Chromatin remodeling
Subtitle: methods and protocols
By: edited by Randall H. Morse
Series: Methods in molecular biology -- 833; Springer protocols; Methods in molecular biology (Clifton, N.J.) -- v. 833.; Springer protocols
Publisher: Humana Press
Published: 2012
Place of publication: New York
Language: eng
Number of pages: 453
ISBN-13: 9781617794766; 9781617794773
Subjects: Chromatin Assembly and Disassembly; Laboratory manuals; Chromatin; Laboratory Manuals; Structure
Notes: Includes bibliographical references and index.
Table of contents: title: Strain construction and screening methods for a yeast histone H3/H4 mutant library / Junbiao Dai and Jef D. Boeke; title: Measuring dynamic changes in histone modifications and nucleosome density during activated transcription in budding yeast / Chhabi K. Govind, Daniel Ginsburg, and Alan G. Hinnebusch; title: Monitoring the effects of chromatin remodelers on long-range interactions in vivo / Christine M. Kiefer and Ann Dean; title: Measuring nucleosome occupancy in vivo by micrococcal nuclease / Gene O. Bryant; title: Analysis of nucleosome positioning using a nucleosome-scanning assay / Juan Jose Infante, G. Lynn Law, and Elton T. Young; title: Assaying chromatin structure and remodeling by restriction enzyme accessibility / Kevin W. Trotter and Trevor K. Archer; title: Generation of DNA circles in yeast by inducible site-specific recombination / Marc R. Gartenberg; title: An efficient purification system for native minichromosome from Saccharomyces cerevisiae / Ashwin Unnikrishnan ... [et al.]; title: Simultaneous single-molecule detection of endogenous C-5 DNA methylation and chromatin accessibility using MAPit / Russell P. Darst ... [et al.]; title: Analysis of stable and transient protein-protein interactions / Stephanie Byrum ... [et al.]; title: Monitoring dynamic binding of chromatin proteins in vivo by fluorescence recovery after photobleaching / Florian Mueller ... [et al.]; title: Monitoring dynamic binding of chromatin proteins in vivo by fluorescence correlation spectroscopy and temporal image correlation spectroscopy / Davide Mazza ... [et al.]; title: Analysis of chromatin structure in plant cells / Mala Singh ... [et al.]; title: Analysis of histones and histone variants in plants / Ila Trivedi ... [et al.]; title: Reconstitution of modified chromatin templates for in vitro functional assays / Miyong Yun ... [et al.]; title: A defined in vitro system to study ATP-dependent remodeling of short chromatin fibers / Verena K. Maier and Peter B. Becker; title: In vitro reconstitution of in vivo-like nucleosome positioning on yeast DNA / Christian J. Wippo and Philipp Korber; title: Activator-dependent acetylation of chromatin model systems / Heather J. Szerlong and Jeffrey C. Hansen; title: Mapping assembly favored and remodeled nucleosome positions on polynucleosomal templates / Hillel I. Sims, Chuong D. Pham, and Gavin R. Schnitzler; title: Analysis of changes in nucleosome conformation using fluorescence resonance energy transfer / Tina Shahian and Geeta J. Narlikar; title: Preparation of nucleosomes containing a specific H2A-H2A cross-link forming a DNA-constraining loop structure / Ning Liu and Jeffrey J. Hayes; title: Sulfyhydryl-reactive site-directed cross-linking as a method for probing the tetrameric structure of histones H3 and H4 -/ Andrew Bowman and Tom Owen-Hughes; title: Genomic approaches for determining nucleosome occupancy in yeast Kyle Tsui ... [et al.]; title: Genome-wide approaches to determining nucleosome occupancy in metazoans using MNase-Seq / Kairong Cui and Keji Zhao; title: Salt fractionation of nucleosomes for genome-wide profiling / Sheila S. Teves and Steven Henikoff; title: Quantitative analysis of genome-wide chromatin remodeling / Songjoon Baek, Myong-Hee Sung, and Gordon L. Hager; title: Computational analysis of nucleosome positioning / Itay Tirosh.