List of sequenced Deuterostomia genomes

This list of **sequenced Deuterostomia genomes** contains species for which complete genome sequences have been assembled, annotated and published.

## Deuterostomia 
### Hemichordates 
* *Saccoglossus kowalevskii*, Enteropneusta (2015)
* *Ptychodera flava*, Enteropneusta (2015)
* *Apostichopus japonicus*, sea cucumber (2017)
* *Strongylocentrotus purpuratus*, a sea urchin and model deuterostome (2006)

### Tunicates
* *Ciona intestinalis*, a tunicate (2002)
* *Ciona savignyi*, a tunicate (2007)
* *Oikopleura dioica*, a larvacean (2001).

### Cephalochordates
* *Branchiostoma floridae*, a lancelet (2008)

### Cyclostomes
* *Petromyzon marinus*, a lamprey (2009, 2013)

### Cartilaginous fish
* *Callorhinchus milii*, an elephant shark (2007)
* *Rhincodon typus*, Whale shark (2017)
* *Carcharodon carcharias*, Great white shark ( *2018**)*
* *Chiloscyllium punctatum*, Brownbanded bamboo shark (2018)
* *Scyliorhinus torazame*, Cloudy catshark (2018)
* Order Beloniformes
** *Oryzias latipes*, medaka (2007)
* Order Centrarchiformes
** *Oplegnathus fasciatus*, barred knifejaw (2019) 
* Order Characiformes
** *Astyanax mexicanus*, Mexican tetra (2014)
* Order Cichliformes 
** *Oreochromis niloticus*, Nile tilapia (2019)
** *Metriaclima zeb*, Lake Malawi cichlid *(*2019)
** *Coilia nasus*, Japanese grenadier anchovy (2020)
** *Sardina pilchardus*, European sardine *(*2019)
* Order Coelacanthiformes
** *Latimeria chalumnae*, West Indian Ocean coelacanth and oldest known living lineage of Sarcopterygii (2013)
* Order Cypriniformes
** *Anabarilius grahami Regan*, Kanglang fish (2018)
** *Danio rerio*, a zebrafish (2007)
** *Heterandria formosa*, Least Killifish (2019)
** *Oxygymnocypris stewartii,(*2019)
** *Megalobrama amblycephala*, blunt snout bream (2017)
* Order Cyprinodontiformes
** *Heterandria formosa*, least killifish (2019)
** *Nothobranchius furzeri*,  turquoise killifish (2015)
* Order Esociformes
** *Esox lucius*, northern pike (2014)
* Order Gadiformes
** *Gadus morhua*, Atlantic cod (2011)
* Order Gasterosteiformes
** *Gasterosteus aculeatus*, three-spined stickleback (2006, 2012)
* Order Gymnotiformes
** *Electrophorus electricus*, electric eel (2014)
* Order Lepisosteiformes
** *Lepisosteus oculatus*, spotted gar
* Order Osmeriformes
** *Protosalanx hyalocranius*, clearhead icefish (2017)
* Order Perciformes
** *Channa argus*, northern snakehead (2017)
** *Dissostichus mawsoni*, Antarctic toothfish (2019)
** *Eleginops maclovinus*, Patagonian robalo (2019)
** *Lutjanus campechanus*, Northern red snapper (2020)
** *Parachaenichthys charcoti*, Antarctic dragonfish (2017)
** *Seriola dumerili*, Greater amberjack (2017)
** *Sillago sinica*, chinese sillago (2018)
** *Sparus aurata*, gilt-head bream (2018)
* Order Salmoniformes
** *Salmo salar*, Atlantic salmon (2016)
** *Oncorhynchus mykiss*, rainbow trout (2014)
** *Oncorhynchus tshawytscha*, Chinook salmon (2018)
* Order Scorpaeniformes
** *Sebastes schlegelii*, Black rockfish (2018)
* Order Siluriformes
** *Ictalurus punctatus*, channel catfish (2016)
* Order Tetraodontiformes
** *mola mola, o*cean sunfish (2016)
** *Takifugu rubripes*, a puffer fish (International Fugu Genome Consortium 2002)
** *Tetraodon nigroviridis*, a puffer fish (2004)

### Amphibians
* *Ambystoma mexicanum*, Axolotl (2018)
* *Xenopus tropicalis*, western clawed frog (2010)
* *Nanorana parkeri*, High Himalaya frog (2015)
* *Oophaga pumilio*, Strawberry poison-dart frog (2018)
* *[[American bullfrog|Rana [Lithobates] catesbeiana]]*, North American bullfrog (2017) 
* *Rhinella marina*, Cane toad (2018)
* *Vibrissaphora ailaonica*, Mustache toad (2019)
* *Leptobrachium leishanense*, Leishan Mustache toad (2019)

### Reptiles
* Order Crocodylia
** *Alligator mississippiensis*, American alligator (2012)
** *Alligator sinensis*, Chinese alligator (2013, 2014)
** *Crocodylus porosus*, salt water crocodile (2012))
** *Dopasia gracilis*, Burmese glass lizard, (2015)
** *Emydocephalus ijimae*, Ijima's turtle-headed sea snake, (2019)
** *Hydrophis melanocephalus*, slender-necked sea snake, (2019) 
** *Laticauda laticaudata*, blue-linged sea krait, (2019)
** *Pantherophis guttatus*, corn snake (2014)
** *Pogona vitticeps*, Australian dragon lizard (2015)
** *Python molurus bivittatus*, Burmese python (2013)
** *Salvator Merinae*, tegu lizard (2018)
** *Shinisaurus crocodilurus*, Chinese crocodile lizard, (2017)
* Order Testudines (Chelonii)
** *Chelonia mydas*, green sea turtle (2013)
** *Chrysemys picta bellii*, western painted turtle (2013)
** *Pelodiscus sinensis*, soft-shelled turtle (2013)

### Birds
* Order Accipitriformes
** *Haliaeetus albicilla*, white-tailed eagle (2014)
* Order Anseriformes
** *Anas platyrhynchos*, mallard duck (or wild duck) (2013)
* Order Apodiformes
** *Chaetura pelagica*, chimney swift (2014)
** *Himantopus novaezelandiae*, kakī/black stilt (2019)
* Order Coliiformes
** *Colius striatus*, speckled mousebird (2014)
** *Falco peregrinus*, peregrine falcon (2013)
***Gallus gallus*, chicken (2004)
***Meleagris gallopavo*, domesticated turkey (2011)
** *Numida meleagris*, helmeted guinea fowl (2019)
** *Pavo cristatus*, Indian peafowl (2018)
***Phasianus colchicus*, Common Pheasant (2019)
***Syrmaticus mikado*, mikado pheasant (2018)
***Tetrao tetrix*, black grouse (2014)
* Order Gaviiformes
** *Gavia stellata*, red-throated loon (2014
** *Corvus brachyrhynchos*, American crow (2014)
** *Eopsaltria australis*, Eastern yellow robin (2019)
** *Ficedula albicollis*, collared flycatcher (2012)
** *Ficedula hypoleuca*, pied flycatcher (2012)
** *Lonchura striata domestica*, Society finch (2018)
** *Manacus vitellinus*, golden-collared manakin (2014)
** *Manacus vitellinus*, golden-collared manakin (2014)
** *Pteridophora alberti*, king of saxony bird-of-paradise (2019)
** *Ptiloris paradiseus*, paradise riflebird (2019)
** *Taeniopygia guttata*, zebra finch (2010)
* Order Pelecaniformes
** *Egretta garzetta*, little egret (2014)
** *Amazona ventralis*, Hispaniolan amanzon (2019)
** *Ara macao*, Scarlet macaw (2013)
** *Cyanoramphus malherbi*, kākāriki karaka (2020)
** *Melopsittacus undulatus*, budgerigar (2014)
***Eudyptes chrysocome*, Western rockhopper penguin (2019) 
***Eudyptes chrysolophus chrysolophus*,  Macaroni penguin (2019) 
***Eudyptes chrysolophus schlegeli*, Royal penguin (2019) 
***Eudyptes filholi*, Eastern rockhopper penguin (2019) 
***Eudyptes moseleyi*, Northern rockhopper penguin (2019) 
***Eudyptes pachyrhynchus*, Fiordland-crested penguin (2019) 
***Eudyptes robustus*, Snares-crested penguin (2019) 
***Eudyptes sclateri*, Erect-crested penguin (2019) 
***Eudyptula minor albosignata*, white-flippered penguin (2019) 
***Eudyptula minor minor*, little blue penguin (2019) 
***Eudyptula novaehollandiae*, fairy penguin (2019)
***Megadyptes antipodes antipodes*, yellow eyed penguin or hoiho (2019) 
***Pygoscelis adeliae*, Adélie penguin (2014)
***Pygoscelis papua*, gentoo penguin (2019)
***Spheniscus demersus*, African penguin (2019) 
***Spheniscus magellanicus*, Magellanic penguin (2019) 
***Spheniscus mendiculus*, Galápagos penguin (2019) 
* Order Strigiformes
** *Tyto alba*, barn owl (2014)
** *Strix varia*, Barred owl (2017)
** *Phalacrocorax brasilianus*, Neotropic cormorant (2017)
* Subclass Theria (marsupials and placental mammals)
** Infraclass Metatheria (marsupials)
*** Order Didelphimorphia, Family Didelphidae (opossums)
**** *Monodelphis domestica*, gray short-tailed opossum (2007)
*** Order Dasyuromorphia
**** Family Dasyuridae
***** *Sarcophilus harrisii*, Tasmanian devil ()
**** Family Thylacinidae
***** *Thylacinus cynocephalus*, thylacine ()
*** Order Diprotodontia
**** Family Macropodidae
***** *Macropus eugenii*, tammar wallaby (2011)
**** Family Phascolarctidae
***** *Phascolarctos cinereus*, koala (2013 draft)
*** 
** Infraclass Eutheria (placental mammals)

**# Order Erinaceomorpha, Family Erinaceidae
**#* *Erinaceus europaeus*, European hedgehog 
**# Order Eulipotyphla, Family Solenodontidae
**##*Solenodon Parodoxus*, Hispaniolan solenodon (2018)
**#Order Chiroptera
**#* Family Megadermatidae
**#** *Megaderma lyra*, greater false vampire bat (2013)
**#* Family Mormoopidae
**#** *Pteronotus parnellii*, Parnell's mustached bat (2013)
**#** *Eidolon helvum*, Old World fruit bat (2013)
**#* Family Phyllostomidae
**#***Leptonycteris yerbabuenae*, long nosed bat (2020)
**#** *Leptonycteris nivalis*, greater long nosed bat (2020)

**#* Family Cercopithecidae
**#** *Macaca mulatta*, rhesus macaque (2007 & Chinese rhesus macaque *Macaca mulatta lasiota* in 2011)
**#** *Macaca fascicularis*, Cynomolgus or crab-eating macaque (2011)
**#* Family Hominidae
**#** Subfamily Ponginae
**#*** *Pongo pygmaeus*/*Pongo abelii*, orangutan (Borneo/Sumatra) (2011)
**#** Subfamily Homininae
**#*** *Gorilla gorilla*, western gorilla (2012)
**#*** *Homo sapiens*, modern human (draft 2001 91%-96% complete)
**#*** *Homo neanderthalensis*, Neanderthal (draft 2010)
**#*** *Pan troglodytes*, chimpanzee (2005)
**#*** *Pan paniscus*, bonobo (2012)

**#* Family Callitrichidae
**#** *Callithrix jacchus*, marmoset (2010, whole genome 2014)
**# Order Carnivora
**#* Family Felidae
**#** *Acinonyx jubatus*, African cheetah (2015)
**#** *Felis silvestris catus*, cat (2007)
**#** *Panthera leo*, lion (2013*)*
**#** *Panthera tigris altaica*, Amur tiger (or Siberian tiger) (2013)
**#** *Panthera tigris tigris*, Bengal tiger (2013)
**#** *Canis lupus lupus*, wolf (2017).
**#** *Lycaon pictus*, african wild dog (2018)
**#* Family Ursidae
**#** *Ailuropoda melanoleuca*, giant panda (2010)
**#** *Ursus arctos ssp. horribilis*, Grizzly bear (2018)
**#** *Ursus americanus*, American black bear (2019)
**#** *Ursus maritimus*, Polar bear (2014)
**#* Family Odobenidae
**#** *Odobenus rosmarus*, walrus (2015)
**#* Family Mustelidae
**#** *Enhydra lutris* *kenyoni*, sea otter (2017)
**#** *Mustela erminea*, stoat (2018)
**#** *Mustela putorius furo*, ferret (2014)
**#** *Pteronura brasiliensis*, giant otter (2019)
**# Order Cetacea
**#* Family Delphinidae
**#** *Tursiops truncatus*, bottlenosed dolphin (2012)
**#** *Balaenoptera physalus*, fin whale (2014)
**#* Family Monodontidae
**#** *Delphinapterus*, beluga whale (2017)
**#* Family Physeteridae
**#** *Physeter macrocephalus*, sperm whale (2019)
**# Order Proboscidea, Family Elephantidae
**#* *Elephas maximus*, Asian elephant (2015)
**#* *Loxodonta africana*, African elephant (2009)
**# Order Sirenia (sea cows)
**#* Family Trichechidae
**#** *Trichechus manatus*, West Indian manatee (2015 2018)
**# Order Artiodactyla (even-toed ungulates)
**#* Family Antilocapridae
**#** *Antilocapra americana*, Pronghorn (2019)
**#* Family Suidae
**#** *Sus scrofa*, pig (2012)
**#* Family Bovidae
**#** *Ammotragus lervia*, Barbary sheep (2019)
**#** *Bos grunniens*, yak 2012 ()
**#** *Bos primigenius indicus*, zebu or Brahman cattle (2012)
**#** *Bos primigenius taurus*, cow 2009 ()
**#** *Bubalus bubalis*, river buffalo (2017)
**#** *Capra ibex*, Goats (2019)
**#** *Kobus ellipsiprymnus*, Waterbuck (2019)
**#** *Ourebia ourebi*, Oribi (2019)
**#** *Nanger granti, *Grant's gazelle (2019)
**#** *Muntiacus crinifrons*, hairy-fronted muntjac (2019)
**#* Family Giraffidae
**#** *Giraffa camelopardalis*, Giraffe (2019)
**#** *Okapia johnstoni*, Okapi (2019)
**#** *Moschus chrysogaster*, Alpine musk deer (2019)
**#* Family Cricetidae
**#** *Peromyscus leucopus*, white-footed mouse (2019)
**#* Family Muridae
**#** *Mastomys coucha*, Southern multimammate mouse (2019) 
**#** *Mus musculus* Strain: C57BL/6J, mouse (2002)
**#** *Rattus norvegicus*, rat (2004)

**# Order Lagomorpha
**#* Family Leporidae
**#** *Oryctolagus cuniculus*, European rabbit (2010)

## References