Microarray analysis of the physical genome
Subtitle: methods and protocols
By: edited by Jonathan R. Pollack
Series: Methods in molecular biology -- v. 556; Springer protocols; Methods in molecular biology (Clifton, N.J.) -- v. 556.; Springer protocols
Publisher: Humana
Published: 2009
Place of publication: New York
Language: eng
Number of pages: 223
ISBN-13: 9781603271912; 9781603271929
Notes: Includes bibliographical references and index.
Table of contents: title: DNA microarray technology. Introduction / J.R. Pollack; title: Comparative genomic hybridization on BAC arrays / B.P. Coe ... [et al.]; title: Comparative genomic hybridization on spotted oligonucleotide microarrays / Y.H. Kim and J.R. Pollack; title: Comparative genomic hybridization by representational oligonucleotide microarray analysis / R. Lucito and J. Byrnes; title: Application of oligonucleotides arrays for coincident comparative genomic hybridization, ploidy status and loss of heterozygosity studies in human cancers / J.K. Cowell and K.C. Lo; title: Molecular inversion probe assay for allelic quantitation / H. Ji and K. Welch; title: A whole-genome amplification protocol for a wide variety of DNAs, including those from formalin-fixed and paraffin-embedded tissue / P.L. Paris; title: Algorithms for calling gains and losses in array CGH data / P. Wang; title: Methylation analysis by microarray / D.E. Deatherage ... [et al.]; title: Methylation analysis by DNA immunoprecipitation (MeDIP) / E.A. Vucic ... [et al.]; title: Combining chromatin immunoprecipitation and oligonucleotide tiling arrays (ChIP-Chip) for functional genomic studies / J. Eeckhoute, M. Lupien and M. Brown; title: ChIP-Chip: algorithms for calling binding sites / X.S. Liu and C.A. Meyer; title: Mapping regulatory elements by DNaseI hypersensitivity chip (DNase-Chip) / Y. Shibata and G.E. Crawford; title: Microarray analysis of DNA replication timing / N. Karnani, C.M. Taylor and A. Dutta; title: Integration of diverse microarray data types / K. Salari and J.R. Pollack.