import dataclasses from typing import Any, Dict, List import datasets from pytorch_ie.core import ( Annotation, AnnotationLayer, AnnotationList, annotation_field, ) from pytorch_ie.documents import TextBasedDocument from pie_datasets import GeneratorBasedBuilder @dataclasses.dataclass(eq=True, frozen=True) class AbstractiveSummary(Annotation): """A question about a context.""" text: str def __str__(self) -> str: return self.text @dataclasses.dataclass(eq=True, frozen=True) class SectionName(Annotation): """A question about a context.""" text: str def __str__(self) -> str: return self.text @dataclasses.dataclass class ScientificPapersDocument(TextBasedDocument): """A PIE document for scientific papers dataset.""" abstract: AnnotationLayer[AbstractiveSummary] = annotation_field() section_names: AnnotationList[SectionName] = annotation_field() def example_to_document( example: Dict[str, Any], ) -> ScientificPapersDocument: """Convert a Huggingface Scientific Papers example to a PIE document.""" document = ScientificPapersDocument( text=example["article"], ) document.abstract.append(AbstractiveSummary(text=example["abstract"])) document.section_names.extend( [SectionName(text=section_name) for section_name in example["section_names"].split("\n")] ) return document def document_to_example(doc: ScientificPapersDocument) -> Dict[str, Any]: """Convert a PIE document to a Huggingface Scientific Papers example.""" example = { "article": doc.text, "abstract": doc.abstract[0].text, "section_names": "\n".join([section_name.text for section_name in doc.section_names]), } return example class ScientificPapersConfig(datasets.BuilderConfig): """BuilderConfig for Scientific Papers.""" def __init__(self, **kwargs): """BuilderConfig for Scientific Papers. Args: **kwargs: keyword arguments forwarded to super. """ super().__init__(**kwargs) class ScientificPapers(GeneratorBasedBuilder): DOCUMENT_TYPE = ScientificPapersDocument BASE_DATASET_PATH = "scientific_papers" BASE_DATASET_REVISION = "14c5296f2d707630f5835c9da59dcaddeea19b20" BUILDER_CONFIGS = [ ScientificPapersConfig( name="arxiv", version=datasets.Version("1.1.1"), description="Scientific Papers dataset - ArXiv variant", ), ScientificPapersConfig( name="pubmed", version=datasets.Version("1.1.1"), description="Scientific Papers dataset - PubMed variant", ), ] DEFAULT_CONFIG_NAME = "arxiv" def _generate_document(self, example, **kwargs): return example_to_document(example) def _generate_example(self, document, **kwargs): return document_to_example(document)