Pseudogenes
Subtitle: functions and protocols
By: edited by Laura Poliseno, Istituto Toscano Tumori, Pisa, Italy
Series: Methods in molecular biology -- 1167; Springer protocols; Methods in molecular biology (Clifton, N.J.) -- v. 1167.; Springer protocols (Series)
Publisher: Humana Press
Published: 2014
Place of publication: New York
Language: eng
Number of pages: 319
ISBN-13: 9781493908349; 9781493908356
Copyright date: 2014
Subjects: Molecular genetics; Pseudogenes; Genes
Notes: Includes bibliographical references and index.
Table of contents: title: Pseudogene redux with new biological significance  -- Leonardo Salmena; title: Contribution of pseudogenes to sequence diversity  -- Mauno Vihinen; title: Computational methods for pseudogene annotation based on sequence homology  -- Paul M. Harrison; title: Computational methods of identification of pseudogenes based on functionality : entropy and GC content  -- Evgeniy S. Balakirev ... [et al.]; title: Methods of identification of pseudogenes based on functionality : hybridization of 18S rRNA and mRNA during translation  -- Chuanhua Xing; title: Whole-genome identification of neutrally evolving pseudogenes using the evolutionary measure dN/dS  -- Lise Olivia Andrieux and David Torrents Arenales; title: Methods to study the occurrence and the evolution of pseudogenes through a phylogenetic approach  -- Jacques Dainat and Pierre Pontarotti; title: Methods for detecting transcribed pseudogenes : PCR on regions of high sequence similarity followed by cloning and sequencing ; title: Wenyong Ding and Jianwu Dai; title: RNA amplification for pseudogene detection using RNA-Seq  -- Stephen C. M. Tsoi and Michael K. Dyck; title: GENCODE pseudogenes  -- Adam Frankish and Jennifer Harrow; title: Methods to detect transcribed pseudogenes : RNA-Seq discovery allows learning through features  -- Camilo Valdes and Enrico Capobianco; title: Proteomics techniques for the detection of translated pseudogenes  -- Nadia Ucciferri and Silvia Rocchiccioli; title: Pseudogenes as competitive endogenous RNAs : target prediction and validation  -- Florian A. Karreth ... [et al.]; title: Pseudogenes : a novel source of trans-acting antisense RNAs  -- Per Johnsson, Kevin V. Morris, and Dan Grandér; title: Pseudogene-derived endogenous siRNAs and their function  -- Wen-Ling Chan and Jan-Gowth Chang; title: Methods to study translated pseudogenes : in vitro translation, fusion with a tag/reporter gene, and complementation assay -- Anne Parle-McDermott