduction of fatalities, injuries and accidents
Asymptotic stability of a mathematical model of cell population

We consider a simplified system of a growing colony of cells described as a free boundary problem. The system consists of two hyperbolic equations of first order coupled to an ODE to describe the behavior of the boundary. The system for cell populations includes non-local terms of integral type in the coefficients. By introducing a comparison with solutions of an ODE's system, we show that there exists a unique homogeneous steady state which is globally asymptotically stable for a range of parameters under the assumption of radially symmetric initial data
Determination of pH dependent antioxidant activity of Palm (Borassus flabellifer) Polyphenol compounds by Photoluminol and DPPH methods -A Comparison redox-reaction Sensitivity

Palm juice (Borassus flabellifer) is one of the most common and cheap natural juices. Fermented palm juice contains various phytochemical compounds that exhibit antioxidant activity. In the present study, we examined the effects of pH on the production of phytochemicals and their antioxidant activity during the fermentation process. The concentration of total phenolics and flavonoid compounds of fermented palm juice and their antioxidant activity were investigated at various pH. The results showed that total phenolics concentration and antioxidant activity of palm wine and palm vinegar increase as pH increases: 3.54.55.5. Maximum flavonoid concentration was obtained at pH 6.5. Measurements of antioxidant activity by conventional DPPH method and Photochem antioxidant analyzer technique were highly correlated, with a corresponding R2 value of 0.94
Low initial aspect-ratio direct-drive target designs for shock- or self-ignition in the context of the laser Megajoule

Analysis of low initial aspect ratio direct-drive target designs is carried out by varying the implosion velocity and the fuel mass. Starting from two different spherical targets with a given 300?g-DT mass, optimization of laser pulse and drive power allows to obtain a set of target seeds referenced by their peak implosion velocities and initial aspect ratio (A = 3 and A = 5). Self-ignition is achieved with higher implosion velocity for A = 5-design than for A = 3-design. Then, rescaling is done to extend the set of designs to a huge amount of mass, peak kinetic energies and peak areal densities. Self-ignition kinetic energy threshold Ek is characterized by a dependance of Ek ? v? with ?-values which depart from self-ignition models. Nevertheless, self-ignition energy is seen lower for smaller initial aspect ratio. An analysis of Two-Plasmons Decay threshold and Rayleigh?Taylor instability e-folding is carried out and it is shown that two-plasmon decay threshold is always overpassed for all designs. The hydrodynamic stability analysis is performed by embedded models to deal with linear and non-linear regime. It is found that the A = 5-designs are always at the limit of disruption of the shell
Development of a full hybrid lighting-CPV prototype and savings in a real case operation

A full Hybrid lighting-CPV prototype has been assembled. This new concept mixes a classical CPV module with the production of light for illumination without a double conversion (solar energy to electricity and electricity to light) allowing a higher efficiency to the whole system. The present prototype is based on a commercial CPV module that has been adapted in order to be hybrid, adjusting the receivers to pass the fibers into the module, inserting a holder to adjust x,y and z position of the fibers and changing the original parquet of lenses by a bifocal one composed most of the original lenses and the inclusion of other lenses in the position of the corners. Results show that with a minimal loss in the CPV part, a luminous flux is obtained that can be used to illuminate. Adding an additional electrical lamp and a light sensor that enables this lamp when no light from the sun is received, a 38% saving on lighting electricity is expected in Madrid during a year
Linear active disturbance rejection control of the hovercraft vessel model

A linearizing robust dynamic output feedback control scheme is proposed for earth coordinate position variables trajectory tracking tasks in a hovercraft vessel model. The controller design is carried out using only position and orientation measurements. A highly simplified model obtained from flatness considerations is proposed which vastly simplifies the controller design task. Only the order of integration of the input-to-flat output subsystems, along with the associated input matrix gain, is retained in the simplified model. All the unknown additive nonlinearities and exogenous perturbations are lumped into an absolutely bounded, unstructured, vector of time signals whose components may be locally on-line estimated by means of a high gain Generalized Proportional Integral (GPI) observer. GPI observers are the dual counterpart of GPI controllers providing accurate simultaneous estimation of each flat output associated phase variables and of the exogenous and endogenous perturbation inputs. These observers exhibit remarkably convenient self-updating internal models of the unknown disturbance input vector components. These two key pieces of on-line information are used in the proposed feedback controller to conform an active disturbance rejection, or disturbance accommodation, control scheme. Simulation results validate the effectiveness of the proposed design method