List of sequenced animal genomes

This list of **sequenced animal genomes** contains animal species for which complete genome sequences have been assembled, annotated, and published.

## Porifera
* *Amphimedon queenslandica*, a sponge (2009)
* *Stylissa carteri* (2016)
* *Xestospongia testudinaria* (2016)

## Ctenophora
* *Mnemiopsis leidyi* (Ctenophora), (order Lobata) (2012)/2013
* *Pleurobrachia bachei* (Ctenophora) (2014)

## Placozoa
* *Trichoplax adhaerens*, a Placozoan (2008)
* *Hoilungia hongkongensis*, nov. gen H13 Placozoan (2018)

## Cnidaria
* *Hydra vulgaris*, (previously *Hydra magnipapillata*), a model hydrozoan (2010)
* *Nematostella vectensis*, a model anemone (starlet sea anemone) (2007)
* *Aiptasia pallida*, a sea anemone (2015)
* *Acropora digitifera*, a coral  (2011)
* Renilla muelleri, an octocoral (2017, 2019)
* *Stylophora pistillata*, a coral  (2017)
* *Aurelia aurita*, moon jellyfish (2019)
* *Clytia hemisphaerica, Hydrozoa jellyfish* (2019)
* *Pocillopora damicornis*, cauliflower coral (2018)
* *Nemopilema nomurai*, Nomura's jellyfish (2019)
* *Rhopilema esculentum*, flame jellyfish (2020)
* *Cassiopea xamachana* (Scyphozoa) (2019)
* *Alatina alata* (Cubozoa) (2019)
* *Calvadosia cruxmelitensis* (Staurozoa) (2019)
* *Dendronephthya gigantea*, an octocoral (2019)

## Deuterostomia
see: List of sequenced Deuterostomia genomes

## Protostomia
### Insects
* Order Blattodea
** *Blattella germanica*, German cockroach (2018)
** *Periplaneta americana*, American cockroach (2018)
** *Zootermopsis nevadensis*, a dampwood termite (2014)
** *Cryptotermes secundus*, a drywood termite(2018)
** *Macrotermes natalensis*, a higher termite (2014)
* Order Coleoptera
** *Dendroctonus ponderosae* Hopkins, beetle (mountain pine beetle) (2013)
** *Aquatica lateralis*, Japanese aquatic firefly "Heike-botaru" (firefly) (2018)
** *Photinus pyralis*, big dipper firefly (2018)
** *Protaetia brevitarsis*, White-spotted flower chafer (2019)
** *Tribolium castaneum* Strain:GA-2, beetle (red flour beetle) (2008)
* Order Diptera
** Family Calliphoridae
*** *Aldrichina grahami*, forensic blowfly (2020)
** Family Chironomidae
*** *Dasypogon diadema*, hunting robber fly (2019)
*** *Parochlus steinend*, Antarctic winged midge (2017)
*** *Proctacanthus coquilletti*, assassin fly (2017)
** Family Culicidae (mosquitoes)
*** *Aedes aegypti* Strain:LVPib12, mosquito (vector of dengue fever etc) (2007)
*** *Aedes albopictus* (2015)
*** *Anopheles darlingi*
*** *Anopheles gambiae* Strain: PEST, mosquito (vector of malaria) (2002)
*** *Anopheles gambiae* Strain: M, mosquito (vector of malaria) (2010)
*** *Anopheles gambiae* Strain: S, mosquito (vector of malaria) (2010)
*** *Anopheles sinensis*, mosquito (vector of vivax malaria, lympahtic filariasis and *Setaria* infections), (2014)
*** *Anopheles stephensii*
*** *Anopheles arabiensis* (2015)
*** *Anopheles quadriannulatus* (2015)
*** *Anopheles merus* (2015)
*** *Anopheles melas* (2015)
*** *Anopheles christyi* (2015)
*** *Anopheles epiroticus* (2015)
*** *Anopheles maculatus* (2015)
*** *Anopheles culicifacies* (2015)
*** *Anopheles minimus* (2015)
*** *Anopheles funestus* (2019)
*** *Anopheles dirus* (2015)
*** *Anopheles farauti* (2015)
*** *Anopheles atroparvus* (2015)
*** *Anopheles sinensis* (2015)
*** *Anopheles albimanus* (2015)
*** *Culex quinquefasciatus*, mosquito (vector of West Nile virus, filariasis etc) (2010)
** Family Drosophilidae (fruit flies)
*** *Drosophila albomicans*, fruit fly (2012)
*** *Drosophila ananassae*, fruit fly (2007)
*** *Drosophila biarmipes*, fruit fly (2011)
*** *Drosophila bipectinata*, fruit fly (2011)
*** *Drosophila erecta*, fruit fly (2007)
*** *Drosophila elegans*, fruit fly (2011))
*** *Drosophila eugracilis*, fruit fly (2011)
*** *Drosophila ficusphila*, fruit fly (2011)
*** *Drosophila grimshawi*, fruit fly (2007)
*** *Drosophila kikkawai*, fruit fly (2011)
*** *Drosophila melanogaster*, fruit fly (model organism) (2000)
*** *Drosophila mojavensis*, fruit fly (2007)
*** *Drosophila neotestacea*, fruit fly (transcriptome 2014)
*** *Drosophila persimilis*, fruit fly (2007)
*** *Drosophila pseudoobscura*, fruit fly (2005)
*** *Drosophila rhopaloa*, fruit fly (2011)
*** *Drosophila santomea*, fruit fly (2018)
*** *Drosophila sechellia*, fruit fly (2008)
*** *Drosophila simulans*, fruit fly (2007)
*** *Drosophila takahashi*, fruit fly (2011)
*** *Drosophila virilis*, fruit fly (2007)
*** *Drosophila willistoni*, fruit fly (2007)
*** *Drosophila yakuba*, fruit fly (2007)
** Family Phoridae
*** *Megaselia abdita*, scuttle fly (transcriptome (2013)
** Family Psychodidae (drain flies)
*** *Clogmia albipunctata*, moth midge (transcriptome (2013)
** Family Sarcophagidae (flesh flies)
*** *Sarcophaga bullata*, Flesh fly (2019)
** Family Syrphidae (hoverflies)
*** *Episyrphus balteatus*, hoverfly transcriptome (2011)
* Order Hemiptera
** *Acyrthosiphon pisum*, aphid (pea aphid) (2010)
** *Ericerus pela*, Chinese wax scale insect (2019)
** *Laodelphax striatellus*, small brown planthopper (2017)
** *Lycorma delicatula*, spotted lanternfly (2019)
** *Rhodnius prolixus*, kissing-bug (2015)
** *Rhopalosiphum maidis*, Corn leaf aphid (2019)
** *Sitobion miscanthi*, Indian grain aphid (2019)
** *Triatoma rubrofasciata*, assassin bug (2019)
* Order Hymenoptera
** *Acromyrmex echinatior* colony Ae372, ant (Panamanian leafcutter) (2011))
** *Apis mellifera*, bee (honey bee), (model for eusocial behavior) (2006
** *Atta cephalotes*, ant (leaf-cutter ant) (2011)
** *Camponotus floridanus*, ant (2010)
** *Cerapachys biroi*, ant (clonal raider ant)(2014)
** *Harpegnathos saltator*, ant (2010)
** *Lasius niger*, ant (black garden ant)(2017)
** *Linepithema humile*, ant (Argentine ant) (2011)
** *Nasonia giraulti*, wasp (parasitoid wasp) (2010)
** *Nasonia longicornis*, wasp (parasitoid wasp) (2010)
** *Nasonia vitripennis*, wasp (parasitoid wasp; model organism) (2010)
** *Nomia Melanderi*, Alkali bee (2019)
** *Pogonomyrmex barbatus*, ant (red harvester ant) (2011)
** *Solenopsis invicta*, ant (fire ant) (2011)
* Order Lepidoptera
** *Antharaea yamamai*, Japanese oak silk moth (2019)
** *Bicyclus anynana*, squinting bush brown (2017)
** *Bombyx mori* Strain:p50T, moth (domestic silk worm) (2004)
** *Cydia pomonella*, codling moth (2019)
** *Danaus plexippus*, butterfly (monarch butterfly) (2011)
** *Heliconius melpomene*, butterfly (2012)
** *Melitaea cinxia*, Glanville fritillary butterfly (2014)
** *Megathymus ursus violae*, bear giant skipper butterfly (2018)
** *Papilio bianor*, Chinese peacock butterfly (2019)
** *Pieris rapae*, small cabbage white butterfly (2016)
** *Plutella xylostella*, moth (diamondback moth) (2013)
** *Spodoptera frugiperda*, Fall armyworm (2017)
** *Eudocima phalonia*, fruit-piercing moth (2017)
* Order Orthoptera
** *Locusta migratoria*, migratory locust (2014)
** *Schistocerca gregaria*, desert locust (2020)
* Order Phthiraptera
** *Pediculus humanus*, louse (sucking louse; parasite) (2010)
* Order Trichoptera
** *Stenopsyche tienmushanensi*s, Caddisfly (2018)

### Crustaceans
* *Acartia tonsa dana*, cosmopolitan calanoid copepod (2019*)* 
* *Daphnia pulex*, water flea (2007)
* *Eulimnadia texana*, Clam Shrimp (2018)
* *Neocaridina denticulata*, shrimp (2014)
* *Parhyale hawaiensis*, amphipod (2016)
* *Portunus trituberculatus*, swimming crab (2020)
* *Procambarus virginalis*, marbled crayfish (2018)
* *Tigriopus kingsejongensis*, antarctic-endemic copepod (2017*)*

### Chelicerates
* *Limulus polyphemus*, Atlantic horseshoe crab (2014)
* *Carcinoscorpius rotundicauda*, mangrove horseshoe crab (2020)

Of which Arachnids:
* *Acanthoscurria geniculata*, Brazilian whiteknee tarantula (2014)
* *Dysdera silvatica*, Canary Island nocturnal endemic woodlouse spider (2019)
* *Ixodes scapularis*, (deer tick) (2016)
* *Mesobuthus martensii*, Chinese scorpion (2013)
* *Nephila clavipes*, (golden silk orb-weaver) (2017)
* *Parasteatoda tepidariorum*, (common house spider) (2017)
* *Stegodyphus mimosarum*, African social velvet spider (2014)
* *Tetranychus urticae*, spider mite (2011)
* *Tropilaelaps mercedesae*, (honeybee mite) (2017)

### Myriapoda
* *Strigamia maritima*, centipede

### Tardigrades
* *Hypsibius dujardini*, water bear (2015)

### Molluscs
* *Achatina fulica*, giant African snail (2019)
* *Architeuthis dux*, giant squid (2020)
* *Argopecten purpuratus*, peruvian scallop (2018)
* *Bathymodiolus platifrons*, seep mussel (2017
* *Biomphalaria glabrata*, a medically-important air-breathing freshwater snail in the family Planorbidae (2017)
* *Chlamys farreri*, Zhikong scallop (2017)
* *Crassostrea gigas*, Pacific oyster (2012)
* *Dreissena rostriformis*, Quagga mussel (2019)
* *Euprymna scolopes*, Hawaiian bobtail squid (2019)
* *Elysia chlorotica*, a solar-powered sea slug (2019)
* *Haliotis discus hannai*, pacific abalone (2017)
* *Lottia gigantea*, owl limpet (2013)
* *Limnoperna fortunei*, invasive golden mussel (2017)
* *Modiolus philippinarum*, shallow water mussel (2017)
* *Mytilus galloprovincialis*, Mediterranean mussel (2016)
* *Octopus bimaculoides*, California two-spot octopus (2015)
* *Octopus minor*, common long-arm octopus *(2018*
* *Octopus vulgaris*, common octopus (2019)
* *Patinopecten yessoensis*, Yesso scallop (2017)
* *Pecten maximus*, Great scallop (2020)
* *Pinctada fucata*, Pearl oyster (2012)
* *Pomacea canaliculata*, golden apple snail (2018)
* *Ruditapes philippinarum*, Manila clam (2017)
* *Saccostrea glomerata*, Sydney rock oyster (2018)
* *Scapharca broughtonii*, Blood clam (2019)
* *Venustaconcha ellipsiformis*, freshwater mussel (2018)

### Platyhelminthes
* *Clonorchis sinensis*, liver fluke (human pathogen) (draft 2011)
* *Echinococcus granulosus*, tapeworm (dog pathogen) (2013, 2013)
* *Echinococcus multilocularis*, tapeworm (2013)
* *Hymenolepis microstoma*, tapeworm (2013)
* *Limnoperna fortunei*, golden mussel (2017)
* *Schistosoma haematobium*, schistosome (human pathogen) (2012 2019)
* *Schistosoma japonicum*, schistosome (human pathogen) (2009)
* *Schistosoma mansoni*, schistosome (human pathogen) (2009, 2012)
* *Schmidtea mediterranea*, planarian (model organism) (2006)
* *Taenia solium*, tapeworm (2013)

### Nematodes
* *Ancylostoma ceylanicum*, zoonotic hookworm infecting both humans and other mammals (2015)
* *Ascaris suum*, pig-infecting giant roundworm, closely related to human-infecting giant roundworm *Ascaris lumbricoides* (2011)
* *Brugia malayi* (Strain:TRS), human-infecting filarial parasite (2007)
* *Bursaphelenchus xylophilus*, infects pine trees (2011)
* *Caenorhabditis angaria* (Strain:PS1010) (2010)
* *Caenorhabditis brenneri*, a gonochoristic (male-female obligate) species more closely related to *C. briggsae* than *C. elegans*
* *Caenorhabditis briggsae* (2003)
* *Caenorhabditis elegans* (Strain:Bristol N2), model organism (1998)
* *Caenorhabditis remanei*, a gonochoristic (male-female obligate) species more closely related to *C. briggsae* than *C. elegans*
* *Dirofilaria immitis*, dog-infecting filarial parasite (2012)
* *Globodera pallida*, plant pathogen (2014)
* *Haemonchus contortus*, blood-feeding parasite infecting sheep and goats (2013)
* *Heterodera glycines*, soybean cyst nematode (2019)
* *Heterorhabditis bacteriophora*, (2013)
* *Loa loa*, human-infecting filarial parasite (2013)
* *Meloidogyne hapla*, northern root-knot nematode (plant pathogen) (2008)
* *Meloidogyne incognita*, southern root-knot nematode (plant pathogen) (2008)
* *Necator americanus*, human-infecting hookworm (2014)
* *Onchocerca volvulus*, human-infecting filarial parasite
* *Pristionchus pacificus*, model invertebrate (2008)
* *Romanomermis culicivorax*, entomopathogenic nematode that invades larvae of various mosquito species (2013)
* *Schistosoma haematobium*, urinary blood fluke infecting humans (2019)
* *Trichuris suis*, pig-infecting whipworm (2014)
* *Trichuris muris*, mouse-infecting whipworm (2014)
* *Trichuris trichiura*, human-infecting whipworm (2014)
* *Wuchereria bancrofti*, human-infecting filarial parasite

### Annelids
* *Capitella teleta*, polychaete (2007, 2013)
* *Helobdella robusta*, leech (2007, 2013)
* *Eisenia fetida*, earthworm (2015, 2016)

### Brachiopoda
* *Lingula anatina*, brachiopod (2015,)

### Rotifera
* *Adineta vaga*, rotifer (2013,)

## Ctenophora
* *Mnemiopsis leidyi* (Ctenophora), (order Lobata) (2012/2013)
* *Pleurobrachia bachei* (Ctenophora) (2014)

## Placozoa
* *Trichoplax adhaerens*, a Placozoan (2008)
* *Hoilungia hongkongensis*, nov. gen H13 Placozoan (2018)

## References