[tab] genie.py (python)
from typing import Dict, Any

from orbax.checkpoint import PyTreeCheckpointer
import jax
import jax.numpy as jnp
import flax.linen as nn

from models.dynamics import DynamicsMaskGIT
from models.lam import LatentActionModel
from models.tokenizer import TokenizerVQVAE


class Genie(nn.Module):
    """Genie model"""

    # --- Tokenizer ---
    in_dim: int
    tokenizer_dim: int
    latent_patch_dim: int
    num_patch_latents: int
    patch_size: int
    tokenizer_num_blocks: int
    tokenizer_num_heads: int
    # --- LAM ---
    lam_dim: int
    latent_action_dim: int
    num_latent_actions: int
    lam_patch_size: int
    lam_num_blocks: int
    lam_num_heads: int
    # --- Dynamics ---
    dyna_dim: int
    dyna_num_blocks: int
    dyna_num_heads: int
    dropout: float = 0.0
    mask_limit: float = 0.0

    def setup(self):
        self.tokenizer = TokenizerVQVAE(
            in_dim=self.in_dim,
            model_dim=self.tokenizer_dim,
            latent_dim=self.latent_patch_dim,
            num_latents=self.num_patch_latents,
            patch_size=self.patch_size,
            num_blocks=self.tokenizer_num_blocks,
            num_heads=self.tokenizer_num_heads,
            dropout=0.0,
            codebook_dropout=0.0,
        )
        self.lam = LatentActionModel(
            in_dim=self.in_dim,
            model_dim=self.lam_dim,
            latent_dim=self.latent_patch_dim,
            num_latents=self.num_latent_actions,
            patch_size=self.lam_patch_size,
            num_blocks=self.lam_num_blocks,
            num_heads=self.lam_num_heads,
            dropout=0.0,
            codebook_dropout=0.0,
        )
        self.dynamics = DynamicsMaskGIT(
            model_dim=self.dyna_dim,
            num_latents=self.num_patch_latents,
            num_blocks=self.dyna_num_blocks,
            num_heads=self.dyna_num_heads,
            dropout=self.dropout,
            mask_limit=self.mask_limit,
        )

    def __call__(self, batch: Dict[str, Any], training: bool = True) -> Dict[str, Any]:
        tokenizer_outputs = self.tokenizer.vq_encode(batch["videos"], training=False)
        lam_outputs = self.lam.vq_encode(batch["videos"], training=False)
        outputs = dict(
            video_tokens=jax.lax.stop_gradient(tokenizer_outputs["indices"]),
            latent_actions=jax.lax.stop_gradient(lam_outputs["z_q"]),
        )
        outputs["mask_rng"] = batch["mask_rng"]
        dyna_outputs = self.dynamics(outputs, training)
        outputs.update(dyna_outputs)
        mle_indices = jnp.argmax(outputs["token_logits"], axis=-1)
        outputs["recon"] = self.tokenizer.decode(
            mle_indices, batch["videos"].shape[2:4]
        )
        return outputs
    

    @nn.compact
    def sample(
        self,
        batch: Dict[str, Any],
        steps: int = 25,
        temperature: int = 1,
        sample_argmax: bool = False,
    ) -> Any:
        # --- Encode videos and actions ---
        tokenizer_out = self.tokenizer.vq_encode(batch["videos"], training=False)
        token_idxs = tokenizer_out["indices"]
        new_frame_idxs = jnp.zeros_like(token_idxs)[:, 0]
        action_tokens = self.lam.vq.get_codes(batch["latent_actions"])

        # --- Initialize MaskGIT ---
        init_mask = jnp.ones_like(token_idxs, dtype=bool)[:, 0]
        init_carry = (
            batch["rng"],
            new_frame_idxs,
            init_mask,
            token_idxs,
            action_tokens,
        )
        MaskGITLoop = nn.scan(
            MaskGITStep,
            variable_broadcast="params",
            split_rngs={"params": False},
            in_axes=0,
            out_axes=0,
            length=steps,
        )

        # --- Run MaskGIT loop ---
        loop_fn = MaskGITLoop(
            dynamics=self.dynamics,
            tokenizer=self.tokenizer,
            temperature=temperature,
            sample_argmax=sample_argmax,
            steps=steps,
        )
        final_carry, _ = loop_fn(init_carry, jnp.arange(steps))
        new_frame_idxs = final_carry[1]
        new_frame_pixels = self.tokenizer.decode(
            jnp.expand_dims(new_frame_idxs, 1),
            video_hw=batch["videos"].shape[2:4],
        )
        return new_frame_pixels

    def vq_encode(self, batch, training) -> Dict[str, Any]:
        # --- Preprocess videos ---
        lam_output = self.lam.vq_encode(batch["videos"], training=training)
        return lam_output["indices"]

class MaskGITStep(nn.Module):
    dynamics: nn.Module
    tokenizer: nn.Module
    temperature: float
    sample_argmax: bool
    steps: int

    @nn.compact
    def __call__(self, carry, x):
        rng, token_idxs, mask, action_tokens = carry
        step = x
        N = token_idxs.shape[2]

        # --- Construct + encode video ---
        vid_embed = self.dynamics.patch_embed(token_idxs) # (B, S, N, D)
        mask_token = self.dynamics.mask_token  # (1, 1, 1, D,)
        mask_expanded = mask[..., None] # (B, S, N, 1) 
        vid_embed = jnp.where(mask_expanded, mask_token, vid_embed)

        # --- Predict transition ---
        act_embed = self.dynamics.action_up(action_tokens)
        vid_embed += jnp.pad(act_embed, ((0, 0), (1, 0), (0, 0), (0, 0)))
        unmasked_ratio = jnp.cos(jnp.pi * (step + 1) / (self.steps * 2))
        step_temp = self.temperature * (1.0 - unmasked_ratio)
        final_logits = self.dynamics.dynamics(vid_embed) / step_temp

        # --- Sample new tokens for final frame ---
        if self.sample_argmax:
            sampled_token_idxs = jnp.argmax(final_logits, axis=-1)
        else:
            rng, _rng = jax.random.split(rng)
            sampled_token_idxs = jnp.where(
                step == self.steps - 1,
                jnp.argmax(final_logits, axis=-1),
                jax.random.categorical(_rng, final_logits),
            )
        gather_fn = jax.vmap(jax.vmap(jax.vmap(lambda x, y: x[y])))
        final_token_probs = gather_fn(jax.nn.softmax(final_logits), sampled_token_idxs)
        final_token_probs += ~mask
        # Update masked tokens only
        token_idxs = jnp.where(mask, sampled_token_idxs, token_idxs)

        # --- Update mask ---
        num_unmasked_tokens = jnp.round(N * (1.0 - unmasked_ratio)).astype(int)
        idx_mask = jnp.arange(final_token_probs.shape[-1]) > num_unmasked_tokens
        sorted_idxs = jnp.argsort(final_token_probs, axis=-1, descending=True)
        mask_update_fn = jax.vmap(lambda msk, ids: msk.at[ids].set(idx_mask))
        new_mask = mask_update_fn(mask, sorted_idxs)

        new_carry = (rng, token_idxs, new_mask, action_tokens)
        return new_carry, None

def restore_genie_components(params: Dict[str, Any], tokenizer: str, lam: str):
    """Restore pre-trained Genie components"""
    params["params"]["tokenizer"].update(
        PyTreeCheckpointer().restore(tokenizer)["model"]["params"]["params"]
    )
    params["params"]["lam"].update(
        PyTreeCheckpointer().restore(lam)["model"]["params"]["params"]
    )
    return params