High-throughput next generation sequencing
Subtitle: methods and applications
By: edited by Young Min Kwon, Steven C. Ricke
Series: Methods in molecular biology -- 733; Springer protocols; Methods in molecular biology (Clifton, N.J.) -- v. 733; Springer protocols
Publisher: Springer
Published: 2011
Place of publication: New York
Language: eng
Number of pages: 308
ISBN-13: 9781617790881; 9781617790898
Subjects: Gene Expression Profiling; Gene mapping; Laboratory manuals; Genomes; Analysis; Genome; Metagenomics; Gene expression
Notes: Includes bibliographical references and index.
Table of contents: title: Helicos single-molecule sequencing of bacterial genomes  -- Kathleen E. Steinmann ... [et al.]; title: Whole-genome sequencing of unculturable bacterium using whole-genome amplification  -- Yuichi Hongoh and Atsushi Toyoda; title: RNA sequencing and quantitation using the helicos genetic analysis system  -- Tal Raz ... [et al.]; title: Transcriptome profiling using single-molecule direct RNA sequencing  -- Fatih Ozsolak and Patrice M. Milos; title: Discovery of bacterial sRNAs by high-throughput sequencing  -- Jane M. Liu and Andrew Camilli; title: Identification of virus encoding microRNAs using 454 FLX sequencing platform  -- Byung-Whi Kong; title: Ribosomal RNA depletion for massively parallel bacterial RNA-sequencing applications  -- Zhoutao Chen and Xiaoping Duan; title: Integrating high-throughput pyrosequencing and quantitative real-time PCR to analyze complex microbial communities  -- Husen Zhang ... [et al.]; title: Tag-encoded FLX amplicon pyrosequencing for the elucidation of microbial and functional gene diversity in any environment  -- Yan Sun, Randall D. Wolcott, and Scot E. Dowd; title: Pyrosequencing of chaperonin-60 (cpn60) amplicons as a means of determining microbial community composition  -- John Schellenberg ... [et al.]; title: Prescreening of microbial populations for the assessment of sequencing potential  -- Irene B. Hanning and Steven C. Ricke; title: Metagenomics  -- Jack A. Gilbert ... [et al.]; title: Metagenomic analysis of intestinal microbiomes in chickens  -- Taejoong Kim and Egbert Mundt; title: Gene expression profiling : metatranscriptomics  -- Jack A. Gilbert and Margaret Hughes; title: High-throughput insertion tracking by deep sequencing for the analysis of bacterial pathogens  -- Sandy M.S. Wong ... [et al.]; title: Determining DNA methylation profiles using sequencing  -- Suhua Feng ... [ et al.]; title: Preparation of next-generation sequencing libraries using Nextera technology : simultaneous DNA fragmentation and adaptor tagging by in vitro transposition  -- Nicholas Caruccio; title: Amplification-free library preparation for paired-end illumina sequencing  -- Iwanka Kozarewa and Daniel J. Turner; title: Target-enrichment through amplification of hairpin-ligated universal targets for next-generation sequencing analysis  -- Pallavi Singh, Rajesh Nayak, and Young Min Kwon; title: 96-plex molecular barcoding for the illumina genome analyzer -- Iwanka Kozarewa and Daniel J. Turner.